GENSCAN 1.0	Date run:  5-Nov-116	Time: 12:09:29

Sequence gi568815584f:77718979_78033388 : 314410 bp : 45.40% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.14 Intr -   1850   1733  118  1  1   55   82   154 0.225  11.97
 1.13 Intr -   4326   4203  124  1  1   13   92    69 0.482  -0.56
 1.12 Intr -  12151  12010  142  1  1   42   86    61 0.767   1.23
 1.11 Intr -  13623  13507  117  0  0  101   81   133 0.987  14.56
 1.10 Intr -  16034  15969   66  2  0  122   86    15 0.933   3.80
 1.09 Intr -  17028  16959   70  2  1   91   61    10 0.994  -2.22
 1.08 Intr -  18097  17993  105  0  0   91  108    61 0.989   7.73
 1.07 Intr -  19906  19800  107  1  2   91   76    69 0.998   5.01
 1.06 Intr -  20083  19988   96  1  0   65   78   100 0.932   6.91
 1.05 Intr -  32502  32341  162  0  0   53   84   203 0.977  16.57
 1.04 Intr -  36142  35989  154  0  1   93   73    21 0.669   1.17
 1.03 Intr -  42305  42136  170  2  2   21   94    77 0.002   0.34
 1.02 Intr -  69784  69594  191  2  2   92   72    82 0.338   6.30
 1.01 Init -  81355  81259   97  1  1   72   50    88 0.135   1.88
 1.00 Prom -  86617  86578   40                              -3.86

 2.00 Prom +  97270  97309   40                              -7.26
 2.01 Init + 100001 100135  135  1  0  113   90   171 0.769  17.97
 2.02 Intr + 103457 103540   84  1  0   83  115   109 0.999  13.12
 2.03 Intr + 106898 107050  153  1  0  110  103    38 0.926   7.77
 2.04 Intr + 112135 112249  115  0  1   31   72    45 0.272  -2.78
 2.05 Intr + 115695 115819  125  1  2   40  110    93 0.477   7.00
 2.06 Intr + 140098 140301  204  0  0  113   65   298 0.726  29.40
 2.07 Intr + 141449 141494   46  1  1   84  101    52 0.764   4.08
 2.08 Intr + 145101 145240  140  1  2  109   42    17 0.351  -0.62
 2.09 Intr + 148746 148827   82  2  1  108  106    68 0.717   9.81
 2.10 Intr + 158368 158459   92  2  2   44   84    22 0.025  -2.89
 2.11 Intr + 168113 168271  159  1  0   95   78   148 0.568  14.68
 2.12 Intr + 180122 180280  159  1  0   75  100   191 0.725  19.18
 2.13 Intr + 188825 188941  117  1  0  115   78   192 0.593  21.56
 2.14 Intr + 205479 205628  150  2  0  106   75   179 0.724  18.76
 2.15 Intr + 206786 206983  198  1  0   71   75   234 0.999  19.95
 2.16 Intr + 212540 212733  194  1  2   78   61   311 0.856  25.69
 2.17 Intr + 214242 214371  130  0  1  115  -11   145 0.786   8.00
 2.18 Intr + 214484 214666  183  1  0   89   84    50 0.712   4.68
 2.19 Intr + 217717 217772   56  0  2  110   92     3 0.142   0.68
 2.20 Term + 220955 221009   55  2  1  112   48    46 0.080   0.03
 2.21 PlyA + 223045 223050    6                               1.05

 3.06 PlyA - 223057 223052    6                               1.05
 3.05 Term - 226222 226118  105  1  0   96   42    54 0.282   0.01
 3.04 Intr - 237872 237742  131  0  2   39  115    77 0.770   5.91
 3.03 Intr - 249010 248801  210  2  0   94  103    66 0.950   7.58
 3.02 Intr - 250555 250467   89  0  2   81   99    42 0.935   4.21
 3.01 Init - 259862 259762  101  2  2   78   77    75 0.545   5.19
 3.00 Prom - 290811 290772   40                              -3.66

 4.03 PlyA - 290954 290949    6                               1.05
 4.02 Term - 295398 294885  514  2  1   43   36   244 0.583   8.52
 4.01 Intr - 310522 310379  144  0  0   59   80   126 0.841   8.30

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init - 163333 163240   94  1  1   83   93    69 0.812   7.58


