Result of FASTA (ccds) for pF1KB6650
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB6650, 446 aa
  1>>>pF1KB6650 446 - 446 aa - 446 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 12.7013+/-0.00137; mu= -16.2660+/- 0.081
 mean_var=447.6417+/-94.281, 0's: 0 Z-trim(110.1): 23  B-trim: 108 in 1/52
 Lambda= 0.060619
 statistics sampled from 11337 (11350) to 11337 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.693), E-opt: 0.2 (0.349), width:  16
 Scan time:  2.950

The best scores are:                                      opt bits E(32554)
CCDS11538.1 CALCOCO2 gene_id:10241|Hs108|chr17     ( 446) 3011 277.9 1.4e-74
CCDS58559.1 CALCOCO2 gene_id:10241|Hs108|chr17     ( 470) 2582 240.4 2.9e-63
CCDS58558.1 CALCOCO2 gene_id:10241|Hs108|chr17     ( 467) 2581 240.3   3e-63
CCDS58561.1 CALCOCO2 gene_id:10241|Hs108|chr17     ( 374) 2494 232.7   5e-61
CCDS58560.1 CALCOCO2 gene_id:10241|Hs108|chr17     ( 404) 1769 169.3 6.5e-42


>>CCDS11538.1 CALCOCO2 gene_id:10241|Hs108|chr17          (446 aa)
 initn: 3011 init1: 3011 opt: 3011  Z-score: 1452.4  bits: 277.9 E(32554): 1.4e-74
Smith-Waterman score: 3011; 100.0% identity (100.0% similar) in 446 aa overlap (1-446:1-446)

               10        20        30        40        50        60
pF1KB6 MEETIKDPPTSAVLLDHCHFSQVIFNSVEKFYIPGGDVTCHYTFTQHFIPRRKDWIGIFR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 MEETIKDPPTSAVLLDHCHFSQVIFNSVEKFYIPGGDVTCHYTFTQHFIPRRKDWIGIFR
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 VGWKTTREYYTFMWVTLPIDLNNKSAKQQEVQFKAYYLPKDDEYYQFCYVDEDGVVRGAS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 VGWKTTREYYTFMWVTLPIDLNNKSAKQQEVQFKAYYLPKDDEYYQFCYVDEDGVVRGAS
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB6 IPFQFRPENEEDILVVTTQGEVEEIEQHNKELCKENQELKDSCISLQKQNSDMQAELQKK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 IPFQFRPENEEDILVVTTQGEVEEIEQHNKELCKENQELKDSCISLQKQNSDMQAELQKK
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB6 QEELETLQSINKKLELKVKEQKDYWETELLQLKEQNQKMSSENEKMGIRVDQLQAQLSTQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 QEELETLQSINKKLELKVKEQKDYWETELLQLKEQNQKMSSENEKMGIRVDQLQAQLSTQ
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB6 EKEMEKLVQGDQDKTEQLEQLKKENDHLFLSLTEQRKDQKKLEQTVEQMKQNETTAMKKQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 EKEMEKLVQGDQDKTEQLEQLKKENDHLFLSLTEQRKDQKKLEQTVEQMKQNETTAMKKQ
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB6 QELMDENFDLSKRLSENEIICNALQRQKERLEGENDLLKRENSRLLSYMGLDFNSLPYQV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 QELMDENFDLSKRLSENEIICNALQRQKERLEGENDLLKRENSRLLSYMGLDFNSLPYQV
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB6 PTSDEGGARQNPGLAYGNPYSGIQESSSPSPLSIKKCPICKADDICDHTLEQQQMQPLCF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 PTSDEGGARQNPGLAYGNPYSGIQESSSPSPLSIKKCPICKADDICDHTLEQQQMQPLCF
              370       380       390       400       410       420

              430       440      
pF1KB6 NCPICDKIFPATEKQIFEDHVFCHSL
       ::::::::::::::::::::::::::
CCDS11 NCPICDKIFPATEKQIFEDHVFCHSL
              430       440      

>>CCDS58559.1 CALCOCO2 gene_id:10241|Hs108|chr17          (470 aa)
 initn: 2582 init1: 2582 opt: 2582  Z-score: 1249.3  bits: 240.4 E(32554): 2.9e-63
Smith-Waterman score: 2953; 94.9% identity (94.9% similar) in 470 aa overlap (1-446:1-470)

