Result of FASTA (ccds) for pF1KB9841
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB9841, 358 aa
  1>>>pF1KB9841 358 - 358 aa - 358 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.0482+/-0.000779; mu= 18.6117+/- 0.047
 mean_var=74.0899+/-14.573, 0's: 0 Z-trim(108.8): 25  B-trim: 22 in 1/51
 Lambda= 0.149003
 statistics sampled from 10435 (10458) to 10435 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.709), E-opt: 0.2 (0.321), width:  16
 Scan time:  2.770

The best scores are:                                      opt bits E(32554)
CCDS929.1 GJA5 gene_id:2702|Hs108|chr1             ( 358) 2469 539.8 1.3e-153
CCDS30834.1 GJA8 gene_id:2703|Hs108|chr1           ( 433) 1032 231.0 1.5e-60
CCDS9289.1 GJA3 gene_id:2700|Hs108|chr13           ( 435) 1023 229.0 5.7e-60
CCDS30669.1 GJA4 gene_id:2701|Hs108|chr1           ( 333)  940 211.1 1.1e-54
CCDS5025.1 GJA10 gene_id:84694|Hs108|chr6          ( 543)  916 206.1 5.7e-53
CCDS432.1 GJA9 gene_id:81025|Hs108|chr1            ( 515)  909 204.6 1.6e-52
CCDS5123.1 GJA1 gene_id:2697|Hs108|chr6            ( 382)  883 198.9   6e-51
CCDS9290.1 GJB2 gene_id:2706|Hs108|chr13           ( 226)  471 110.1 1.8e-24
CCDS9291.1 GJB6 gene_id:10804|Hs108|chr13          ( 261)  466 109.1 4.3e-24
CCDS11487.1 GJC1 gene_id:10052|Hs108|chr17         ( 396)  449 105.6 7.4e-23
CCDS1569.1 GJC2 gene_id:57165|Hs108|chr1           ( 439)  446 105.0 1.3e-22
CCDS14408.1 GJB1 gene_id:2705|Hs108|chrX           ( 283)  436 102.7   4e-22
CCDS383.1 GJB4 gene_id:127534|Hs108|chr1           ( 266)  414 97.9   1e-20
CCDS384.1 GJB3 gene_id:2707|Hs108|chr1             ( 270)  414 98.0   1e-20
CCDS10040.1 GJD2 gene_id:57369|Hs108|chr15         ( 321)  403 95.6   6e-20
CCDS5008.1 GJB7 gene_id:375519|Hs108|chr6          ( 223)  394 93.6 1.8e-19
CCDS382.1 GJB5 gene_id:2709|Hs108|chr1             ( 273)  392 93.2 2.7e-19
CCDS58547.1 GJD3 gene_id:125111|Hs108|chr17        ( 294)  387 92.2 6.1e-19
CCDS34697.1 GJC3 gene_id:349149|Hs108|chr7         ( 279)  318 77.3 1.7e-14
CCDS7191.1 GJD4 gene_id:219770|Hs108|chr10         ( 370)  286 70.5 2.5e-12


>>CCDS929.1 GJA5 gene_id:2702|Hs108|chr1                  (358 aa)
 initn: 2469 init1: 2469 opt: 2469  Z-score: 2871.2  bits: 539.8 E(32554): 1.3e-153
Smith-Waterman score: 2469; 100.0% identity (100.0% similar) in 358 aa overlap (1-358:1-358)

