Result of FASTA (ccds) for
pF1KB9873
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
Query: pF1KB9873, 499 aa
1>>>pF1KB9873 499 - 499 aa - 499 aa
Library: human.CCDS.faa
18511270 residues in 32554 sequences
Statistics: Expectation_n fit: rho(ln(x))= 5.3660+/-0.000974; mu= 17.6414+/- 0.059
mean_var=76.6577+/-15.961, 0's: 0 Z-trim(105.1): 142 B-trim: 28 in 1/49
Lambda= 0.146486
statistics sampled from 8094 (8252) to 8094 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
ktup: 2, E-join: 1 (0.624), E-opt: 0.2 (0.253), width: 16
Scan time: 3.110
The best scores are: opt bits E(32554)
CCDS827.1 KCNA2 gene_id:3737|Hs108|chr1 ( 499) 3297 706.7 1.4e-203
CCDS8535.1 KCNA1 gene_id:3736|Hs108|chr12 ( 495) 2596 558.6 5.7e-159
CCDS828.2 KCNA3 gene_id:3738|Hs108|chr1 ( 575) 2392 515.5 6.1e-146
CCDS41629.1 KCNA4 gene_id:3739|Hs108|chr11 ( 653) 2188 472.4 6.4e-133
CCDS55625.1 KCNA2 gene_id:3737|Hs108|chr1 ( 356) 2014 435.5 4.6e-122
CCDS826.1 KCNA10 gene_id:3744|Hs108|chr1 ( 511) 1940 420.0 3.1e-117
CCDS12755.1 KCNA7 gene_id:3743|Hs108|chr19 ( 456) 1884 408.1 1.1e-113
CCDS8534.1 KCNA6 gene_id:3742|Hs108|chr12 ( 529) 1236 271.2 2e-72
CCDS8536.1 KCNA5 gene_id:3741|Hs108|chr12 ( 613) 932 207.0 4.9e-53
CCDS13418.1 KCNB1 gene_id:3745|Hs108|chr20 ( 858) 824 184.3 4.7e-46
CCDS6209.1 KCNB2 gene_id:9312|Hs108|chr8 ( 911) 808 180.9 5.1e-45
CCDS6279.1 KCNS2 gene_id:3788|Hs108|chr8 ( 477) 662 149.9 6e-36
CCDS1692.1 KCNS3 gene_id:3790|Hs108|chr2 ( 491) 656 148.6 1.5e-35
CCDS44547.1 KCNC1 gene_id:3746|Hs108|chr11 ( 585) 650 147.4 4.1e-35
CCDS1676.1 KCNF1 gene_id:3754|Hs108|chr2 ( 494) 642 145.6 1.2e-34
CCDS7827.1 KCNC1 gene_id:3746|Hs108|chr11 ( 511) 631 143.3 5.9e-34
CCDS9006.1 KCNC2 gene_id:3747|Hs108|chr12 ( 558) 623 141.7 2.1e-33
CCDS58255.1 KCNC2 gene_id:3747|Hs108|chr12 ( 583) 623 141.7 2.1e-33
CCDS9005.1 KCNC2 gene_id:3747|Hs108|chr12 ( 613) 623 141.7 2.2e-33
CCDS58257.1 KCNC2 gene_id:3747|Hs108|chr12 ( 618) 623 141.7 2.2e-33
CCDS58256.1 KCNC2 gene_id:3747|Hs108|chr12 ( 629) 623 141.7 2.3e-33
CCDS13342.1 KCNS1 gene_id:3787|Hs108|chr20 ( 526) 622 141.4 2.3e-33
CCDS9007.1 KCNC2 gene_id:3747|Hs108|chr12 ( 638) 623 141.7 2.3e-33
CCDS6314.1 KCNV1 gene_id:27012|Hs108|chr8 ( 500) 621 141.2 2.5e-33
CCDS44193.1 KCNC4 gene_id:3749|Hs108|chr1 ( 626) 619 140.9 4e-33
CCDS821.1 KCNC4 gene_id:3749|Hs108|chr1 ( 635) 619 140.9 4.1e-33
CCDS13436.1 KCNG1 gene_id:3755|Hs108|chr20 ( 513) 611 139.1 1.1e-32
CCDS12793.1 KCNC3 gene_id:3748|Hs108|chr19 ( 757) 610 139.0 1.8e-32
CCDS10945.1 KCNG4 gene_id:93107|Hs108|chr16 ( 519) 604 137.6 3.1e-32
CCDS12019.1 KCNG2 gene_id:26251|Hs108|chr18 ( 466) 578 132.1 1.3e-30
CCDS42674.1 KCNG3 gene_id:170850|Hs108|chr2 ( 425) 551 126.4 6.3e-29
CCDS5776.1 KCND2 gene_id:3751|Hs108|chr7 ( 630) 537 123.5 6.7e-28
CCDS1809.1 KCNG3 gene_id:170850|Hs108|chr2 ( 436) 534 122.8 7.8e-28
CCDS14314.1 KCND1 gene_id:3750|Hs108|chrX ( 647) 533 122.7 1.2e-27
CCDS6447.1 KCNV2 gene_id:169522|Hs108|chr9 ( 545) 523 120.5 4.6e-27
CCDS844.1 KCND3 gene_id:3752|Hs108|chr1 ( 636) 519 119.7 9.4e-27
CCDS843.1 KCND3 gene_id:3752|Hs108|chr1 ( 655) 519 119.7 9.6e-27
CCDS7736.1 KCNQ1 gene_id:3784|Hs108|chr11 ( 676) 322 78.1 3.4e-14
