GENSCAN 1.0	Date run:  4-Nov-116	Time: 19:55:43

Sequence gi568815586f:4811379_5012863 : 201485 bp : 44.43% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   3347   3405   59  1  2   62   92    19 0.166   0.50
 1.02 Intr +   8288   8411  124  2  1   84    2    97 0.013   1.29
 1.03 Intr +  19762  19911  150  0  0   59   -8   141 0.068   1.96
 1.04 Term +  27919  27987   69  0  0  115   36    97 0.245   5.14
 1.05 PlyA +  29943  29948    6                               1.05

 2.06 PlyA -  32122  32117    6                               1.05
 2.05 Term -  34153  34021  133  0  1   90   38    95 0.222   2.26
 2.04 Intr -  36584  36460  125  2  2   88   66    36 0.144   0.78
 2.03 Intr -  44757  44497  261  0  0   64   60   106 0.586   3.08
 2.02 Intr -  45026  44921  106  1  1   50   96    29 0.677   0.12
 2.01 Init -  45511  45414   98  1  2   65  121    71 0.528   7.88
 2.00 Prom -  52397  52358   40                              -3.86

 3.06 PlyA -  53846  53841    6                               1.05
 3.05 Term -  64840  64829   12  1  0  121   39    12 0.334  -2.20
 3.04 Intr -  68251  68151  101  2  2   58   95    74 0.309   4.93
 3.03 Intr -  69283  69147  137  0  2   74  103    -2 0.609   0.11
 3.02 Intr -  70446  70309  138  2  0   64   94    98 0.920   7.58
 3.01 Init -  80297  80236   62  2  2   66  103    -5 0.136  -0.48
 3.00 Prom -  82086  82047   40                              -5.76

 4.00 Prom +  82161  82200   40                              -5.16
 4.01 Sngl + 100001 101488 1488  1  0  104   42  2681 0.989 260.59
 4.02 PlyA + 101689 101694    6                               1.05

 5.03 PlyA - 101710 101705    6                               1.05
 5.02 Term - 121271 120823  449  0  2   -3   48   368 0.338  19.08
 5.01 Init - 141885 141753  133  0  1   98   45    60 0.222   3.00
 5.00 Prom - 146079 146040   40                              -4.16

 6.00 Prom + 161107 161146   40                              -3.26
 6.01 Init + 165724 166034  311  0  2   61   66   151 0.407   7.25
 6.02 Intr + 167766 167880  115  0  1   98   69    41 0.519   3.65
 6.03 Term + 171318 171371   54  2  0   78   43    90 0.527   1.06
 6.04 PlyA + 172058 172063    6                               1.05

 7.04 PlyA - 172901 172896    6                               1.05
 7.03 Term - 173657 173539  119  0  2  132   55    77 0.939   7.50
 7.02 Intr - 177361 177211  151  1  1   75   80    81 0.480   5.74
 7.01 Init - 190304 190218   87  2  0   99   72    31 0.093   3.25

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815586f:4811379_5012863|GENSCAN_predicted_peptide_1|133_aa
MRDIRPQGARRDSSPSLQVSSLPQPLRLLNKGPIPGQGDVAALMVEDSELAGLPAMGVGE
LVRGFARTAEEYGTDELSFLKTEGALVQMHKVVLEVACGPERLAWWIFTVLPTRCEDNED
EDLYDDTLPLNNQ

>gi568815586f:4811379_5012863|GENSCAN_predicted_CDS_1|402_bp
atgcgggatattcgtccccaaggagcgaggagggacagctcgccttctttgcaggtgagc
tcactgccacagccactacggcttcttaacaaaggtcctatcccagggcaaggtgacgtg
gctgccctcatggttgaggattctgagcttgctggcttgcctgccatgggagttggagaa
ttggtgagaggatttgcaaggactgcggaggaatatgggaccgacgagctctcctttctc
aaaacagagggagccttggtgcagatgcacaaagtggtccttgaagttgcatgtggcccg
gagcggctggcttggtggatctttactgttctgcctactcggtgtgaagacaatgaggat
gaagacctttacgatgatacacttccacttaataaccagtaa

>gi568815586f:4811379_5012863|GENSCAN_predicted_peptide_2|240_aa
MKQYLEIKSSEDSVTSRRGGLTEPPELAPAGTRGGNQGPEWKTDTRGKRVAYKVTFHVSP
PHSGSSDQSTLSQSSQGVQPLRGVSRNTSCCFLYDLFLEVAGTHKQGLSKMSTCFHRPGD
REPLRPQLPYIYLESPSSHLYFCTQYLRRSGAEGQGNIKQAVGEYFPGKTKGFQEKKACR
HWRPPVRQPDPSFITLQNRVPNVQHLHNNARNVTAEHPEREKLNNLQRDRSSRTKQSEKR

