GENSCAN 1.0	Date run:  4-Nov-116	Time: 19:41:18

Sequence gi568815595f:87890750_88091847 : 201098 bp : 37.44% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.07 PlyA -      9      4    6                               1.05
 1.06 Term -   1282   1218   65  2  2  110   44    37 0.221  -1.43
 1.05 Intr -   9845   9762   84  0  0   59  101    54 0.004   2.67
 1.04 Intr -  24617  24579   39  0  0  129   93    19 0.002   3.78
 1.03 Intr -  42013  41971   43  1  1   54   99    16 0.239  -3.81
 1.02 Intr -  43680  43602   79  2  1   96   59    80 0.374   4.53
 1.01 Init -  51470  51112  359  2  2   43   88   240 0.461  16.12
 1.00 Prom -  51879  51840   40                              -7.55

 2.00 Prom +  54093  54132   40                              -8.05
 2.01 Sngl +  55365  55538  174  2  0   75   42   307 0.986  19.44
 2.02 PlyA +  55657  55662    6                               1.05

 3.00 Prom +  61706  61745   40                              -5.25
 3.01 Init +  63139  63163   25  0  1   95  115    42 0.974   7.34
 3.02 Term +  78172  78389  218  2  2   11   49   185 0.761   3.22
 3.03 PlyA +  80484  80489    6                               1.05

 4.04 PlyA -  80517  80512    6                               1.05
 4.03 Term -  87659  87493  167  0  2   69   47   171 0.785   8.20
 4.02 Intr -  89384  89251  134  1  2   40   67    82 0.286   0.67
 4.01 Init -  91055  90952  104  2  2   81   39    47 0.105  -1.14
 4.00 Prom -  93418  93379   40                              -3.35

 5.00 Prom +  98194  98233   40                              -4.75
 5.01 Init + 100001 100853  853  1  1   61   87   425 0.038  34.55
 5.02 Intr + 106675 106754   80  2  2   33  100    86 0.042   2.65
 5.03 Term + 114350 114466  117  1  0   93   45    80 0.554   1.76
 5.04 PlyA + 115119 115124    6                               1.05

 6.04 PlyA - 116697 116692    6                               1.05
 6.03 Term - 125311 124918  394  0  1   23   55   261 0.289   9.82
 6.02 Intr - 126016 125727  290  1  2   56  -26   214 0.364   1.92
 6.01 Init - 126155 126075   81  2  0   53  105    64 0.824   5.62
 6.00 Prom - 126426 126387   40                              -3.95

 7.07 PlyA - 126481 126476    6                               1.05
 7.06 Term - 137854 137641  214  0  1   84   43   169 0.111   7.72
 7.05 Intr - 149591 149548   44  2  2   53   75    55 0.168  -3.18
 7.04 Intr - 150103 150041   63  1  0   97   80    45 0.837   2.60
 7.03 Intr - 150631 150444  188  2  2   23  105   150 0.576   8.69
 7.02 Intr - 151551 151349  203  2  2   53   26   125 0.270   0.81
 7.01 Init - 152168 152089   80  2  2   69   13   111 0.833   2.29
 7.00 Prom - 153146 153107   40                              -4.45

 8.02 PlyA - 153495 153490    6                               1.05
 8.01 Sngl - 165227 164724  504  2  0   83   42   490 0.999  39.69
 8.00 Prom - 165414 165375   40                              -8.45

 9.00 Prom + 165490 165529   40                              -4.95
 9.01 Init + 167508 167571   64  2  1   79   37    35 0.759  -1.14
 9.02 Term + 168055 168368  314  2  2   53   47   385 0.841  25.08
 9.03 PlyA + 168394 168399    6                               1.05

10.00 Prom + 168479 168518   40                             -18.06
10.01 Init + 168571 168756  186  0  0   72   94   345 0.991  32.60
10.02 Intr + 195508 195653  146  0  2   71   75   101 0.022   5.26
10.03 Intr + 200265 200337   73  0  1   87   89    26 0.003   1.09

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term +  66223  66251   29  2  2   98   43    41 0.820  -2.14
S.002 Term + 169248 169310   63  2  0  120   46    45 0.915   0.41


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815595f:87890750_88091847|GENSCAN_predicted_peptide_1|222_aa
MPESPTPLLGRGILAKAGAIIHLNIGEGTPICCPLLEEGINPEVWATGGQYGRAKNAHLV
QVELKDSASFPYQRQYPLRPEAQQGLQKIKDLKAQGLVKPCNSPCNTPILGVQKPNGQWR
DKAVPGGQGQSSMESHRYGLLEWGQRNSAVSPSGPGLFLVGNSGVSSWFGFTAGLCYILL
IFSPASTLTTFVMEQSVTLLKCFCKIQGRREDTTMWKGENVS