               10        20        30        40        50        60
pF1KB9 MGDWSFLGNFLEEVHKHSTVVGKVWLTVLFIFRMLVLGTAAESSWGDEQADFRCDTIQPG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS92 MGDWSFLGNFLEEVHKHSTVVGKVWLTVLFIFRMLVLGTAAESSWGDEQADFRCDTIQPG
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB9 CQNVCYDQAFPISHIRYWVLQIIFVSTPSLVYMGHAMHTVRMQEKRKLREAERAKEVRGS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS92 CQNVCYDQAFPISHIRYWVLQIIFVSTPSLVYMGHAMHTVRMQEKRKLREAERAKEVRGS
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB9 GSYEYPVAEKAELSCWEEGNGRIALQGTLLNTYVCSILIRTTMEVGFIVGQYFIYGIFLT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS92 GSYEYPVAEKAELSCWEEGNGRIALQGTLLNTYVCSILIRTTMEVGFIVGQYFIYGIFLT
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB9 TLHVCRRSPCPHPVNCYVSRPTEKNVFIVFMLAVAALSLLLSLAELYHLGWKKIRQRFVK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS92 TLHVCRRSPCPHPVNCYVSRPTEKNVFIVFMLAVAALSLLLSLAELYHLGWKKIRQRFVK
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB9 PRQHMAKCQLSGPSVGIVQSCTPPPDFNQCLENGPGGKFFNPFSNNMASQQNTDNLVTEQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS92 PRQHMAKCQLSGPSVGIVQSCTPPPDFNQCLENGPGGKFFNPFSNNMASQQNTDNLVTEQ
              250       260       270       280       290       300

              310       320       330       340       350        
pF1KB9 VRGQEQTPGEGFIQVRYGQKPEVPNGVSPGHRLPHGYHSDKRRLSKASSKARSDDLSV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS92 VRGQEQTPGEGFIQVRYGQKPEVPNGVSPGHRLPHGYHSDKRRLSKASSKARSDDLSV
              310       320       330       340       350        

>>CCDS30834.1 GJA8 gene_id:2703|Hs108|chr1                (433 aa)
 initn: 1104 init1: 649 opt: 1032  Z-score: 1200.6  bits: 231.0 E(32554): 1.5e-60
Smith-Waterman score: 1032; 61.8% identity (83.8% similar) in 241 aa overlap (1-241:1-239)

               10        20        30        40        50        60
pF1KB9 MGDWSFLGNFLEEVHKHSTVVGKVWLTVLFIFRMLVLGTAAESSWGDEQADFRCDTIQPG
       :::::::::.::::..::::.:.::::::::::.:.::::::  :::::.:: :.: :::
CCDS30 MGDWSFLGNILEEVNEHSTVIGRVWLTVLFIFRILILGTAAEFVWGDEQSDFVCNTQQPG
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB9 CQNVCYDQAFPISHIRYWVLQIIFVSTPSLVYMGHAMHTVRMQEKRKLREAERAKEVRGS
       :.:::::.:::::::: :::::::::::::.:.:::.: :::.:::: ::::.  .  :.
CCDS30 CENVCYDEAFPISHIRLWVLQIIFVSTPSLMYVGHAVHYVRMEEKRKSREAEELGQQAGT
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB9 GSYEYPVAEKAELSCWEEGNGRIALQGTLLNTYVCSILIRTTMEVGFIVGQYFIYGIFLT
       ..   :   ... :   .:. .. :.:::: ::.: :...: .:::::::.::.::. . 
CCDS30 NGG--PDQGSVKKSSGSKGTKKFRLEGTLLRTYICHIIFKTLFEVGFIVGHYFLYGFRIL
                130       140       150       160       170        

              190       200       210       220       230       240
pF1KB9 TLHVCRRSPCPHPVNCYVSRPTEKNVFIVFMLAVAALSLLLSLAELYHLGWKKIRQRFVK
        :. : : :::. :.:.:::::::..::.:::.::..::.:.. :: ::: : ::. . .
CCDS30 PLYRCSRWPCPNVVDCFVSRPTEKTIFILFMLSVASVSLFLNVMELGHLGLKGIRSALKR
      180       190       200       210       220       230        

              250       260       270       280       290       300
pF1KB9 PRQHMAKCQLSGPSVGIVQSCTPPPDFNQCLENGPGGKFFNPFSNNMASQQNTDNLVTEQ
       :                                                           
CCDS30 PVEQPLGEIPEKSLHSIAVSSIQKAKGYQLLEEEKIVSHYFPLTEVGMVETSPLPAKPFN
      240       250       260       270       280       290        