>gi568815586f:4811379_5012863|GENSCAN_predicted_CDS_2|723_bp
atgaagcagtacttggaaattaaaagcagtgaggactctgtcaccagcaggcgaggtggc
ctcacagagccccctgagctggcaccggctggcacaagagggggaaaccaaggccctgag
tggaagactgacaccagaggaaaaagggttgcatacaaggtcaccttccatgtctcccct
cctcactccgggtccagtgatcagagcacactgagccaaagttcccagggcgtccagcct
ctgcgtggagtttccaggaacacttcctgctgcttcctctacgacctcttcctggaagtt
gcaggcacccataagcaaggactctctaagatgtccacttgctttcacaggccaggagat
cgggagcctttgaggcctcagctcccctacatctacttggaatccccgagcagccacctt
tacttctgcacccaatacctccggcggagtggggcagaagggcagggtaatatcaaacag
gcagttggagaatattttcctggaaaaaccaaaggattccaagaaaaaaaggcctgtaga
cactggaggcccccagtgagacagcctgatcccagcttcatcactctgcagaaccgtgtg
cctaatgtccaacacctccacaacaatgcacgtaacgtgactgcggagcatccagaaaga
gaaaagcttaacaacctgcagagggacagaagttcacgtacaaagcaatcagaaaagcgt
tga

>gi568815586f:4811379_5012863|GENSCAN_predicted_peptide_3|149_aa
MLQNPTLFEHQHDIINGKFPMHLIPGCGSNKTNRDCLTGPLWSGYFPFRCRQPSEHAASK
SSEITAGAEWSTHLPLSQRALVLLCNKASLTTKHVLKWEFVCASSLFACHYTCAPAVAER
AQCRIQAMASEGASIKPWQPPLGVEPPLY

>gi568815586f:4811379_5012863|GENSCAN_predicted_CDS_3|450_bp
atgctccaaaatccaacactttttgaacaccaacatgatatcataaatggaaaattcccc
atgcacctgattcctggatgtggcagcaataaaaccaaccgagattgtttgactggcccc
ctctggagcgggtatttcccattccgatgccgtcagccatctgagcatgctgcttccaag
agctccgaaataacagccggtgctgaatggagcacacaccttcctctcagccagagagca
cttgtcctcctgtgcaataaagcttcactgacgaccaagcatgttttaaaatgggagttt
gtctgtgcaagctctctctttgcctgccactatacatgtgctccagctgtggctgaaagg
gcccaatgtagaattcaggccatggcttcagagggtgcaagcatcaagccttggcagcct
ccacttggtgttgagcctccactctactag

>gi568815586f:4811379_5012863|GENSCAN_predicted_peptide_4|495_aa
MTVMSGENVDEASAAPGHPQDGSYPRQADHDDHECCERVVINISGLRFETQLKTLAQFPN
TLLGNPKKRMRYFDPLRNEYFFDRNRPSFDAILYYYQSGGRLRRPVNVPLDMFSEEIKFY
ELGEEAMEKFREDEGFIKEEERPLPEKEYQRQVWLLFEYPESSGPARVIAIVSVMVILIS
IVIFCLETLPELKDDKDFTGTVHRIDNTTVIYNSNIFTDPFFIVETLCIIWFSFELVVRF
FACPSKTDFFKNIMNFIDIVAIIPYFITLGTEIAEQEGNQKGEQATSLAILRVIRLVRVF
RIFKLSRHSKGLQILGQTLKASMRELGLLIFFLFIGVILFSSAVYFAEAEEAESHFSSIP
DAFWWAVVSMTTVGYGDMYPVTIGGKIVGSLCAIAGVLTIALPVPVIVSNFNYFYHRETE
GEEQAQLLHVSSPNLASDSDLSRRSSSTMSKSEYMEIEEDMNNSIAHYRQVNIRTANCTT
ANQNCVNKSKLLTDV

>gi568815586f:4811379_5012863|GENSCAN_predicted_CDS_4|1488_bp
atgacggtgatgtctggggagaacgtggacgaggcttcggccgccccgggccacccccag
gatggcagctacccccggcaggccgaccacgacgaccacgagtgctgcgagcgcgtggtg
atcaacatctccgggctgcgcttcgagacgcagctcaagaccctggcgcagttccccaac
acgctgctgggcaaccctaagaaacgcatgcgctacttcgaccccctgaggaacgagtac
ttcttcgaccgcaaccggcccagcttcgacgccatcctctactactaccagtccggcggc
cgcctgcggaggccggtcaacgtgcccctggacatgttctccgaggagatcaagttttac
gagttgggcgaggaggccatggagaagttccgggaggacgagggcttcatcaaggaggag
gagcgccctctgcccgagaaggagtaccagcgccaggtgtggctgctcttcgagtacccc
gagagctcggggcccgccagggtcatcgccatcgtctccgtcatggtcatcctcatctcc
atcgtcatcttttgcctggagacgctccccgagctgaaggatgacaaggacttcacgggc
accgtccaccgcatcgacaacaccacggtcatctacaattccaacatcttcacagacccc
ttcttcatcgtggaaacgctgtgtatcatctggttctccttcgagctggtggtgcgcttc
ttcgcctgccccagcaagacggacttcttcaaaaacatcatgaacttcatagacattgtg
gccatcattccttatttcatcacgctgggcaccgagatagctgagcaggaaggaaaccag
aagggcgagcaggccacctccctggccatcctcagggtcatccgcttggtaagggttttt
agaatcttcaagctctcccgccactctaagggcctccagatcctgggccagaccctcaaa
gctagtatgagagagctagggctgctcatctttttcctcttcatcggggtcatcctgttt
tctagtgcagtgtactttgccgaggcggaagaagctgagtcgcacttctccagtatcccc
gatgctttctggtgggcggtggtgtccatgaccactgtaggatacggtgacatgtaccct
gtgacaattggaggcaagatcgtgggctccttgtgtgccatcgctggtgtgctaacaatt
gccctgcccgtacctgtcattgtgtccaatttcaactatttctaccaccgagaaactgag
ggggaagagcaggctcagttgctccacgtcagttcccctaacttagcctctgacagtgac
ctcagtcgccgcagttcctctactatgagcaagtctgagtacatggagatcgaagaggat
atgaataatagcatagcccattatagacaggtcaatatcagaactgccaattgcaccact
gctaaccaaaactgcgttaataagagcaagctactgaccgatgtttaa

