Result of FASTA (omim) for pF1KB9841
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB9841, 358 aa
  1>>>pF1KB9841 358 - 358 aa - 358 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.1770+/-0.00035; mu= 17.7826+/- 0.022
 mean_var=78.0107+/-15.392, 0's: 0 Z-trim(115.9): 49  B-trim: 0 in 0/52
 Lambda= 0.145210
 statistics sampled from 26558 (26617) to 26558 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.694), E-opt: 0.2 (0.312), width:  16
 Scan time:  8.270

The best scores are:                                      opt bits E(85289)
XP_016856533 (OMIM: 108770,121013,612474,614049) P ( 358) 2469 526.6 3.2e-149
XP_005273008 (OMIM: 108770,121013,612474,614049) P ( 358) 2469 526.6 3.2e-149
NP_005257 (OMIM: 108770,121013,612474,614049) gap  ( 358) 2469 526.6 3.2e-149
NP_859054 (OMIM: 108770,121013,612474,614049) gap  ( 358) 2469 526.6 3.2e-149
XP_011507719 (OMIM: 116200,600897,612474) PREDICTE ( 427) 1032 225.6 1.6e-58
XP_011507718 (OMIM: 116200,600897,612474) PREDICTE ( 433) 1032 225.6 1.6e-58
NP_005258 (OMIM: 116200,600897,612474) gap junctio ( 433) 1032 225.6 1.6e-58
XP_011533350 (OMIM: 121015,601885) PREDICTED: gap  ( 435) 1023 223.8 5.8e-58
NP_068773 (OMIM: 121015,601885) gap junction alpha ( 435) 1023 223.8 5.8e-58
NP_002051 (OMIM: 121012) gap junction alpha-4 prot ( 333)  940 206.3 8.2e-53
XP_005270807 (OMIM: 121012) PREDICTED: gap junctio ( 333)  940 206.3 8.2e-53
XP_016856532 (OMIM: 121012) PREDICTED: gap junctio ( 333)  940 206.3 8.2e-53
NP_115991 (OMIM: 611924) gap junction alpha-10 pro ( 543)  916 201.4 3.8e-51
NP_110399 (OMIM: 611923) gap junction alpha-9 prot ( 515)  909 199.9   1e-50
NP_000156 (OMIM: 104100,121014,133200,164200,18610 ( 382)  883 194.4 3.6e-49
XP_011533351 (OMIM: 121011,124500,148210,148350,14 ( 226)  471 107.9 2.3e-23
NP_003995 (OMIM: 121011,124500,148210,148350,14920 ( 226)  471 107.9 2.3e-23
NP_001103690 (OMIM: 129500,220290,304400,604418,61 ( 261)  466 106.9 5.3e-23
XP_016875847 (OMIM: 129500,220290,304400,604418,61 ( 261)  466 106.9 5.3e-23
NP_001103689 (OMIM: 129500,220290,304400,604418,61 ( 261)  466 106.9 5.3e-23
XP_016875848 (OMIM: 129500,220290,304400,604418,61 ( 261)  466 106.9 5.3e-23
NP_006774 (OMIM: 129500,220290,304400,604418,61264 ( 261)  466 106.9 5.3e-23
XP_016875846 (OMIM: 129500,220290,304400,604418,61 ( 261)  466 106.9 5.3e-23
XP_016875849 (OMIM: 129500,220290,304400,604418,61 ( 261)  466 106.9 5.3e-23
NP_001103691 (OMIM: 129500,220290,304400,604418,61 ( 261)  466 106.9 5.3e-23
NP_001073852 (OMIM: 608655) gap junction gamma-1 p ( 396)  449 103.5 8.6e-22
XP_005256977 (OMIM: 608655) PREDICTED: gap junctio ( 396)  449 103.5 8.6e-22
XP_005256978 (OMIM: 608655) PREDICTED: gap junctio ( 396)  449 103.5 8.6e-22
NP_005488 (OMIM: 608655) gap junction gamma-1 prot ( 396)  449 103.5 8.6e-22
NP_065168 (OMIM: 608803,608804,613206,613480) gap  ( 439)  446 102.9 1.4e-21
NP_000157 (OMIM: 302800,304040) gap junction beta- ( 283)  436 100.6 4.4e-21
NP_001091111 (OMIM: 302800,304040) gap junction be ( 283)  436 100.6 4.4e-21
XP_011529209 (OMIM: 302800,304040) PREDICTED: gap  ( 283)  436 100.6 4.4e-21
XP_016884897 (OMIM: 302800,304040) PREDICTED: gap  ( 283)  436 100.6 4.4e-21
XP_011538981 (OMIM: 133200,605425) PREDICTED: gap  ( 266)  414 96.0   1e-19
NP_694944 (OMIM: 133200,605425) gap junction beta- ( 266)  414 96.0   1e-19
NP_001005752 (OMIM: 133200,220290,603324,612644) g ( 270)  414 96.0   1e-19
NP_076872 (OMIM: 133200,220290,603324,612644) gap  ( 270)  414 96.0   1e-19
NP_065711 (OMIM: 607058) gap junction delta-2 prot ( 321)  403 93.8 5.8e-19
XP_005248773 (OMIM: 611921) PREDICTED: gap junctio ( 223)  394 91.7 1.6e-18
NP_940970 (OMIM: 611921) gap junction beta-7 prote ( 223)  394 91.7 1.6e-18
NP_005259 (OMIM: 604493) gap junction beta-5 prote ( 273)  392 91.4 2.5e-18
XP_005270808 (OMIM: 604493) PREDICTED: gap junctio ( 273)  392 91.4 2.5e-18
NP_689343 (OMIM: 607425) gap junction delta-3 prot ( 294)  387 90.4 5.6e-18
XP_016877927 (OMIM: 607058) PREDICTED: gap junctio ( 270)  342 80.9 3.6e-15
NP_853516 (OMIM: 611925) gap junction gamma-3 prot ( 279)  318 75.9 1.2e-13
NP_699199 (OMIM: 611922) gap junction delta-4 prot ( 370)  286 69.3 1.5e-11