>>CCDS9289.1 GJA3 gene_id:2700|Hs108|chr13                (435 aa)
 initn: 1032 init1: 627 opt: 1023  Z-score: 1190.1  bits: 229.0 E(32554): 5.7e-60
Smith-Waterman score: 1023; 61.0% identity (83.5% similar) in 236 aa overlap (1-236:1-232)

               10        20        30        40        50        60
pF1KB9 MGDWSFLGNFLEEVHKHSTVVGKVWLTVLFIFRMLVLGTAAESSWGDEQADFRCDTIQPG
       :::::::: .::....::::.::::::::::::.::::.:::. :::::.:: :.: :::
CCDS92 MGDWSFLGRLLENAQEHSTVIGKVWLTVLFIFRILVLGAAAEDVWGDEQSDFTCNTQQPG
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB9 CQNVCYDQAFPISHIRYWVLQIIFVSTPSLVYMGHAMHTVRMQEKRKLREAERAKEVRGS
       :.:::::.::::::::.:.:::::::::.:.:.::..: :::.::.: :: :.  . : :
CCDS92 CENVCYDRAFPISHIRFWALQIIFVSTPTLIYLGHVLHIVRMEEKKKEREEEEQLK-RES
               70        80        90       100       110          

              130       140       150       160       170       180
pF1KB9 GSYEYPVAEKAELSCWEEGNGRIALQGTLLNTYVCSILIRTTMEVGFIVGQYFIYGIFLT
        : . :  ..      ..  ::. . :.:: ::: .:...: .:::::.::::.::. : 
CCDS92 PSPKEPPQDNPSS---RDDRGRVRMAGALLRTYVFNIIFKTLFEVGFIAGQYFLYGFELK
     120       130          140       150       160       170      

              190       200       210       220       230       240
pF1KB9 TLHVCRRSPCPHPVNCYVSRPTEKNVFIVFMLAVAALSLLLSLAELYHLGWKKIRQRFVK
        :. : : :::. :.:..::::::..::.::::::  ::::.. :.:::::::..:    
CCDS92 PLYRCDRWPCPNTVDCFISRPTEKTIFIIFMLAVACASLLLNMLEIYHLGWKKLKQGVTS
        180       190       200       210       220       230      

              250       260       270       280       290       300
pF1KB9 PRQHMAKCQLSGPSVGIVQSCTPPPDFNQCLENGPGGKFFNPFSNNMASQQNTDNLVTEQ
                                                                   
CCDS92 RLGPDASEAPLGTADPPPLPPSSRPPAVAIGFPPYYAHTAAPLGQARAVGYPGAPPPAAD
        240       250       260       270       280       290      

>>CCDS30669.1 GJA4 gene_id:2701|Hs108|chr1                (333 aa)
 initn: 951 init1: 579 opt: 940  Z-score: 1095.2  bits: 211.1 E(32554): 1.1e-54
Smith-Waterman score: 940; 46.2% identity (72.0% similar) in 329 aa overlap (1-321:1-319)

               10        20        30        40        50        60
pF1KB9 MGDWSFLGNFLEEVHKHSTVVGKVWLTVLFIFRMLVLGTAAESSWGDEQADFRCDTIQPG
       ::::.:: ..:..:..:::::::.:::::::::.:.:: :.:: :::::.::.:.: :::
CCDS30 MGDWGFLEKLLDQVQEHSTVVGKIWLTVLFIFRILILGLAGESVWGDEQSDFECNTAQPG
               10        20        30        40        50        60

               70        80        90       100       110          
pF1KB9 CQNVCYDQAFPISHIRYWVLQIIFVSTPSLVYMGHAMHTVRMQEKRKLREAE-RAKEVRG
       : :::::::::::::::::::..:::::.:::.::...  : .:. . .:.: ::  .. 
CCDS30 CTNVCYDQAFPISHIRYWVLQFLFVSTPTLVYLGHVIYLSRREERLRQKEGELRALPAKD
               70        80        90       100       110       120

