GENSCAN 1.0	Date run:  4-Nov-116	Time: 19:55:09

Sequence gi568815591r:20684293_20885762 : 201470 bp : 39.37% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   1404   1544  141  2  0   71   80    69 0.830   4.03
 1.02 Intr +   4961   5123  163  1  1  102   53   127 0.023   9.23
 1.03 Intr +  14227  14258   32  2  2    3  103    13 0.006  -8.77
 1.04 Intr +  15533  15637  105  1  0  101  115    31 0.219   6.59
 1.05 Intr +  20432  20515   84  1  0  109   30    73 0.167   2.70
 1.06 Intr +  38724  38927  204  2  0   32   93   147 0.022   8.07
 1.07 Intr +  42748  42848  101  0  2   38   60   101 0.965   0.29
 1.08 Intr +  44023  44163  141  1  0   62  103    64 0.898   3.85
 1.09 Intr +  54691  54847  157  1  1   49   74   206 0.100  14.39
 1.10 Intr +  58585  58782  198  0  0   90   83   147 0.992  13.03
 1.11 Intr +  60940  61146  207  0  0   71   94   254 0.999  22.65
 1.12 Intr +  69068  69214  147  1  0   48   87   145 0.981   9.91
 1.13 Term +  71135  71332  198  1  0  115   44   111 0.994   5.82
 1.14 PlyA +  72358  72363    6                               1.05

 2.00 Prom +  75752  75791   40                              -7.05
 2.01 Init +  76173  76313  141  2  0   52   83   131 0.929   9.18
 2.02 Intr +  76578  76799  222  2  0  115   72    44 0.815   2.90
 2.03 Term +  81032  81091   60  1  0    4   43   173 0.915   1.23
 2.04 PlyA +  81106  81111    6                               1.05

 3.00 Prom +  92637  92676   40                              -7.05
 3.01 Init +  93954  94163  210  2  0   95   36   150 0.908   7.36
 3.02 Term +  99305  99925  621  1  0   86   45   470 0.998  35.92
 3.03 PlyA +  99934  99939    6                             -10.43

 4.08 PlyA -  99958  99953    6                             -10.44
 4.07 Term - 101503  99998 1506  1  0  156   48  1496 0.902 141.93
 4.06 Intr - 109241 109116  126  2  0   62   36    87 0.524   0.86
 4.05 Intr - 110820 110662  159  0  0   27   45   195 0.429   8.36
 4.04 Intr - 113172 113037  136  2  1   72  -34   194 0.234   5.25
 4.03 Intr - 113768 113693   76  0  1   63   69    84 0.993   1.65
 4.02 Intr - 114896 114716  181  2  1   55   28   190 0.531   8.22
 4.01 Init - 135227 135174   54  2  0   60   76    42 0.347   1.53
 4.00 Prom - 137470 137431   40                              -3.65

 5.00 Prom + 137765 137804   40                              -7.65
 5.01 Init + 142207 142267   61  0  1   59   49    36 0.470  -1.74
 5.02 Intr + 143026 143258  233  2  2  104   83   297 0.564  27.37
 5.03 Term + 143950 144048   99  0  0   95   44    91 0.952   2.55
 5.04 PlyA + 146323 146328    6                               1.05

 6.00 Prom + 153048 153087   40                              -6.95
 6.01 Init + 159422 159671  250  1  1   27   75   238 0.047  14.07
 6.02 Intr + 181621 181698   78  2  0   98   99    27 0.012   3.40
 6.03 Term + 198448 198470   23  2  2  119   53    19 0.017  -1.00
 6.04 PlyA + 199585 199590    6                               1.05

 7.02 PlyA - 200377 200372    6                               1.05
 7.01 Sngl - 200914 200498  417  1  0   60   42   205 0.813   9.15
 7.00 Prom - 201217 201178   40                              -3.65


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term +   4961   5149  189  1  0  102   53   153 0.970   9.67
S.002 Term +  51278  51368   91  2  1   86   40   139 0.872   5.11
S.003 Init +  54719  54847  129  1  0   82   74   169 0.875  15.11
S.004 Sngl + 159422 159691  270  1  0   27   49   258 0.874  10.83
S.005 Init - 182952 182868   85  0  1   57   98    61 0.872   5.03


