GENSCAN 1.0	Date run:  4-Nov-116	Time: 19:28:29

Sequence gi568815591r:44784413_44985266 : 200854 bp : 46.72% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +  11237  11285   49  1  1   69   80    63 0.524   2.72
 1.02 Intr +  12278  12436  159  0  0   40   47   173 0.439   8.36
 1.03 Intr +  14980  15068   89  2  2   61   96    46 0.944   2.39
 1.04 Intr +  15290  15462  173  1  2   70   79   196 0.999  15.64
 1.05 Term +  16875  17010  136  0  1   82   38   226 0.997  14.49
 1.06 PlyA +  17198  17203    6                               1.05

 2.00 Prom +  24962  25001   40                              -3.36
 2.01 Init +  37591  37646   56  0  2   32   86    54 0.162   0.36
 2.02 Intr +  38860  38963  104  1  2   94   63    40 0.253   1.92
 2.03 Intr +  61779  61859   81  1  0  104  119    10 0.038   5.31
 2.04 Term +  63523  63998  476  2  2   95   38   185 0.041   9.25
 2.05 PlyA +  64808  64813    6                               1.05

 3.02 PlyA -  65030  65025    6                               1.05
 3.01 Sngl - 100936  99998  939  1  0   76   47  2062 0.959 197.41
 3.00 Prom - 103143 103104   40                              -3.06

 4.07 PlyA - 103340 103335    6                               1.05
 4.06 Term - 103596 103539   58  2  1  100   46    67 0.193   0.86
 4.05 Intr - 108235 108130  106  2  1   49   84    83 0.156   3.27
 4.04 Intr - 109050 108995   56  2  2  119   58    27 0.115   1.42
 4.03 Intr - 137777 137674  104  2  2   45   81    62 0.022   0.17
 4.02 Intr - 151365 151171  195  0  0   48   80   161 0.620  10.91
 4.01 Init - 153144 153031  114  0  0   76   83    33 0.439   1.83
 4.00 Prom - 166491 166452   40                              -3.16

 5.22 PlyA - 166588 166583    6                               1.05
 5.21 Term - 178483 178327  157  0  1  112   53   222 0.999  18.51
 5.20 Intr - 178712 178558  155  2  2   87   84   224 0.999  20.77
 5.19 Intr - 179750 179637  114  2  0   90   89   253 0.984  26.24
 5.18 Intr - 180107 180003  105  2  0  103   72    91 0.674   9.41
 5.17 Intr - 180677 180533  145  1  1   91   84   209 0.998  21.08
 5.16 Intr - 181448 181225  224  2  2   65   79   165 0.994  10.23
 5.15 Intr - 181943 181661  283  1  1  102  100   300 0.521  30.02
 5.14 Intr - 182426 182260  167  2  2  112   84   236 0.983  24.36
 5.13 Intr - 183325 183193  133  0  1   47   95   175 0.975  14.75
 5.12 Intr - 183546 183472   75  2  0   90   99   207 0.999  20.63
 5.11 Intr - 185058 185001   58  1  1   89   85    87 0.777   6.44
 5.10 Intr - 185463 185256  208  0  1   74   48   354 0.739  28.65
 5.09 Intr - 185742 185628  115  2  1   59   49   287 0.999  22.35
 5.08 Intr - 186325 186180  146  1  2   40   94   289 0.999  23.78
 5.07 Intr - 186647 186423  225  2  0   61   75   317 0.999  25.88
 5.06 Intr - 187377 187261  117  0  0   71   93   175 0.999  16.96
 5.05 Intr - 190815 190762   54  0  0  106   82    78 0.981   8.18
 5.04 Intr - 191237 191072  166  1  1   78   86   357 0.998  34.46
 5.03 Intr - 192245 192152   94  0  1   96  105    97 0.999  11.22
 5.02 Intr - 192659 192451  209  1  2   81   82   507 0.999  48.12
 5.01 Init - 194549 194455   95  2  2   94   96   196 0.999  20.85