>>XP_016856533 (OMIM: 108770,121013,612474,614049) PREDI  (358 aa)
 initn: 2469 init1: 2469 opt: 2469  Z-score: 2799.9  bits: 526.6 E(85289): 3.2e-149
Smith-Waterman score: 2469; 100.0% identity (100.0% similar) in 358 aa overlap (1-358:1-358)

               10        20        30        40        50        60
pF1KB9 MGDWSFLGNFLEEVHKHSTVVGKVWLTVLFIFRMLVLGTAAESSWGDEQADFRCDTIQPG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MGDWSFLGNFLEEVHKHSTVVGKVWLTVLFIFRMLVLGTAAESSWGDEQADFRCDTIQPG
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB9 CQNVCYDQAFPISHIRYWVLQIIFVSTPSLVYMGHAMHTVRMQEKRKLREAERAKEVRGS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 CQNVCYDQAFPISHIRYWVLQIIFVSTPSLVYMGHAMHTVRMQEKRKLREAERAKEVRGS
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB9 GSYEYPVAEKAELSCWEEGNGRIALQGTLLNTYVCSILIRTTMEVGFIVGQYFIYGIFLT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GSYEYPVAEKAELSCWEEGNGRIALQGTLLNTYVCSILIRTTMEVGFIVGQYFIYGIFLT
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB9 TLHVCRRSPCPHPVNCYVSRPTEKNVFIVFMLAVAALSLLLSLAELYHLGWKKIRQRFVK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 TLHVCRRSPCPHPVNCYVSRPTEKNVFIVFMLAVAALSLLLSLAELYHLGWKKIRQRFVK
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB9 PRQHMAKCQLSGPSVGIVQSCTPPPDFNQCLENGPGGKFFNPFSNNMASQQNTDNLVTEQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 PRQHMAKCQLSGPSVGIVQSCTPPPDFNQCLENGPGGKFFNPFSNNMASQQNTDNLVTEQ
              250       260       270       280       290       300

