GENSCAN 1.0	Date run:  4-Nov-116	Time: 19:29:40

Sequence gi568815585r:80236761_80437705 : 200945 bp : 39.69% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   2380   2548  169  1  1   55   60    82 0.215   1.13
 1.02 Term +   5621   5773  153  1  0   14   38   265 0.464  11.04
 1.03 PlyA +   5824   5829    6                               1.05

 2.00 Prom +   5867   5906   40                              -6.55
 2.01 Init +  12128  12188   61  1  1   54   94    61 0.455   4.77
 2.02 Intr +  26359  26460  102  2  0   62  103    79 0.256   6.03
 2.03 Intr +  29625  29759  135  1  0   20   92    81 0.084   1.32
 2.04 Term +  37263  37390  128  1  2   65   49    64 0.062  -2.34
 2.05 PlyA +  37447  37452    6                               1.05

 3.00 Prom +  50763  50802   40                              -2.35
 3.01 Init +  82450  82513   64  0  1   52  107    51 0.949   4.76
 3.02 Intr +  83207  83402  196  0  1   58   90   102 0.424   4.95
 3.03 Intr +  93650  93688   39  2  0  120   94    16 0.238   1.82
 3.04 Term +  95747  95819   73  2  1  104   36    51 0.300  -2.10
 3.05 PlyA +  96388  96393    6                               1.05

 4.02 PlyA -  98778  98773    6                               1.05
 4.01 Sngl - 100945  99998  948  1  0   58   39   595 0.948  47.91
 4.00 Prom - 101462 101423   40                             -12.91

 5.00 Prom + 101946 101985   40                              -8.85
 5.01 Init + 102217 102287   71  0  2   53   83   119 0.747   6.47
 5.02 Intr + 102361 102581  221  1  2   31  -73   225 0.304  -2.28
 5.03 Intr + 104349 104611  263  1  2   45  -12   236 0.631   5.58
 5.04 Intr + 106032 106108   77  2  2   98  100   116 0.980  11.19
 5.05 Term + 118968 119280  313  0  1   61   36   233 0.160   8.89
 5.06 PlyA + 119565 119570    6                               1.05

 6.00 Prom + 124762 124801   40                              -5.45
 6.01 Init + 158584 158644   61  0  1   76   75    52 0.876   4.16
 6.02 Intr + 162078 162281  204  1  0   36   28   174 0.502   4.45
 6.03 Term + 162992 163134  143  0  2   36   28   170 0.902   2.91
 6.04 PlyA + 163422 163427    6                               1.05

 7.03 PlyA - 164747 164742    6                               1.05
 7.02 Term - 167934 167647  288  0  0   47   48   175 0.548   3.79
 7.01 Init - 170078 169770  309  2  0   62    6   152 0.445   1.76
 7.00 Prom - 176881 176842   40                              -0.65

 8.03 PlyA - 176909 176904    6                               1.05
 8.02 Term - 198169 198061  109  0  1   76   42   118 0.919   3.00
 8.01 Init - 198875 198664  212  2  2   77   69    62 0.474   1.50

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815585r:80236761_80437705|GENSCAN_predicted_peptide_1|107_aa
XGLNQSPSHLKQLYWGYFKDCWGITLLPPPNFFLVPPVGGTQPEARGHESLLVEFREPQA
GPAGDIPEEVFIITRDDSYMYVIAPEDPPVDQDVKVEDSDIDDPDPV

>gi568815585r:80236761_80437705|GENSCAN_predicted_CDS_1|324_bp
nngggactcaaccagtcccccagccatcttaaacaactttactggggatatttcaaggat
tgttggggtatcactctccttccaccccctaatttcttcctggtgcctcctgttggtgga
acacagccagaagccagagggcatgaaagtctgctggtggagttcagggagcctcaggca
ggtcccgcaggagatattccagaagaagtcttcatcatcacaagagatgacagttacatg
tatgttattgcccctgaagatcctccagtggatcaagatgtgaaggtggaagacagtgat
attgatgatcctgaccctgtgtag

>gi568815585r:80236761_80437705|GENSCAN_predicted_peptide_2|141_aa
MTATLADILTATPTLTQNQLGRNGLLGDPGSSQGLSAASSTSIFRSALQIDSAPESHKQS
MRKPASHILGNSGMIVIPIANLICVESGILLFFKFAFKNNLSITGSLRIYLEKNSELGQG
LASPFTMAKHDTAKRKGSNSS

>gi568815585r:80236761_80437705|GENSCAN_predicted_CDS_2|426_bp
atgactgcaaccctagctgatattttgactgctaccccgaccctaactcagaaccaactg
ggcaggaatggcctgctaggggacccagggagctcccagggcctttctgctgcttcttct
acatctatatttcgttcagctctccaaattgactcagctccagagtcccataagcagtca
atgagaaaacctgcttcccacatccttggcaactctggtatgattgtcattcccattgcc
aatctgatctgtgtggaaagtggcatcctgcttttctttaaatttgcatttaaaaataat
ctgagtataacaggttcattgcgaatttatctggagaaaaatagtgaattaggccagggt
ctagccagtccctttacaatggcaaaacatgatactgcaaagagaaaaggttctaactct
tcctag