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl +  63558  63998  441  2  0   49   38   268 0.955  12.16


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815591r:44784413_44985266|GENSCAN_predicted_peptide_1|201_aa
MKRSSPALASAPPKAPDATAEENRVLLAMVNPTVFFDIAVDGEPLGRVSFEVGRAAACGN
GAQKVGRGRENFRALSTGEKGFGYKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFE
DENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMER
FGSRNGKTSKKITIADCGQLE

>gi568815591r:44784413_44985266|GENSCAN_predicted_CDS_1|606_bp
atgaagcgatcctccccggccttggcctccgcgcctcctaaagcgccagacgccaccgcc
gaggaaaaccgtgtactattagccatggtcaaccccaccgtgttcttcgacattgccgtc
gacggcgagcccttgggccgcgtctcctttgaggtcgggcgggcggcggcgtgcgggaat
ggggcccagaaagtgggccggggtcgggaaaattttcgtgctctgagcactggagagaaa
ggatttggttataagggttcctgctttcacagaattattccagggtttatgtgtcagggt
ggtgacttcacacgccataatggcactggtggcaagtccatctatggggagaaatttgaa
gatgagaacttcatcctaaagcatacgggtcctggcatcttgtccatggcaaatgctgga
cccaacacaaatggttcccagtttttcatctgcactgccaagactgagtggttggatggc
aagcatgtggtgtttggcaaagtgaaagaaggcatgaatattgtggaggccatggagcgc
tttgggtccaggaatggcaagaccagcaagaagatcaccattgctgactgtggacaactc
gaataa

>gi568815591r:44784413_44985266|GENSCAN_predicted_peptide_2|238_aa
MHGVRKKPSYNSTKSSMDGLILHPATGLVFVLSKQCEEIHQPVVWTCEQREAESLKSIKN
DNSMSPAFLAYVNTYVFLATGPVPPAHPAALTMFSAPTPPPLGRAPSRCRPAPPPPLSQH
RPPPPEPDNTPCPPRAAVANARLSCWFEPQRLFNRAPPSSQTPPPRHRLPNGCLFLHTAR
GGGASSPNSDALSAFHQAPKPDEQKGKPMRLDASQTKANKNIAREQGRRATGKDSKIS

>gi568815591r:44784413_44985266|GENSCAN_predicted_CDS_2|717_bp
atgcatggagtaagaaagaaaccatcctacaatagcaccaaatccagcatggatggactc
atcctccaccctgctactggacttgtctttgtactctcaaagcagtgtgaggagattcat
caaccggtggtgtggacatgtgaacagcgtgaggcagagagtttaaaatctatcaagaac
gacaactcaatgtctcctgcatttttagcttatgttaatacttatgtatttttagctact
ggccccgtgcccccggcccacccggccgcccttaccatgttctcggcgccgactccgcct
ccgctcggccgcgcgccctcccgctgccgacccgcgccgccgccgccgctctcgcagcac
cgaccgccgccgccggagccggacaataccccgtgcccgcctcgcgctgctgtggccaat
gcccgcttgtcttgctggttcgaaccccagcggctgttcaatcgcgcgcctccttctagc
cagaccccgcccccccggcaccgccttcctaacggctgtttgtttttgcacacggcacgc
ggaggcggggcctccagccccaatagtgacgcgctctctgcctttcaccaggcgcccaag
cctgacgaacagaaaggcaaaccaatgagattggacgcctcgcagacgaaagccaataaa
aatatcgcccgcgagcaagggaggcgggccactgggaaggacagcaaaattagctaa