               10        20        30        40        50        60
pF1KB6 MEETIKDPPTSAVLLDHCHFSQVIFNSVEKFYIPGGDVTCHYTFTQHFIPRRKDWIGIFR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 MEETIKDPPTSAVLLDHCHFSQVIFNSVEKFYIPGGDVTCHYTFTQHFIPRRKDWIGIFR
               10        20        30        40        50        60

                                       70        80        90      
pF1KB6 ------------------------VGWKTTREYYTFMWVTLPIDLNNKSAKQQEVQFKAY
                               ::::::::::::::::::::::::::::::::::::
CCDS58 AFKCFQDKLEQELLKWRSQGQKLQVGWKTTREYYTFMWVTLPIDLNNKSAKQQEVQFKAY
               70        80        90       100       110       120

        100       110       120       130       140       150      
pF1KB6 YLPKDDEYYQFCYVDEDGVVRGASIPFQFRPENEEDILVVTTQGEVEEIEQHNKELCKEN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 YLPKDDEYYQFCYVDEDGVVRGASIPFQFRPENEEDILVVTTQGEVEEIEQHNKELCKEN
              130       140       150       160       170       180

        160       170       180       190       200       210      
pF1KB6 QELKDSCISLQKQNSDMQAELQKKQEELETLQSINKKLELKVKEQKDYWETELLQLKEQN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 QELKDSCISLQKQNSDMQAELQKKQEELETLQSINKKLELKVKEQKDYWETELLQLKEQN
              190       200       210       220       230       240

        220       230       240       250       260       270      
pF1KB6 QKMSSENEKMGIRVDQLQAQLSTQEKEMEKLVQGDQDKTEQLEQLKKENDHLFLSLTEQR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 QKMSSENEKMGIRVDQLQAQLSTQEKEMEKLVQGDQDKTEQLEQLKKENDHLFLSLTEQR
              250       260       270       280       290       300

        280       290       300       310       320       330      
pF1KB6 KDQKKLEQTVEQMKQNETTAMKKQQELMDENFDLSKRLSENEIICNALQRQKERLEGEND
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 KDQKKLEQTVEQMKQNETTAMKKQQELMDENFDLSKRLSENEIICNALQRQKERLEGEND
              310       320       330       340       350       360

        340       350       360       370       380       390      
pF1KB6 LLKRENSRLLSYMGLDFNSLPYQVPTSDEGGARQNPGLAYGNPYSGIQESSSPSPLSIKK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 LLKRENSRLLSYMGLDFNSLPYQVPTSDEGGARQNPGLAYGNPYSGIQESSSPSPLSIKK
              370       380       390       400       410       420

        400       410       420       430       440      
pF1KB6 CPICKADDICDHTLEQQQMQPLCFNCPICDKIFPATEKQIFEDHVFCHSL
       ::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 CPICKADDICDHTLEQQQMQPLCFNCPICDKIFPATEKQIFEDHVFCHSL
              430       440       450       460       470

>>CCDS58558.1 CALCOCO2 gene_id:10241|Hs108|chr17          (467 aa)
 initn: 2581 init1: 2581 opt: 2581  Z-score: 1248.9  bits: 240.3 E(32554): 3e-63
Smith-Waterman score: 2959; 95.5% identity (95.5% similar) in 467 aa overlap (1-446:1-467)

               10        20        30        40        50        60
pF1KB6 MEETIKDPPTSAVLLDHCHFSQVIFNSVEKFYIPGGDVTCHYTFTQHFIPRRKDWIGIFR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 MEETIKDPPTSAVLLDHCHFSQVIFNSVEKFYIPGGDVTCHYTFTQHFIPRRKDWIGIFR
               10        20        30        40        50        60

                                    70        80        90         
pF1KB6 ---------------------VGWKTTREYYTFMWVTLPIDLNNKSAKQQEVQFKAYYLP
                            :::::::::::::::::::::::::::::::::::::::
CCDS58 CSLNQTIQLLITPDTGSIWHQVGWKTTREYYTFMWVTLPIDLNNKSAKQQEVQFKAYYLP
               70        80        90       100       110       120