>gi568815595f:87890750_88091847|GENSCAN_predicted_CDS_1|669_bp
atgcctgaaagccccactcccttgttagggagaggcattctagcaaaagcaggggccata
atacacctgaacataggagaaggaacacccatttgttgtcccctgcttgaggaaggaatt
aatcctgaagtctgggcaacaggaggacaatatggacgagcaaagaatgcccatcttgtt
caagttgaactaaaggattctgcctcctttccctaccaaaggcagtacccccttagaccc
gaggcccaacaaggactccaaaagattaaggacctaaaagcccaaggcctagtaaaacca
tgcaatagcccctgcaatactccaattttaggagtacagaaacccaatggacagtggaga
gacaaagcagttccaggtggtcaagggcagtcctccatggagagtcatagatatggactg
ttggaatggggacagaggaattcggctgtgagtccatctggtcctggactctttttggtt
ggtaattcaggggtttcttcctggtttggattcactgctggcttatgttatattctgctc
attttttcccctgcttctacccttaccaccttcgtgatggagcagtcagtcaccctgctg
aaatgtttctgcaagatccagggaagaagagaagatactactatgtggaagggtgaaaat
gtgtcttga

>gi568815595f:87890750_88091847|GENSCAN_predicted_peptide_2|57_aa
MQEQWQAFSPIGSGNGRIAGSGAQRTPCRIQRGGSQRRYATAANGSGGLRAKAQLEP

>gi568815595f:87890750_88091847|GENSCAN_predicted_CDS_2|174_bp
atgcaggaacaatggcaagcctttagcccaatcgggagcggcaatgggcgcatcgctgga
tcaggagcacagcggacaccctgccggatccagaggggtggaagtcagcggcggtatgcg
acggcggcaaacggcagtggtggacttcgagcaaaagctcagctcgaaccataa

>gi568815595f:87890750_88091847|GENSCAN_predicted_peptide_3|80_aa
MDENSGHYATLAMAKRDQGTAWAMDSDGASTKPWQLPRGIESASAQQSKIEVWKPPPRFQ
RMYGNTWMSTQKFAAGMKPS

>gi568815595f:87890750_88091847|GENSCAN_predicted_CDS_3|243_bp
atggatgaaaatagcggtcattatgccactctagccatggctaaaagggaccaaggtaca
gcttgggccatggattcagatggtgcaagcaccaagccttggcagctcccacgtggtatt
gagtctgcaagtgcacagcagtcaaaaattgaggtttggaaacctccgcctagatttcag
aggatgtatggaaacacctggatgtccacccagaagtttgctgcaggaatgaagccctca
tga

>gi568815595f:87890750_88091847|GENSCAN_predicted_peptide_4|134_aa
MTILEKMTPHSMNTLKPATGAPAMEKRGNTHVQTQTRIWDPLNGRTERAVTQTGLKHTLL
LATVWAMRREELWPFQEHRFIILPELPRTQDLSNERAVTQTGLKHSSPTHQVVGDEKERR
AAALLGAQGVVHSR

>gi568815595f:87890750_88091847|GENSCAN_predicted_CDS_4|405_bp
atgacaatcttagagaaaatgacaccacattcaatgaacacactgaaaccagctacagga
gcacctgctatggaaaagagaggaaatacacatgtacagactcagacaagaatttgggac
ccactgaatggcagaactgaaagagctgtaacacaaacagggctgaaacacaccctgctg
cttgccacagtgtgggcaatgaggagagaagagttgtggcctttccaggaacacagattt
atcattcttcctgaacttccaagaactcaggacctgtcaaatgaaagagctgtaacacaa
acaggactgaaacacagctccccgactcatcaagttgtgggtgatgagaaggaaagaaga
gctgcggcccttctgggagctcagggagtggtgcactcgagatga

>gi568815595f:87890750_88091847|GENSCAN_predicted_peptide_5|349_aa
MDFLNSSDQNLTSEELLNRMPSKILVSLTLSGLALMTTTINSLVIAAIIVTRKLHHPANY
LICSLAVTDFLVAVLVMPFSIVYIVRESWIMGQVVCDIWLSVDITCCTCSILHLSAIALD
RYRAITDAVEYARKRTPKHAGIMITIVWIISVFISMPPLFWRHQGTSRDDECIIKHDHIV
STIYSTFGAFYIPLALILILYYKIYRAAKTLYHKRQASRIAKEEVNGQVLLESGEKSTKS
VSTSYVLEKSLSDPSTDFDKIHSTVRSLRSEFKHEKSWRRQKISGVSQRAFDTQPGVLHC
GFPVAECGEEPNVPFILNLSDFIITRKSEKGVRDFFIKQKKKRTDSKLP