CCDS13521.1 KCNQ2 gene_id:3785|Hs108|chr20 ( 393) 299 73.1 6.4e-13
CCDS46629.1 KCNQ2 gene_id:3785|Hs108|chr20 ( 841) 299 73.3 1.2e-12
CCDS13518.1 KCNQ2 gene_id:3785|Hs108|chr20 ( 844) 299 73.3 1.2e-12
CCDS13519.1 KCNQ2 gene_id:3785|Hs108|chr20 ( 854) 299 73.3 1.2e-12
CCDS13520.1 KCNQ2 gene_id:3785|Hs108|chr20 ( 872) 299 73.3 1.2e-12
CCDS456.1 KCNQ4 gene_id:9132|Hs108|chr1 ( 695) 288 70.9 5e-12
CCDS55035.1 KCNQ5 gene_id:56479|Hs108|chr6 ( 822) 277 68.7 2.9e-11
CCDS55037.1 KCNQ5 gene_id:56479|Hs108|chr6 ( 923) 277 68.7 3.1e-11
CCDS4976.1 KCNQ5 gene_id:56479|Hs108|chr6 ( 932) 277 68.7 3.2e-11
CCDS55034.1 KCNQ5 gene_id:56479|Hs108|chr6 ( 951) 277 68.7 3.2e-11
>>CCDS827.1 KCNA2 gene_id:3737|Hs108|chr1 (499 aa)
initn: 3297 init1: 3297 opt: 3297 Z-score: 3768.1 bits: 706.7 E(32554): 1.4e-203
Smith-Waterman score: 3297; 100.0% identity (100.0% similar) in 499 aa overlap (1-499:1-499)
10 20 30 40 50 60
pF1KB9 MTVATGDPADEAAALPGHPQDTYDPEADHECCERVVINISGLRFETQLKTLAQFPETLLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 MTVATGDPADEAAALPGHPQDTYDPEADHECCERVVINISGLRFETQLKTLAQFPETLLG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 DPKKRMRYFDPLRNEYFFDRNRPSFDAILYYYQSGGRLRRPVNVPLDIFSEEIRFYELGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 DPKKRMRYFDPLRNEYFFDRNRPSFDAILYYYQSGGRLRRPVNVPLDIFSEEIRFYELGE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 EAMEMFREDEGYIKEEERPLPENEFQRQVWLLFEYPESSGPARIIAIVSVMVILISIVSF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 EAMEMFREDEGYIKEEERPLPENEFQRQVWLLFEYPESSGPARIIAIVSVMVILISIVSF
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 CLETLPIFRDENEDMHGSGVTFHTYSNSTIGYQQSTSFTDPFFIVETLCIIWFSFEFLVR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 CLETLPIFRDENEDMHGSGVTFHTYSNSTIGYQQSTSFTDPFFIVETLCIIWFSFEFLVR
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 FFACPSKAGFFTNIMNIIDIVAIIPYFITLGTELAEKPEDAQQGQQAMSLAILRVIRLVR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 FFACPSKAGFFTNIMNIIDIVAIIPYFITLGTELAEKPEDAQQGQQAMSLAILRVIRLVR
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 VFRIFKLSRHSKGLQILGQTLKASMRELGLLIFFLFIGVILFSSAVYFAEADERESQFPS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 VFRIFKLSRHSKGLQILGQTLKASMRELGLLIFFLFIGVILFSSAVYFAEADERESQFPS
310 320 330 340 350 360
370 380 390 400 410 420
pF1KB9 IPDAFWWAVVSMTTVGYGDMVPTTIGGKIVGSLCAIAGVLTIALPVPVIVSNFNYFYHRE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 IPDAFWWAVVSMTTVGYGDMVPTTIGGKIVGSLCAIAGVLTIALPVPVIVSNFNYFYHRE
370 380 390 400 410 420
430 440 450 460 470 480
pF1KB9 TEGEEQAQYLQVTSCPKIPSSPDLKKSRSASTISKSDYMEIQEGVNNSNEDFREENLKTA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 TEGEEQAQYLQVTSCPKIPSSPDLKKSRSASTISKSDYMEIQEGVNNSNEDFREENLKTA
430 440 450 460 470 480
490
pF1KB9 NCTLANTNYVNITKMLTDV
:::::::::::::::::::
CCDS82 NCTLANTNYVNITKMLTDV
490
>>CCDS8535.1 KCNA1 gene_id:3736|Hs108|chr12 (495 aa)
initn: 2528 init1: 1034 opt: 2596 Z-score: 2967.5 bits: 558.6 E(32554): 5.7e-159
Smith-Waterman score: 2596; 80.3% identity (90.9% similar) in 503 aa overlap (1-499:1-495)
10 20 30 40 50
pF1KB9 MTVATGDPADEAAALPGHPQD-TYDPEADH---ECCERVVINISGLRFETQLKTLAQFPE
::: .:. .:::.: :::::: .: .::: ::::::::::::::::::::::::::.