     100       110       120       130       140       150         
pF1KB6 KDDEYYQFCYVDEDGVVRGASIPFQFRPENEEDILVVTTQGEVEEIEQHNKELCKENQEL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 KDDEYYQFCYVDEDGVVRGASIPFQFRPENEEDILVVTTQGEVEEIEQHNKELCKENQEL
              130       140       150       160       170       180

     160       170       180       190       200       210         
pF1KB6 KDSCISLQKQNSDMQAELQKKQEELETLQSINKKLELKVKEQKDYWETELLQLKEQNQKM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 KDSCISLQKQNSDMQAELQKKQEELETLQSINKKLELKVKEQKDYWETELLQLKEQNQKM
              190       200       210       220       230       240

     220       230       240       250       260       270         
pF1KB6 SSENEKMGIRVDQLQAQLSTQEKEMEKLVQGDQDKTEQLEQLKKENDHLFLSLTEQRKDQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 SSENEKMGIRVDQLQAQLSTQEKEMEKLVQGDQDKTEQLEQLKKENDHLFLSLTEQRKDQ
              250       260       270       280       290       300

     280       290       300       310       320       330         
pF1KB6 KKLEQTVEQMKQNETTAMKKQQELMDENFDLSKRLSENEIICNALQRQKERLEGENDLLK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 KKLEQTVEQMKQNETTAMKKQQELMDENFDLSKRLSENEIICNALQRQKERLEGENDLLK
              310       320       330       340       350       360

     340       350       360       370       380       390         
pF1KB6 RENSRLLSYMGLDFNSLPYQVPTSDEGGARQNPGLAYGNPYSGIQESSSPSPLSIKKCPI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 RENSRLLSYMGLDFNSLPYQVPTSDEGGARQNPGLAYGNPYSGIQESSSPSPLSIKKCPI
              370       380       390       400       410       420

     400       410       420       430       440      
pF1KB6 CKADDICDHTLEQQQMQPLCFNCPICDKIFPATEKQIFEDHVFCHSL
       :::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 CKADDICDHTLEQQQMQPLCFNCPICDKIFPATEKQIFEDHVFCHSL
              430       440       450       460       

>>CCDS58561.1 CALCOCO2 gene_id:10241|Hs108|chr17          (374 aa)
 initn: 2494 init1: 2494 opt: 2494  Z-score: 1209.1  bits: 232.7 E(32554): 5e-61
Smith-Waterman score: 2494; 100.0% identity (100.0% similar) in 374 aa overlap (73-446:1-374)

             50        60        70        80        90       100  
pF1KB6 TFTQHFIPRRKDWIGIFRVGWKTTREYYTFMWVTLPIDLNNKSAKQQEVQFKAYYLPKDD
                                     ::::::::::::::::::::::::::::::
CCDS58                               MWVTLPIDLNNKSAKQQEVQFKAYYLPKDD
                                             10        20        30

            110       120       130       140       150       160  
pF1KB6 EYYQFCYVDEDGVVRGASIPFQFRPENEEDILVVTTQGEVEEIEQHNKELCKENQELKDS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 EYYQFCYVDEDGVVRGASIPFQFRPENEEDILVVTTQGEVEEIEQHNKELCKENQELKDS
               40        50        60        70        80        90

            170       180       190       200       210       220  
pF1KB6 CISLQKQNSDMQAELQKKQEELETLQSINKKLELKVKEQKDYWETELLQLKEQNQKMSSE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 CISLQKQNSDMQAELQKKQEELETLQSINKKLELKVKEQKDYWETELLQLKEQNQKMSSE
              100       110       120       130       140       150

            230       240       250       260       270       280  
pF1KB6 NEKMGIRVDQLQAQLSTQEKEMEKLVQGDQDKTEQLEQLKKENDHLFLSLTEQRKDQKKL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 NEKMGIRVDQLQAQLSTQEKEMEKLVQGDQDKTEQLEQLKKENDHLFLSLTEQRKDQKKL
              160       170       180       190       200       210