>gi568815591r:44784413_44985266|GENSCAN_predicted_peptide_3|312_aa
MADGDSGSERGGGGGPCGFQPASRGGGEQETQELASKRLDIQNKRFYLDVKQNAKGRFLK
IAEVGAGGSKSRLTLSMAVAAEFRDSLGDFIEHYAQLGPSSPEQLAAGAEEGGGPRRALK
SEFLVRENRKYYLDLKENQRGRFLRIRQTVNRGGGGFGAGPGPGGLQSGQTIALPAQGLI
EFRDALAKLIDDYGGEDDELAGGPGGGAGGPGGGLYGELPEGTSITVDSKRFFFDVGCNK
YGVFLRVSEVKPSYRNAITVPFKAWGKFGGAFCRYADEMKEIQERQRDKLYERRGGGSGG
GEESEGEEVDED

>gi568815591r:44784413_44985266|GENSCAN_predicted_CDS_3|939_bp
atggcggacggcgacagcggcagcgagcgcggcggcggcggtgggccgtgcgggttccag
cccgcgtcccgcggcggcggcgagcaagagacgcaggagctggcctcgaagcggctggac
atccagaacaagcgcttctacttagatgtgaagcagaacgccaagggccgcttcctcaag
atcgccgaggtgggcgcgggcggttccaagagccgcctcacgctgtccatggcggtggcc
gccgagttccgcgactcgctgggcgacttcatagaacactacgcgcagctgggccctagc
agccccgagcagctggcggctggcgccgaggagggcggcgggccgcggcgcgcgctcaag
agcgaattcttggtgcgtgagaaccgcaagtactacctggacctcaaggagaaccagcgc
ggccgcttcctgcgcatccgccaaacggtcaaccgcggcggtggcggcttcggcgcgggc
cccgggccgggcggcttgcagagcggccagaccatcgcgctgcctgcgcagggcctcatc
gagttccgcgacgcgctggcgaagctcatagacgactacggaggcgaggacgacgagctg
gcaggcggcccgggaggcggcgccgggggcccagggggcggcctgtatggagagctcccg
gagggcacctccatcaccgtggactccaagcgcttcttcttcgatgtgggctgcaacaaa
tacggggtgtttctgcgagtgagcgaggtgaagccgtcctaccgcaatgccatcaccgta
cccttcaaagcctggggcaagttcggaggcgccttttgccggtatgcggatgagatgaaa
gaaatccaggaacgacagagggataagctttatgagcgacgtggtgggggcagcggcggc
ggcgaagagtcagagggtgaggaggtggatgaggattga

>gi568815591r:44784413_44985266|GENSCAN_predicted_peptide_4|210_aa
MGQQVLCSTGYTLCSIILGQRNTRASPVPSEKCKTQIGATAITQFSSPPADSEGTVEAAM
LLQPKDLRQGYPHSGSGIPTYWSISREGTQTQASTILSTSPGWVSQDSATQGVESPCPPP
PPPTICCRPLFHASAIPCIRHNRQRLTHYGKLSQPGQTEMKKHKDEKRNDTNTVMLTFWG
ICVKNTIIAAVLKLMSNPPYLLAAPTPNYY

>gi568815591r:44784413_44985266|GENSCAN_predicted_CDS_4|633_bp
atggggcagcaggtcctctgctccactggctacaccctatgctccatcattttaggccag
agaaacaccagggcctctcctgtgcccagtgagaaatgcaagactcaaatcggagccact
gccatcacccagtttagctcaccacctgcagactcagaggggacagtggaggctgcaatg
ttgctgcaaccaaaggacctgcgccaaggatacccccacagcggtagtgggatccccact
tactggagcatctcccgtgaaggcacacagacccaagcatcaaccatcctcagcaccagc
ccagggtgggtctcacaggactcagcaacccagggcgttgagtccccatgccccccacca
ccacccccaaccatctgctgccggccacttttccatgcttcagccatcccctgcatcagg
cacaacaggcaacgtctcactcactacgggaagttgagccagccaggacagacagagatg
aagaaacataaagatgaaaagcgtaatgacacaaacaccgtgatgttaacattttgggga
atctgtgtgaagaatactattattgcagctgttctgaaactgatgtcaaatccaccctac
ctgctggcagctcccacacctaattactactga