              310       320       330       340       350        
pF1KB9 VRGQEQTPGEGFIQVRYGQKPEVPNGVSPGHRLPHGYHSDKRRLSKASSKARSDDLSV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VRGQEQTPGEGFIQVRYGQKPEVPNGVSPGHRLPHGYHSDKRRLSKASSKARSDDLSV
              310       320       330       340       350        

>>XP_005273008 (OMIM: 108770,121013,612474,614049) PREDI  (358 aa)
 initn: 2469 init1: 2469 opt: 2469  Z-score: 2799.9  bits: 526.6 E(85289): 3.2e-149
Smith-Waterman score: 2469; 100.0% identity (100.0% similar) in 358 aa overlap (1-358:1-358)

               10        20        30        40        50        60
pF1KB9 MGDWSFLGNFLEEVHKHSTVVGKVWLTVLFIFRMLVLGTAAESSWGDEQADFRCDTIQPG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MGDWSFLGNFLEEVHKHSTVVGKVWLTVLFIFRMLVLGTAAESSWGDEQADFRCDTIQPG
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB9 CQNVCYDQAFPISHIRYWVLQIIFVSTPSLVYMGHAMHTVRMQEKRKLREAERAKEVRGS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 CQNVCYDQAFPISHIRYWVLQIIFVSTPSLVYMGHAMHTVRMQEKRKLREAERAKEVRGS
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB9 GSYEYPVAEKAELSCWEEGNGRIALQGTLLNTYVCSILIRTTMEVGFIVGQYFIYGIFLT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 GSYEYPVAEKAELSCWEEGNGRIALQGTLLNTYVCSILIRTTMEVGFIVGQYFIYGIFLT
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB9 TLHVCRRSPCPHPVNCYVSRPTEKNVFIVFMLAVAALSLLLSLAELYHLGWKKIRQRFVK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 TLHVCRRSPCPHPVNCYVSRPTEKNVFIVFMLAVAALSLLLSLAELYHLGWKKIRQRFVK
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB9 PRQHMAKCQLSGPSVGIVQSCTPPPDFNQCLENGPGGKFFNPFSNNMASQQNTDNLVTEQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PRQHMAKCQLSGPSVGIVQSCTPPPDFNQCLENGPGGKFFNPFSNNMASQQNTDNLVTEQ
              250       260       270       280       290       300

              310       320       330       340       350        
pF1KB9 VRGQEQTPGEGFIQVRYGQKPEVPNGVSPGHRLPHGYHSDKRRLSKASSKARSDDLSV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 VRGQEQTPGEGFIQVRYGQKPEVPNGVSPGHRLPHGYHSDKRRLSKASSKARSDDLSV
              310       320       330       340       350        

>>NP_005257 (OMIM: 108770,121013,612474,614049) gap junc  (358 aa)
 initn: 2469 init1: 2469 opt: 2469  Z-score: 2799.9  bits: 526.6 E(85289): 3.2e-149
Smith-Waterman score: 2469; 100.0% identity (100.0% similar) in 358 aa overlap (1-358:1-358)

               10        20        30        40        50        60
pF1KB9 MGDWSFLGNFLEEVHKHSTVVGKVWLTVLFIFRMLVLGTAAESSWGDEQADFRCDTIQPG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 MGDWSFLGNFLEEVHKHSTVVGKVWLTVLFIFRMLVLGTAAESSWGDEQADFRCDTIQPG
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB9 CQNVCYDQAFPISHIRYWVLQIIFVSTPSLVYMGHAMHTVRMQEKRKLREAERAKEVRGS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 CQNVCYDQAFPISHIRYWVLQIIFVSTPSLVYMGHAMHTVRMQEKRKLREAERAKEVRGS
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB9 GSYEYPVAEKAELSCWEEGNGRIALQGTLLNTYVCSILIRTTMEVGFIVGQYFIYGIFLT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 GSYEYPVAEKAELSCWEEGNGRIALQGTLLNTYVCSILIRTTMEVGFIVGQYFIYGIFLT
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB9 TLHVCRRSPCPHPVNCYVSRPTEKNVFIVFMLAVAALSLLLSLAELYHLGWKKIRQRFVK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 TLHVCRRSPCPHPVNCYVSRPTEKNVFIVFMLAVAALSLLLSLAELYHLGWKKIRQRFVK
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB9 PRQHMAKCQLSGPSVGIVQSCTPPPDFNQCLENGPGGKFFNPFSNNMASQQNTDNLVTEQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 PRQHMAKCQLSGPSVGIVQSCTPPPDFNQCLENGPGGKFFNPFSNNMASQQNTDNLVTEQ
              250       260       270       280       290       300