>gi568815586f:4811379_5012863|GENSCAN_predicted_peptide_5|193_aa
MGQRPQKIKPIRKIFSKGNNLSHRTLAGRRDLEEHQERSKDDDIEKKKKKKKKKKKKKKK
KKKKKKKKKKKKKKKKERKNALRPNVNISPSQKFSRHSFQNQDFLFWAPLACSWLPLLLV
FLAYPNVRGHVCLSHCTKLLVELEFRIPEFRMPEFRIPVKYNSSRERTKRMYSSPNVWGS
AYCEPIFKPQENE

>gi568815586f:4811379_5012863|GENSCAN_predicted_CDS_5|582_bp
atggggcagagaccacaaaaaatcaaacccatccggaagatcttttccaagggaaataat
ctcagtcacagaactttggcaggcaggagagatttggaggaacatcaagaaagatctaag
gatgatgatattgagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaag
aagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaaagaaagaaagaat
gctctaaggcccaatgtaaacatttccccctctcagaagttctctagacattcctttcag
aaccaggacttcctcttctgggctcccctagcttgttcttggcttcctctgctcctagtg
ttcttggcttatcccaatgtccgtggtcatgtctgtctgtctcactgcaccaagctcctt
gtggagcttgaatttagaataccagaatttagaatgccagagtttagaataccagtcaaa
tacaattcgtcccgagaacggaccaagagaatgtattcctcacccaacgtttgggggtca
gcttactgtgagcctatttttaagccacaagaaaatgagtga

>gi568815586f:4811379_5012863|GENSCAN_predicted_peptide_6|159_aa
MPFACMPAGVVVPSCSPVLFLSMVLSTGGGPIIQDCGGVEENTREPSEWWHRHLTYLENC
LETGDSLRALLPGPIIAGSQAACRKGEYTTALHGLGEDDFSTSCTGVREEEVEAAVLGSG
FIPCDSSGLPQVLLSTYTTGHQELAYSAIDLTINTLMET

>gi568815586f:4811379_5012863|GENSCAN_predicted_CDS_6|480_bp
atgccatttgcctgcatgcctgctggtgtggtggtgccgtcctgttctcccgtgctgttc
ctcagcatggttctctccacgggtggaggacccatcattcaggattgtggtggcgtagaa
gaaaacacacgggagccttctgagtggtggcaccggcatcttacataccttgaaaactgc
ctggaaacaggtgattcattacgggctctgcttccaggcccgatcatagcaggatcccag
gcagcctgcagaaagggagagtacactactgctcttcatggtctgggggaggatgacttc
agtacctcatgcacaggggtgcgagaggaggaagtggaggctgcagtgctgggctctggg
ttcattccctgtgattcctctgggctgccccaagtcctgctcagcacatacacaacagga
caccaggaacttgcctattctgccattgacctcaccatcaacactttgatggagacctaa

>gi568815586f:4811379_5012863|GENSCAN_predicted_peptide_7|118_aa
MGSSEGRVTEHLQPQSSPFSIAASRARSQLSGGLAELMSGINQQGGKSVSSAAPLPPRNH
LLKLLSSIHLPEAPVMQAAGALLPAIICHCKQPVQQCAAVSTSSERRHLLPEDTFRYA

>gi568815586f:4811379_5012863|GENSCAN_predicted_CDS_7|357_bp
atgggctcctcggagggcagagtcacagagcacctgcagccacagagttctcccttctcc
attgctgcttctcgtgctaggagccagctgagcggaggactggctgagctgatgagtggt
ataaatcaacaaggtggcaaatcggtgagttctgctgctcctttgcccccaaggaaccac
ttgttaaagctcctgagcagcatccacctccctgaagcacctgtcatgcaggctgcgggg
gccttactgcctgccatcatctgccactgcaaacaacctgttcagcagtgtgcagctgtg
agcacatcctctgagagaaggcatctgctacccgaagataccttcaggtatgcctga