GENSCAN 1.0	Date run:  5-Nov-116	Time: 11:14:36

Sequence gi568815597r:202496760_202705772 : 209013 bp : 45.30% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.05 PlyA -   3539   3534    6                               1.05
 1.04 Term -   3821   3757   65  0  2  117   54     8 0.168  -1.65
 1.03 Intr -   4691   4591  101  1  2   43   98    79 0.162   4.15
 1.02 Intr -  19157  19090   68  2  2   72   64    62 0.010  -0.10
 1.01 Init -  31630  31571   60  1  0   74   66    37 0.304   1.35
 1.00 Prom -  45877  45838   40                              -0.06

 2.00 Prom +  47573  47612   40                              -4.36
 2.01 Init +  64675  64692   18  0  0   83  103    29 0.974   4.00
 2.02 Intr +  67684  67788  105  0  0  106  110    91 0.900  13.51
 2.03 Intr +  72388  72438   51  0  0   65   86    88 0.892   5.40
 2.04 Term +  83715  83801   87  2  0  140   44   136 0.970  12.06
 2.05 PlyA +  86141  86146    6                               1.05

 3.13 PlyA -  86783  86778    6                               1.05
 3.12 Term -  95145  94981  165  0  0   40   36    91 0.058  -2.98
 3.11 Intr -  96728  96579  150  2  0  106   74    53 0.541   6.06
 3.10 Intr - 100204 100028  177  1  0  145   30   401 0.697  40.12
 3.09 Intr - 101760 101629  132  0  0  129  -48    96 0.617   0.94
 3.08 Intr - 102592 102459  134  2  2   83   53   340 0.989  30.36
 3.07 Intr - 103715 103598  118  2  1   83   98   203 0.999  20.84
 3.06 Intr - 105298 105131  168  1  0  124   94   247 0.996  29.04
 3.05 Intr - 105786 105619  168  0  0  136   48   210 0.770  21.94
 3.04 Intr - 106368 106240  129  0  0  137   85   151 0.998  20.59
 3.03 Intr - 107862 107696  167  1  2   67   91   271 0.994  24.98
 3.02 Intr - 109030 108836  195  2  0  116   76   208 0.841  21.79
 3.01 Init - 112479 112347  133  0  1   78   47    67 0.605   1.90
 3.00 Prom - 113258 113219   40                              -4.46

 4.00 Prom + 116181 116220   40                              -3.76
 4.01 Init + 131749 132055  307  0  1   78   53   120 0.033   4.96
 4.02 Intr + 142990 143094  105  2  0  102   16    81 0.022   2.49
 4.03 Term + 150147 150175   29  1  2   93   48    73 0.251   2.04
 4.04 PlyA + 150411 150416    6                               1.05

 5.00 Prom + 153592 153631   40                              -4.56
 5.01 Init + 159849 159942   94  2  1   85   97    53 0.774   6.44
 5.02 Intr + 160264 160396  133  2  1   97   71    51 0.971   4.00
 5.03 Intr + 160926 161013   88  0  1   86   94    45 0.673   4.87
 5.04 Intr + 161764 161788   25  0  1   78   78    25 0.294  -1.90
 5.05 Intr + 163630 163672   43  2  1   55   94    91 0.806   3.70
 5.06 Intr + 165601 165782  182  1  2   57   88   132 0.798   9.61
 5.07 Intr + 166615 166829  215  2  2  133  113    25 0.940   7.93
 5.08 Intr + 173165 173298  134  1  2   42   52    78 0.412  -0.96
 5.09 Term + 175517 175706  190  2  1   65   54   113 0.308   2.52
 5.10 PlyA + 175709 175714    6                               1.05

 6.00 Prom + 179960 179999   40                              -4.16
 6.01 Init + 185135 185249  115  1  1   61   93   149 0.848  13.07
 6.02 Term + 205517 205638  122  0  2  115   39    65 0.023   2.94
 6.03 PlyA + 206075 206080    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term +  78243  78377  135  2  0   89   32   171 0.943   9.62


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597r:202496760_202705772|GENSCAN_predicted_peptide_1|97_aa
MTELTGIQQPQIVLFEHKGHKLVQGSSSDPGKVNRIYQHYEARIGLENSSRANRENSKKA
IDKTQCKENGIQAKDADSSNHSPTLYFYELNFLRSYI

>gi568815597r:202496760_202705772|GENSCAN_predicted_CDS_1|294_bp
atgactgaattgactggcatacaacaaccacaaattgttctctttgagcacaaagggcat
aaattggttcagggaagttcatctgatccaggaaaggtcaatcggatataccaacactac
gaggccaggattggcttggaaaacagctccagagcaaacagggaaaacagtaagaaagca
atagataaaactcaatgtaaagaaaatggaatccaggccaaagatgcagactccagtaac
cacagtcctactctctacttctatgagctcaactttttaagatcctacatatga

>gi568815597r:202496760_202705772|GENSCAN_predicted_peptide_2|86_aa
MSTVIVLYESALTENQKLKTKLQEAQLELADIKSKLEKVAQERRALERKMSEMEEEMKVL
TELKSDNQRLKDENGALIRVISKLSK