>gi568815595f:87890750_88091847|GENSCAN_predicted_CDS_5|1050_bp
atggatttcttaaattcatctgatcaaaacttgacctcagaggaactgttaaacagaatg
ccatccaaaattctggtgtccctcactctgtctgggctggcactgatgacaacaactatc
aactcccttgtgatcgctgcaattattgtgacccggaagctgcaccatccagccaattat
ttaatttgttcccttgcagtcacagattttcttgtggctgtcctggtgatgcccttcagc
attgtgtatattgtgagagagagctggattatggggcaagtggtctgtgacatttggctg
agtgttgacattacctgctgcacgtgctccatcttgcatctctcagctatagctttggat
cggtatcgagcaatcacagatgctgttgagtatgccaggaaaaggactccaaagcatgct
ggcattatgattacaatagtttggattatatctgtttttatctctatgcctcctctattc
tggaggcaccaaggaactagcagagatgatgaatgcatcatcaagcacgaccacattgtt
tccaccatttactcaacatttggagctttctacatcccactggcattgattttgatcctt
tactacaaaatatatagagcagcaaagacattataccacaagagacaagcaagtaggatt
gcaaaggaggaggtgaatggccaagtccttttggagagtggtgagaaaagcactaaatca
gtttccacatcctatgtactagaaaagtctttatctgacccatcaacagactttgataaa
attcatagcacagtgagaagtctcaggtctgaattcaagcatgagaaatcttggagaagg
caaaagatctcaggagtgagtcagagggcatttgacacgcaacctggtgttctgcattgt
gggtttcctgttgctgaatgtggagaagagccaaatgtcccttttatcctcaatctctct
gactttatcatcactaggaagagtgagaaaggagtcagagatttcttcattaaacagaag
aagaaaaggacagattccaaattaccgtaa

>gi568815595f:87890750_88091847|GENSCAN_predicted_peptide_6|254_aa
MKRRPIVSEIDGFLVSLTSRMKPRTLEMCSEFLPSGGVPGLTGSGVKLWTFAVGVTALKA
ERLELFFSPGGFVVSLASGVKLQTFAVSVTAHKGSVDPKSEQQQDLLQRAKEQSFRNMEG
DRSGPWVVDRTGRPGAGGGARRGGSAAQEPTEGVGGSGMAGCRSRALSRGKAAKARREIE
RSAGGLALLGDPVHPPQPLAQVLSPSLPGASRAGRLLRVPARQAHADPELQLARRRRAQP
GFPLAPLRAHLPAS

>gi568815595f:87890750_88091847|GENSCAN_predicted_CDS_6|765_bp
atgaagaggagacctattgtgtccgaaattgatgggttcttggtctcactgacttcaaga
atgaagccacggaccctcgagatgtgttcggagtttcttccttctggtggggttcctggt
ctcactggctcaggagtgaagctgtggacctttgccgtgggtgtcacagctcttaaggca
gagcgtctggagttgttcttttctcccggtgggttcgtggtctcgctggcttcaggagtg
aagctgcagaccttcgcggtaagtgttacagctcataaaggcagtgtggacccaaagagt
gagcagcagcaagatttattacaaagagcgaaagaacaaagcttccgcaatatggaaggg
gaccgcagcggcccttgggtggttgataggactggacgcccgggagcagggggcggcgct
cgtaggggaggctcggccgcacaggagcccacggagggggtgggaggctcaggcatggcg
ggctgcaggtcccgagccctgtcccgcgggaaggcagctaaggcccggcgagaaattgag
cgcagcgctggtgggctggcactgctgggggacccagtacaccctccgcagccgctggcc
caggtgctaagcccctcattgcccggggccagcagggctggccggctgctccgagtgccg
gcccgccaagcccacgccgacccggaactccagctggcccgcaggcgccgtgcccagccc
gggttcccactcgcgcctctccgtgcacacctccccgcaagctga

>gi568815595f:87890750_88091847|GENSCAN_predicted_peptide_7|263_aa
MGPCGKALMNLSAIEPLNVNGVPREPQKHHWHKYTQQLTESPHWCPDLWSVGYSGGKGQV
ELRLPRDTIKQKPEHIPKGIAEISAPIQGLERRRAHLVNDRKNSQFCLRLRTKGGSATDP
GCLATSLPGPYDPAIQWCWKCLQQIGKPFGALGRPLEPAPMASLEVLYIHLVEEDKIQWA
HEKSGHGGSDTGRWLKCLTTQFDSPLYPELLLGIQEESGHMNKLKMVNVGDFIADESGSQ
QDGELERGWSGKVVFPWNSTITS

