GENSCAN 1.0	Date run:  5-Nov-116	Time: 10:11:35

Sequence gi568815575r:107614522_107875419 : 260898 bp : 44.32% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +  14108  14229  122  1  2   94   95   174 0.999  18.36
 1.02 Intr +  24774  24957  184  0  1   85   97   169 0.999  17.29
 1.03 Intr +  26381  26513  133  1  1   83   81    29 0.807   1.92
 1.04 Intr +  30673  30829  157  2  1   40  108   288 0.576  25.07
 1.05 Intr +  33085  33244  160  1  1   70   94   106 0.933   9.39
 1.06 Term +  35419  35511   93  0  0  145   38    27 0.952   1.23
 1.07 PlyA +  35538  35543    6                               1.05

 2.00 Prom +  40150  40189   40                              -5.76
 2.01 Init +  44476  44554   79  0  1   73  110    28 0.964   4.72
 2.02 Term +  45349  45497  149  2  2  124   38    68 0.932   3.46
 2.03 PlyA +  45693  45698    6                               1.05

 3.18 PlyA -  47656  47651    6                               1.05
 3.17 Term -  59321  59179  143  0  2   83   55    79 0.395   2.19
 3.16 Intr -  62487  62313  175  0  1   25  105    77 0.096   2.61
 3.15 Intr -  79665  79502  164  1  2   50   89    31 0.018  -0.91
 3.14 Intr -  96891  96743  149  2  2   64   48    84 0.237   1.88
 3.13 Intr - 100228 100002  227  1  2   67   78   300 0.740  23.68
 3.12 Intr - 101429 101378   52  1  1   86  101    83 0.975   8.31
 3.11 Intr - 102408 102169  240  2  0   60   91   166 0.021  10.76
 3.10 Intr - 109427 109250  178  0  1   97   25    77 0.007   1.28
 3.09 Intr - 129430 129374   57  2  0   98   81    51 0.602   4.26
 3.08 Intr - 140993 140935   59  1  2   98   18    77 0.079   0.23
 3.07 Intr - 145172 144975  198  1  0  -30   80   203 0.036   6.17
 3.06 Intr - 146107 146044   64  2  1  107   62    61 0.025   3.18
 3.05 Intr - 146789 146692   98  1  2   96   47    16 0.014  -2.05
 3.04 Intr - 161004 160579  426  2  0  109   94   691 0.817  64.71
 3.03 Intr - 161258 161048  211  0  1  143   34    34 0.838   1.47
 3.02 Intr - 161947 161823  125  0  2   82   78    90 0.663   7.63
 3.01 Init - 162779 162751   29  2  2   48  101    15 0.318  -4.03
 3.00 Prom - 167656 167617   40                              -3.86

 4.00 Prom + 167854 167893   40                              -4.16
 4.01 Init + 171299 171337   39  1  0   75   97    24 0.663   0.96
 4.02 Intr + 179628 180092  465  2  0   80  110   219 0.668  16.62
 4.03 Intr + 199234 199360  127  0  1   84   70    33 0.011   1.35
 4.04 Intr + 202280 202306   27  0  0   63   84    51 0.032   0.29
 4.05 Intr + 208596 208624   29  1  2  124   85     4 0.136   1.53
 4.06 Intr + 211742 211994  253  1  1   -2   55   159 0.015   0.61
 4.07 Intr + 216753 216906  154  1  1   88   20   119 0.012   4.23
 4.08 Intr + 226288 226864  577  1  1   86  116   533 0.142  48.62
 4.09 Intr + 240088 240183   96  0  0   32   87   138 0.214   8.31
 4.10 Term + 241583 241606   24  1  0  120   42    21 0.828  -1.08
 4.11 PlyA + 241879 241884    6                               1.05