CCDS85 MTVMSGENVDEASAAPGHPQDGSYPRQADHDDHECCERVVINISGLRFETQLKTLAQFPN
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB9 TLLGDPKKRMRYFDPLRNEYFFDRNRPSFDAILYYYQSGGRLRRPVNVPLDIFSEEIRFY
::::.::::::::::::::::::::::::::::::::::::::::::::::.:::::.::
CCDS85 TLLGNPKKRMRYFDPLRNEYFFDRNRPSFDAILYYYQSGGRLRRPVNVPLDMFSEEIKFY
70 80 90 100 110 120
120 130 140 150 160 170
pF1KB9 ELGEEAMEMFREDEGYIKEEERPLPENEFQRQVWLLFEYPESSGPARIIAIVSVMVILIS
:::::::: ::::::.::::::::::.:.::::::::::::::::::.::::::::::::
CCDS85 ELGEEAMEKFREDEGFIKEEERPLPEKEYQRQVWLLFEYPESSGPARVIAIVSVMVILIS
130 140 150 160 170 180
180 190 200 210 220 230
pF1KB9 IVSFCLETLPIFRDENEDMHGSGVTFHTYSNSTIGYQQSTSFTDPFFIVETLCIIWFSFE
:: ::::::: ..:. .:. : : : .:.:. :. :. :::::::::::::::::::
CCDS85 IVIFCLETLPELKDD-KDFTG---TVHRIDNTTVIYN-SNIFTDPFFIVETLCIIWFSFE
190 200 210 220 230
240 250 260 270 280 290
pF1KB9 FLVRFFACPSKAGFFTNIMNIIDIVAIIPYFITLGTELAEKPEDAQQGQQAMSLAILRVI
..:::::::::. :: ::::.::::::::::::::::.::. : :.:.:: ::::::::
CCDS85 LVVRFFACPSKTDFFKNIMNFIDIVAIIPYFITLGTEIAEQ-EGNQKGEQATSLAILRVI
240 250 260 270 280 290
300 310 320 330 340 350
pF1KB9 RLVRVFRIFKLSRHSKGLQILGQTLKASMRELGLLIFFLFIGVILFSSAVYFAEADERES
:::::::::::::::::::::::::::::::::::::::::::::::::::::::.: ::
CCDS85 RLVRVFRIFKLSRHSKGLQILGQTLKASMRELGLLIFFLFIGVILFSSAVYFAEAEEAES
300 310 320 330 340 350
360 370 380 390 400 410
pF1KB9 QFPSIPDAFWWAVVSMTTVGYGDMVPTTIGGKIVGSLCAIAGVLTIALPVPVIVSNFNYF
.: ::::::::::::::::::::: :.:::::::::::::::::::::::::::::::::
CCDS85 HFSSIPDAFWWAVVSMTTVGYGDMYPVTIGGKIVGSLCAIAGVLTIALPVPVIVSNFNYF
360 370 380 390 400 410
420 430 440 450 460 470
pF1KB9 YHRETEGEEQAQYLQVTSCPKIPSSPDLKKSRSASTISKSDYMEIQEGVNNSNEDFREEN
:::::::::::: :.:.: :.. :. ::.. ::.::.:::.::::.: .::: .:. :
CCDS85 YHRETEGEEQAQLLHVSS-PNLASDSDLSR-RSSSTMSKSEYMEIEEDMNNSIAHYRQVN
420 430 440 450 460 470
480 490
pF1KB9 LKTANCTLANTNYVNITKMLTDV
..::::: :: : :: .:.::::
CCDS85 IRTANCTTANQNCVNKSKLLTDV
480 490
>>CCDS828.2 KCNA3 gene_id:3738|Hs108|chr1 (575 aa)
initn: 2293 init1: 984 opt: 2392 Z-score: 2733.6 bits: 515.5 E(32554): 6.1e-146
Smith-Waterman score: 2392; 74.7% identity (85.6% similar) in 514 aa overlap (3-499:66-575)
10 20
pF1KB9 MTVATGDPADEAAALPGHPQDTYDP-------
:: : : .. : : :.:
CCDS82 VNHGYAEPAAGRELPPDMTVVPGDHLLEPEVADGGGAPPQGGCGGGGCDRYEPLPPSLPA
40 50 60 70 80 90
30 40 50 60 70 80
pF1KB9 EADHECC-ERVVINISGLRFETQLKTLAQFPETLLGDPKKRMRYFDPLRNEYFFDRNRPS
....:: ::::::::::::::::::: :::::::::::.::::::::::::::::::::
CCDS82 AGEQDCCGERVVINISGLRFETQLKTLCQFPETLLGDPKRRMRYFDPLRNEYFFDRNRPS
100 110 120 130 140 150
90 100 110 120 130 140
pF1KB9 FDAILYYYQSGGRLRRPVNVPLDIFSEEIRFYELGEEAMEMFREDEGYIKEEERPLPENE
:::::::::::::.:::::::.::::::::::.::::::: ::::::...:::::::. .
CCDS82 FDAILYYYQSGGRIRRPVNVPIDIFSEEIRFYQLGEEAMEKFREDEGFLREEERPLPRRD
160 170 180 190 200 210
150 160 170 180 190 200
pF1KB9 FQRQVWLLFEYPESSGPARIIAIVSVMVILISIVSFCLETLPIFRDENE-DMHGSGVTFH
::::::::::::::::::: ::::::.::::::: ::::::: ::::.. : .:.
CCDS82 FQRQVWLLFEYPESSGPARGIAIVSVLVILISIVIFCLETLPEFRDEKDYPASTSQDSFE
220 230 240 250 260 270
210 220 230 240 250 260
pF1KB9 TYSNSTIGYQQ-STSFTDPFFIVETLCIIWFSFEFLVRFFACPSKAGFFTNIMNIIDIVA
. .::: : . ..::.::::.::::::::::::.::::::::::: : ::::.:::::
CCDS82 AAGNSTSGSRAGASSFSDPFFVVETLCIIWFSFELLVRFFACPSKATFSRNIMNLIDIVA
280 290 300 310 320 330
270 280 290 300 310 320
pF1KB9 IIPYFITLGTELAEKPEDAQQGQQAMSLAILRVIRLVRVFRIFKLSRHSKGLQILGQTLK
::::::::::::::. . :::::::::::::::::::::::::::::::::::::::
CCDS82 IIPYFITLGTELAERQGN---GQQAMSLAILRVIRLVRVFRIFKLSRHSKGLQILGQTLK
340 350 360 370 380 390
330 340 350 360 370 380
pF1KB9 ASMRELGLLIFFLFIGVILFSSAVYFAEADERESQFPSIPDAFWWAVVSMTTVGYGDMVP
::::::::::::::::::::::::::::::. : : :::::::::::.::::::::: :
CCDS82 ASMRELGLLIFFLFIGVILFSSAVYFAEADDPTSGFSSIPDAFWWAVVTMTTVGYGDMHP
400 410 420 430 440 450
390 400 410 420 430 440
pF1KB9 TTIGGKIVGSLCAIAGVLTIALPVPVIVSNFNYFYHRETEGEEQAQYLQVTSCPKIPSSP
.:::::::::::::::::::::::::::::::::::::::::::.::..: :: .. ::
CCDS82 VTIGGKIVGSLCAIAGVLTIALPVPVIVSNFNYFYHRETEGEEQSQYMHVGSCQHLSSSA
460 470 480 490 500 510
450 460 470 480 490
pF1KB9 D-LKKSRSASTISKSDYMEIQEG-VNNS---NEDFREENLKTANCTLANT--NYVNITKM
. :.:.:: ::.:::.:: :.:: .:.: . :. : .::.:: :. . ::: :.