     120           130       140       150       160       170     
pF1KB9 SGSYEYPVA----EKAELSCWEEGNGRIALQGTLLNTYVCSILIRTTMEVGFIVGQYFIY
         . :  .:    . :..:  :.  ::. ..:.:..::: :.: ....:.::. ::. .:
CCDS30 P-QVERALAAVERQMAKISVAED--GRLRIRGALMGTYVASVLCKSVLEAGFLYGQWRLY
               130       140         150       160       170       

         180       190       200       210       220       230     
pF1KB9 GIFLTTLHVCRRSPCPHPVNCYVSRPTEKNVFIVFMLAVAALSLLLSLAELYHLGWKKIR
       :  .  . ::.:.:::. :.:.:::::::..::.:::.:. .::.:.: :: ::   .  
CCDS30 GWTMEPVFVCQRAPCPYLVDCFVSRPTEKTIFIIFMLVVGLISLVLNLLELVHL-LCRCL
       180       190       200       210       220       230       

         240       250       260          270       280       290  
pF1KB9 QRFVKPRQHMAKCQLSGPSVGIVQSCTPPPD---FNQCLENGPGGKFFNPFSNNMASQQN
       .: .. ::     : . :. :   :  :  :   :   . .::..     ...  .:.::
CCDS30 SRGMRARQG----QDAPPTQGT--SSDPYTDQVFFYLPVGQGPSSPPCPTYNGLSSSEQN
        240           250         260       270       280       290

            300       310       320       330       340       350  
pF1KB9 TDNLVTEQVRGQEQTPGEGFIQVRYGQKPEVPNGVSPGHRLPHGYHSDKRRLSKASSKAR
         ::.::.  .. . :       . ::::                               
CCDS30 WANLTTEERLASSRPPLFLDPPPQNGQKPPSRPSSSASKKQYV                 
              300       310       320       330                    

>>CCDS5025.1 GJA10 gene_id:84694|Hs108|chr6               (543 aa)
 initn: 917 init1: 558 opt: 916  Z-score: 1064.5  bits: 206.1 E(32554): 5.7e-53
Smith-Waterman score: 916; 44.4% identity (69.1% similar) in 324 aa overlap (1-320:1-320)

               10        20        30        40        50        60
pF1KB9 MGDWSFLGNFLEEVHKHSTVVGKVWLTVLFIFRMLVLGTAAESSWGDEQADFRCDTIQPG
       ::::..::..:::::.:::.:::.:::.::::::::: .:::. : :::. : :.: :::
CCDS50 MGDWNLLGGILEEVHSHSTIVGKIWLTILFIFRMLVLRVAAEDVWDDEQSAFACNTRQPG
               10        20        30        40        50        60

               70        80        90       100       110          
pF1KB9 CQNVCYDQAFPISHIRYWVLQIIFVSTPSLVYMGHAMHTVRMQEKRKLREAE--RAKEVR
       :.:.:::.::::: ::.:::::::::.:::::::::.. .:  :: . :.    ::.   
CCDS50 CNNICYDDAFPISLIRFWVLQIIFVSSPSLVYMGHALYRLRAFEKDRQRKKSHLRAQMEN
               70        80        90       100       110       120

      120       130       140         150       160       170      
pF1KB9 GSGSYEYPVAEKAELSCWEEGN--GRIALQGTLLNTYVCSILIRTTMEVGFIVGQYFIYG
        . . :       ::   :: .   .. :.: :: :::  :: :...::::..:::..::
CCDS50 PDLDLEEQQRIDRELRRLEEQKRIHKVPLKGCLLRTYVLHILTRSVLEVGFMIGQYILYG
              130       140       150       160       170       180

        180       190       200       210       220       230      
pF1KB9 IFLTTLHVCRRSPCPHPVNCYVSRPTEKNVFIVFMLAVAALSLLLSLAELYHLGWKKIRQ
       . .  :. : . :::. :.:.:::::::..:..:: ..::.::::.. :..::: .:: .
CCDS50 FQMHPLYKCTQPPCPNAVDCFVSRPTEKTIFMLFMHSIAAISLLLNILEIFHLGIRKIMR
              190       200       210       220       230       240