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815584f:77718979_78033388|GENSCAN_predicted_peptide_1|573_aa
MGLSLPAPRAAAQPEQRPTPGVSMPVPSRSRRGDLWQCLETFVIVMTWEMLLASSGQRSS
VLLDILQCTELAFTTKNCPVPNVNSITVEKPWSIYQNTNGTPVQRTTNPRRPFRPERLRI
AHSFLSAPHHLERPAQRCCRSRWKKRKKMALTSFLPAPTQLSQDQLEAEEKARSQRSRQT
SLVSSRREPPPYGYRKGWIPRLLEDFGDGGAFPEIHVAQYPLDMGRKKKMSNALAIQVDS
EGKIKYDAIARQGQSKDKVIYSKYTDLVPKEVMNADDPDLQRPDEEAIKEITEKTRVALE
KSVSQKVAAAMPVRAADKLAPAQYIRYTPSQQGVAFNSGAKQRVIRMVEMQKDPMEPPRF
KINKKIPRGPPSPPAPVMHSPSRKMTVKEQQEWKIPPCISNWKNAKGYTIPLDKRLAADG
RGLQTVHINENFAKLAEALYIADRKAREAVEMRAQVERKMAQKEKEKHEEKLREMAQKAR
ERRAGIKTHVEKVKYFSTVHTEDGEARERDEIRHDRRKERQHDRNLSRAAPDKRSKLQRN
ENRDISEVIALGVPNPRTSNEVQYDQRLFNQSK

>gi568815584f:77718979_78033388|GENSCAN_predicted_CDS_1|1719_bp
atggggctgtccctcccggcgcccagggcggctgcacaaccggagcagaggccgactccc
ggcgtgtccatgccggttccctcgcgctccaggcgcggggatctttggcaatgtctggag
acatttgtgattgtcatgacttgggagatgctactggcatctagtgggcagaggtcaagt
gtgttgttggacatcttacaatgcacagaactggccttcacaacaaagaactgtccagtt
ccaaatgtcaacagtatcactgtggagaaaccctggtcaatctatcagaatacaaacggt
actcctgttcaaagaactacaaatcccagaaggccttttcggccagagcgcctgcgcatc
gcgcactccttcctttccgctcctcatcatctggaaagacccgcccagcggtgctgtcgc
tcgcgctggaagaagcggaagaagatggcgctcaccagctttttacctgcacctactcag
ctatctcaggaccagcttgaggctgaagaaaaggcaagatcccagagatcacggcagacc
tcactggtctcctcccgaagagaacctcccccgtacggataccggaaaggctggatacct
cggttattagaggattttggagatggaggtgcttttccagagatccatgtggcccagtat
ccactggatatgggacgaaagaaaaaaatgtcgaatgcgctggccattcaggtggattct
gaaggaaaaattaaatatgatgcaattgctcgacaaggacagtcaaaagacaaggtcatt
tatagcaaatacactgacctggttccaaaggaggttatgaatgcagatgatccagacctg
caaaggcccgatgaagaagctattaaagagataacagaaaagacaagagtagccttagaa
aaatctgtatcacagaaggtcgccgcagccatgccagttcgagcagctgacaaattggct
cctgctcagtatatccgatacacaccatctcagcaaggagtggcattcaactctggagct
aaacagagggttattcggatggtagaaatgcagaaagatccaatggagcctccaaggttc
aagattaataagaaaattccccggggaccaccttctcctcctgcgcctgtcatgcattct
cctagccgaaagatgactgtaaaggaacaacaagagtggaagattcctccttgtatttct
aactggaaaaatgcaaagggttatacaattccattagacaaacgtctggctgctgatgga
agaggactacagacagtacacataaatgaaaatttcgccaaattggcagaagccctctac
attgctgatcggaaggctcgtgaagctgtggaaatgcgtgcccaagtagagagaaaaatg
gctcagaaagaaaaggaaaaacatgaagagaaacttagagaaatggcccagaaagccagg
gagagaagagctgggatcaaaactcatgtggaaaaagtgaagtacttttcaactgttcac
acagaggatggggaggcacgtgagagggatgaaatccggcatgacaggcgaaaagagaga
cagcatgaccggaatctttccagggcagctcctgataagaggtcgaaacttcagagaaat
gaaaatcgggatatcagtgaagttattgctctcggtgttcctaatcctcggacttccaat
gaagttcagtatgaccaaaggctcttcaaccaatccaag