CCDS82 EELRKARSNSTLSKSEYMVIEEGGMNHSAFPQTPFKTGN-STATCTTNNNPNSCVNIKKI
520 530 540 550 560 570
pF1KB9 LTDV
.:::
CCDS82 FTDV
>>CCDS41629.1 KCNA4 gene_id:3739|Hs108|chr11 (653 aa)
initn: 1877 init1: 872 opt: 2188 Z-score: 2499.8 bits: 472.4 E(32554): 6.4e-133
Smith-Waterman score: 2200; 71.7% identity (85.3% similar) in 477 aa overlap (7-468:146-621)
10 20 30
pF1KB9 MTVATGDPADEAAALPGHPQDT----YDPEADHECC
: .:: . ::: :. .::
CCDS41 KILRELSEEEEDEEEEEEEEEEGRFYYSEDDHGDECSYTDLLPQDEGGGGYSSVRYSDCC
120 130 140 150 160 170
40 50 60 70 80 90
pF1KB9 ERVVINISGLRFETQLKTLAQFPETLLGDPKKRMRYFDPLRNEYFFDRNRPSFDAILYYY
::::::.::::::::.::::::::::::::.:: .:::::::::::::::::::::::::
CCDS41 ERVVINVSGLRFETQMKTLAQFPETLLGDPEKRTQYFDPLRNEYFFDRNRPSFDAILYYY
180 190 200 210 220 230
100 110 120 130 140 150
pF1KB9 QSGGRLRRPVNVPLDIFSEEIRFYELGEEAMEMFREDEGYIKEEE-RPLPENEFQRQVWL
::::::.::::::.:::.::..::.:::::. ::::::...::: : ::::::..:.::
CCDS41 QSGGRLKRPVNVPFDIFTEEVKFYQLGEEALLKFREDEGFVREEEDRALPENEFKKQIWL
240 250 260 270 280 290
160 170 180 190 200
pF1KB9 LFEYPESSGPARIIAIVSVMVILISIVSFCLETLPIFRDENE-----DMHGSGVTFHTYS
::::::::.::: ::::::.::::::: ::::::: :::. . . : : .. :
CCDS41 LFEYPESSSPARGIAIVSVLVILISIVIFCLETLPEFRDDRDLVMALSAGGHGGLLNDTS
300 310 320 330 340 350
210 220 230 240 250 260
pF1KB9 NSTIGYQQSTSFTDPFFIVETLCIIWFSFEFLVRFFACPSKAGFFTNIMNIIDIVAIIPY
. . : :.::::::::.::.::::::.:: :::::.: :: :::::::::.:.::
CCDS41 APHLENSGHTIFNDPFFIVETVCIVWFSFEFVVRCFACPSQALFFKNIMNIIDIVSILPY
360 370 380 390 400 410
270 280 290 300 310 320
pF1KB9 FITLGTELAEKPEDAQ-QGQQAMSLAILRVIRLVRVFRIFKLSRHSKGLQILGQTLKASM
::::::.::.. .. : :::::.::::.:::::::::::::::::::::::.::.:::
CCDS41 FITLGTDLAQQQGGGNGQQQQAMSFAILRIIRLVRVFRIFKLSRHSKGLQILGHTLRASM
420 430 440 450 460 470
330 340 350 360 370 380
pF1KB9 RELGLLIFFLFIGVILFSSAVYFAEADERESQFPSIPDAFWWAVVSMTTVGYGDMVPTTI
:::::::::::::::::::::::::::: ..: :::::::::::.::::::::: : :.