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815591r:20684293_20885762|GENSCAN_predicted_peptide_1|625_aa
DIKKADEQMESMTYSTERKTNSLPLHSVKSIKSDFIDKAEESTQSKEQGGEAGLNGKGTA
VVHWMAEQLLWYLAGGACWKSALKGGKGDLPQDGAELQNLSVFSIIFAKIITMFGNNDKT
TLKHDAEIYSMIFVILGVICFVSYFMQDIAWFDEKENSTGGLTTILAIDIAQIQGATGSR
IGVLTQNATNMGLSVIISFIYGWEMTFLILSIAPVLAVTGMIETAAMTGFANKDKQELKH
AGKIATEALENIRTIVSLTREKAFEQMYEEMLQTQHRNTSKKAQIIGSCYAFSHAFIYFA
YAAGFRFGAYLIQAGRMTPEGMFIVFTAIAYGAMAIGETLVLAPEYSKAKSGAAHLFALL
EKKPNIDSRSQEGKKPDTCEGNLEFREVSFFYPCRPDVFILRGLSLSIERGKTVAFVGSS
GCGKSTSVQLLQRLYDPVQGQVLFDGVDAKELNVQWLRSQIAIVPQEPVLFNCSIAENIA
YGDNSRVVPLDEIKEAANAANIHSFIEGLPEKYNTQVGLKGAQLSGGQKQRLAIARALLQ
KPKILLLDEATSALDNDSEKVVQHALDKARTGRTCLVVTHRLSAIQNADLIVVLHNGKIK
EQGTHQELLRNRDIYFKLVNAQSVQ

>gi568815591r:20684293_20885762|GENSCAN_predicted_CDS_1|1878_bp
gatattaaaaaagctgatgaacagatggagtcaatgacatattctactgaaagaaagacc
aactcacttcctctgcactctgtgaagagcatcaagtcagacttcattgacaaggctgag
gaatccacccaatctaaagagcaaggcggagaggcaggcctcaatggaaagggcacagct
gtggttcactggatggcagagcagttgctgtggtaccttgctggtggggcttgctggaaa
tctgccctcaagggtggcaagggagaccttccacaggacggtgctgagcttcagaacctg
tcagtattttccatcatctttgcaaaaattataaccatgtttggaaataatgataaaacc
acattaaagcatgatgcagaaatttattccatgatattcgtcattttgggtgttatttgc
tttgtcagttatttcatgcaggatattgcctggtttgatgaaaaggaaaacagcacagga
ggcttgacaacaatattagccatagatatagcacaaattcaaggagcaacaggttccagg
attggcgtcttaacacaaaatgcaactaacatgggactttcagttatcatttcctttata
tatggatgggagatgacattcctgattctgagtattgctccagtacttgccgtgacagga
atgattgaaaccgcagcaatgactggatttgccaacaaagataagcaagaacttaagcat
gctggaaagatagcaactgaagctttggagaatatacgtactatagtgtcattaacaagg
gaaaaagccttcgagcaaatgtatgaagagatgcttcagactcaacacagaaatacctcg
aagaaagcacagattattggaagctgttatgcattcagccatgcctttatatattttgcc
tatgcggcagggtttcgatttggagcctatttaattcaagctggacgaatgaccccagag
ggcatgttcatagtttttactgcaattgcatatggagctatggccatcggagaaacgctc
gttttggctcctgaatattccaaagccaaatcgggggctgcgcatctgtttgccttgttg
gaaaagaaaccaaatatagacagccgcagtcaagaagggaaaaagccagacacatgtgaa
gggaatttagagtttcgagaagtctctttcttctatccatgtcgcccagatgttttcatc
ctccgtggcttatccctcagtattgagcgaggaaagacagtagcatttgtggggagcagc
ggctgtgggaaaagcacttctgttcaacttctgcagagactttatgaccccgtgcaagga
caagtgctgtttgatggtgtggatgcaaaagaattgaatgtacagtggctccgttcccaa
atagcaatcgttcctcaagagcctgtgctcttcaactgcagcattgctgagaacatcgcc
tatggtgacaacagccgtgtggtgccattagatgagatcaaagaagccgcaaatgcagca
aatatccattcttttattgaaggtctccctgagaaatacaacacacaagttggactgaaa
ggagcacagctttctggcggccagaaacaaagactagctattgcaagggctcttctccaa
aaacccaaaattttattgttggatgaggccacttcagccctcgataatgacagtgagaag
gtggttcagcatgcccttgataaagccaggacgggaaggacatgcctagtggtcactcac
aggctctctgcaattcagaacgcagatttgatagtggttctgcacaatggaaagataaag
gaacaaggaactcatcaagagctcctgagaaatcgagacatatattttaagttagtgaat
gcacagtcagtgcagtga