            290       300       310       320       330       340  
pF1KB6 EQTVEQMKQNETTAMKKQQELMDENFDLSKRLSENEIICNALQRQKERLEGENDLLKREN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 EQTVEQMKQNETTAMKKQQELMDENFDLSKRLSENEIICNALQRQKERLEGENDLLKREN
              220       230       240       250       260       270

            350       360       370       380       390       400  
pF1KB6 SRLLSYMGLDFNSLPYQVPTSDEGGARQNPGLAYGNPYSGIQESSSPSPLSIKKCPICKA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 SRLLSYMGLDFNSLPYQVPTSDEGGARQNPGLAYGNPYSGIQESSSPSPLSIKKCPICKA
              280       290       300       310       320       330

            410       420       430       440      
pF1KB6 DDICDHTLEQQQMQPLCFNCPICDKIFPATEKQIFEDHVFCHSL
       ::::::::::::::::::::::::::::::::::::::::::::
CCDS58 DDICDHTLEQQQMQPLCFNCPICDKIFPATEKQIFEDHVFCHSL
              340       350       360       370    

>>CCDS58560.1 CALCOCO2 gene_id:10241|Hs108|chr17          (404 aa)
 initn: 1767 init1: 1767 opt: 1769  Z-score: 866.0  bits: 169.3 E(32554): 6.5e-42
Smith-Waterman score: 2641; 90.6% identity (90.6% similar) in 446 aa overlap (1-446:1-404)

               10        20        30        40        50        60
pF1KB6 MEETIKDPPTSAVLLDHCHFSQVIFNSVEKFYIPGGDVTCHYTFTQHFIPRRKDWIGIFR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 MEETIKDPPTSAVLLDHCHFSQVIFNSVEKFYIPGGDVTCHYTFTQHFIPRRKDWIGIFR
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB6 VGWKTTREYYTFMWVTLPIDLNNKSAKQQEVQFKAYYLPKDDEYYQFCYVDEDGVVRGAS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 VGWKTTREYYTFMWVTLPIDLNNKSAKQQEVQFKAYYLPKDDEYYQFCYVDEDGVVRGAS
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB6 IPFQFRPENEEDILVVTTQGEVEEIEQHNKELCKENQELKDSCISLQKQNSDMQAELQKK
       :::::::::::::::::::                                         
CCDS58 IPFQFRPENEEDILVVTTQ-----------------------------------------
              130                                                  

              190       200       210       220       230       240
pF1KB6 QEELETLQSINKKLELKVKEQKDYWETELLQLKEQNQKMSSENEKMGIRVDQLQAQLSTQ
        :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 -EELETLQSINKKLELKVKEQKDYWETELLQLKEQNQKMSSENEKMGIRVDQLQAQLSTQ
      140       150       160       170       180       190        

              250       260       270       280       290       300
pF1KB6 EKEMEKLVQGDQDKTEQLEQLKKENDHLFLSLTEQRKDQKKLEQTVEQMKQNETTAMKKQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 EKEMEKLVQGDQDKTEQLEQLKKENDHLFLSLTEQRKDQKKLEQTVEQMKQNETTAMKKQ
      200       210       220       230       240       250        

              310       320       330       340       350       360
pF1KB6 QELMDENFDLSKRLSENEIICNALQRQKERLEGENDLLKRENSRLLSYMGLDFNSLPYQV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 QELMDENFDLSKRLSENEIICNALQRQKERLEGENDLLKRENSRLLSYMGLDFNSLPYQV
      260       270       280       290       300       310        

              370       380       390       400       410       420
pF1KB6 PTSDEGGARQNPGLAYGNPYSGIQESSSPSPLSIKKCPICKADDICDHTLEQQQMQPLCF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS58 PTSDEGGARQNPGLAYGNPYSGIQESSSPSPLSIKKCPICKADDICDHTLEQQQMQPLCF
      320       330       340       350       360       370        

              430       440      
pF1KB6 NCPICDKIFPATEKQIFEDHVFCHSL
       ::::::::::::::::::::::::::
CCDS58 NCPICDKIFPATEKQIFEDHVFCHSL
      380       390       400    




446 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sat Nov  5 11:16:04 2016 done: Sat Nov  5 11:16:04 2016
 Total Scan time:  2.950 Total Display time:  0.030

Function used was FASTA [36.3.4 Apr, 2011]
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