CCDS41 RELGLLIFFLFIGVILFSSAVYFAEADEPTTHFQSIPDAFWWAVVTMTTVGYGDMKPITV
480 490 500 510 520 530
390 400 410 420 430 440
pF1KB9 GGKIVGSLCAIAGVLTIALPVPVIVSNFNYFYHRETEGEEQAQYLQ-VTSCPKIPSSPDL
:::::::::::::::::::::::::::::::::::::.:::.: : ..::: .::. :
CCDS41 GGKIVGSLCAIAGVLTIALPVPVIVSNFNYFYHRETENEEQTQLTQNAVSCPYLPSNL-L
540 550 560 570 580 590
450 460 470 480 490
pF1KB9 KKSRSASTIS---KSDYMEIQEGVNNSNEDFREENLKTANCTLANTNYVNITKMLTDV
:: ::... : ::.:.:..:::..:
CCDS41 KKFRSSTSSSLGDKSEYLEMEEGVKESLCAKEEKCQGKGDDSETDKNNCSNAKAVETDV
600 610 620 630 640 650
>>CCDS55625.1 KCNA2 gene_id:3737|Hs108|chr1 (356 aa)
initn: 2005 init1: 2005 opt: 2014 Z-score: 2304.8 bits: 435.5 E(32554): 4.6e-122
Smith-Waterman score: 2014; 94.7% identity (97.2% similar) in 320 aa overlap (1-320:1-318)
10 20 30 40 50 60
pF1KB9 MTVATGDPADEAAALPGHPQDTYDPEADHECCERVVINISGLRFETQLKTLAQFPETLLG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 MTVATGDPADEAAALPGHPQDTYDPEADHECCERVVINISGLRFETQLKTLAQFPETLLG
10 20 30 40 50 60
70 80 90 100 110 120
pF1KB9 DPKKRMRYFDPLRNEYFFDRNRPSFDAILYYYQSGGRLRRPVNVPLDIFSEEIRFYELGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 DPKKRMRYFDPLRNEYFFDRNRPSFDAILYYYQSGGRLRRPVNVPLDIFSEEIRFYELGE
70 80 90 100 110 120
130 140 150 160 170 180
pF1KB9 EAMEMFREDEGYIKEEERPLPENEFQRQVWLLFEYPESSGPARIIAIVSVMVILISIVSF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 EAMEMFREDEGYIKEEERPLPENEFQRQVWLLFEYPESSGPARIIAIVSVMVILISIVSF
130 140 150 160 170 180
190 200 210 220 230 240
pF1KB9 CLETLPIFRDENEDMHGSGVTFHTYSNSTIGYQQSTSFTDPFFIVETLCIIWFSFEFLVR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS55 CLETLPIFRDENEDMHGSGVTFHTYSNSTIGYQQSTSFTDPFFIVETLCIIWFSFEFLVR
190 200 210 220 230 240
250 260 270 280 290 300
pF1KB9 FFACPSKAGFFTNIMNIIDIVAIIPYFITLGTELAEKPEDAQQGQQAMSLAILRVIRLVR
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::: :
CCDS55 FFACPSKAGFFTNIMNIIDIVAIIPYFITLGTELAEKPEDAQQGQQAMSLAILRVIRLER
250 260 270 280 290 300
310 320 330 340 350 360
pF1KB9 VFRIFKLSRHSKGLQILGQTLKASMRELGLLIFFLFIGVILFSSAVYFAEADERESQFPS
: .. .. ..: : :. .
CCDS55 --RPLQSQKSKRGRQHLNTSHDCTLGINLVAGMTVQWTRASGPDDRQTPAVTTLHRMY
310 320 330 340 350
>>CCDS826.1 KCNA10 gene_id:3744|Hs108|chr1 (511 aa)
initn: 1943 init1: 835 opt: 1940 Z-score: 2218.1 bits: 420.0 E(32554): 3.1e-117
Smith-Waterman score: 1940; 66.7% identity (83.1% similar) in 450 aa overlap (15-456:66-509)
10 20 30 40
pF1KB9 MTVATGDPADEAAALPGHPQDTYDPE--ADHECCERVVINISGL
::: : :: . .: .::.:::.::
CCDS82 SPKGRPGGSSFSNGKILISESTNHETAFSKLPGDYADPPGPEPVVLNEGNQRVIINIAGL
40 50 60 70 80 90
50 60 70 80 90 100
pF1KB9 RFETQLKTLAQFPETLLGDPKKRMRYFDPLRNEYFFDRNRPSFDAILYYYQSGGRLRRPV
::::::.::.::::::::: .:::..:: .::::::::::::::.:::::::::..:::.
CCDS82 RFETQLRTLSQFPETLLGDREKRMQFFDSMRNEYFFDRNRPSFDGILYYYQSGGKIRRPA
100 110 120 130 140 150
110 120 130 140 150 160
pF1KB9 NVPLDIFSEEIRFYELGEEAMEMFREDEGYIKEEERPLPENEFQRQVWLLFEYPESSGPA
:::.:::..:: ::::: :::..::::::.::. : :: :...:: ::::::::::. :
CCDS82 NVPIDIFADEISFYELGSEAMDQFREDEGFIKDPETLLPTNDIHRQFWLLFEYPESSSAA
160 170 180 190 200 210
170 180 190 200 210 220
pF1KB9 RIIAIVSVMVILISIVSFCLETLPIFRDENEDMHGSGVTFHTYSNSTIGYQQSTSFTDPF
: .:.:::.:..:::. ::::::: ::.. : :. : . ..: :::::
CCDS82 RAVAVVSVLVVVISITIFCLETLPEFREDRE----LKVVRDPNLNMSKTVLSQTMFTDPF
220 230 240 250 260 270
230 240 250 260 270 280
pF1KB9 FIVETLCIIWFSFEFLVRFFACPSKAGFFTNIMNIIDIVAIIPYFITLGTELAEKPEDAQ
:.::. ::.::.::...:: .::::. :: ::::::::..::::: :: :::... : .