>gi568815591r:44784413_44985266|GENSCAN_predicted_peptide_5|1014_aa
MEDEEGPEYGKPDFVLLDQVTMEDFMRNLQLRFEKGRIYTYIGEVLVSVNPYQELPLYGP
EAIARYQGRELYERPPHLYAVANAAYKAMKHRSRDTCIVISGESGAGKTEASKHIMQYIA
AVTNPSQRAEVERVKDVLLKSTCVLEAFGNARTNRNHNSSRFGKYMDINFDFKGDPIGGH
IHSYLLEKSRVLKQHVGERNFHAFYQALDSDEQSHQAVTEAMRVIGFSPEEVESVHRILA
AILHLGNIEFVETEEGGLQKEGLAVAEEALVDHVAELTATPRDLVLRSLLARTVASGGRE
LIEKGHTAAEASYARDACAKAVYQRLFEWVVNRINSVMEPRGRDPRRDGKDTVIGVLDIY
GFEVFPVNSFEQFCINYCNEKLQQLFIQLILKQEQEEYEREGITWQSVEYFNNATIVDLV
ERPHRGILAVLDEACSSAGTITDRIFLQTLDMHHRHHLHYTSRQVPPAVPVPPQWADKTM
EFGRDFRIKHYAGDVTYSVEGFIDKNRDFLFQDFKRLLYNSTDPTLRAMWPDGQQDITEV
TKRPLTAGTLFKNSMVALVENLASKEPFYVRCIKPNEDKVAGKLDENHCRHQVAYLGLLE
NVRVRRAGFASRQPYSRFLLRCGVGRVGSIISPPGLGHTALSCGDRYKMTCEYTWPNHLL
GSDKAAVSALLEQHGLQGDVAFGHSKLFIRSPRTLVTLEQSRARLIPIIVLLLQKAWRGT
LARWRCRRLRAIYTIMRWFRRHKVRAHLAELQRRFQAARQPPLYGRDLVWPLPPAVLQPF
QDTCHALFCRWRARQLVKNIPPSDMPQIKAKVAAMGALQGLRQDWGCRRAWARDYLSSAT
DNPTASSLFAQRLKTLQDKDGFGAVLFSSHVRKVNRFHKIRNRALLLTDQHLYKLDPDRQ
YRVMRAVPLEAVTGLSVTSGGDQLVVLHARGQDDLVVCLHRSRPPLDNRVGELVGVLAAH
CQGEGRTLEVRVSDCIPLSHRGVRRLISVEPRPEQPEPDFRCARGSFTLLWPSR