>gi568815597r:202496760_202705772|GENSCAN_predicted_CDS_2|261_bp
atgtccacggtcatagtgctctatgagagtgctctgactgaaaaccaaaaactgaaaaca
aaacttcaggaagcccagctagagctagcagatataaagtccaagcttgagaaggtggcc
caggagaggcgagccttggagcgcaaaatgtcagaaatggaggaagaaatgaaggtgtta
acagaactgaaatccgacaaccagaggctgaaagatgaaaatggtgccctcatcagagtc
atcagcaaactgtccaagtag

>gi568815597r:202496760_202705772|GENSCAN_predicted_peptide_3|611_aa
MEYYAAIKNDEFMSFVGTWMKLETIILSKLSQGQKTKHRMFSLIAVSSATMRNIFKRNQE
PIVAPATTTATMPIGPVDNSTESGGAGESQEDMFAKLKEKLFNEINKIPLPPWALIAIAV
VAGLLLLTCCFCICKKCCCKKKKNKKEKGKGMKNAMNMKDMKGGQLPQDDDDAETGLTEG
EGEGEEEKEPENLGKLQFSLDYDFQANQLTVGVLQAAELPALDMGGTSDPYVKVFLLPDK
KKKYETKVHRKTLNPAFNETFTFKVPYQELGGKTLVMAIYDFDRFSKHDIIGEVKVPMNT
VDLGQPIEEWRDLQGGEKEEPEKLGDICTSLRYVPTAGKLTVCILEAKNLKKMDVGGLSD
PYVKIHLMQNGKRLKKKKTTVKKKTLNPYFNESFSFEIPFEQIQEGWGQGYKRIFRVGSV
IYGDVYDVIDGILQGNTGQLSDNVNPREKVQVVVTVLDYDKLGKNEAIGKIFVGSNATGT
ELRHWSDMLANPRRPIAQWHSLKPEEEESIHNLCLQNQCGMILLAQGFSEREKRGHYSPP
VGKSSSLINLPPCSGVGFSSISTLGEEQTAVGLHGSGYLSWGPCGGNQDFQEQPVSSSAR
DDRTIPAYSPL

>gi568815597r:202496760_202705772|GENSCAN_predicted_CDS_3|1836_bp
atggaatactatgcagccataaaaaatgatgagttcatgtcctttgtagggacatggatg
aagctggaaaccatcattctcagcaaactatcgcaaggacaaaaaaccaaacaccgcatg
ttctcactcatagctgtttcctctgccaccatgaggaacattttcaagaggaaccaggag
cctattgtggctcctgccaccaccaccgccacgatgcccattggacccgtggacaactcc
actgagagtgggggtgctggggagagccaggaggacatgtttgccaaactgaaggagaag
ttattcaatgagataaacaagattcccttaccaccctgggcactgatcgccattgctgtg
gttgctgggctcctgcttctcacctgctgcttctgcatctgcaagaaatgctgctgcaag
aagaagaagaacaagaaggagaagggcaaaggcatgaagaatgccatgaacatgaaggac
atgaaagggggtcagctcccacaggatgacgacgacgcagagacaggcctgactgagggg
gaaggtgaaggggaggaggagaaagagccagagaacctgggcaaactgcagttttccctg
gactatgattttcaggctaatcagcttactgtgggcgttctgcaggctgctgaactgcct
gccctggacatgggaggcacctcagacccttatgtcaaggtcttcctccttcctgacaag
aagaagaaatatgagaccaaagtccatcggaagacactgaaccctgccttcaatgaaacc
ttcaccttcaaggtgccataccaggagcttgggggcaaaactctggtgatggccatctat
gactttgaccgcttctccaaacatgacatcattggagaggtaaaggtgcctatgaacaca
gtggacctcggccagcccattgaggagtggagagacctgcaaggcggggaaaaggaggag
ccggagaagctgggcgacatctgcacctccctgcgctatgtgcccacggccgggaagctc
actgtctgcatcctggaggctaagaacctcaagaagatggacgtgggcggcctttcagac
ccgtacgtgaagatccacctgatgcagaatggcaagaggctcaagaagaagaagacaacc
gtgaagaagaagaccctgaacccatacttcaacgagtccttcagctttgagatccccttc
gagcagattcaggagggctgggggcaagggtacaagagaatcttcagagttggttctgtc
atctatggagatgtgtatgatgttattgatggaatacttcaagggaacactgggcagctc
agtgataatgttaatccaagagaaaaagtccaggtagtggtcaccgtgctggactatgac
aagctgggcaagaacgaagccataggcaagatcttcgtgggcagcaatgccacgggcaca
gagctgcggcactggtccgacatgctggccaacccccggaggcccatcgcccagtggcac
tcgctcaagcctgaggaggaggaaagcatacataacttgtgtctgcagaatcagtgtggg
atgattttgctggcccaaggcttcagcgagagggagaagagaggtcactacagccctcct
gtgggtaaaagcagctctcttataaacctgcctccatgcagtggggtggggttcagctcc
atctctacgctgggcgaggagcagacagcagtgggactccatggttctggatacctttcc
tggggtccctgtggaggcaaccaggattttcaggagcagccagtcagcagctcagccagg
gatgacagaaccatccctgcttactcacctctgtag

