GENSCAN 1.0	Date run:  5-Nov-116	Time: 10:59:54

Sequence gi568815593f:126677509_126936261 : 258753 bp : 43.21% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init + 100001 100359  359  1  2  116   89   862 0.440  83.68
 1.02 Intr + 127268 127424  157  2  1   61  110   155 0.995  15.01
 1.03 Intr + 128063 128188  126  1  0   71   78    87 0.988   6.88
 1.04 Intr + 132672 132842  171  2  0   98   61   147 0.926  13.14
 1.05 Intr + 134265 134390  126  2  0  100   84    86 0.958  10.28
 1.06 Intr + 141414 141634  221  2  2   24   94   248 0.874  16.10
 1.07 Intr + 143402 143627  226  2  1   91   90   210 0.999  19.49
 1.08 Intr + 145273 145377  105  0  0   99   98     4 0.880   2.91
 1.09 Intr + 148480 148599  120  0  0   97   64   126 0.952  11.79
 1.10 Intr + 155186 155293  108  1  0   63   67   129 0.951   8.78
 1.11 Term + 159057 159065    9  2  0   78   55     0 0.095  -6.11
 1.12 PlyA + 159079 159084    6                               1.05

 2.00 Prom + 159151 159190   40                              -2.26
 2.01 Init + 177200 177620  421  1  1   65   47   262 0.307  14.35
 2.02 Intr + 179495 179579   85  0  1   61   12    78 0.122  -3.62
 2.03 Intr + 181138 181201   64  1  1   86   87    53 0.286   3.72
 2.04 Intr + 183365 183434   70  1  1   46  100    49 0.378   0.65
 2.05 Term + 186704 186858  155  0  2   30   39   140 0.413   1.38
 2.06 PlyA + 186932 186937    6                               1.05

 3.08 PlyA - 186948 186943    6                               1.05
 3.07 Term - 193283 193125  159  2  0  122   41   121 0.997   8.74
 3.06 Intr - 200886 200677  210  0  0  102   94   112 0.525  12.31
 3.05 Intr - 202491 202363  129  0  0  110   54    36 0.504   3.29
 3.04 Intr - 211745 211625  121  1  1   43   63    37 0.103  -2.80
 3.03 Intr - 214531 213733  799  2  1   15   91   338 0.265  17.32
 3.02 Intr - 215607 215110  498  1  0   46   81   293 0.353  17.36
 3.01 Init - 217820 217622  199  2  1   58   -8   261 0.410  12.56
 3.00 Prom - 218905 218866   40                              -1.16

 4.03 PlyA - 221005 221000    6                               1.05
 4.02 Term - 226617 226581   37  2  1   93   37    40 0.520  -3.79
 4.01 Init - 227908 226965  944  1  2   86   53   272 0.742  16.63
 4.00 Prom - 228151 228112   40                              -8.96

 5.02 PlyA - 228299 228294    6                               1.05
 5.01 Sngl - 229925 228831 1095  2  0   44   35   372 0.991  24.50
 5.00 Prom - 230018 229979   40                              -4.96

 6.04 PlyA - 230189 230184    6                               1.05
 6.03 Term - 231525 230417 1109  1  2   29   43   568 0.931  38.63
 6.02 Intr - 237626 237418  209  1  2  105   89   116 0.970  12.12
 6.01 Init - 240663 240476  188  0  2   74   52   257 0.994  19.46

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815593f:126677509_126936261|GENSCAN_predicted_peptide_1|575_aa
MATATPVPPRMGSRAGGPTTPLSPTRLSRLQEKEELRELNDRLAVYIDKVRSLETENSAL
QLQVTEREEVRGRELTGLKALYETELADARRALDDTARERAKLQIELGKCKAEHDQLLLN
YAKKESDLNGAQIKLREYEAALNSKDAALATALGDKKSLEGDLEDLKDQIAQLEASLAAA
KKQLADETLLKVDLENRCQSLTEDLEFRKSMYEEEINETRRKHETRLVEVDSGRQIEYEY
KLAQALHEMREQHDAQVRLYKEELEQTYHAKLENARLSSEMNTSTVNSAREELMESRMRI
ESLSSQLSNLQKESRACLERIQELEDLLAKEKDNSRRMLTDKEREMAEIRDQMQQQLNDY
EQLLDVKLALDMEISAYRKLLEGEEERLKLSPSPSSRVTVSRASSSRSVRTTRGKRKRVD
VEESEASSSVSISHSASATGNVCIEEIDVDGKFIRLKNTSEQDQPMGGWEMIRKIGDTSV
SYKYTSRYVLKAGQTVTIWAANAGVTASPPTDLIWKNQNSWGTGEDVKVILKNSQGEEVA
QRSTVFKTTIPEEEEEEEEAAGVVVEEELFHQQFL