        240       250       260       270       280       290      
pF1KB9 RFVKPRQHMAKCQLSGPSVGIVQSCTPPPDFNQCLENGPGGKFFNPFSNNMASQQNTDNL
        . :  .  .  . .::   . .  .     .::.  .   . ..:.. :  .:    :.
CCDS50 TLYKKSSSEGIEDETGPPFHLKKYSVA----QQCMICSSLPERISPLQANNQQQVIRVNV
              250       260           270       280       290      

        300       310       320       330       340       350      
pF1KB9 VTEQVRGQEQTPGEGFIQVRYGQKPEVPNGVSPGHRLPHGYHSDKRRLSKASSKARSDDL
          ..  :   : .  ..   :.:                                    
CCDS50 PKSKTMWQIPQPRQLEVDPSNGKKDWSEKDQHSGQLHVHSPCPWAGSAGNQHLGQQSDHS
        300       310       320       330       340       350      

>>CCDS432.1 GJA9 gene_id:81025|Hs108|chr1                 (515 aa)
 initn: 914 init1: 578 opt: 909  Z-score: 1056.7  bits: 204.6 E(32554): 1.6e-52
Smith-Waterman score: 930; 45.7% identity (70.8% similar) in 315 aa overlap (1-295:1-312)

               10        20        30        40        50        60
pF1KB9 MGDWSFLGNFLEEVHKHSTVVGKVWLTVLFIFRMLVLGTAAESSWGDEQADFRCDTIQPG
       ::::..::. ::::: :::..::.:::.::::::::::.:::. :.:::. : :.: :::
CCDS43 MGDWNLLGDTLEEVHIHSTMIGKIWLTILFIFRMLVLGVAAEDVWNDEQSGFICNTEQPG
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB9 CQNVCYDQAFPISHIRYWVLQIIFVSTPSLVYMGHAMHTVRMQEKRKLREAERAKEVRGS
       :.::::::::::: :::::::.::::.:::::::::.. .:. :... :   . .     
CCDS43 CRNVCYDQAFPISLIRYWVLQVIFVSSPSLVYMGHALYRLRVLEEERQRMKAQLRVELEE
               70        80        90       100       110       120

              130          140         150       160       170     
pF1KB9 GSYEYPVAEK---AELSCWEEGN--GRIALQGTLLNTYVCSILIRTTMEVGFIVGQYFIY
         .:.:  ..    :: :  :    ..  :.:::: :::  :. :...::::..:::..:
CCDS43 VEFEMPRDRRRLEQEL-CQLEKRKLNKAPLRGTLLCTYVIHIFTRSVVEVGFMIGQYLLY
              130        140       150       160       170         

         180       190       200       210       220       230     
pF1KB9 GIFLTTLHVCRRSPCPHPVNCYVSRPTEKNVFIVFMLAVAALSLLLSLAELYHLGWKKIR
       :. :  :  :.  :::. ..:.:::::::..:..:: ..:..::.:.. :..:::.:::.
CCDS43 GFHLEPLFKCHGHPCPNIIDCFVSRPTEKTIFLLFMQSIATISLFLNILEIFHLGFKKIK
     180       190       200       210       220       230         

                        240       250       260       270       280
pF1KB9 QRFV---------------KPRQHMAKCQLSGPSVGIVQSCTPPPDFNQCLENGPGGKFF
       . .                : .:..:: : .  :.. ..     ::.:  .:.      .
CCDS43 RGLWGKYKLKKEHNEFHANKAKQNVAKYQST--SANSLKRLPSAPDYNLLVEKQTHTAVY
     240       250       260       270         280       290       

              290       300       310       320       330       340
pF1KB9 NPFSNNMASQQNTDNLVTEQVRGQEQTPGEGFIQVRYGQKPEVPNGVSPGHRLPHGYHSD
         .... . : : ::                                             
CCDS43 PSLNSSSVFQPNPDNHSVNDEKCILDEQETVLSNEISTLSTSCSHFQHISSNNNKDTHKI
       300       310       320       330       340       350       