>gi568815597r:202496760_202705772|GENSCAN_predicted_peptide_4|146_aa
MPIITNTYDSSWSPETKVEHASPGGTIRCSKEASSLLPDRGPGQTWEIGARRDEPWPQNT
HGLEEGSSEGENSKLESLNLEFYVDPNLEDSSAEEEEPSETPGPMTKTRACKLLEPEASA
QQEEDTGRWGILGDRVHGFLDKVDSS

>gi568815597r:202496760_202705772|GENSCAN_predicted_CDS_4|441_bp
atgcccattatcaccaacacctatgacagctcatggtctccagaaactaaagtggagcat
gcaagtcccgggggcacaattaggtgctccaaagaagccagctctctcctgcctgaccgg
gggccgggacagacatgggagataggggccaggagggatgaaccatggcctcaaaacacc
catgggctggaggaggggagcagtgagggggagaattccaaattggaaagcctcaacttg
gaattctatgtggatccaaacctagaagacagctccgctgaggaagaggagccaagtgaa
acaccaggccccatgacgaagactagagcatgcaaactcctggagcctgaggccagtgcg
cagcaagaggaggacacaggacgttggggcattttgggggatcgtgtgcatggcttcctg
gacaaggtggacagcagctga

>gi568815597r:202496760_202705772|GENSCAN_predicted_peptide_5|367_aa
MVRSLDELDHMLTLTYHTYVEGRTSCHSHDIVFSIASALLAKFFRAQLIFVYVLFKMGCP
EKHSTPYIRANCPNSSFWVQKLSAVSIDNSPGIPSLSLTSTGSQQAMTAAARGANGGYNF
CYRYYPSRAPYIQGKKVNPLISNDAQGSIWKTAHQLLKLTEAKGSSIVYLDYDSADTGRA
KCYPSTGSGCWASPSAPSTQYFPKKTPKTFAFKPAPLPESPVSVHSTVVFLFTPLRNLSG
NILNRSFIMTISSNLHIGTKLILIGVKAEGVMNTKLAGPDPLNNSATHTPTFISTPVLTD
ICQHSVMVFGSGTFGRELGLDEAMKWGSSAMGRGCSQKADICEPGRGPSPRTTSASTLIL
DFQSPEL

>gi568815597r:202496760_202705772|GENSCAN_predicted_CDS_5|1104_bp
atggtgcgaagcttagatgagctggaccacatgttaactttgacataccacacatatgtg
gagggccgaacctcgtgccacagccatgacatagtgttttccattgcctctgccctgctg
gccaaattcttccgggcacagctcatttttgtgtatgtcctttttaaaatgggatgtcca
gagaagcacagcacaccctacataagagccaactgtccaaattccagtttctgggtccag
aaactgagtgcagtcagcatagacaacagccctgggatcccctcactgtccttgacaagc
actggaagccagcaggctatgacagcagctgccagaggggctaatggtggctacaacttc
tgttaccgctactaccccagcagagccccatacattcaaggcaagaaagttaaccctcta
attagtaatgatgctcagggcagcatctggaagacagcacatcaattactaaaactcact
gaggccaagggctcctccatagtctacctggactatgacagcgcagatactggcagggcc
aagtgctacccttccaccggctcaggttgctgggcgtcaccatctgcaccaagtacacaa
tacttccccaagaaaactccaaaaacctttgccttcaaaccggctcctcttcctgaatcc
cctgtgtctgtccacagcaccgttgtgtttctgttcactccacttcgaaacctcagcggc
aacattttaaatagatcttttattatgactatatcctcaaacttacacataggtacaaag
cttatcctcattggtgtaaaagcagagggcgtgatgaatacaaagcttgcaggtccagat
ccattgaacaacagtgccacccacaccccaacattcatcagcacacctgtactcactgac
atatgccagcactctgtgatggtatttggaagtgggacctttgggagagaattaggttta
gatgaggccatgaaatgggggtcctctgccatgggaagaggatgtagccagaaggctgac
atctgcgagccaggaagagggccctcacccagaaccacatctgccagcaccttgatctta
gacttccagtctccggaactgtga

>gi568815597r:202496760_202705772|GENSCAN_predicted_peptide_6|78_aa
MSLRGDQIQDRDLISYPFKKPTMELLTAPPDEARATVAAAAAATSTVPSIKELIQFLSCA
SPFASCNARIDLETGQPY

>gi568815597r:202496760_202705772|GENSCAN_predicted_CDS_6|237_bp
atgagcctccgtggggatcagatccaagaccgtgacctcatcagctaccccttcaaaaag
ccaaccatggagctgctgacagctccacctgatgaggccagggccacggtggctgctgca
gcagcagcaaccagcacagttcccagcatcaaagagctaatccaatttctcagctgtgct
tcccccttcgcctcctgcaatgccaggattgatttggaaacagggcagccttattaa