>gi568815593f:126677509_126936261|GENSCAN_predicted_CDS_1|1728_bp
atggcgactgcgacccccgtgccgccgcggatgggcagccgcgctggcggccccaccacg
ccgctgagccccacgcgcctgtcgcggctccaggagaaggaggagctgcgcgagctcaat
gaccggctggcggtgtacatcgacaaggtgcgcagcctggagacggagaacagcgcgctg
cagctgcaggtgacggagcgcgaggaggtgcgcggccgtgagctcaccggcctcaaggcg
ctctacgagaccgagctggccgacgcgcgacgcgcgctcgacgacacggcccgcgagcgc
gccaagctgcagatcgagctgggcaagtgcaaggcggaacacgaccagctgctcctcaac
tatgctaagaaggaatctgatcttaatggcgcccagatcaagcttcgagaatatgaagca
gcactgaattcgaaagatgcagctcttgctactgcacttggtgacaaaaaaagtttagag
ggagatttggaggatctgaaggatcagattgcccagttggaagcctccttagctgcagcc
aaaaaacagttagcagatgaaactttacttaaagtagatttggagaatcgttgtcagagc
cttactgaggacttggagtttcgcaaaagcatgtatgaagaggagattaacgagaccaga
aggaagcatgaaacgcgcttggtagaggtggattctgggcgtcaaattgagtatgagtac
aagctggcgcaagcccttcatgagatgagagagcaacatgatgcccaagtgaggctgtat
aaggaggagctggagcagacttaccatgccaaacttgagaatgccagactgtcatcagag
atgaatacttctactgtcaacagtgccagggaagaactgatggaaagccgcatgagaatt
gagagcctttcatcccagctttctaatctacagaaagagtctagagcatgtttggaaagg
attcaagaattagaggacttgcttgctaaagaaaaagacaactctcgtcgcatgctgaca
gacaaagagagagagatggcggaaataagggatcaaatgcagcaacagctgaatgactat
gaacagcttcttgatgtaaagttagccctggacatggaaatcagtgcttacaggaaactc
ttagaaggcgaagaagagaggttgaagctgtctccaagcccttcttcccgtgtgacagta
tcccgagcatcctcaagtcgtagtgtacgtacaactagaggaaagcggaagagggttgat
gtggaagaatcagaggcgagtagtagtgttagcatctctcattccgcctcagccactgga
aatgtttgcatcgaagaaattgatgttgatgggaaatttatccgcttgaagaacacttct
gaacaggatcaaccaatgggaggctgggagatgatcagaaaaattggagacacatcagtc
agttataaatatacctcaagatatgtgctgaaggcaggccagactgttacaatttgggct
gcaaacgctggtgtcacagccagccccccaactgacctcatctggaagaaccagaactcg
tggggcactggcgaagatgtgaaggttatattgaaaaattctcagggagaggaggttgct
caaagaagtacagtctttaaaacaaccatacctgaagaagaggaggaggaggaagaagca
gctggagtggttgttgaggaagaacttttccaccagcagttcttatga

>gi568815593f:126677509_126936261|GENSCAN_predicted_peptide_2|264_aa
MARAGRLCWGTWRPPLQLLAQVLSPSLPPGWGRRPAARSAGACRAHAHPELTLACKCAPN
PGSHRRLSLHTSPQAEGASSSLGQPRVELPQCSGRLKGSSSAARVGAEVEEAPRASEGCQ
HAVTSHYEQLAGQSWSGPKEELPQCKDSVELQRLTRPELPTTLAYCPECLLLFKGELTAI
QGDGTSARMETKSKREDGNKTSNEEEDNCRLNEGALGRCHCHFTESYKQLPRGEAGHMEQ
HCAIGLCKTPGRGTAQLWPDQPVE