>gi568815585r:80236761_80437705|GENSCAN_predicted_peptide_3|123_aa
MIQVPHPNDNESSTLEKKGGRGLSHHARHLPSFKGRIKVYQVNGCGMRVKEGEFPGKDNS
IVKDMWRKGTRLKLRKETGGRAAVVSGFRSKLKLWVNGKRQSPEQATTWQKFGRALKSPP
QNT

>gi568815585r:80236761_80437705|GENSCAN_predicted_CDS_3|372_bp
atgatacaggtgccccacccaaatgacaatgaatccagtactttagagaagaaaggaggg
agaggcttgagccaccatgcccggcatttaccgagttttaaaggaagaataaaagtttat
caggtgaatggatgtgggatgagggttaaggaaggggagtttccaggtaaagacaacagt
attgtgaaggacatgtggaggaaagggacgagactgaagctaagaaaagagacaggaggc
agagcagctgtggtgagcgggttcagaagcaagctaaaactatgggttaatggcaaaaga
caatccccagagcaagctacaacatggcagaaatttggcagggccttaaaatctcctcct
caaaacacataa

>gi568815585r:80236761_80437705|GENSCAN_predicted_peptide_4|315_aa
MEARAQSGNGSQPLLQTPRDGGRQRGEPDPRDALTQQVHVLSLDQIRAIRNTNEYTEGPT
VVPRPGLKPAPRPSTQHKHERLHGLPEHRQPPRLQHSQVHSSARAPLSRSISTVSSGSRS
STRTSTSSSSSEQRLLGSSFSSGPVADGIIRVQPKSELKPGELKPLSKEDLGLHAYRCED
CGKCKCKECTYPRPLPSDWICDKQCLCSAQNVIDYGTCVCCVKGLFYHCSNDDEDNCADN
PCSCSQSHCCTRWSAMGVMSLFLPCLWCYLPAKGCLKLCQGCYDRVNRPGCRCKNSNTVC
CKVPTVPPRNFEKPT

>gi568815585r:80236761_80437705|GENSCAN_predicted_CDS_4|948_bp
atggaggccagagctcagagtggcaacgggtcgcagcccttgctgcagacgccccgtgac
ggtggcagacagcgtggggagcccgaccccagagacgccctcacccagcaggtacatgtc
ttgtctctggatcagatcagagccatccgaaacaccaatgagtacacagaggggcctact
gtcgtcccaagacctgggctcaagcctgctcctcgcccctccactcagcacaaacacgag
agactccacggtctgcctgagcaccgccagcctcctaggctccagcactcgcaggtccat
tcttctgcacgagcccctctgtccagatccataagcacggtcagctcagggtcgcggagc
agtacgaggacaagtaccagcagcagctcctctgaacagagactgctaggatcatccttc
tcctccgggcctgttgctgatggcataatccgggtgcaacccaaatctgagctcaagcca
ggtgagcttaagccactgagcaaggaagatttgggcctgcacgcctacaggtgtgaggac
tgtggcaagtgcaaatgtaaggagtgcacctacccaaggcctctgccatcagactggatc
tgcgacaagcagtgcctttgctcggcccagaacgtgattgactatgggacttgtgtatgc
tgtgtgaaaggtctcttctatcactgttctaatgatgatgaggacaactgtgctgacaac
ccatgttcttgcagccagtctcactgttgtacacgatggtcagccatgggtgtcatgtcc
ctctttttgccttgtttatggtgttaccttccagccaagggttgccttaaattgtgccag
gggtgttatgaccgggttaacaggcctggttgccgctgtaaaaactcaaacacagtttgc
tgcaaagttcccactgtcccccctaggaactttgaaaaaccaacatag

>gi568815585r:80236761_80437705|GENSCAN_predicted_peptide_5|314_aa
MGQAAPLLTIPRLRQAGAAGASEGELPSSPKEPLRPQAEVTPPTARLSAKPLGHPAQVSH
PDTASTKALPETRSQDAQVQPTHTRRLHAALTEGGIASLGGADWALWRRGSEAEAGAVGA
EEEEEEEEEEEEGLGPARGGLAVGLRPRLSGGGRELCGGRGSSKWRHVDPRRNRAVVVPE
DISHPGFGTRDGKGSGMRYFRALAYVPRPLSASPPALRSISPRALAAFLWGRARDLQPAM
PKPPTPSVGSCAARASSIPALRRPVPATTQGLRSAGTRRRTGRQLHLQARCGIHWVKPAG
LLSLGEPLSLAQGL