>gi568815584f:77718979_78033388|GENSCAN_predicted_peptide_2|858_aa
MARKALKLASWTSMALAASGIYFYSNKYLDPNDFGAVRVGRAVATTAVISYDYLTSLKSV
PYGSEEYLQLRSKLTGAMGLGIHWCNILRRACRLGHRGKASALRNLQRRQAMGVKKTVAC
HVSHADMAGQASQLGDCLLEEEGAENQCFADKQIPNREERGRAHSSSRVHVCSSLTYVGC
LDTWVGFLLLQSCPPVAPTTWFYRVHLRSARRLCELCCANRGTFIKVGQHLGALDYLLPE
EYTSTLKVLHSQAPQSSMQEIRQVIREDLGKEGAGTDYWSLNVELAPGELILQLPIVRRD
KRMLQVLCVLDAPSDWSFNENEGERRCRGTVVQRACTLSVPCSRPVSCTLNPGVTMFYVI
LANGAAVSEECCALWMQEQLRVVGKGLWGFVRIHDLFQSFDDTPLGTASLAQVHKAVLHD
GRTVAVKVQHPKVRAQSSKDILLMEVLVLAVKQLFPEFEFMWLVDEAKKNLPLELDFLNE
GRNAEKVSQMLRHFDFLKVPRIHWDLSTERVLLMEFVDGGQVNDRDYMERNKIDVNEISR
HLGKMYSEMIFVNGFVHCDPHPGNVLVRKHPGTGKAEIVLLDHGLYQMLTEEFRLNYCHL
WQSLIWTDMKRVKEYSQRLGAGDLYPLFACMLTARSWDSVNRGISQAPVTATEDLEIRNN
AANYLPQISHLLNHVPRQMLLILKTNDLLRGIEAALGTRASASSFLNMSRCCIRALAEHK
KKNTCSFFRRTQISFSEAFNLWQINLHELILRVKGLKLADRLLHFCHIVARSPRVTVHVT
ILLLLWNPLRTLWPLSQGPQAELWHSSLFFSKKTQQPTFPFLVEGRGILTLAHLVQSLSD
MCLPEKEEMQLMNPTCGH

>gi568815584f:77718979_78033388|GENSCAN_predicted_CDS_2|2577_bp
atggccagaaaggctctcaagcttgcttcgtggaccagcatggctcttgctgcctctggc
atctacttctacagtaacaagtacttggaccctaatgactttggcgctgtcagggtgggc
agagcagttgctacgacggctgtcatcagttacgactacctcacttccctgaagagtgtc
ccttatggctcagaggagtacttgcagctgagatctaagctaaccggtgctatgggcctt
ggcatccactggtgtaacattctacggagagcttgcaggctcggacacaggggcaaggcc
tctgctttacggaatctgcagaggaggcaggcgatgggtgtcaaaaagacagttgcctgt
cacgtgtcacatgcagacatggctggacaagcctctcagttgggggactgcctcttagag
gaggaaggagctgaaaatcaatgctttgcagataagcagatcccaaacagagaggagaga
ggaagggcacacagttcctctcgtgtgcatgtctgcagctccctcacctatgtgggctgc
ctggacacatgggtgggcttcctgctacttcagagctgccctccagttgcccctaccacc
tggttctacagggtgcaccttcgctctgccaggcgtctctgtgagctctgctgtgccaac
cggggcaccttcatcaaggtgggccagcacctgggggctctggactacctgttgccagag
gagtacaccagcacgctgaaggtactgcacagccaggctccacagagcagcatgcaagag
atccgccaggtcatccgagaagatctgggcaaggagggagctggcactgactattggtcc
cttaatgtggagctggccccaggggaacttattttacagctccccatagtacgtagggac
aagcgtatgctgcaggtgctctgtgttcttgatgcaccatctgactggagtttcaatgag
aatgaaggagagagaaggtgcaggggtaccgttgtgcaacgggcctgtaccctgtctgtg
ccctgctcccggcctgtgtcctgcaccttgaatcctggtgtcaccatgttctatgtcatc
ctggcaaatggagctgctgtaagtgaagaatgctgtgctttgtggatgcaggaacaactg
agggttgtcggaaaaggcctttggggttttgtgaggatccatgatttgttccagagcttc
gatgacacccctctggggacggcctccctggcccaggtccacaaggcagtgctgcatgat
gggcggacggtggccgtgaaggtccagcacccaaaggtgcgggctcagagctcgaaggac
attctcctgatggaggtgctcgttctggctgtgaagcagctgttcccagagtttgagttt
atgtggcttgtggatgaagccaagaagaacctgcctttggagctggatttcctcaatgaa
gggaggaatgctgagaaggtgtcccagatgctcaggcattttgacttcttgaaggtcccc
cgaatccactgggacctgtccacggagcgggtcctcctgatggagtttgtggatggcggg
caggtcaatgacagagactacatggagaggaacaagatcgacgtcaatgagatctcacgc
cacctgggcaagatgtatagtgagatgatcttcgtcaatggcttcgtgcactgcgatccc
caccccggcaatgtactggtgcggaagcaccccggcacgggaaaggcggagattgtcctg
ttggaccatgggctttaccagatgctcacggaagaattccgcctgaattactgccacctc
tggcagtctctgatctggactgacatgaagagagtgaaggagtacagccagcgactggga
gccggggatctctaccccttgtttgcctgcatgctgacggcgcgatcgtgggactcggtc
aacagaggcatcagccaagctcccgtcactgccactgaggacttagagattcgcaacaac
gcggccaactacctcccccagatcagccatctcctcaaccacgtgccgcgccagatgctg
ctcatcttgaagaccaacgacctgctgcgtggcattgaggccgccctgggcacccgcgcc
agcgccagctcctttctcaacatgtcacgttgctgcatcagagcgctagctgagcacaag
aagaagaatacctgttcattcttcagaaggacccagatctctttcagcgaggccttcaac
ttatggcagatcaacctccatgagctcatcctgcgtgtgaaggggttgaagctggctgac
cggctgctccatttttgccacatcgtggcccgcagccccagagtcactgtccatgtcacc
atccttctcctcctttggaatcctctccgcacactgtggcccttgtctcagggcccacaa
gctgaactgtggcatagctctctcttcttctccaagaagactcagcagcctacattccca
ttcctggtggagggaagaggaattctgaccctggcccatttggtccagagcctctcagat
atgtgtcttccagagaaggaagaaatgcagctcatgaaccccacctgtgggcattag