CCDS82 FMVESTCIVWFTFELVLRFVVCPSKTDFFRNIMNIIDIISIIPYFATLITELVQETEPS-
280 290 300 310 320 330
290 300 310 320 330 340
pF1KB9 QGQQAMSLAILRVIRLVRVFRIFKLSRHSKGLQILGQTLKASMRELGLLIFFLFIGVILF
.:: :::::::.:::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 -AQQNMSLAILRIIRLVRVFRIFKLSRHSKGLQILGQTLKASMRELGLLIFFLFIGVILF
340 350 360 370 380
350 360 370 380 390 400
pF1KB9 SSAVYFAEADERESQFPSIPDAFWWAVVSMTTVGYGDMVPTTIGGKIVGSLCAIAGVLTI
::::::::.:: ::.: ::::.::::::.::::::::: ::: ::::::.::::::::::
CCDS82 SSAVYFAEVDEPESHFSSIPDGFWWAVVTMTTVGYGDMCPTTPGGKIVGTLCAIAGVLTI
390 400 410 420 430 440
410 420 430 440 450
pF1KB9 ALPVPVIVSNFNYFYHRETEGEEQA------QYLQVTSCPKIPSSPDLKKSRSASTISKS
::::::::::::::::::::.::. . . . .. :. .:.:. .. . ::
CCDS82 ALPVPVIVSNFNYFYHRETENEEKQNIPGEIERILNSVGSRMGSTDSLNKTNGGCSTEKS
450 460 470 480 490 500
460 470 480 490
pF1KB9 DYMEIQEGVNNSNEDFREENLKTANCTLANTNYVNITKMLTDV
CCDS82 RK
510
>>CCDS12755.1 KCNA7 gene_id:3743|Hs108|chr19 (456 aa)
initn: 1928 init1: 839 opt: 1884 Z-score: 2154.8 bits: 408.1 E(32554): 1.1e-113
Smith-Waterman score: 1884; 68.0% identity (83.8% similar) in 419 aa overlap (31-439:11-423)
10 20 30 40 50 60
pF1KB9 MTVATGDPADEAAALPGHPQDTYDPEADHECCERVVINISGLRFETQLKTLAQFPETLLG
::::.:.:..::::::. .::..::.::::
CCDS12 MEPRCPPPCGCCERLVLNVAGLRFETRARTLGRFPDTLLG
10 20 30 40
70 80 90 100 110 120
pF1KB9 DPKKRMRYFDPLRNEYFFDRNRPSFDAILYYYQSGGRLRRPVNVPLDIFSEEIRFYELGE
:: .: :..: : ::::::.::::::.:::::::::::::..::::.: ::. :: ::
CCDS12 DPARRGRFYDDARREYFFDRHRPSFDAVLYYYQSGGRLRRPAHVPLDVFLEEVAFYGLGA
50 60 70 80 90 100
130 140 150 160 170 180
pF1KB9 EAMEMFREDEGYIKEEERPLPENEFQRQVWLLFEYPESSGPARIIAIVSVMVILISIVSF
:. .::::: :::::. : ::.:::::.:::: ::..:.:::.:::.::: :
CCDS12 AALARLREDEGCPVPPERPLPRRAFARQLWLLFEFPESSQAARVLAVVSVLVILVSIVVF
110 120 130 140 150 160
190 200 210 220 230
pF1KB9 CLETLPIFRDENEDMHGSGVT-------FHTYSNSTI---GYQQSTSFTDPFFIVETLCI
:::::: ::: : :.:.. : . :.. : :.::::.::::::
CCDS12 CLETLPDFRD---DRDGTGLAAAAAAGPFPAPLNGSSQMPGNPPRLPFNDPFFVVETLCI
170 180 190 200 210
240 250 260 270 280 290
pF1KB9 IWFSFEFLVRFFACPSKAGFFTNIMNIIDIVAIIPYFITLGTELAEKPEDAQQGQQAMSL
:::::.:::...::::: :: :.::.::.:::.:::..::::::.. :::::::
CCDS12 CWFSFELLVRLLVCPSKAIFFKNVMNLIDFVAILPYFVALGTELARQ---RGVGQQAMSL
220 230 240 250 260 270
300 310 320 330 340 350
pF1KB9 AILRVIRLVRVFRIFKLSRHSKGLQILGQTLKASMRELGLLIFFLFIGVILFSSAVYFAE
:::::::::::::::::::::::::::::::.:::::::::::::::::.::::::::::
CCDS12 AILRVIRLVRVFRIFKLSRHSKGLQILGQTLRASMRELGLLIFFLFIGVVLFSSAVYFAE
280 290 300 310 320 330
360 370 380 390 400 410
pF1KB9 ADERESQFPSIPDAFWWAVVSMTTVGYGDMVPTTIGGKIVGSLCAIAGVLTIALPVPVIV
.:. .:.: :::..::::::.:::::::::.:.:.:::::::::::::::::.:::::::
CCDS12 VDRVDSHFTSIPESFWWAVVTMTTVGYGDMAPVTVGGKIVGSLCAIAGVLTISLPVPVIV
340 350 360 370 380 390
420 430 440 450 460 470
pF1KB9 SNFNYFYHRETEGEEQAQYLQVTSCPKIPSSPDLKKSRSASTISKSDYMEIQEGVNNSNE
:::.::::::::::: ... .: : :
CCDS12 SNFSYFYHRETEGEEAGMFSHVDMQPCGPLEGKANGGLVDGEVPELPPPLWAPPGKHLVT
400 410 420 430 440 450
>>CCDS8534.1 KCNA6 gene_id:3742|Hs108|chr12 (529 aa)
initn: 1794 init1: 891 opt: 1236 Z-score: 1413.8 bits: 271.2 E(32554): 2e-72
Smith-Waterman score: 2087; 69.5% identity (80.6% similar) in 489 aa overlap (17-460:20-503)
10 20 30 40 50
pF1KB9 MTVATGDPADEAAALPGHPQDTYD-PEADHE--CC--ERVVINISGLRFETQLKTLA
:. ::. : ::: :: ::.:::::::::::::.::.
CCDS85 MRSEKSLTLAAPGEVRGPEGEQQDAGDFPEAGGGGGCCSSERLVINISGLRFETQLRTLS
10 20 30 40 50 60
60 70 80 90 100 110
pF1KB9 QFPETLLGDPKKRMRYFDPLRNEYFFDRNRPSFDAILYYYQSGGRLRRPVNVPLDIFSEE
::.:::::: .:.:.::::::::::::::::::::::::::::::::::::::::: ::
CCDS85 LFPDTLLGDPGRRVRFFDPLRNEYFFDRNRPSFDAILYYYQSGGRLRRPVNVPLDIFLEE
70 80 90 100 110 120
120 130 140 150 160
pF1KB9 IRFYELGEEAMEMFREDEGYIKE---EERPLPENEFQRQVWLLFEYPESSGPARIIAIVS
::::.::.::. :::::: . : .:.::: . ::::::::::::::::::: :::::
CCDS85 IRFYQLGDEALAAFREDEGCLPEGGEDEKPLPSQPFQRQVWLLFEYPESSGPARGIAIVS
130 140 150 160 170 180
170 180 190 200
pF1KB9 VMVILISIVSFCLETLPIFR----------------------DENEDMHGSGVTFHTYSN
:.::::::: ::::::: :: .:.:: : . : .