>gi568815595f:87890750_88091847|GENSCAN_predicted_CDS_7|792_bp
atgggcccgtgtgggaaggccctgatgaacctcagtgccattgaacccctaaatgtcaat
ggggtccctcgtgaaccccaaaagcatcattggcataaatatactcaacagctgacagaa
tccccacattggtgccctgacctgtggagtgtgggctattccggtggcaaaggccaagta
gaattacgtctacctagggatacaataaaacaaaagccagagcacattcctaaagggatt
gcagagatcagtgcccccattcaaggacttgaaagacgtagagcccatctagtgaatgat
cggaaaaacagccagttttgtctgagactcagaacaaaaggaggttctgccacagatcca
ggctgccttgcaacttctttgccagggccatatgatcctgcaatccagtggtgttggaag
tgtctgcagcagatagggaagccatttggagcccttggcaggcccctagagcctgcacct
atggcctcactggaagttctctacattcacttggtggaggaagataagattcagtgggct
catgaaaaaagcggccatggtggcagtgatacaggcagatggcttaagtgtttaacaact
cagtttgacagccctctgtatcccgagctcttgttgggcatccaggaagaatcaggacac
atgaacaaattgaagatggtaaatgtgggggattttattgctgatgaaagtggctctcag
caggatggagaactggaaaggggatggagtgggaaggtggtcttcccctggaattcaacc
attaccagctga

>gi568815595f:87890750_88091847|GENSCAN_predicted_peptide_8|167_aa
MERFVVTAPPARNRSKTALYVTPLDRVTEFGGELHEDGGKLFCTSCNVVLNHVRKSAISD
HLKSKTHTKRKAEFEEQNVRKKQRPLTASLQCNSTAQTEKVSVIQDFVKMCLEANIPLEK
ADHPAVRAFLSRHVKNGGSIPKSDQLRRAYLPDGYENENQLLNSQDC

>gi568815595f:87890750_88091847|GENSCAN_predicted_CDS_8|504_bp
atggagcgatttgtagtaacagcaccacctgctcgaaaccgttctaagactgctttgtat
gtgactcccctggatcgagtcactgagtttggaggtgagctgcatgaagatggaggaaaa
ctcttctgcacttcttgcaatgtggttctgaatcatgttcgcaagtctgccattagtgac
cacctcaagtcaaagactcataccaagaggaaggcagaatttgaagagcagaatgtgaga
aagaagcagaggcccctaactgcatctcttcagtgcaacagtactgcgcaaacagagaaa
gtcagtgttatccaggactttgtgaaaatgtgcctggaagccaacatcccacttgagaag
gctgatcacccagcagtccgtgctttcctatctcgccatgtgaagaatggaggctccata
cctaagtcagaccagctacggagggcatatcttcctgatggatatgagaatgagaatcaa
ctcctcaactcacaagattgttga

>gi568815595f:87890750_88091847|GENSCAN_predicted_peptide_9|125_aa
MGDGRRVTEKMNKNVNNCHHAAPWYRRIEAAVRESGRGPAGKEKKRKKEEQGNKGGGGSV
AAAVAAVARSSPAAAAVSPAAPRPPAPPMAEPVGGPQQPPSSIDQQTAGLSNRLSISPIV
VERRA

>gi568815595f:87890750_88091847|GENSCAN_predicted_CDS_9|378_bp
atgggggacggaaggagggtgactgaaaagatgaacaagaacgtcaacaactgccaccac
gcagctccttggtaccgtaggatcgaggccgccgttagggaaagtggacgaggcccggcc
ggaaaggaaaagaaaaggaagaaagaggagcaagggaataagggaggaggaggatccgtc
gctgccgccgtcgccgccgttgcccgatcgagccccgcggcggccgccgtgtcccccgcc
gcgccccgtccgcctgcaccgcctatggcagagcccgtaggcggtccccagcaaccgccg
agcagcattgaccaacagacggccggtttatcaaacagactgtcgatttcaccaatagta
gtggaaaggcgggcatga

>gi568815595f:87890750_88091847|GENSCAN_predicted_peptide_10|135_aa
MAEEESDQEAERLGEELVAIVESPLGPVGLRAAGDGRGGAGSGNCGGGVGISSRDYCRRF
CQVVEDYAGRWQVPLPQLQVLQTALCCFTTASASFPDECEHVQYVLSSLAVYTNTIVTVA
YGIQYSSMLYRFVAQ

>gi568815595f:87890750_88091847|GENSCAN_predicted_CDS_10|405_bp
atggcggaggaagagagcgaccaagaggccgaacgcctcggagaagagcttgtggccatt
gtggagtccccgctgggccctgtggggcttagagctgcgggcgacggcagaggcggcgct
ggcagcggcaactgcggcggcggcgtcggaatcagcagtcgggattactgccgacgcttc
tgtcaggtggttgaagattatgctggaagatggcaggtccctttgccacagcttcaggtt
cttcagactgccctttgttgttttacaacagccagtgcatcattcccagatgaatgtgag
catgtacaatatgttttgagtagccttgctgtatacacaaatactattgttacagttgcc
tatggtattcagtacagtagcatgctatacaggtttgtagcccag