GENSCAN 1.0	Date run:  4-Nov-116	Time: 20:05:31

Sequence gi568815586f:118276692_118514430 : 237739 bp : 41.82% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.03 PlyA -   1455   1450    6                               1.05
 1.02 Term -   6229   5990  240  1  0   66   47   205 0.752   9.24
 1.01 Init -  18551  18549    3  2  0   98   95     0 0.066   1.75
 1.00 Prom -  63494  63455   40                              -1.75

 2.00 Prom +  64827  64866   40                              -5.45
 2.01 Init + 100001 100142  142  1  1   92  113   351 0.986  36.34
 2.02 Intr + 103471 103540   70  2  1   57   79   112 0.846   4.52
 2.03 Intr + 107321 107376   56  2  2  102   81    58 0.554   4.20
 2.04 Intr + 109423 109494   72  2  0   39  110    64 0.737   2.16
 2.05 Intr + 112504 112610  107  2  2   35   53   105 0.759   0.71
 2.06 Intr + 114435 114591  157  2  1   82   75   271 0.859  23.86
 2.07 Intr + 126721 126826  106  2  1   46   80   122 0.171   5.55
 2.08 Intr + 134382 134466   85  0  1   98   59    55 0.128   2.50
 2.09 Term + 137644 137742   99  0  0  120   38    86 0.234   3.95
 2.10 PlyA + 138285 138290    6                               1.05

 3.03 PlyA - 138462 138457    6                               1.05
 3.02 Term - 142987 142899   89  2  2   78   43   102 0.482   1.54
 3.01 Init - 146590 146545   46  1  1   62   98    45 0.389   3.80
 3.00 Prom - 146735 146696   40                              -3.75

 4.00 Prom + 158833 158872   40                              -5.45
 4.01 Init + 165905 165923   19  1  1   78  115    21 0.214   4.06
 4.02 Term + 176217 176302   86  1  2   70   54    96 0.450   1.24
 4.03 PlyA + 176614 176619    6                               1.05

 5.00 Prom + 177497 177536   40                              -3.65
 5.01 Init + 184276 184440  165  0  0   80  116    68 0.765   8.50
 5.02 Intr + 187625 187658   34  1  1   75  106    35 0.487   0.88
 5.03 Intr + 190961 191102  142  0  1   49   84    53 0.383  -0.51
 5.04 Intr + 192416 192574  159  2  0   61   87    63 0.698   1.68
 5.05 Term + 195310 195397   88  1  1   44   48   158 0.935   3.55
 5.06 PlyA + 195464 195469    6                               1.05

 6.08 PlyA - 197023 197018    6                               1.05
 6.07 Term - 201689 201362  328  1  1   46   50   132 0.634  -1.60
 6.06 Intr - 201911 201759  153  1  0   -5  109   137 0.504   4.77
 6.05 Intr - 205793 205567  227  2  2  126   32    64 0.264   0.46
 6.04 Intr - 210877 210394  484  0  1   97   80   207 0.831  12.90
 6.03 Intr - 211843 211774   70  2  1  133   83    52 0.964   6.52
 6.02 Intr - 215752 215666   87  2  0   51   90    51 0.572   0.62
 6.01 Init - 229258 229177   82  1  1   77  102    40 0.230   5.48
 6.00 Prom - 229934 229895   40                              -4.45

 7.02 PlyA - 231007 231002    6                               1.05
 7.01 Term - 237265 237110  156  1  0   76   52   112 0.534   3.35

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init -  96563  96508   56  2  2   91   55    61 0.923   3.01
S.002 Term + 116002 116168  167  2  2   70   48   103 0.847   1.60


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815586f:118276692_118514430|GENSCAN_predicted_peptide_1|80_aa
MVEASVLPSAVDTAKGVQVDIPSSVAWQLSGGHVTLVNQILPPRTLNLASSGHSRDDCGS
CEDDKSPVEQNRMMMASTAS

>gi568815586f:118276692_118514430|GENSCAN_predicted_CDS_1|243_bp
atggtggaagccagtgttcttccttctgctgtggatacagcgaaaggagtacaggtcgat
attccatcttcagttgcctggcagctttcaggcgggcatgtgactttggtcaatcagata
ctcccacccagaactttgaatcttgcaagctcagggcacagcagagatgattgtggcagt
tgtgaagatgataagagtccagtagagcagaatcgaatgatgatggcatcaacagcatcc
taa