CCDS85 VLVILISIVIFCLETLPQFRVDGRGGNNGGVSRVSPVSRGSQEEEEDEDDSYTFHHGITP
190 200 210 220 230 240
210 220 230 240 250
pF1KB9 STIGYQQSTS--------FTDPFFIVETLCIIWFSFEFLVRFFACPSKAGFFTNIMNIID
. .: :.: ::::::.::::::.::.::.:::: ::::: .:: :::::::
CCDS85 GEMGTGGSSSLSTLGGSFFTDPFFLVETLCIVWFTFELLVRFSACPSKPAFFRNIMNIID
250 260 270 280 290 300
260 270 280 290 300 310
pF1KB9 IVAIIPYFITLGTELAEKPED-------AQQGQQAMSLAILRVIRLVRVFRIFKLSRHSK
.:::.::::::::::... :. .:.:::::::::::::::::::::::::::::
CCDS85 LVAIFPYFITLGTELVQQQEQQPASGGGGQNGQQAMSLAILRVIRLVRVFRIFKLSRHSK
310 320 330 340 350 360
320 330 340 350 360 370
pF1KB9 GLQILGQTLKASMRELGLLIFFLFIGVILFSSAVYFAEADERESQFPSIPDAFWWAVVSM
::::::.::.::::::::::::::::::::::::::::::. .: :::::::::::::.:
CCDS85 GLQILGKTLQASMRELGLLIFFLFIGVILFSSAVYFAEADDDDSLFPSIPDAFWWAVVTM
370 380 390 400 410 420
380 390 400 410 420 430
pF1KB9 TTVGYGDMVPTTIGGKIVGSLCAIAGVLTIALPVPVIVSNFNYFYHRETEGEEQAQYLQV
:::::::: : :.::::::::::::::::::::::::::::::::::::: :::.:: .:
CCDS85 TTVGYGDMYPMTVGGKIVGSLCAIAGVLTIALPVPVIVSNFNYFYHRETEQEEQGQYTHV
430 440 450 460 470 480
440 450 460 470 480 490
pF1KB9 TSCPKIPSSPDLKKSRSASTISKSDYMEIQEGVNNSNEDFREENLKTANCTLANTNYVNI
: : . :. :::. . .. ..: :. :
CCDS85 T-CGQ-PA-PDLRATDNG--LGKPDFPEANRERRPSYLPTPHRAYAEKRMLTEV
490 500 510 520
>>CCDS8536.1 KCNA5 gene_id:3741|Hs108|chr12 (613 aa)
initn: 2085 init1: 932 opt: 932 Z-score: 1065.7 bits: 207.0 E(32554): 4.9e-53
Smith-Waterman score: 2072; 77.3% identity (87.5% similar) in 415 aa overlap (33-427:120-533)
10 20 30 40 50 60
pF1KB9 VATGDPADEAAALPGHPQDTYDPEADHECCERVVINISGLRFETQLKTLAQFPETLLGDP
.:: :::::::::::: ::::::.::::::
CCDS85 RPPPEDEEEEGDPGLGTVEDQALGTASLHHQRVHINISGLRFETQLGTLAQFPNTLLGDP
90 100 110 120 130 140
70 80 90 100 110 120
pF1KB9 KKRMRYFDPLRNEYFFDRNRPSFDAILYYYQSGGRLRRPVNVPLDIFSEEIRFYELGEEA
::.::::::::::::::::::::.::::::::::::::::: ::.:..:::::.::.::
CCDS85 AKRLRYFDPLRNEYFFDRNRPSFDGILYYYQSGGRLRRPVNVSLDVFADEIRFYQLGDEA
150 160 170 180 190 200
130 140 150 160 170 180
pF1KB9 MEMFREDEGYIKEEERPLPENEFQRQVWLLFEYPESSGPARIIAIVSVMVILISIVSFCL
:: ::::::.:::::.:::.:::::::::.:::::::: :: ::::::.::::::..:::
CCDS85 MERFREDEGFIKEEEKPLPRNEFQRQVWLIFEYPESSGSARAIAIVSVLVILISIITFCL
210 220 230 240 250 260
190 200 210 220
pF1KB9 ETLPIFRDENEDM----------------HGSGVTFHTYSNSTIGYQQSTSFTDPFFIVE
:::: :::: : . .:::: . :. :.. ...:::::::
CCDS85 ETLPEFRDERELLRHPPAPHQPPAPAPGANGSGV-MAPPSGPTVAPLLPRTLADPFFIVE
270 280 290 300 310 320
230 240 250 260 270 280
pF1KB9 TLCIIWFSFEFLVRFFACPSKAGFFTNIMNIIDIVAIIPYFITLGTELAEKPEDA----Q
: :.:::.::.::::::::::::: :::::::.:::.::::::::::::. . :
CCDS85 TTCVIWFTFELLVRFFACPSKAGFSRNIMNIIDVVAIFPYFITLGTELAEQQPGGGGGGQ
330 340 350 360 370 380
290 300 310 320 330 340
pF1KB9 QGQQAMSLAILRVIRLVRVFRIFKLSRHSKGLQILGQTLKASMRELGLLIFFLFIGVILF
.:::::::::::::::::::::::::::::::::::.::.::::::::::::::::::::
CCDS85 NGQQAMSLAILRVIRLVRVFRIFKLSRHSKGLQILGKTLQASMRELGLLIFFLFIGVILF
390 400 410 420 430 440
350 360 370 380 390 400
pF1KB9 SSAVYFAEADERESQFPSIPDAFWWAVVSMTTVGYGDMVPTTIGGKIVGSLCAIAGVLTI