>gi568815591r:20684293_20885762|GENSCAN_predicted_peptide_2|140_aa
MKAAVQRDQDPSESSVNVSVLQQGSPIPRPRTSTNPWPVRNRAAEQEMGPSSCRKTSSGL
PLILHYGDLYNYFIICYNVIIIEIKYSINVKMHLNHPKTTAPLPRSVEKLSSRKLVPGAK
KNNKKKKKKKKKKKKKKKKK

>gi568815591r:20684293_20885762|GENSCAN_predicted_CDS_2|423_bp
atgaaggcagctgtccagagagatcaagatccatcagagtcatctgtaaatgttagtgtg
ttacagcaggggtccccaatccccagaccacggaccagtaccaatccatggcctgttagg
aaccgggctgcagagcaggagatgggaccatctagttgcaggaaaacaagctcaggtctc
ccactgatcctacattatggtgatttgtataattattttattatatgctacaatgtaatc
ataatagaaataaagtactcaataaatgtaaaaatgcacttgaatcatcccaaaaccact
gccccacttccccggtccgtggaaaaactgtcttccaggaaactggtccctggtgccaaa
aagaataataagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaaa
taa

>gi568815591r:20684293_20885762|GENSCAN_predicted_peptide_3|276_aa
MGCSGPQPEGSGGPGPGPGLAGRPQTTTSLFAATCKRTVRIASSEPSPGGPRGLSQCTGH
FEELGRGKRRGTKKKRQTDIGRSKLYKLWVSGCQKSPPPSPDSLSRTSGDAQGPGRVLRS
RGAQYSGSGTKQPSARAALFCPGLQPLPLHRSAQACQPSRSCPREARCLPGTGLVQLYLQ
WPFPLKVTPFTTWGVEEGRTRKREREIKARRGAGSGCNGFRQRYPWKGKARARDSDACYL
LVHIPFTKLSHRRKKEEGQKQKETESESDAIGKGWS

>gi568815591r:20684293_20885762|GENSCAN_predicted_CDS_3|831_bp
atgggctgctccggcccgcagcccgaggggagcggcgggcccgggccggggccagggctc
gcggggagaccccagaccaccacctcactcttcgctgctacgtgcaagcggaccgtgcgg
atcgccagttcggaaccctccccgggagggccccggggtctttctcaatgtactgggcac
ttcgaggagctgggaagaggaaagcggaggggaacaaagaaaaagaggcagactgacatt
gggagatctaaactctacaaactctgggtctcgggctgccaaaagtcacccccaccaagc
cccgacagcctgagtaggacgtccggcgatgcccaggggcctggcagggtgctccgaagc
cgaggtgctcagtacagcggctctggaaccaagcagccgtctgcccgggcggcgctgttc
tgcccaggcctccagcctctccctctccaccgctccgctcaggcttgtcagccgagccgc
tcctgcccgcgcgaggcccgctgtctaccaggcactggattagtccagctctacctccag
tggccgttccctctaaaagttacgcccttcacaacctggggggtggaggaggggaggaca
aggaagagagaacgagaaataaaggcccgacgaggcgcgggttccggctgcaacgggttc
aggcagcgttacccgtggaaagggaaagccagggcccgggacagcgatgcgtgttactta
cttgtccatatcccctttacaaagttaagtcacagaaggaagaaggaagaggggcagaaa
cagaaagagacagagagcgagtcggatgcaatagggaaaggctggagttga