>gi568815586f:118276692_118514430|GENSCAN_predicted_peptide_2|297_aa
MSAAGLLAPAPAQAGAPPAPEYYPEEDEELESAEDDERSCRGRESDEDTEDASETDLAKH
DEEDYVEMKEQMYQDKLASLKRQLQQLQEGTLQEYQKRMKKLDQQYKERIRNAGCGPLGC
FPPPAACPPTLPQPVGELSSTELVPGAKKTEQVERNYIKEKKAAVKEFEDKKVELKENLI
AELEEKKKMIENEKLTMELTGASPSSPEHLPATPAESPAQRFEARIEDGKLYYDKRWYHK
SQAIYLESKDNQKLSCVISSVGANEIWVRKTSDSTKMRIYLGQLQRGLFVIRRRSAA

>gi568815586f:118276692_118514430|GENSCAN_predicted_CDS_2|894_bp
atgagtgccgcggggctgctggccccggccccggcccaggctggagcgccgccggccccc
gagtactaccccgaggaggatgaagagctggagagcgccgaggacgacgagcgcagctgt
cggggccgcgagtcggacgaagacactgaggatgctagtgaaactgacctggcaaagcat
gatgaagaagactatgtagaaatgaaggaacagatgtatcaggacaaactggcttctctc
aagaggcagttgcaacaactgcaagaaggtacattacaggaatatcagaagagaatgaaa
aaactagatcagcagtacaaagagaggatacggaatgcaggctgcggaccactgggctgc
tttcccccacctgccgcctgcccccctaccctgccccagcccgtgggagaattgtcttcc
accgaactggtccctggtgccaaaaagactgaacaagtggaacgaaattacattaaagaa
aagaaggcagcagtgaaagaatttgaagacaagaaggttgagctgaaagagaacctgatt
gctgagctagaagaaaagaagaaaatgattgaaaatgaaaagctgacaatggaactgact
ggagcatctccatcctctcctgagcacttgcctgcaacacccgcggaatctccagcccag
aggttcgaagctcggatagaagatggcaaactgtactatgacaaaagatggtaccacaag
agccaggccatctatctggagtcaaaggacaaccagaaactgagctgcgtgatcagttct
gtaggagccaatgagatctgggtgaggaagacaagtgacagcaccaagatgaggatctac
ctgggccagcttcagcgcgggctcttcgtgatccgccggcgctcagctgcttga

>gi568815586f:118276692_118514430|GENSCAN_predicted_peptide_3|44_aa
MFERRGLIKVGERESVPLQEGMPWKGPVTSEHQDAEGPTPYRHF

>gi568815586f:118276692_118514430|GENSCAN_predicted_CDS_3|135_bp
atgtttgagagaagaggactgatcaaagtaggagaaagggaatcagtgcctctacaggag
ggcatgccatggaaaggtccagtgacatcagagcatcaagatgctgaaggcccaactcca
taccgacatttttag

>gi568815586f:118276692_118514430|GENSCAN_predicted_peptide_4|34_aa
MKQLAQATVTVDAPVRTQAMGAEPRPPTVDMECE

>gi568815586f:118276692_118514430|GENSCAN_predicted_CDS_4|105_bp
atgaagcaactcgcccaagccacagtgacagttgatgctccagttagaactcaggcaatg
ggagcagagccccggcctcctacagtggacatggagtgtgagtga

>gi568815586f:118276692_118514430|GENSCAN_predicted_peptide_5|195_aa
MGTGRKWSRETGQMTLTLSEGRVWEGFEKRFRGGKVWLRKCLDLGIRKRKEVKVKVFGKQ
VVFGYMVPLQLPWENYQASMSDGERPVLWSQVVPVMIQARAILDQPTARQPPDMLCMTTL
NPWVDTNHSASSIMIMAHNYIKLIRCRYCPKCFTRINSFSLHKNPMRGCGPVETTSAFSF
VTVDDNYQIINRSVT

>gi568815586f:118276692_118514430|GENSCAN_predicted_CDS_5|588_bp
atggggacaggaaggaagtggagcagggagactggccagatgacactgacattgtcagag
ggaagagtatgggaaggatttgagaaacgtttcagaggtggaaaggtttggctcaggaag
tgcctggatttagggataagaaagagaaaggaggtgaaagtgaaggtttttgggaaacag
gtggtgtttggttacatggttcctctgcaattgccatgggaaaattaccaggctagcatg
tcagacggtgagaggccagtcttgtggagccaagttgtcccagtcatgatccaagctagg
gccatcctagatcagccaacagctagacaaccaccagacatgctctgtatgactacacta
aacccatgggtggacaccaatcattctgcttcatcaatcatgataatggcacacaattac
ataaagcttattagatgccgatactgtcctaaatgctttacacgtattaactcatttagt
cttcacaaaaaccctatgaggggatgtggccccgtggaaacaacaagtgcgttcagcttt
gtgactgtggatgataattatcaaattattaaccggagcgttacgtga