>gi568815593f:126677509_126936261|GENSCAN_predicted_CDS_2|795_bp
atggcacgggcaggccggctgtgctgggggacctggcgcccccctctgcagctgctggcc
caggtgctaagcccctcactgcccccgggctgggggcgcaggccggctgctcggagtgcg
ggggcctgccgagcccacgcccacccggaactcacgctggcctgcaagtgtgcgcccaac
cctggttcccaccggcgcctctccctccacacctccccacaagcagagggagccagctcc
agcctcggccagcccagagtggagctcccacagtgcagcggcaggctgaagggctcctca
agcgcggccagagtgggcgcggaggtcgaggaggcgccaagagcgagcgagggctgccag
cacgctgtcacctctcactatgaacaattggcaggacagtcatggtctggacctaaggaa
gagctcccacaatgcaaagattctgtggagctgcaaaggttgacccggccagagctgccc
acgaccctggcgtactgtccagaatgccttctcctcttcaaaggcgagctgactgcaatt
cagggagatggaacttccgccaggatggagacaaaaagtaaaagagaggatggaaataaa
acatcaaatgaagaagaggataactgcaggctgaatgaaggagccttgggccgctgccac
tgccatttcacggagtcctacaaacagctgccacgtggagaggcgggccacatggagcag
cactgtgccatcggactgtgtaagacacctggcagaggtactgcccagctgtggccagat
caacccgtggaataa

>gi568815593f:126677509_126936261|GENSCAN_predicted_peptide_3|704_aa
MENDFEELREEGFRRSNYSELQEDIQTKGKEVENFEKTLEECITGITNTEKCLKELMELK
TKARELQIQTTIREYYKHLYANKLENLEEMDKFLDTYTLPRLNQEEVESLNRPITGSEIV
AIINSLPTKKSPGPDGFTAEFYQRYKEELVPFLLKLFQSIDKEGILPNSFYEASIILIRK
PGRDITKKENFRPISLMNIDAKILNKILAKRIQQHIKKLIHHDQVGFIPGMQENKIPRNP
TTRDVKDLFKENYKPLLKEIKEDTNKWKNIPCSWVGRINIVKMAILPKVIYRFNAIPIKL
PMPFFTELEKTTLKFIWNQKRARVAKSILSQKNKAGGITLPDFKLYYKATVTKTAWYWYQ
NRDIDQWNRTEPSEITPHIYNYLIFDKPEKNKQWGKDSLFNKWCWENWLAICRKLKLDPF
LTPYTKINSRWIKDLNVRPKTIKTLEENLGITIQDIGMGKDFMSKTPKAMATKAKIDKWD
LIKLKSFCTAKETTIRVNSVSHDHVLLLEVIIQMFRNPDSNSSPTEWSLDTSNLPVWGPW
FCRIRCPGHLGCKWPVLLFGKPAVWHCWARISRQSMLGPCLLWLRNPGPQHEKRTLFGDM
VCFLFITPLATISGWLCLRGAVDHLHFSSRLEAVGLIALTVALFTIYLFWTLVSFRYHCR
LYNEWRRTNQRVILLIPKSVNVPSNQPSLLGLHSVKRNSKETVV