              310       320       330       340       350        
pF1KB9 VRGQEQTPGEGFIQVRYGQKPEVPNGVSPGHRLPHGYHSDKRRLSKASSKARSDDLSV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_005 VRGQEQTPGEGFIQVRYGQKPEVPNGVSPGHRLPHGYHSDKRRLSKASSKARSDDLSV
              310       320       330       340       350        

>>NP_859054 (OMIM: 108770,121013,612474,614049) gap junc  (358 aa)
 initn: 2469 init1: 2469 opt: 2469  Z-score: 2799.9  bits: 526.6 E(85289): 3.2e-149
Smith-Waterman score: 2469; 100.0% identity (100.0% similar) in 358 aa overlap (1-358:1-358)

               10        20        30        40        50        60
pF1KB9 MGDWSFLGNFLEEVHKHSTVVGKVWLTVLFIFRMLVLGTAAESSWGDEQADFRCDTIQPG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_859 MGDWSFLGNFLEEVHKHSTVVGKVWLTVLFIFRMLVLGTAAESSWGDEQADFRCDTIQPG
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB9 CQNVCYDQAFPISHIRYWVLQIIFVSTPSLVYMGHAMHTVRMQEKRKLREAERAKEVRGS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_859 CQNVCYDQAFPISHIRYWVLQIIFVSTPSLVYMGHAMHTVRMQEKRKLREAERAKEVRGS
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB9 GSYEYPVAEKAELSCWEEGNGRIALQGTLLNTYVCSILIRTTMEVGFIVGQYFIYGIFLT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_859 GSYEYPVAEKAELSCWEEGNGRIALQGTLLNTYVCSILIRTTMEVGFIVGQYFIYGIFLT
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB9 TLHVCRRSPCPHPVNCYVSRPTEKNVFIVFMLAVAALSLLLSLAELYHLGWKKIRQRFVK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_859 TLHVCRRSPCPHPVNCYVSRPTEKNVFIVFMLAVAALSLLLSLAELYHLGWKKIRQRFVK
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB9 PRQHMAKCQLSGPSVGIVQSCTPPPDFNQCLENGPGGKFFNPFSNNMASQQNTDNLVTEQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_859 PRQHMAKCQLSGPSVGIVQSCTPPPDFNQCLENGPGGKFFNPFSNNMASQQNTDNLVTEQ
              250       260       270       280       290       300

              310       320       330       340       350        
pF1KB9 VRGQEQTPGEGFIQVRYGQKPEVPNGVSPGHRLPHGYHSDKRRLSKASSKARSDDLSV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_859 VRGQEQTPGEGFIQVRYGQKPEVPNGVSPGHRLPHGYHSDKRRLSKASSKARSDDLSV
              310       320       330       340       350        

>>XP_011507719 (OMIM: 116200,600897,612474) PREDICTED: g  (427 aa)
 initn: 1071 init1: 649 opt: 1032  Z-score: 1171.9  bits: 225.6 E(85289): 1.6e-58
Smith-Waterman score: 1032; 61.8% identity (83.8% similar) in 241 aa overlap (1-241:1-239)