>gi568815591r:20684293_20885762|GENSCAN_predicted_peptide_4|745_aa
MKEDGPGLENSGSDSMLLHQQREGSTLAYGQTSIEKIQYVFNAELTFKRDKTTLAMRALA
LSLGSLREILSPLLQLAGARALRAGEQAGTRVCPGRRPAPGAGRWVKALKRDKPVWQRIP
GIRETGSRSTSEVRWTIAGKRSSSRLRGLNSPVSSKTVDVFLAGENCECAAHWDKIFVKS
CKTPELSREKCFKNERGQSFRWPPPLPPHPLLFLDSESNDSKARDFVRVHWAEITWPLWP
EMGQEEPRLGSTPLAMLAATCNKIGSPSPSPSSLSDSSSSFGKGFHPWKRSSSSSSASCN
VVGSSLSSFGVSGASRNGGSSSAAAAAAAAAAAAAALVSDSFSCGGSPGSSAFSLTSSSA
AAAAAAAAAAASSSPFANDYSVFQAPGVSGGSGGGGGGGGGGSSAHSQDGSHQPVFISKV
HTSVDGLQGIYPRVGMAHPYESWFKPSHPGLGAAGEVGSAGASSWWDVGAGWIDVQNPNS
AAALPGSLHPAAGGLQTSLHSPLGGYNSDYSGLSHSAFSSGASSHLLSPAGQHLMDGFKP
VLPGSYPDSAPSPLAGAGGSMLSAGPSAPLGGSPRSSARRYSGRATCDCPNCQEAERLGP
AGASLRRKGLHSCHIPGCGKVYGKTSHLKAHLRWHTGERPFVCNWLFCGKRFTRSDELQR
HLRTHTGEKRFACPVCNKRFMRSDHLSKHVKTHSGGGGGGGSAGSGSGGKKGSDTDSEHS
AAGSPPCHSPELLQPPEPGHRNGLE

>gi568815591r:20684293_20885762|GENSCAN_predicted_CDS_4|2238_bp
atgaaggaggatggacctgggttagaaaattcaggttccgattcaatgctcttgcaccag
cagcgtgagggttccactctagcatatggtcaaacttctatcgagaagatccagtacgta
ttcaatgcagagcttaccttcaaaagagataaaactaccttggcaatgagagcactagca
ctgtctttgggatccctgcgggagatcctctccccacttctacagttagcgggtgcccgg
gccttgcgggccggcgagcaggcggggacgcgtgtgtgccctggccggcgacctgcgccg
ggtgccgggagatgggtcaaagcattaaaacgggacaaacctgtatggcaacgcatccca
ggtatacgtgaaaccggaagcaggagcacttccgaagttcgttggaccatcgcggggaag
cgcagctcctcaaggctccgtgggttgaactctccagtcagcagcaaaaccgtcgatgtt
ttcttagcaggagaaaactgcgaatgtgcggcccactgggacaagatctttgtgaagtcc
tgcaaaacccctgaactcagtcgtgaaaaatgtttcaaaaatgagcggggccaaagcttt
cgatggccacccccactgccaccacaccccctgcttttcctggactcagagtcgaatgat
tctaaagcacgcgattttgttcgtgttcactgggccgaaataacgtggccattatggcct
gaaatgggccaggaagaaccgaggttgggatcgactcctctggccatgcttgccgctacc
tgtaataagataggcagccccagcccgtctccctcctccctctcggacagctcttcttcc
ttcggcaaaggcttccacccctggaaacgctcctcgtcctcttcttccgccagctgcaac
gtagtgggttccagtctctcaagcttcggcgtgtccggggcctccaggaacggcggctcg
tcctcggcggctgcggcggccgcggcagcagccgcggctgccgcggccctggtgtccgac
tcgttcagctgcggcggctcgcctggctccagcgccttctccctcacctccagcagcgcc
gcagccgccgccgccgccgccgcagccgccgcctccagctcgcccttcgccaacgactac
tctgttttccaggcccccggagtttccgggggcagcggcggcggcggcgggggcggcggc
ggcggctcctccgcgcactcgcaggacggctcccaccagccggtgttcatctccaaggtg
cacacctctgtggacgggctgcagggcatctacccgcgggtgggcatggcgcacccgtac
gagtcgtggtttaagccctcgcacccgggcctgggtgctgcgggcgaggtgggctcggcc
ggcgcctccagctggtgggacgtgggggccggctggatcgacgtgcagaacccgaacagc
gcggctgcgctgcccggctcgctgcaccctgccgccggggggctccaaacctcgctgcac
tcgccgctcggaggctacaactcggattactcgggcctgagtcactcggccttcagcagc
ggcgcctcctcgcacctgctcagccccgccgggcagcacctcatggacggcttcaagcca
gtgctacccggctcctacccggactcggccccgtcgccgctggccggcgcggggggctcc
atgttgagcgctgggccttcggcgccgctggggggctccccgcgctcctcagctcgccgc
tactccggccgcgccacctgcgactgccccaactgccaggaggcagagcggctgggccct
gccggggcgagcttgcggcgcaagggcctgcacagctgccacatcccgggctgcggcaag
gtgtacggcaagacttcgcacctcaaggcgcacctgcgctggcacacgggcgagcggccc
ttcgtgtgcaactggcttttctgcggcaagcgcttcacgcgctccgacgagctgcagcgg
cacctgcggacccacaccggcgagaagcgcttcgcctgtccagtttgcaacaagcgcttc
atgcgcagcgaccacctcagcaagcacgtgaagacgcacagtggcggcggcggcggcggc
ggctcggcgggctcgggcagcggcggcaagaagggcagcgacaccgacagcgagcacagc
gccgcgggcagcccgccctgccactccccagagctgctgcagccccccgagcccgggcac
cgcaacggcctagagtga