>gi568815593f:126677509_126936261|GENSCAN_predicted_CDS_3|2115_bp
atggagaatgactttgaggagctgagagaagaaggcttcagacgatcaaattactctgag
ctacaggaggacattcaaaccaaaggcaaagaagttgaaaactttgaaaaaactttagaa
gaatgtataacaggaataaccaatacagagaagtgcttaaaggagctgatggagctgaaa
accaaggctcgagaactacaaatacaaactaccatcagagaatactacaaacacctctac
gcaaataaactagaaaatctagaagaaatggataaattcctcgacacatacaccctccca
agactcaaccaggaagaagttgaatctctgaatagaccaataacaggatctgaaattgtg
gcaataatcaatagcttaccaacgaaaaagagtccaggaccagatggattcacagctgaa
ttctaccagaggtacaaggaggaactggtaccattccttctgaaactattccaatcaata
gacaaagagggaatcctccctaactcattttatgaggccagcatcattctgatacgaaag
ccaggcagagacataacaaaaaaagagaattttagaccaatatccttgatgaacattgat
gcaaaaattctcaataaaatactggcaaaacgaatccagcagcacatcaaaaagcttatc
caccatgatcaagtgggcttcatccctgggatgcaagagaataaaatacctaggaatcca
actacaagggatgtgaaggacctcttcaaggagaactacaaaccactgctcaaggaaata
aaagaggatacaaacaaatggaagaacattccatgctcatgggtaggaagaatcaatatc
gtgaaaatggccatactgcccaaggtaatttacagattcaatgccatccccatcaagcta
ccaatgcctttcttcacagaattggaaaaaactactttaaagttcatatggaaccaaaaa
agagcccgcgtcgccaagtcaatcctaagccaaaagaacaaagctggaggcatcacacta
cctgacttcaaactatactacaaggctacagtaaccaaaacagcatggtactggtaccaa
aacagagatatagatcagtggaacagaacagagccctcagaaataacgccgcatatctac
aactatctgatctttgacaaacctgagaaaaacaagcaatggggaaaggattccctattt
aataaatggtgctgggaaaactggctagccatatgtagaaagctgaaactggatcccttc
cttacaccttatacaaaaatcaattcaagatggattaaagacttaaacgttagacctaaa
accataaaaacgctagaagaaaacctaggcattaccattcaggacataggcatgggcaag
gacttcatgtctaaaacaccaaaagcaatggcaacaaaagccaaaattgacaaatgggat
ctaattaaactaaagagcttctgcacagcaaaagaaactaccatcagagtgaacagtgta
tcccatgatcatgtacttctgctggaagtaattattcaaatgttcagaaacccagactcc
aacagcagtccaacggagtggtcattagacaccagtaaccttccagtctgggggccatgg
ttttgtaggattcgctgccctggccacttgggctgcaagtggccagtgctcctgtttggc
aagccagctgtgtggcactgctgggcacgcatcagcagacagtcaatgctaggtccctgt
ttgttgtggctgagaaaccctggcccccagcatgagaagcggactctgtttggcgacatg
gtgtgcttcttgtttataactcccctggccaccatctcgggctggctgtgcctgcggggc
gccgtggaccacctgcactttagtagtcggctggaagccgtcggactgattgcactcact
gtcgcactcttcactatttacctcttttggacactagtgtcatttaggtaccactgtcga
ttgtacaacgagtggcgtcggaccaatcagagggtgattctcctcattccaaagtctgtc
aatgtaccttctaaccagccgtccttgctgggcctccattcggtcaagaggaactcaaag
gagacagttgtttga

>gi568815593f:126677509_126936261|GENSCAN_predicted_peptide_4|326_aa
MAILPKVIYRFNAIPIKLPMPFFTELEKTTLKFIWNQKRAHITKSILSQKNKAGGITLPD
FKLYYKATVTKTAWYWYQNRDIDQWNRTEPSEITPHIYNYLIFDKPEKNKQWGKDSLFNK
WCWENWLAICRKLKLDPFLTPYTKINSRWIKDLNVRPKTIKTLEENLGITIQDIGMGKDF
MSKTPKAMATKAKIDKWDLIELKSFCTAKETTIRVNRQPTEWEKIFPTYSSDKGLISRIY
NELKQIYKKKTNNPIKKWAKDMNRHFSKEDIHAAKKHMKKCSPSLAIRETQIKATMRYHL
TPVRMAIIKKSGNNRDVDEIGNHHSQ