>gi568815586f:118276692_118514430|GENSCAN_predicted_peptide_6|476_aa
MKPNTSCEHIQGTRYNFVLGPTDRDREGHAKVSLNWIGKALANLTSLGYKNEIGVRAPVQ
EALCQFQPEHPTLDTNPAVWEFLHITQSFNLTWYDIYIILTSTLTSDEKECIWHSAETHA
DELHNQAPIQNPVANGAVPCRDPDWTYQQGDNGISRRDHMVTCLLAVMDKSAHKAVNYEK
LREITQEPQENPALFLSCLTDAMLKYTNLYPESKEDQTFLHLQFISICPRNQEKKLQNLG
QDPLPFTSPESWRKKKTNPRKPLMSLSLPNFHHFLTNLVTDLQWYPYETPITHPEQLLTV
LWDLWLQGTFQDLKLPKVSASLQDEIGSRKKGSPEITKPPADAHKKARQPNPRASAEMGR
SLQIAAHSLANQSSLLGKRRALRRNCEEKNSNRTRTVGQRKEKVRTQAEEGSSERTHLKV
LGHIFDYLVKTTEDESLETGSLISYPSMISPQKSIGNLTSVQNKSKSVTVKSHPKF

>gi568815586f:118276692_118514430|GENSCAN_predicted_CDS_6|1431_bp
atgaagccaaacacttcatgtgaacatattcagggaacacgctacaactttgtgctgggg
cctacagacagagacagagaaggacatgccaaggtatcgttaaactggattggcaaggca
ttagccaatctcacatctctgggctacaaaaatgagattggggttagagctccagtccag
gaggccctttgccaattccaaccagaacatccaacattggacactaatccagccgtgtgg
gaatttctacacataacccaatcctttaatttaacttggtatgacatttatataattcta
acctccaccctcacttctgatgaaaaagagtgcatctggcattcagctgaaacacatgca
gatgaactccataatcaagcccctatacaaaatccagtggccaatggtgctgtcccctgt
agagacccagattggacttaccaacagggagacaatggcatcagccgaagagaccacatg
gttacctgtctgctcgctgtcatggacaaaagtgctcataaggcagttaactatgaaaaa
cttagagaaattacacaagagccccaggaaaatcctgcccttttcttatcatgcctcact
gacgctatgttaaaatataccaatttgtacccagaatctaaagaagatcaaacttttctc
caccttcagtttatttcaatctgccccagaaatcaggaaaagaaattacaaaacttaggc
caggacccacttcccttcacctcacctgaatcctggaggaaaaagaagacaaatccacgt
aagccacttatgtctctttctctcccaaactttcatcacttcctaaccaaccttgttaca
gacctccagtggtacccttacgaaactcccattacacatcctgagcaactccttactgtt
ctatgggacctatggcttcaaggaactttccaggacttgaagttacccaaagtatcagca
tctttgcaagacgaaatagggagtagaaaaaagggctcccctgagatcaccaaaccacca
gctgatgctcataagaaagcaaggcagcccaacccgagagcatcagctgaaatggggagg
agtctgcagattgcagctcacagtctagcaaatcaaagctcccttctagggaaaaggcgt
gcactgaggagaaactgtgaagagaagaattcaaacaggacaaggacagtggggcagagg
aaagagaaggtccggacacaagcagaagagggaagtagtgaaagaacacatctgaaagta
ttaggccatatttttgattacttagtaaaaacaactgaagatgaatctctagagacagga
agtttgataagttatcctagtatgatttctccacagaaaagtataggaaatctcacttca
gtacaaaacaagtcaaaaagtgtcactgtcaaatctcatccaaaattctga

>gi568815586f:118276692_118514430|GENSCAN_predicted_peptide_7|51_aa
TCTPSPTVKEHSDPMGHTCETTDDFSIASSAEVHFSASHRDGPGCISTALA

>gi568815586f:118276692_118514430|GENSCAN_predicted_CDS_7|156_bp
acttgcactcccagccccactgtcaaagaacacagtgaccccatgggacatacatgtgag
actacagatgacttttccatcgccagctcagctgaagtgcatttctctgcatcacacaga
gatggccctggctgtatcagcacagctctcgcttga