 5.06 PlyA - 241982 241977    6                               1.05
 5.05 Term - 248151 248057   95  1  2   77   36    60 0.105  -2.31
 5.04 Intr - 249850 249782   69  2  0   74  102    38 0.145   2.95
 5.03 Intr - 250708 250654   55  1  1   92    5    56 0.137  -3.75
 5.02 Intr - 251895 251763  133  2  1   78  101    52 0.304   6.15
 5.01 Intr - 259690 259537  154  2  1   73   91    38 0.327   1.73

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init - 145165 144975  191  1  2   55   80   189 0.813  13.29


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815575r:107614522_107875419|GENSCAN_predicted_peptide_1|282_aa
MPNIKIFSGSSHQDLSQKIADRLGLELGKVVTKKFSNQETCVEIGESVRGEDVYIVQSGC
GEINDNLMELLIMINACKIASASRVTAVIPCFPYARQDKKDKSRAPISAKLVANMLSVAG
ADHIITMDLHASQIQVSVEAKYWCLKDRLNVDFALIHKERKKANEVDRMVLVGDVKDRVA
ILVDDMADTCGTICHAADKLLSAGATRVYAILTHGIFSGPAISRINNACFEAVVVTNTIP
QEDKMKHCSKIQVIDISMILAEAIRRTHNGESVSYLFSHVPL

>gi568815575r:107614522_107875419|GENSCAN_predicted_CDS_1|849_bp
atgccgaatatcaaaatcttcagcggcagctcccaccaggacttatctcagaaaattgct
gaccgcctgggcctggagctaggcaaggtggtgactaagaaattcagcaaccaggagacc
tgtgtggaaattggtgaaagtgtacgtggagaggatgtctacattgttcagagtggttgt
ggcgaaatcaatgacaatttaatggagcttttgatcatgattaatgcctgcaagattgct
tcagccagccgggttactgcagtcatcccatgcttcccttatgcccggcaggataagaaa
gataagagccgggcgccaatctcagccaagcttgttgcaaatatgctatctgtagcaggt
gcagatcatattatcaccatggacctacatgcttctcaaattcaggtatcagtggaagct
aaatattggtgtttgaaagacaggctgaatgtggactttgccttgattcacaaagaacgg
aagaaggccaatgaagtggaccgcatggtgcttgtgggagatgtgaaggatcgggtggcc
atccttgtggatgacatggctgacacttgtggcacaatctgccatgcagctgacaaactt
ctctcagctggcgccaccagagtttatgccatcttgactcatggaatcttctccggtcct
gctatttctcgcatcaacaacgcatgctttgaggcagtagtagtcaccaataccatacct
caggaggacaagatgaagcattgctccaaaatacaggtgattgacatctctatgatcctt
gcagaagccatcaggagaactcacaatggagaatccgtttcttacctattcagccatgtc
cctttataa

>gi568815575r:107614522_107875419|GENSCAN_predicted_peptide_2|75_aa
MKRGRNYVVKDEVNSGAWHISQPSNKEKFATASRFMKLPFSLQTAEGLISTNSMSLANIW
EGKFAKVLEAQQNFD

>gi568815575r:107614522_107875419|GENSCAN_predicted_CDS_2|228_bp
atgaagagagggaggaattacgtggtgaaggatgaagtgaacagcggtgcttggcatata
agccagccctcaaacaaggagaaatttgctacagcctctagatttatgaaattgcccttc
tctctgcagacagcagagggcctcattagcacaaactcaatgtcactggcaaatatatgg
gaaggaaagtttgccaaggttctagaagcacagcaaaactttgattaa