>gi568815593f:126677509_126936261|GENSCAN_predicted_CDS_4|981_bp
atggccatactgcccaaggtaatttacagattcaatgccatccccatcaagctaccaatg
cctttcttcacagaattggaaaaaactactttaaagttcatatggaaccaaaaaagagcc
cacatcaccaagtcaatcctaagccaaaagaacaaagctggaggcatcacactacctgac
ttcaaactatactacaaggctacagtaaccaaaacagcatggtactggtaccaaaacaga
gatatagatcaatggaacagaacagagccctcagaaataacgccgcatatctacaactat
ctgatctttgacaaacctgagaaaaacaagcaatggggaaaggattccctatttaataaa
tggtgctgggaaaactggctagccatatgtagaaagctgaaactggatcccttccttaca
ccttatacaaaaatcaattcaagatggattaaagacttaaacgttagacctaaaaccata
aaaaccctagaagaaaacctaggcattaccattcaggacataggcatgggcaaggacttc
atgtctaaaacaccaaaagcaatggcaacaaaagccaaaattgacaaatgggatctaatt
gaactaaagagcttctgcacagcaaaagaaactaccatcagagtgaacaggcaacctaca
gaatgggagaaaattttcccaacctactcatctgacaaagggctaatatccagaatctac
aatgaactcaaacaaatttacaagaaaaaaacaaacaaccccatcaaaaagtgggcgaag
gacatgaacagacacttctcaaaagaagacattcatgcagccaaaaaacacatgaaaaaa
tgctcaccatcactggccatcagagaaacacaaatcaaagccacaatgagataccatctc
acaccagttagaatggcaatcattaaaaagtcaggaaacaacagggacgtggatgaaatt
ggaaatcatcattctcagtaa

>gi568815593f:126677509_126936261|GENSCAN_predicted_peptide_5|364_aa
MGDFNTPLSTLDRSTRQKVNKDTQELNSALHQADLIDIYRTLHPKSTEYTFFSAPHHTYS
KIDHILGSKALLSKCKRTEIITNCLSDHSAIKLELRVKNLTQNRSTTWKLNNLLLNDYWV
RNEMKAEIKMFFETNDNKDTTYQHLWDAFKAVCRGKFIALNAHKRKQERSKIDTLTSQLK
ELEMQEQTHSKASRRQEITKIRAELKEIETQKTFQKINESRSWFFERINKIDRPLARLIK
KKREKNQIDTIKNDKGDITTDPTEIQTTMREYYKHLYANKLENLEEIDKFLDTYTLPRLN
QEEVESLHRQMTGAEIVAIINSLPTKKSPGPDGFTAEFYQRYKEELGTIPSETIPINRQR
GNPP

>gi568815593f:126677509_126936261|GENSCAN_predicted_CDS_5|1095_bp
atgggagactttaacaccccactgtcaacattagacagatcaacgagacagaaagtcaac
aaggatacccaggaattgaactcagctctgcaccaagcagacctaatagacatctacaga
actctccaccccaaatcaacagaatatacatttttttcagcaccacaccacacctattcc
aaaattgaccacatacttggaagtaaagctctcctcagcaaatgtaaaagaacagaaatt
ataacaaactgtctctcagaccacagtgcaatcaaactagaactcagggttaagaatctc
actcaaaaccgctcaactacatggaaactgaacaacctgctcctgaatgactactgggta
cgtaacgaaatgaaggcagaaataaagatgttctttgaaaccaacgacaacaaagacaca
acataccagcatctctgggacgcattcaaagcagtgtgtagagggaaatttatagcacta
aatgcccacaagagaaagcaggaaagatccaaaattgacaccctaacatcacaattaaaa
gaactagaaatgcaagagcaaacacattcaaaagctagcagaaggcaagaaataactaaa
atcagagcagaactgaaggaaatagagacacaaaaaacctttcaaaaaattaacgaatcc
aggagctggttttttgaaaggatcaacaagattgatagaccactagcaagactaataaag
aaaaaaagagagaagaatcaaatagacacaataaaaaatgataaaggggatatcaccact
gatcccacagaaatacaaactaccatgagagaatactacaaacacctctacgcaaataaa
ctagaaaatctagaagaaattgataaattcctggacacatacactctcccaagactgaac
caggaagaagttgaatctctgcatagacaaatgacaggagctgaaattgtggcaataatc
aatagcttaccaacgaaaaagagtccaggaccagatggattcacagccgaattctaccag
aggtacaaggaggaactgggtaccattccttctgaaactattccaatcaatagacaaaga
gggaatcctccctaa