>>CCDS5123.1 GJA1 gene_id:2697|Hs108|chr6                 (382 aa)
 initn: 938 init1: 538 opt: 883  Z-score: 1028.2  bits: 198.9 E(32554): 6e-51
Smith-Waterman score: 921; 40.6% identity (69.9% similar) in 389 aa overlap (1-358:1-382)

               10        20        30        40        50        60
pF1KB9 MGDWSFLGNFLEEVHKHSTVVGKVWLTVLFIFRMLVLGTAAESSWGDEQADFRCDTIQPG
       ::::: ::..:..:. .::. :::::.::::::.:.::::.::.:::::. :::.: :::
CCDS51 MGDWSALGKLLDKVQAYSTAGGKVWLSVLFIFRILLLGTAVESAWGDEQSAFRCNTQQPG
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB9 CQNVCYDQAFPISHIRYWVLQIIFVSTPSLVYMGHAMHTVRMQEKRKLREAERAKEVRGS
       :.:::::..:::::.:.:::::::::.:.:.:..:.....: .:: . .: :. : .. .
CCDS51 CENVCYDKSFPISHVRFWVLQIIFVSVPTLLYLAHVFYVMRKEEKLNKKE-EELKVAQTD
               70        80        90       100       110          

              130          140       150       160       170       
pF1KB9 GSYEYPVAEKAELSCWEEG---NGRIALQGTLLNTYVCSILIRTTMEVGFIVGQYFIYGI
       :       .. :.. .. :   .:.. ..: :: ::. :::... .::.:.. :..:::.
CCDS51 GVNVDMHLKQIEIKKFKYGIEEHGKVKMRGGLLRTYIISILFKSIFEVAFLLIQWYIYGF
     120       130       140       150       160       170         

       180       190       200       210       220       230       
pF1KB9 FLTTLHVCRRSPCPHPVNCYVSRPTEKNVFIVFMLAVAALSLLLSLAELYHLGWKKIRQR
        :.....:.:.:::: :.:..::::::..::.:::.:. .:: :.. ::... .: ...:
CCDS51 SLSAVYTCKRDPCPHQVDCFLSRPTEKTIFIIFMLVVSLVSLALNIIELFYVFFKGVKDR
     180       190       200       210       220       230         

       240          250             260       270       280        
pF1KB9 FVKPRQ---HMAKCQLS------GPSVGIVQSCTPPPDFNQCLENGPGGKFFNPFSNN--
        :: ..   : ..  ::      . . .  ..:. :    . . . :: :. .   ::  
CCDS51 -VKGKSDPYHATSGALSPAKDCGSQKYAYFNGCSSPTAPLSPM-SPPGYKLVTGDRNNSS
      240       250       260       270       280        290       

              290       300        310       320             330   
pF1KB9 ------MASQQNTDNLVTEQVR-GQEQTPGEGFIQVRYGQKPEVPNG------VSPGHRL
             .::.::  :  .:: : ::  .     :.  ..:  . :.       .. ::.:
CCDS51 CRNYNKQASEQNWANYSAEQNRMGQAGST----ISNSHAQPFDFPDDNQNSKKLAAGHEL
       300       310       320           330       340       350   

           340       350            
pF1KB9 PHGYHSDKRRLSKASSKA----RSDDLSV
             :.:  :.:::.:    : ::: .
CCDS51 QPLAIVDQRPSSRASSRASSRPRPDDLEI
           360       370       380  

>>CCDS9290.1 GJB2 gene_id:2706|Hs108|chr13                (226 aa)
 initn: 648 init1: 453 opt: 471  Z-score: 552.6  bits: 110.1 E(32554): 1.8e-24
Smith-Waterman score: 680; 45.2% identity (71.0% similar) in 241 aa overlap (3-241:2-225)

               10        20        30        40        50        60
pF1KB9 MGDWSFLGNFLEEVHKHSTVVGKVWLTVLFIFRMLVLGTAAESSWGDEQADFRCDTIQPG
         ::. : ..:  :.:::: .::.:::::::::...: .::.  :::::::: :.:.:::
CCDS92  MDWGTLQTILGGVNKHSTSIGKIWLTVLFIFRIMILVVAAKEVWGDEQADFVCNTLQPG
                10        20        30        40        50         