               10        20        30        40        50        60
pF1KB9 MGDWSFLGNFLEEVHKHSTVVGKVWLTVLFIFRMLVLGTAAESSWGDEQADFRCDTIQPG
       :::::::::.::::..::::.:.::::::::::.:.::::::  :::::.:: :.: :::
XP_011 MGDWSFLGNILEEVNEHSTVIGRVWLTVLFIFRILILGTAAEFVWGDEQSDFVCNTQQPG
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB9 CQNVCYDQAFPISHIRYWVLQIIFVSTPSLVYMGHAMHTVRMQEKRKLREAERAKEVRGS
       :.:::::.:::::::: :::::::::::::.:.:::.: :::.:::: ::::.  .  :.
XP_011 CENVCYDEAFPISHIRLWVLQIIFVSTPSLMYVGHAVHYVRMEEKRKSREAEELGQQAGT
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB9 GSYEYPVAEKAELSCWEEGNGRIALQGTLLNTYVCSILIRTTMEVGFIVGQYFIYGIFLT
       ..   :   ... :   .:. .. :.:::: ::.: :...: .:::::::.::.::. . 
XP_011 NGG--PDQGSVKKSSGSKGTKKFRLEGTLLRTYICHIIFKTLFEVGFIVGHYFLYGFRIL
                130       140       150       160       170        

              190       200       210       220       230       240
pF1KB9 TLHVCRRSPCPHPVNCYVSRPTEKNVFIVFMLAVAALSLLLSLAELYHLGWKKIRQRFVK
        :. : : :::. :.:.:::::::..::.:::.::..::.:.. :: ::: : ::. . .
XP_011 PLYRCSRWPCPNVVDCFVSRPTEKTIFILFMLSVASVSLFLNVMELGHLGLKGIRSALKR
      180       190       200       210       220       230        

              250       260       270       280       290       300
pF1KB9 PRQHMAKCQLSGPSVGIVQSCTPPPDFNQCLENGPGGKFFNPFSNNMASQQNTDNLVTEQ
       :                                                           
XP_011 PVEQPLGEIPEKSLHSIAVSSIQKAKGYQLLEEEKIVSHYFPLTEVGMVETSPLPAKPFN
      240       250       260       270       280       290        

>>XP_011507718 (OMIM: 116200,600897,612474) PREDICTED: g  (433 aa)
 initn: 1104 init1: 649 opt: 1032  Z-score: 1171.8  bits: 225.6 E(85289): 1.6e-58
Smith-Waterman score: 1032; 61.8% identity (83.8% similar) in 241 aa overlap (1-241:1-239)

               10        20        30        40        50        60
pF1KB9 MGDWSFLGNFLEEVHKHSTVVGKVWLTVLFIFRMLVLGTAAESSWGDEQADFRCDTIQPG
       :::::::::.::::..::::.:.::::::::::.:.::::::  :::::.:: :.: :::
XP_011 MGDWSFLGNILEEVNEHSTVIGRVWLTVLFIFRILILGTAAEFVWGDEQSDFVCNTQQPG
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB9 CQNVCYDQAFPISHIRYWVLQIIFVSTPSLVYMGHAMHTVRMQEKRKLREAERAKEVRGS
       :.:::::.:::::::: :::::::::::::.:.:::.: :::.:::: ::::.  .  :.
XP_011 CENVCYDEAFPISHIRLWVLQIIFVSTPSLMYVGHAVHYVRMEEKRKSREAEELGQQAGT
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB9 GSYEYPVAEKAELSCWEEGNGRIALQGTLLNTYVCSILIRTTMEVGFIVGQYFIYGIFLT
       ..   :   ... :   .:. .. :.:::: ::.: :...: .:::::::.::.::. . 
XP_011 NGG--PDQGSVKKSSGSKGTKKFRLEGTLLRTYICHIIFKTLFEVGFIVGHYFLYGFRIL
                130       140       150       160       170        