>gi568815575r:107614522_107875419|GENSCAN_predicted_peptide_3|864_aa
MRGWGVLTEIGNRSPCTPPPQKKGGFGGRQFKATTLGALEGVVSSVGGPIRGPPQSPLTL
GKLGTALGPRVAPQGGGPRPQEEGEEKEEEEEVSPKDPLGAVCPAVSIRTRSSTARRGPS
RSLSFPGTLESPQASSVGAHLPAAPDLAGQATSEPEKMAQSKLDCRSPVGLDCCNCCLDL
AHRSGLQRGSSGENNNPGSPTVSNFRQLQEKLVFENLNTDKLNSIMRQDSLEPVLRDPCY
LINEGICNRNIDQTMLSILLFFHRGAGSSSPCGELGWASLPSQGPGEATKEQRTLARLVT
TPCTSTCILDGDTEAQNCCEMKVERLEEPQLVEEPQLGEDPELGEEAQFLEELQLEVVES
GSDLDPEDLGSSPDFATNLMLELEAHLVDFTKASPGEKQKDDEGYTLGPQVEYYYIWTGK
EQENLCHFKDHPFYSEAHNGGRCSCPLHKPLVCCTPIPNKILLVAVFQALPIAPKSFTCY
SNLRAGLQRRAQPSAACQQPPSRPAAQPRTKPGQSFLAARAMNTEMYQTPMEVAVYQLHN
FSISFFSSLLGGDVVSVKLDNSASGASVVAIDNKIEQAMDLVKNHLMYAVREEVEILKEQ
IRELVEKNSQLERENTLLKTLASPEQLEKFQSCLSPEEPAPESPQVPEAPGGSAVLPMPD
LQLNEKKQMKKGNLENSPTTPQTSLVIKPFSTRKGKKLAPQSHSDHNGIKQEINNRKIVE
NPENTWRLNNTLPSNTWIKEVSTEILKYFELNENENIGQAASKPMLISITCLWPPSPVTG
STCRPTRPRLGERKACGPPCGRQTRAGPGRFALPGAPEPLKQGFPFSASTRHLHIPLAIA
LTARFSGLCTFIVIISIVISATTD

>gi568815575r:107614522_107875419|GENSCAN_predicted_CDS_3|2595_bp
atgcgggggtggggagtactgactgaaataggcaaccgctctccttgcacgccccccccc
cagaaaaaggggggctttggagggcggcagtttaaggctacaacacttggggctctcgag
ggcgtcgtctcttctgtagggggacccattcgaggtccgccccaatccccgctcacactt
gggaaacttgggactgcgctggggccgcgtgtggcacctcaggggggcggcccccggcct
caagaggagggggaggagaaggaggaagaggaggaagtgagcccgaaggatccgctcgga
gctgtttgtccagctgtttctattcgcacccggagcagtacagccagaagggggccgagc
cgaagcttgtcttttccaggcaccctggagtcccctcaggccagctcggtgggcgcgcac
ctgccagccgcccctgacctcgcaggccaggcgacctccgagcctgagaagatggcccag
tccaagctcgattgccgctcacctgtcggcctcgactgctgcaactgctgcctggacctg
gcccatcggagtgggctccagcgaggcagcagcggggagaacaacaacccgggcagccct
acagtgagcaactttcggcagctgcaggaaaagctggtctttgagaacctcaataccgac
aagctcaacagcataatgcggcaggattcgctagagccggtgctgcgggacccctgctac
ctgatcaacgagggcatctgcaaccgcaacatcgaccagaccatgctctccatcctgctc
ttcttccacagaggggcaggaagttctagcccttgtggggagctaggatgggcttctctg
ccctcacaaggccctggagaggccaccaaggagcagaggacattagccaggttggtgacc
acaccttgtacctccacgtgcatcttagatggagacacagaggctcagaactgctgtgag
atgaaggtggaaaggctggaggagccccagctcgtggaggaaccccaactcggggaggac
ccagagcttggggaggaggcacagttcctggaggagctacagctcgaggtggtagaaagt
gggtcagatttggatccagaagatttgggttcgagtccagactttgccaccaatctgatg
cttgagcttgaggctcaccttgtggatttcacgaaggcaagccctggagagaagcagaaa
gacgatgaaggctacacacttgggcctcaagtggagtattactacatctggactgggaag
gagcaagagaacctctgccacttcaaagatcacccattctatagcgaggcccacaatgga
ggcaggtgctcctgccctcttcacaagcccctcgtctgctgcacccccatccccaacaag
atcctcctggttgctgtcttccaagcattgccaatagcccccaagtccttcacatgctac
tcaaacctcagggccggactccagcgcagagcccagcccagcgcagcctgccagcagcca
cccagccgcccagccgcccagccccgcacgaaacccggccagagcttcctagcagcccga
gccatgaacaccgaaatgtatcagacccccatggaggtggcggtctaccagctgcacaat
ttctccatctccttcttctcttctctgcttggaggggatgtggtttccgttaagctggac
aacagtgcctccggagccagcgtggtggccatagacaacaagatcgaacaggccatggat
ctggtgaagaatcatctgatgtatgctgtgagagaggaggtggagatcctgaaggagcag
atccgagagctggtggagaagaactcccagctagagcgtgagaacaccctgttgaagacc
ctggcaagcccagagcagctggagaagttccagtcctgtctgagccctgaagagccagct
cccgaatccccacaagtgcccgaggcccctggtggttctgcggtacttcccatgccagac
ttgcagctgaatgagaaaaagcagatgaaaaaaggaaacctagaaaatagcccaacaacg
ccccaaacctctctggtcatcaagcctttctctacaagaaaggggaaaaaactggcccca
cagtcacatagtgaccacaatggaattaaacaagaaatcaataacaggaagatagttgaa
aatcctgaaaatacttggagattaaacaacacacttccaagtaacacatggatcaaagaa
gtctcaacagaaattttaaaatattttgaactaaatgaaaatgaaaatataggccaggcg
gcttccaagcccatgctgatcagcatcacttgcctctggccaccctcccctgtgaccggc
agcacatgtcgccccacgcggccccggcttggggagcgtaaggcatgtgggcctccatgc
ggccgccagacgagggcgggaccgggacgcttcgccctgcctggggctcctgagcccctg
aaacagggctttcctttctctgccagcactaggcatctccacattcctctggccattgct
ctgactgctaggttctcgggcctctgcaccttcatcgttattattagcatcgttatatca
gctaccactgattga