>gi568815591r:20684293_20885762|GENSCAN_predicted_peptide_5|130_aa
MGKKELKRIITRKEAFGVLGAFKMWKRGRGGSSGVNFRISVGLPVGAVINCADNTGAKNL
YIISVKGIKGRLNRLPAAGVGDMGMATVKKGKLELRKKCSGTLVKGTPLENTEGGMSGGS
ASPWLPTMNA

>gi568815591r:20684293_20885762|GENSCAN_predicted_CDS_5|393_bp
atgggaaaaaaagaacttaagaggattataacaagaaaggaagcttttggagtcctggga
gcgttcaagatgtggaagcgaggacgtggtgggtcctctggtgtgaacttccggatttct
gtgggtcttccggtaggagctgtgatcaactgtgctgacaacacaggagccaaaaacctg
tatatcatctccgtgaaggggatcaagggacggctgaacagacttcccgctgctggtgtg
ggtgacatggggatggctacagtcaagaaagggaaactagagctcagaaaaaagtgctca
ggaactctggtcaaaggaacaccactagaaaacactgaaggaggcatgtcaggtggttct
gcttctccatggctccctacgatgaatgcctag

>gi568815591r:20684293_20885762|GENSCAN_predicted_peptide_6|116_aa
MPNAIKKFVIRNTVEATAVRDISKVSIFNSEVLPKLYGKLRCAVSCAIHSKVVRNRSCEA
CKDRTPSPSLDLRVLPHDPRQSPFSKGCKSRSTILPKAVSQVLIPHVTLGVNEASS

>gi568815591r:20684293_20885762|GENSCAN_predicted_CDS_6|351_bp
atgcccaatgctattaaaaagttcgtcattcgaaacacagtagaggccacagctgtcagg
gacatttctaaagtgagtatcttcaacagcgaagtgcttcccaagctgtatgggaagtta
cgttgcgctgtgagttgtgccattcacagcaaggtagtcaggaatcgatcttgtgaagcc
tgcaaggaccgaacaccttcacccagtttagacctgcgggtgctgccccatgacccccgc
caaagcccattttctaaaggttgtaaaagcaggtcaacaatactgccaaaagcagtttct
caggtgctgattccccacgttacccttggagtcaatgaagcaagttcatga

>gi568815591r:20684293_20885762|GENSCAN_predicted_peptide_7|138_aa
MSELPFTIATKRIKYLGIQLTRDVKDLFKENYKPLLNEIKEDTNKWKNIPCSWIGRINIV
KMVILPKVIYRFNAIPIKLPMTFFTELEKTTLKFIWNQKRARIAKTILSKNNKTGGIMLP
DFKPYYKATVTKTACYWY

>gi568815591r:20684293_20885762|GENSCAN_predicted_CDS_7|417_bp
atgagtgaactcccattcacaattgctacaaagagaataaaatacctaggaatccaactt
acaagggatgtgaaggacctcttcaaggagaactacaaaccactactcaatgaaataaaa
gaggacacaaacaaatggaagaatattccatgctcatggataggaagaatcaatatcgtg
aaaatggtcatactgcccaaagtaatttatagattcaatgccattcccatcaagctacca
atgactttcttcacggaattggaaaaaactactttaaagttcatatggaaccaaaaaaga
gcccgcattgccaagacaatcctaagcaaaaacaacaaaactggaggcatcatgctacct
gacttcaaaccatactacaaagctacagtaaccaaaacagcatgttactggtactaa