              190       200       210       220       230       240
pF1KB9 TLHVCRRSPCPHPVNCYVSRPTEKNVFIVFMLAVAALSLLLSLAELYHLGWKKIRQRFVK
        :. : : :::. :.:.:::::::..::.:::.::..::.:.. :: ::: : ::. . .
XP_011 PLYRCSRWPCPNVVDCFVSRPTEKTIFILFMLSVASVSLFLNVMELGHLGLKGIRSALKR
      180       190       200       210       220       230        

              250       260       270       280       290       300
pF1KB9 PRQHMAKCQLSGPSVGIVQSCTPPPDFNQCLENGPGGKFFNPFSNNMASQQNTDNLVTEQ
       :                                                           
XP_011 PVEQPLGEIPEKSLHSIAVSSIQKAKGYQLLEEEKIVSHYFPLTEVGMVETSPLPAKPFN
      240       250       260       270       280       290        

>>NP_005258 (OMIM: 116200,600897,612474) gap junction al  (433 aa)
 initn: 1104 init1: 649 opt: 1032  Z-score: 1171.8  bits: 225.6 E(85289): 1.6e-58
Smith-Waterman score: 1032; 61.8% identity (83.8% similar) in 241 aa overlap (1-241:1-239)

               10        20        30        40        50        60
pF1KB9 MGDWSFLGNFLEEVHKHSTVVGKVWLTVLFIFRMLVLGTAAESSWGDEQADFRCDTIQPG
       :::::::::.::::..::::.:.::::::::::.:.::::::  :::::.:: :.: :::
NP_005 MGDWSFLGNILEEVNEHSTVIGRVWLTVLFIFRILILGTAAEFVWGDEQSDFVCNTQQPG
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB9 CQNVCYDQAFPISHIRYWVLQIIFVSTPSLVYMGHAMHTVRMQEKRKLREAERAKEVRGS
       :.:::::.:::::::: :::::::::::::.:.:::.: :::.:::: ::::.  .  :.
NP_005 CENVCYDEAFPISHIRLWVLQIIFVSTPSLMYVGHAVHYVRMEEKRKSREAEELGQQAGT
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB9 GSYEYPVAEKAELSCWEEGNGRIALQGTLLNTYVCSILIRTTMEVGFIVGQYFIYGIFLT
       ..   :   ... :   .:. .. :.:::: ::.: :...: .:::::::.::.::. . 
NP_005 NGG--PDQGSVKKSSGSKGTKKFRLEGTLLRTYICHIIFKTLFEVGFIVGHYFLYGFRIL
                130       140       150       160       170        

              190       200       210       220       230       240
pF1KB9 TLHVCRRSPCPHPVNCYVSRPTEKNVFIVFMLAVAALSLLLSLAELYHLGWKKIRQRFVK
        :. : : :::. :.:.:::::::..::.:::.::..::.:.. :: ::: : ::. . .
NP_005 PLYRCSRWPCPNVVDCFVSRPTEKTIFILFMLSVASVSLFLNVMELGHLGLKGIRSALKR
      180       190       200       210       220       230        

              250       260       270       280       290       300
pF1KB9 PRQHMAKCQLSGPSVGIVQSCTPPPDFNQCLENGPGGKFFNPFSNNMASQQNTDNLVTEQ
       :                                                           
NP_005 PVEQPLGEIPEKSLHSIAVSSIQKAKGYQLLEEEKIVSHYFPLTEVGMVETSPLPAKPFN
      240       250       260       270       280       290        

>>XP_011533350 (OMIM: 121015,601885) PREDICTED: gap junc  (435 aa)
 initn: 1032 init1: 627 opt: 1023  Z-score: 1161.6  bits: 223.8 E(85289): 5.8e-58
Smith-Waterman score: 1023; 61.0% identity (83.5% similar) in 236 aa overlap (1-236:1-232)