>gi568815591r:44784413_44985266|GENSCAN_predicted_CDS_5|3045_bp
atggaggacgaggaaggccctgagtatggcaaacctgactttgtgcttttggaccaagtg
accatggaggacttcatgaggaacctgcagctcaggttcgagaagggccgcatctacacc
tacatcggtgaggtgctggtgtccgtgaacccctaccaggagctgcccctgtatgggcct
gaggccatcgccaggtaccagggccgtgagctctatgagcggccaccccatctctatgct
gtggccaacgccgcctacaaggcaatgaagcaccggtccagggacacctgcatcgtcatc
tcaggggagagtggggcagggaagacagaagccagtaagcacatcatgcagtacatcgct
gctgtcaccaatccaagccagagggctgaggtggagagggtcaaggacgtgctgctcaag
tccacctgtgtgctggaggcctttggcaatgcccgcaccaaccgcaatcacaactccagc
cgctttggcaagtacatggacatcaactttgacttcaagggggacccgatcggaggacac
atccacagctacctactggagaagtctcgggtcctcaagcagcacgtgggtgaaagaaac
ttccacgccttctaccaagccttggacagtgatgagcagagccaccaggcagtgaccgag
gccatgagggtcatcggcttcagtcctgaagaggtggagtctgtgcatcgcatcctggct
gccatattgcacctgggaaacatcgagtttgtggagacggaggagggtgggctgcagaag
gagggcctggcagtggccgaggaggcactggtggaccatgtggctgagctgacggccaca
ccccgggacctcgtgctccgctccctgctggctcgcacagttgcctcgggaggcagggaa
ctcatagagaagggccacactgcagctgaggccagctatgcccgggatgcctgtgccaag
gcagtgtaccagcggctgtttgagtgggtggtgaacaggatcaacagtgtcatggaaccc
cggggccgggatcctcggcgtgatggcaaggacacagtcattggcgtgctggacatctat
ggcttcgaggtgtttcccgtcaacagtttcgagcagttctgcatcaactactgcaacgag
aagctgcagcagctattcatccagctcatcctgaagcaggaacaggaagagtacgagcgc
gagggcatcacctggcagagcgttgagtatttcaacaacgccaccattgtggatctggtg
gagcggccccaccgtggcatcctggccgtgctggacgaggcctgcagctctgctggcacc
atcactgaccgaatcttcctgcagaccctggacatgcaccaccgccatcacctacactac
accagccgccaggtgcccccggctgtcccagtgccaccacagtgggctgacaagaccatg
gagtttggccgagacttccggatcaagcactatgcaggggacgtcacgtactccgtggaa
ggcttcatcgacaagaacagagatttcctcttccaggacttcaagcggctgctgtacaac
agcacggaccccactctacgggccatgtggccggacgggcagcaggacatcacagaggtg
accaagcgccccctgacggctggcacactcttcaagaactccatggtggccctggtggag
aaccttgcctccaaggagcccttctacgtccgctgcatcaagcccaatgaggacaaggta
gctgggaagctggatgagaaccactgtcgccaccaggtcgcatacctggggctgctggag
aatgtgagggtccgcagggctggcttcgcttcccgccagccctactctcgattcctgctc
aggtgtggggtgggcagggtgggctccatcatctctcccccaggcctgggccacactgcc
ctgtcctgtggtgacaggtacaagatgacctgtgaatacacatggcccaaccacctgctg
ggctccgacaaggcagccgtgagcgctctcctggagcagcacgggctgcagggggacgtg
gcctttggccacagcaagctgttcatccgctcaccccggacactggtcacactggagcag
agccgagcccgcctcatccccatcattgtgctgctattgcagaaggcatggcggggcacc
ttggcgaggtggcgctgccggaggctgagggctatctacaccatcatgcgctggttccgg
agacacaaggtgcgggctcacctggctgagctgcagcggcgattccaggctgcaaggcag
ccgccactctacgggcgtgaccttgtgtggccgctgccccctgctgtgctgcagcccttc
caggacacctgccacgcactcttctgcaggtggcgggcccggcagctggtgaagaacatc
cccccttcagacatgccccagatcaaggccaaggtggccgccatgggggccctgcaaggg
cttcgtcaggactggggctgccgacgggcctgggcccgagactacctgtcctctgccact
gacaatcccacagcatcaagcctgtttgctcagcgactaaagacacttcaggacaaagat
ggcttcggggctgtgctcttttcaagccatgtccgcaaggtgaaccgcttccacaagatc
cggaaccgggccctcctgctcacagaccagcacctctacaagctggaccctgaccggcag
taccgggtgatgcgggccgtgccccttgaggcggtgacggggctgagcgtgaccagcgga
ggagaccagctggtggtgctgcacgcccgcggccaggacgacctcgtggtgtgcctgcac
cgctcccggccgccattggacaaccgcgttggggagctggtgggcgtgctggccgcacac
tgccagggggagggccgcaccctggaggttcgcgtctccgactgcatcccactaagccat
cgcggggtccggcgcctcatctccgtggagcccaggccggagcagccagagcccgatttc
cgctgcgctcgcggctccttcaccctgctctggcccagccgctga