>gi568815593f:126677509_126936261|GENSCAN_predicted_peptide_6|501_aa
MTTSRCSHLPEVLPDCTSSAAPVVKTVEDCGSLVNGQPQYVMQVSAKDGQLLSTVVRTLA
TQSPFNDRPMCRICHEGSSQEDLLSPCECTGTLGTIHRSCLEHWLSSSNTSYCELCHFRF
AVERKPRPLVEVKGKLTNRKDIHTKNPSVHHHHQRPKVDKTTNLGKKHSRKTGNSKKQST
SPPPKERRSSPATEQSWMENDFEELREEGFRRWNYSELQEDIQTKGKEVENFEKTLEECI
TGITNTEKCLKELMELKTKAREQHEECRSLRSRCDQLEERIPLMEDEMNEMKQEGKFREK
RIKRNEQSLQEIWDYVKRPNLCLIGVPESDRENGTKLENILQDIIQENLPNLARQANIQI
QEIQRTPQRYSSRRATPRHIIVRFTKVAMKEKILRAAREKGRVTLKEKPIRLTADLSAGT
LQARRGWGPIFNILKEKNFQPRISYPAKLTFISEGEIEYFTDKQMLRDFVTTRPALKELL
KEVLNMERNNRYQPLQNHAKM

>gi568815593f:126677509_126936261|GENSCAN_predicted_CDS_6|1506_bp
atgacaaccagccgctgcagtcacctgcccgaagtcctgccagactgcaccagctcagct
gcacccgtggtgaagacggtggaggattgtggcagcctagtgaatgggcagccgcagtat
gtcatgcaagtttcagccaaggacgggcagctgctgtcaacagtagtgcggactcttgcc
acccagagccccttcaatgaccggccgatgtgcaggatctgccacgagggcagcagccaa
gaggacttgctctctccatgtgaatgtacagggaccttggggacaattcatcggagctgc
ctggagcactggctgtcatcctcaaacaccagctactgtgaactctgccacttcaggttt
gcagtcgagcgcaaacccaggccgttagtggaggtcaaaggaaaactaacaaacagaaag
gacatccacaccaaaaacccatctgtacatcaccatcatcaaagaccaaaagtagataaa
accacaaacttggggaagaaacacagcagaaaaactggaaactctaaaaagcagagcacc
tctcctcctccaaaggaacgcaggtcctcaccagcaacagaacaaagctggatggagaat
gactttgaggagctgagagaagaaggcttcagacgatggaattactctgagctacaggag
gacattcaaaccaaaggcaaagaagttgaaaactttgaaaaaactttagaagaatgtata
acaggaataaccaatacagagaagtgcttaaaggagctgatggagctgaaaaccaaggct
cgagagcaacatgaagaatgcagaagcctcaggagccgatgcgatcaactggaagaaagg
ataccattgatggaagatgaaatgaatgaaatgaagcaagaagggaagtttagagaaaaa
agaataaaaagaaacgagcaaagcctccaagaaatatgggactatgtgaaaagaccaaat
ctatgtctgattggtgtacctgaaagtgacagggagaatggaaccaagttggaaaacatt
ctgcaggatattatccaggagaacctccccaatctagcaaggcaggccaacattcagatt
caggaaatacagagaacaccacaaagatactcctcgagaagagcaactccaagacacata
attgtcagattcaccaaagttgcaatgaaggaaaaaatcttaagggcagccagagagaaa
gggcgggttaccctcaaagagaagcccattagactaacagcagatctgtcggcaggaact
ctacaagccagaagagggtgggggccaatattcaacattcttaaagaaaagaattttcaa
cccagaatttcatatccagccaaactaaccttcataagtgaaggagaaatagaatacttt
acagacaagcaaatgctgagagattttgtcaccaccaggcctgccctaaaagagctcctg
aaggaagtgctaaatatggaaaggaacaaccggtaccagccgctgcaaaatcatgccaaa
atgtaa