               70        80        90       100        110         
pF1KB9 CQNVCYDQAFPISHIRYWVLQIIFVSTPSLVYMGHAMHTV-RMQEKRKLREAERAKEVRG
       :.:::::. ::::::: :.::.::::::.:.    :::.. : .::..       : ..:
CCDS92 CKNVCYDHYFPISHIRLWALQLIFVSTPALLV---AMHVAYRRHEKKR-------KFIKG
      60        70        80        90          100                

     120       130       140       150       160       170         
pF1KB9 SGSYEYPVAEKAELSCWEEGNGRIALQGTLLNTYVCSILIRTTMEVGFIVGQYFIY-GIF
         . :.   :. . .       .. ..:.:  ::. ::..:. .:..:.   : .: :. 
CCDS92 EIKSEFKDIEEIKTQ-------KVRIEGSLWWTYTSSIFFRVIFEAAFMYVFYVMYDGFS
     110       120              130       140       150       160  

      180       190       200       210       220       230        
pF1KB9 LTTLHVCRRSPCPHPVNCYVSRPTEKNVFIVFMLAVAALSLLLSLAELYHLGWKKIRQRF
       .  :  :   :::. :.:.:::::::.:: :::.::... .::...:: .:  .    . 
CCDS92 MQRLVKCNAWPCPNTVDCFVSRPTEKTVFTVFMIAVSGICILLNVTELCYLLIRYCSGKS
            170       180       190       200       210       220  

      240       250       260       270       280       290        
pF1KB9 VKPRQHMAKCQLSGPSVGIVQSCTPPPDFNQCLENGPGGKFFNPFSNNMASQQNTDNLVT
        ::                                                         
CCDS92 KKPV                                                        
                                                                   

>>CCDS9291.1 GJB6 gene_id:10804|Hs108|chr13               (261 aa)
 initn: 643 init1: 442 opt: 466  Z-score: 546.0  bits: 109.1 E(32554): 4.3e-24
Smith-Waterman score: 661; 40.9% identity (69.1% similar) in 259 aa overlap (3-260:2-239)

               10        20        30        40        50        60
pF1KB9 MGDWSFLGNFLEEVHKHSTVVGKVWLTVLFIFRMLVLGTAAESSWGDEQADFRCDTIQPG
         ::. : .:.  :.:::: .::::.::.::::...: .::.  ::::: :: :.:.:::
CCDS92  MDWGTLHTFIGGVNKHSTSIGKVWITVIFIFRVMILVVAAQEVWGDEQEDFVCNTLQPG
                10        20        30        40        50         

               70        80        90       100       110       120
pF1KB9 CQNVCYDQAFPISHIRYWVLQIIFVSTPSLVYMGHAMHTVRMQEKRKLREAERAKEVRGS
       :.:::::. ::.:::: :.::.::::::.:.   :. .  : .  ::.:..:. .. .  
CCDS92 CKNVCYDHFFPVSHIRLWALQLIFVSTPALLVAMHVAY-YRHETTRKFRRGEKRNDFK--
      60        70        80        90        100       110        

              130       140       150       160       170          
pF1KB9 GSYEYPVAEKAELSCWEEGNGRIALQGTLLNTYVCSILIRTTMEVGFIVGQYFIY-GIFL
          .    .:           .. ..:.:  ::. ::..:  .:..:.   ::.: :  :
CCDS92 ---DIEDIKKQ----------KVRIEGSLWWTYTSSIFFRIIFEAAFMYVFYFLYNGYHL
           120                 130       140       150       160   

     180       190       200       210       220       230         
pF1KB9 TTLHVCRRSPCPHPVNCYVSRPTEKNVFIVFMLAVAALSLLLSLAELYHLGWKKIRQRFV
         .  :  .:::. :.:..::::::.:: .::...... .::..::: .:   :.  :  
CCDS92 PWVLKCGIDPCPNLVDCFISRPTEKTVFTIFMISASVICMLLNVAELCYL-LLKVCFR--
           170       180       190       200       210        220  