>gi568815575r:107614522_107875419|GENSCAN_predicted_peptide_4|596_aa
MLLTVFLSELRIQVFSGGVTAAKLDRKRPSACCPTSTMSKDLKILCKDPALELSCYRDHQ
FSGRKFQQEKLLKESSTLNMGNLSFYTTEEKIHELFSRSDIRNIFMGLDKIKKTACGFCF
VECHNRADAENAMRFLTGTCLDEWIICTDWDVGFREGQQYGRGKSGGQAWSKFLAWSYRF
RCHQDEGKNGSIHILGADDEGGSHKGQSKNTNISTYYEPGSLLVIVFEKRQRRRRRAAAY
SGSGGGGDRGPGARAGARANPLRRQTRAQRPRASGGDGWHLGTLWVKRAPSPRPWRSSVV
ALAGLVSGSGRFSGQTPLVDERHPQSLDHRLTETEQSDNKPIIQSEIVLKHEIPVFAICL
DRSIILCFSCAHRILVSSCSSGESIEPITAFQCPTCRYVISLNHRGLDGLKRNVTLQNII
DRFQKASVSGPNSPSESRRERTYRPTTAMSSERIACQFCEQDPPRDAVKTCITCEVSYCD
RCLRATHPNKKPFTSHRLVEPVPDTHLRGITCLDHENEKVNMYCVSDDQLICALCKLVGR
HRDHQVASLNDRFEKLKQTLEMNLTNLVKRNSELENQMAKLIQICQQVEVSQVMML