               10        20        30        40        50        60
pF1KB9 MGDWSFLGNFLEEVHKHSTVVGKVWLTVLFIFRMLVLGTAAESSWGDEQADFRCDTIQPG
       :::::::: .::....::::.::::::::::::.::::.:::. :::::.:: :.: :::
XP_011 MGDWSFLGRLLENAQEHSTVIGKVWLTVLFIFRILVLGAAAEDVWGDEQSDFTCNTQQPG
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB9 CQNVCYDQAFPISHIRYWVLQIIFVSTPSLVYMGHAMHTVRMQEKRKLREAERAKEVRGS
       :.:::::.::::::::.:.:::::::::.:.:.::..: :::.::.: :: :.  . : :
XP_011 CENVCYDRAFPISHIRFWALQIIFVSTPTLIYLGHVLHIVRMEEKKKEREEEEQLK-RES
               70        80        90       100       110          

              130       140       150       160       170       180
pF1KB9 GSYEYPVAEKAELSCWEEGNGRIALQGTLLNTYVCSILIRTTMEVGFIVGQYFIYGIFLT
        : . :  ..      ..  ::. . :.:: ::: .:...: .:::::.::::.::. : 
XP_011 PSPKEPPQDNPSS---RDDRGRVRMAGALLRTYVFNIIFKTLFEVGFIAGQYFLYGFELK
     120       130          140       150       160       170      

              190       200       210       220       230       240
pF1KB9 TLHVCRRSPCPHPVNCYVSRPTEKNVFIVFMLAVAALSLLLSLAELYHLGWKKIRQRFVK
        :. : : :::. :.:..::::::..::.::::::  ::::.. :.:::::::..:    
XP_011 PLYRCDRWPCPNTVDCFISRPTEKTIFIIFMLAVACASLLLNMLEIYHLGWKKLKQGVTS
        180       190       200       210       220       230      

              250       260       270       280       290       300
pF1KB9 PRQHMAKCQLSGPSVGIVQSCTPPPDFNQCLENGPGGKFFNPFSNNMASQQNTDNLVTEQ
                                                                   
XP_011 RLGPDASEAPLGTADPPPLPPSSRPPAVAIGFPPYYAHTAAPLGQARAVGYPGAPPPAAD
        240       250       260       270       280       290      

>>NP_068773 (OMIM: 121015,601885) gap junction alpha-3 p  (435 aa)
 initn: 1032 init1: 627 opt: 1023  Z-score: 1161.6  bits: 223.8 E(85289): 5.8e-58
Smith-Waterman score: 1023; 61.0% identity (83.5% similar) in 236 aa overlap (1-236:1-232)

               10        20        30        40        50        60
pF1KB9 MGDWSFLGNFLEEVHKHSTVVGKVWLTVLFIFRMLVLGTAAESSWGDEQADFRCDTIQPG
       :::::::: .::....::::.::::::::::::.::::.:::. :::::.:: :.: :::
NP_068 MGDWSFLGRLLENAQEHSTVIGKVWLTVLFIFRILVLGAAAEDVWGDEQSDFTCNTQQPG
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB9 CQNVCYDQAFPISHIRYWVLQIIFVSTPSLVYMGHAMHTVRMQEKRKLREAERAKEVRGS
       :.:::::.::::::::.:.:::::::::.:.:.::..: :::.::.: :: :.  . : :
NP_068 CENVCYDRAFPISHIRFWALQIIFVSTPTLIYLGHVLHIVRMEEKKKEREEEEQLK-RES
               70        80        90       100       110          

              130       140       150       160       170       180
pF1KB9 GSYEYPVAEKAELSCWEEGNGRIALQGTLLNTYVCSILIRTTMEVGFIVGQYFIYGIFLT
        : . :  ..      ..  ::. . :.:: ::: .:...: .:::::.::::.::. : 
NP_068 PSPKEPPQDNPSS---RDDRGRVRMAGALLRTYVFNIIFKTLFEVGFIAGQYFLYGFELK
     120       130          140       150       160       170      

              190       200       210       220       230       240
pF1KB9 TLHVCRRSPCPHPVNCYVSRPTEKNVFIVFMLAVAALSLLLSLAELYHLGWKKIRQRFVK
        :. : : :::. :.:..::::::..::.::::::  ::::.. :.:::::::..:    
NP_068 PLYRCDRWPCPNTVDCFISRPTEKTIFIIFMLAVACASLLLNMLEIYHLGWKKLKQGVTS
        180       190       200       210       220       230      