     240       250       260       270       280       290         
pF1KB9 KPRQHMAKCQLSGPSVGIVQSCTPPPDFNQCLENGPGGKFFNPFSNNMASQQNTDNLVTE
         :.. :. : . :. .. .:                                       
CCDS92 --RSKRAQTQKNHPNHALKESKQNEMNELISDSGQNAITGFPS                 
                230       240       250       260                  

>>CCDS11487.1 GJC1 gene_id:10052|Hs108|chr17              (396 aa)
 initn: 759 init1: 436 opt: 449  Z-score: 523.8  bits: 105.6 E(32554): 7.4e-23
Smith-Waterman score: 779; 36.0% identity (64.8% similar) in 386 aa overlap (4-354:3-379)

               10        20        30        40        50        60
pF1KB9 MGDWSFLGNFLEEVHKHSTVVGKVWLTVLFIFRMLVLGTAAESSWGDEQADFRCDTIQPG
          ::::  .:::.:.::: :::.:::::..::... ....:: . :::. : :.: :::
CCDS11  MSWSFLTRLLEEIHNHSTFVGKIWLTVLIVFRIVLTAVGGESIYYDEQSKFVCNTEQPG
                10        20        30        40        50         

               70        80        90       100        110         
pF1KB9 CQNVCYDQAFPISHIRYWVLQIIFVSTPSLVYMGHAMHTV-RMQEKRKLREAERAK----
       :.:::::   :.::.:.::.:::.:.:::..:.:.:.: . .:.. .  ..: :.:    
CCDS11 CENVCYDAFAPLSHVRFWVFQIILVATPSVMYLGYAIHKIAKMEHGEADKKAARSKPYAM
      60        70        80        90       100       110         

                 120                    130       140       150    
pF1KB9 --------EVRGSGSYEYPVA-------------EKAELSCWEEGNGRIALQGTLLNTYV
               :     . : :.              :... .  ..:  ::  .: :.. ::
CCDS11 RWKQHRALEETEEDNEEDPMMYPEMELESDKENKEQSQPKPKHDGRRRIREDG-LMKIYV
     120       130       140       150       160       170         

          160       170       180       190       200       210    
pF1KB9 CSILIRTTMEVGFIVGQYFIYGIFLTTLHVCRRSPCPHPVNCYVSRPTEKNVFIVFMLAV
        ..: ::..::::..::::.::. .  ..:: : :::: ..:..::::::..:...: .:
CCDS11 LQLLARTVFEVGFLIGQYFLYGFQVHPFYVCSRLPCPHKIDCFISRPTEKTIFLLIMYGV
      180       190       200       210       220       230        

          220       230       240       250       260         270  
pF1KB9 AALSLLLSLAELYHLGWKKIRQRFVKPRQHMAKCQLSGPSVGIVQSCTP--PPDFNQCLE
       ..: :::.. :. :::.  ::. . . :...   .  :         ::  :: .:  ..
CCDS11 TGLCLLLNIWEMLHLGFGTIRDSLNSKRREL---EDPGAYNYPFTWNTPSAPPGYNIAVK
      240       250       260          270       280       290     

            280        290       300         310           320     
pF1KB9 NGPGGKFFNPFSN-NMASQQNTDNLVTEQVRG--QEQTPGEGFI---QVRYGQ-KPEVPN
         :    .. .:: ..: .::  : . ::  :  .:. :..      ..:..: . ..  
CCDS11 --PDQIQYTELSNAKIAYKQNKANTAQEQQYGSHEENLPADLEALQREIRMAQERLDLAV
           300       310       320       330       340       350   

         330       340       350                     
pF1KB9 GVSPGHRLPHGYHSDKRRLSKASSKARSDDLSV             
        .   .  :::    ... .:..::: :.                 
CCDS11 QAYSHQNNPHG---PREKKAKVGSKAGSNKSTASSKSGDGKTSVWI
           360          370       380       390      




358 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 19:39:36 2016 done: Fri Nov  4 19:39:36 2016
 Total Scan time:  2.770 Total Display time:  0.030

Function used was FASTA [36.3.4 Apr, 2011]
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