>gi568815575r:107614522_107875419|GENSCAN_predicted_CDS_4|1791_bp
atgctgcttactgtcttcctctctgagctgagaatccaggttttcagtggtggtgtcact
gctgccaagctggaccgaaaacggccatcggcatgctgcccaaccagcaccatgtccaaa
gacctgaaaattctatgtaaagaccctgctttggagctgagctgctaccgggaccatcag
ttcagtggccgtaaatttcagcaggaaaaattactgaaggaaagctccacattgaatatg
gggaatctttccttttatacaaccgaagagaaaatacatgaactctttagtagatctgat
atcaggaatatctttatgggcctggataaaataaagaaaacagcatgtggtttttgcttt
gtagaatgccataacagagctgatgctgaaaatgccatgcggtttctaactgggacctgc
ctagatgaatggattatctgcactgattgggatgtcggttttagagagggtcaacagtat
ggtcgcggtaaatctgggggtcaggcttggagtaaatttctggcctggagctatagattc
aggtgtcatcaggatgagggtaaaaatggaagcatccacattttaggggctgatgatgaa
ggaggatcacacaaaggacaaagtaagaacacaaatatcagcacctactatgagccaggc
tccttgctcgtaattgtttttgaaaagcggcagcggcggcgaaggcgggcggcggcctac
agtggtagcggcggcggcggcgaccggggcccgggagctcgcgccggagcccgagccaac
ccgctgcggaggcagacgagagcccagcgccctcgagcgagcggaggagatggctggcac
ctgggaacgctatgggtaaaacgcgccccctcgccgcggccctggaggtcgagcgtcgta
gccctcgcagggctagtctccggctccggccgcttttcaggtcagactccgctggttgat
gaacggcatccccagtctctggatcatcgtcttactgagaccgaacaatctgataacaaa
cccatcatacaatctgaaatcgtcctgaaacatgaaatcccagtatttgcaatttgcctg
gataggagcataatcctctgcttcagctgtgcccatcgcattttggtatcaagctgcagc
tctggtgaatccattgaacccattactgctttccagtgtcctacctgcaggtatgttatc
tcgctgaaccaccggggcctggatggcctcaagaggaatgtgactctgcagaacattatt
gatcgcttccagaaggcttcagtcagtgggcccaattcccctagtgagagccgccgggaa
aggacttacaggcccaccactgccatgtctagcgagcgaattgcttgccaattctgtgag
caggacccgccaagggatgcagtaaaaacatgcatcacctgtgaggtctcctactgtgac
cgttgcctgcgggccacgcaccccaacaagaaacctttcaccagccaccgcctggtggaa
ccagtgccagacacacatcttcgagggatcacctgcctggaccatgagaatgagaaagtg
aacatgtactgtgtatctgatgaccaattgatctgtgccttatgcaaactggtgggtcgt
caccgagaccatcaggtcgcatccctgaatgatcgatttgagaaactcaagcaaactctg
gagatgaacctcaccaacctggttaagcgcaacagcgaactagaaaatcaaatggccaaa
ctaatacagatctgccagcaggttgaggtatcacaggtcatgatgctgtga

>gi568815575r:107614522_107875419|GENSCAN_predicted_peptide_5|168_aa
XEAGKLEHDCEQLVVQTYVTREDLKETLLENPNWILFTDRSSFVEQGIHKASGFAADILF
LTEMEYESMKVFNFALWPADNMQFAYSSVIYFYFLNTISTIISDLQNTAHGAMGCNSLSS
VPHEGLSEYGELLWAIKGSNQEEFGQDNGQIYLSINTKNLLDILAEGQ

>gi568815575r:107614522_107875419|GENSCAN_predicted_CDS_5|507_bp
naggaagctgggaagcttgaacatgactgtgaacagctagtagtacagacctatgtgacc
agagaggatctcaaggaaaccctcttagagaacccaaactggattctctttacagacaga
agttcttttgtagaacaagggatacataaggcaagtggctttgctgctgatatcctgttt
ttgacagaaatggagtacgaaagcatgaaggtgtttaattttgctctctggcctgcagac
aatatgcaatttgcgtattcatctgtgatatatttttacttcttaaataccataagcaca
ataatcagcgacttgcaaaacactgcacatggagccatgggttgcaactccctctcctct
gtaccccatgaagggctgtcagaatatggagagctgctctgggctattaaaggcagtaat
caagaagaatttgggcaggataatgggcaaatttacttaagtatcaacacgaagaatctt
ttggatattcttgcagaagggcagtaa