::::::::::.. ..: :::::::::::.::::::::: : :.:::::::::::::::::
CCDS85 SSAVYFAEADNQGTHFSSIPDAFWWAVVTMTTVGYGDMRPITVGGKIVGSLCAIAGVLTI
450 460 470 480 490 500
410 420 430 440 450 460
pF1KB9 ALPVPVIVSNFNYFYHRETEGEEQAQYLQVTSCPKIPSSPDLKKSRSASTISKSDYMEIQ
:::::::::::::::::::. :: :
CCDS85 ALPVPVIVSNFNYFYHRETDHEEPAVLKEEQGTQSQGPGLDRGVQRKVSGSRGSFCKAGG
510 520 530 540 550 560
>>CCDS13418.1 KCNB1 gene_id:3745|Hs108|chr20 (858 aa)
initn: 872 init1: 520 opt: 824 Z-score: 940.3 bits: 184.3 E(32554): 4.7e-46
Smith-Waterman score: 934; 35.7% identity (65.1% similar) in 501 aa overlap (13-481:14-486)
10 20 30 40 50
pF1KB9 MTVATGDPADEAAALPGHPQDTYDPEADHECCERVVINISGLRFETQLKTLAQFPETLL
..:: .:.. .: : .:: .:..:: :. .:: ..:.: :
CCDS13 MPAGMTKHGSRSTSSLPPEPMEIVRSKA---CSRRVRLNVGGLAHEVLWRTLDRLPRTRL
10 20 30 40 50
60 70 80 90 100 110
pF1KB9 GDPK------KRMRYFDPLR---NEYFFDRNRPSFDAILYYYQSGGRLRRPVNVPLDIFS
: . . .. : :::::::. .: .:: .:..: ::. .. ::
CCDS13 GKLRDCNTHDSLLEVCDDYSLDDNEYFFDRHPGAFTSILNFYRTG-RLHMMEEMCALSFS
60 70 80 90 100 110
120 130 140 150
pF1KB9 EEI----------------RFYELGEEAMEMFREDEGYIKEEERPLPEN----EFQRQVW
.:. :... :. : .... ..:.: .: : ....:
CCDS13 QELDYWGIDEIYLESCCQARYHQKKEQMNEELKREAETLREREGEEFDNTCCAEKRKKLW
120 130 140 150 160 170
160 170 180 190 200 210
pF1KB9 LLFEYPESSGPARIIAIVSVMVILISIVSFCLETLPIFRDENEDMHGSGVTFHTYSNSTI
:.: :.:: :.:.::.:.: :..: ... :.::: ... .:
CCDS13 DLLEKPNSSVAAKILAIISIMFIVLSTIALSLNTLPELQSLDE-----------------
180 190 200 210
220 230 240 250 260
pF1KB9 GYQQSTSFTDPFFI-VETLCIIWFSFEFLVRFFACPSKAGFFTNIMNIIDIVAIIPYFIT
. :::. .: . ::..:: ::..:.:.::.. :.: :: . .: ::..::.::..:
CCDS13 -FGQSTD--NPQLAHVEAVCIAWFTMEYLLRFLSSPKKWKFFKGPLNAIDLLAILPYYVT
220 230 240 250 260 270
270 280 290 300 310 320
pF1KB9 LGTELAEKPEDAQQGQQAMSLAILRVIRLVRVFRIFKLSRHSKGLQILGQTLKASMRELG
. :.:. ... : :.. .....:..:..::.::.::: ::: :: ::. :. :::
CCDS13 I--FLTESNKSVLQFQNVRR--VVQIFRIMRILRILKLARHSTGLQSLGFTLRRSYNELG
280 290 300 310 320 330
330 340 350 360 370 380
pF1KB9 LLIFFLFIGVILFSSAVYFAEADERESQFPSIPDAFWWAVVSMTTVGYGDMVPTTIGGKI
:::.:: .:...::: :.::: :: ...: ::: .::::...::::::::. : :. :::
CCDS13 LLILFLAMGIMIFSSLVFFAEKDEDDTKFKSIPASFWWATITMTTVGYGDIYPKTLLGKI
340 350 360 370 380 390
390 400 410 420 430 440
pF1KB9 VGSLCAIAGVLTIALPVPVIVSNFNYFYHRETEGEEQAQYLQVTSCPKIPSSP-DLK-KS
::.:: :::::.::::.:.::.::. ::... . :. . .. : .: ... :.
CCDS13 VGGLCCIAGVLVIALPIPIIVNNFSEFYKEQKRQEKAIKRREALERAKRNGSIVSMNMKD
400 410 420 430 440 450
450 460 470 480 490
pF1KB9 RSASTISKSDYMEIQEGVNNSNEDFREENLKTANCTLANTNYVNITKMLTDV
: .: : . ..: : ...: ..: . :
CCDS13 AFARSIEMMDIVVEKNGENMGKKDKVQDNHLSPNKWKWTKRTLSETSSSKSFETKEQGSP
460 470 480 490 500 510
CCDS13 EKARSSSSPQHLNVQQLEDMYNKMAKTQSQPILNTKESAAQSKPKEELEMESIPSPVAPL
520 530 540 550 560 570
499 residues in 1 query sequences
18511270 residues in 32554 library sequences
Tcomplib [36.3.4 Apr, 2011] (8 proc)
start: Fri Nov 4 19:55:56 2016 done: Fri Nov 4 19:55:57 2016
Total Scan time: 3.110 Total Display time: 0.100
Function used was FASTA [36.3.4 Apr, 2011]