              250       260       270       280       290       300
pF1KB9 PRQHMAKCQLSGPSVGIVQSCTPPPDFNQCLENGPGGKFFNPFSNNMASQQNTDNLVTEQ
                                                                   
NP_068 RLGPDASEAPLGTADPPPLPPSSRPPAVAIGFPPYYAHTAAPLGQARAVGYPGAPPPAAD
        240       250       260       270       280       290      

>>NP_002051 (OMIM: 121012) gap junction alpha-4 protein   (333 aa)
 initn: 951 init1: 579 opt: 940  Z-score: 1069.2  bits: 206.3 E(85289): 8.2e-53
Smith-Waterman score: 940; 46.2% identity (72.0% similar) in 329 aa overlap (1-321:1-319)

               10        20        30        40        50        60
pF1KB9 MGDWSFLGNFLEEVHKHSTVVGKVWLTVLFIFRMLVLGTAAESSWGDEQADFRCDTIQPG
       ::::.:: ..:..:..:::::::.:::::::::.:.:: :.:: :::::.::.:.: :::
NP_002 MGDWGFLEKLLDQVQEHSTVVGKIWLTVLFIFRILILGLAGESVWGDEQSDFECNTAQPG
               10        20        30        40        50        60

               70        80        90       100       110          
pF1KB9 CQNVCYDQAFPISHIRYWVLQIIFVSTPSLVYMGHAMHTVRMQEKRKLREAE-RAKEVRG
       : :::::::::::::::::::..:::::.:::.::...  : .:. . .:.: ::  .. 
NP_002 CTNVCYDQAFPISHIRYWVLQFLFVSTPTLVYLGHVIYLSRREERLRQKEGELRALPAKD
               70        80        90       100       110       120

     120           130       140       150       160       170     
pF1KB9 SGSYEYPVA----EKAELSCWEEGNGRIALQGTLLNTYVCSILIRTTMEVGFIVGQYFIY
         . :  .:    . :..:  :.  ::. ..:.:..::: :.: ....:.::. ::. .:
NP_002 P-QVERALAAVERQMAKISVAED--GRLRIRGALMGTYVASVLCKSVLEAGFLYGQWRLY
               130       140         150       160       170       

         180       190       200       210       220       230     
pF1KB9 GIFLTTLHVCRRSPCPHPVNCYVSRPTEKNVFIVFMLAVAALSLLLSLAELYHLGWKKIR
       :  .  . ::.:.:::. :.:.:::::::..::.:::.:. .::.:.: :: ::   .  
NP_002 GWTMEPVFVCQRAPCPYLVDCFVSRPTEKTIFIIFMLVVGLISLVLNLLELVHL-LCRCL
       180       190       200       210       220       230       

         240       250       260          270       280       290  
pF1KB9 QRFVKPRQHMAKCQLSGPSVGIVQSCTPPPD---FNQCLENGPGGKFFNPFSNNMASQQN
       .: .. ::     : . :. :   :  :  :   :   . .::..     ...  .:.::
NP_002 SRGMRARQG----QDAPPTQGT--SSDPYTDQVFFYLPVGQGPSSPPCPTYNGLSSSEQN
        240           250         260       270       280       290

            300       310       320       330       340       350  
pF1KB9 TDNLVTEQVRGQEQTPGEGFIQVRYGQKPEVPNGVSPGHRLPHGYHSDKRRLSKASSKAR
         ::.::.  .. . :       . ::::                               
NP_002 WANLTTEERLASSRPPLFLDPPPQNGQKPPSRPSSSASKKQYV                 
              300       310       320       330                    




358 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 19:39:37 2016 done: Fri Nov  4 19:39:38 2016
 Total Scan time:  8.270 Total Display time:  0.030

Function used was FASTA [36.3.4 Apr, 2011]
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