>gi568815585r:80236761_80437705|GENSCAN_predicted_CDS_5|945_bp
atgggccaggctgcccccctgcttacgatccccagactcagacaggcgggggccgcgggc
gcctccgaaggagaactgccttccagccccaaggagccactccgcccccaggcagaggtc
acgccgcccactgccaggctttctgcaaagcccctcggacatccggcacaggtttcccac
cccgacactgcgagcacgaaagccctgcctgagacacgcagccaggacgcacaagtccaa
cccacgcacacacggcgactccacgctgcactgaccgaagggggcattgcctctctcggc
ggtgcagactgggcgttgtggaggcgaggcagcgaggccgaggcgggggcggtgggtgcg
gaggaggaggaagaggaggaggaggaggaggaggagggtctggggcccgcccgggggggg
ctcgccgttggcctgcgccctcgcctttccggaggaggcagggagctctgcggcggccgc
ggcagcagtaaatggcgtcatgtggatccgaggcggaacagagcagttgttgtcccagag
gatatatcgcatccgggatttggaaccagagatggcaagggaagtggcatgcgttatttc
cgggcgctggcctacgtcccccgacccctaagtgccagcccaccagcgctgcgctcgatt
tctccccgggccttagctgccttcctgtggggcagggctcgggacctgcagcccgccatg
cctaagcctcccaccccctccgtgggctcctgtgcggcccgagcctcctccatccctgct
ctgaggcgcccagtcccagcgaccacccaagggctgaggagtgcaggcacacggcgcagg
actggcaggcagctccacctgcaggcccggtgtgggatccactgggtgaagccagctggg
ctcctgagtcttggagaacctttaagtctagctcagggattgtaa

>gi568815585r:80236761_80437705|GENSCAN_predicted_peptide_6|135_aa
MAPRNIHFLISRTCKCYTAKGKQEGGLDRGTSNNEGTPPPGHNSVSGVSFWRHVDSLSPG
TPGSAGLDLPVRERVTLIGGNKLTKIPTGVYDHGIGDWRDPCNPTVGLVPPVRAECKDRT
NQQLKPAHFAITFLN

>gi568815585r:80236761_80437705|GENSCAN_predicted_CDS_6|408_bp
atggccccccgaaatatccacttcctcatctccagaacctgcaaatgttatacggcaaaa
gggaaacaagaagggggcctggaccggggcacctcaaacaatgagggcactcctcctcca
ggccacaactccgtttcaggggtgagtttctggaggcacgtcgattccctctccccggga
acacctggaagcgcgggattagatctcccagtcagagaacgggttacgttaattggagga
aacaaactcactaagattcccactggtgtgtacgaccatggaataggagactggagggac
ccatgcaacccaactgtgggcctggttcccccagtacgagctgaatgcaaagacagaacg
aaccagcaattgaagcctgcacattttgcaattacctttctcaattaa

>gi568815585r:80236761_80437705|GENSCAN_predicted_peptide_7|198_aa
MRKNQHKNFGNSNGHSVVCPQNDHTSSPTRVLNQAELAGKTKIEFRMWIGRKIIEIQENG
KIQSRETENQNKIQELKDETASIKKNLMNLAELNNTRISMQSQVNDEIKAEFKKLFEMNE
NKDTTYQTLWDTAKAVLRGKFIALNTHIKKLERPQINNLTLKLKEFKKQEQINPKASRRQ
EITKIRAELKEIGMLKTI

>gi568815585r:80236761_80437705|GENSCAN_predicted_CDS_7|597_bp
atgagaaagaaccaacacaagaactttggaaactcaaatggccacagtgtcgtatgtcct
caaaatgatcacaccagttctccaacaagagttcttaaccaggctgagctggctggaaag
acaaaaatagaattcagaatgtggataggaaggaagatcattgagattcaggagaatggc
aaaatccaatccagggaaactgagaaccaaaataaaatacaggagctaaaggatgaaaca
gccagcataaaaaagaacctaatgaatctggcagagctgaataatacaaggatttccatg
caatcacaagtaaatgatgaaattaaggcagaattcaagaagttatttgaaatgaatgag
aacaaagatacaacataccagactctctgggacacagctaaggcagtgttaagagggaaa
ttcatagcactaaatacccacatcaaaaagttagaaagacctcaaattaacaacctaaca
ttgaaactgaaagaattcaagaagcaagagcaaatcaaccccaaagctagcagaagacaa
gaaataaccaaaatcagagctgaactgaaggaaattgggatgctaaaaaccatttga

>gi568815585r:80236761_80437705|GENSCAN_predicted_peptide_8|106_aa
MRHQSNTFKMYIGSVQKVRTIQSRCFQVIGRFKNFLIGNLVERVAINIKKCLGYDKRLWR
PKFYQANEASRDKDEAGNHSQQTNTGTENQTPRVLTHKWELNDENA

>gi568815585r:80236761_80437705|GENSCAN_predicted_CDS_8|321_bp
atgagacatcagtcaaatacatttaagatgtacattggttcggtccagaaagtcagaaca
attcaaagcaggtgcttccaggttataggtagatttaaaaattttctgattggcaatttg
gttgaaagagttgccatcaatataaagaaatgtctgggatatgacaagaggttgtggaga
ccaaagttttatcaggcaaatgaagcctccagggacaaggatgaagctggaaatcattct
cagcaaactaacacaggaacagaaaaccaaacaccacgtgttctcactcataagtgggag
ctgaacgatgagaatgcatag