>gi568815584f:77718979_78033388|GENSCAN_predicted_peptide_3|211_aa
MTTNFGVLDHLVASGMSLGPGNSGKKEKQEDAERISGLKRQTRNAFIITSTVTSAELRPL
LIPGLWEAFCEVFCEGPSTCHGFSKSLSRICDVSHPVLGAVGLCDGDGSGDSKQSTGCGP
CHQGSSNSDGLVTSWFRNSATVIAVRGSRNRVTFPEEVKQRGMRNITQASTVLEVYKTYE
DFPLDFSRLSQFPDGSRALKDNSCNAQGSFS

>gi568815584f:77718979_78033388|GENSCAN_predicted_CDS_3|636_bp
atgaccacaaattttggagtcctagaccatctggtagcatcaggaatgtccctagggcct
ggaaatagtggcaagaaggagaaacaggaagatgcagaaaggatttcagggctgaaaaga
caaacaaggaatgcgttcataatcaccagcacagtcacctctgccgagctgcgaccactg
ctaattccagggttatgggaagccttttgtgaagtcttctgtgaagggccatcgacatgt
catggtttcagcaagagtttgtccaggatttgtgatgtgtctcatccagtgctaggtgct
gtgggcctgtgtgatggtgatggcagtggggacagcaaacagagcacaggttgtggtcct
tgtcatcaaggatcttccaattcagatggtttggtcacatcatggttcaggaacagtgct
actgtgattgctgtgcgcggaagtcgtaatagagtcaccttccctgaagaggttaagcag
agaggaatgaggaacatcacccaggcaagcacagtgttagaggtttacaagacatatgaa
gattttcctctagacttctccaggctctcacagttcccagatggatccagggcccttaaa
gataatagctgcaatgctcagggctctttcagttaa

>gi568815584f:77718979_78033388|GENSCAN_predicted_peptide_4|219_aa
XTQQKQAIETRKNSSHPYTPEEAIKPSYEPLIPAESSLYLEEKNVLILREVWRERREREP
GLCAALVGQLEFRVGLGLAGPTLRAAGQPCWPQAMRDLAPRPVAAEGVLGPPSSASPPAL
RSISHRALAAFPRGRAPDLQPAMPEPPTYSMGSGAAQASPTSSTPCSTAPSPIDHPRAEE
CERTARDWQAAPPAALLQDPLGEASWDPESGGEVDSLYV

>gi568815584f:77718979_78033388|GENSCAN_predicted_CDS_4|660_bp
nngacacagcagaagcaggccatcgaaactagaaagaattcttctcatccctacacccca
gaagaggccataaaacccagctatgagccactcattccagcagagtcctccctgtacctg
gaagaaaagaatgttcttatcctcagagaggtgtggagggagaggcgcgagcgggaaccg
gggctgtgtgcggcgcttgtgggccagctggagtttcgagtgggcttgggcttggcgggc
cccacactcagagcagccggccagccctgctggccccaggcaatgagggacttagcaccc
aggccagtggctgcggagggtgtactgggtccccccagcagtgccagcccaccggcgctg
cgctcgatttctcaccgagccttagctgccttcccgcggggcagggctccagacctgcag
cctgccatgcctgagcctcccacctactccatgggctccggtgcggcccaagcctccccg
acgagcagcaccccctgctccacagcgcccagtcccatcgaccacccaagggctgaggag
tgcgagcgcacggcgcgggactggcaggcagctccacctgcagccctgttgcaggatcca
ctaggtgaagccagctgggatcctgagtctggtggggaggtggatagtctttatgtctag