GENSCAN 1.0	Date run:  4-Nov-116	Time: 19:05:13

Sequence gi568815597f:33764192_33964749 : 200558 bp : 45.66% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.12 PlyA -    373    368    6                               1.05
 1.11 Term -   2465   2319  147  2  0   37   28   132 0.015   0.00
 1.10 Intr -   7187   7014  174  2  0   43   81    70 0.019   1.94
 1.09 Intr -   8560   8445  116  2  2  115   48    70 0.352   5.87
 1.08 Intr -   9029   8915  115  2  1   65   91    21 0.572   0.12
 1.07 Intr -  10380  10299   82  2  1   64   94    46 0.373   2.44
 1.06 Intr -  28335  28232  104  0  2  140  103   130 0.851  18.67
 1.05 Intr -  46673  46552  122  0  2  101  121   103 0.978  15.11
 1.04 Intr -  55646  55522  125  1  2   77   78   149 0.972  13.03
 1.03 Intr -  56365  56278   88  2  1   94  110    18 0.953   3.63
 1.02 Intr -  61583  61506   78  0  0   79   75   106 0.958   7.92
 1.01 Init -  65779  65674  106  1  1   80   52   114 0.663   5.39
 1.00 Prom -  67309  67270   40                             -11.53

 2.00 Prom +  67776  67815   40                              -4.96
 2.01 Init +  69688  70814 1127  0  2   60   53   391 0.746  26.47
 2.02 Term +  75136  75457  322  1  1   15   37   253 0.482   7.19
 2.03 PlyA +  75500  75505    6                              -0.45

 3.04 PlyA -  75772  75767    6                              -0.45
 3.03 Term -  76018  75993   26  2  2   93   40    40 0.044  -1.91
 3.02 Intr -  82805  82693  113  1  2  133  102   145 0.495  20.42
 3.01 Init -  91124  91054   71  2  2   70   18    65 0.110  -1.78
 3.00 Prom -  92982  92943   40                              -3.56

 4.00 Prom +  98973  99012   40                              -5.86
 4.01 Sngl + 100001 100561  561  1  0   82   45   407 0.845  31.94
 4.02 PlyA + 101726 101731    6                               1.05

 5.00 Prom + 103275 103314   40                              -5.66
 5.01 Init + 103876 103936   61  0  1   77   72    -1 0.610  -1.39
 5.02 Intr + 105012 105239  228  1  0   95   43   113 0.120   5.34
 5.03 Term + 126384 126736  353  1  2   90   41   116 0.089   1.75
 5.04 PlyA + 127874 127879    6                               1.05

 6.07 PlyA - 127924 127919    6                               1.05
 6.06 Term - 128962 128894   69  1  0  118   45    22 0.067  -1.16
 6.05 Intr - 129759 129604  156  0  0   74  115    15 0.049   3.01
 6.04 Intr - 132405 132366   40  2  1   74   94    14 0.002  -1.17
 6.03 Intr - 154110 153903  208  1  1  115  107   299 0.709  32.64
 6.02 Intr - 171763 171569  195  2  0  103   92   183 0.711  19.59
 6.01 Init - 174747 174741    7  0  1   50  108     0 0.140  -0.77
 6.00 Prom - 175594 175555   40                              -3.46

 7.03 PlyA - 177112 177107    6                               1.05
 7.02 Term - 178010 177946   65  0  2  105   45   115 0.971   6.95
 7.01 Init - 178078 178012   67  1  1   87   47     2 0.487  -2.76
 7.00 Prom - 180302 180263   40                              -2.76

 8.00 Prom + 184300 184339   40                              -1.76
 8.01 Init + 190399 190494   96  0  0   66  115    83 0.845   9.11
 8.02 Intr + 198501 198591   91  2  1  100   89    21 0.083   2.97

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term +   7028   7191  164  0  2  108   41   113 0.802   6.70


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597f:33764192_33964749|GENSCAN_predicted_peptide_1|418_aa
MAGAPPPALLLPCSLISDCCASNQRHSVGVGPSELVKKQIELKSRGVKLMPSKDNSQKTS
VLTQVGVSQGHNMCPDPGIPERGKRLGSDFRLGSSVQFTCNEGYDLQGSKRITCMKVSDM
FAAWSDHRPVCRARMCDAHLRGPSGIITSPNFPIQYDNNAHCVWIITALNPSKVIKLAFE
EFDLERGYDTLTVGDGGQDGDQKTVLYMSQNACSDSPHTPGSRIPESMSGDIWRQKWTVL
EICRDISSSDARSGSVRKSPKTSNAVELVAPGTEIEQGSCGDPGIPAYGRREGSRFHHGD
TLKFECQPAFELNIEPNSISHVACWEPQGPGGAGSSSGQANTKALPIAETKPRDRCTGQG
SAEAGPEKIKHTFVDYCEVPKVKCHEFRDELGTVRVLKELFSCGDRHHYINEVGPCGL

>gi568815597f:33764192_33964749|GENSCAN_predicted_CDS_1|1257_bp
atggcgggcgcccctccccccgccttgctgctgccttgcagtttgatctcagactgctgt
gctagcaatcagcgacactccgtgggcgtaggaccctccgagctagtcaagaagcaaatt
gagttgaagtctcgaggtgtgaagctgatgcccagcaaagacaacagccagaagacgtct
gtgttaactcaggttggtgtgtcccaaggacataatatgtgtccagaccctggcataccc
gaaaggggcaaaagactaggctcggatttcaggttaggatccagcgtccagttcacctgc
aacgagggctatgacctgcaagggtccaagcggatcacctgtatgaaagtgagcgacatg
tttgcggcctggagcgaccacaggccagtctgccgagcccgcatgtgtgatgcccacctt
cgaggcccctcgggcatcatcacctcccccaatttccccattcagtatgacaacaatgca
cactgtgtgtggatcatcacagcactcaacccctccaaggtgatcaagctcgcctttgag
gagtttgatttggagaggggctatgacaccctgacggtcggtgatggtggtcaggatggg
gaccagaagacagttctctacatgtctcaaaatgcctgcagtgacagccctcacacccca
ggctctcgcatcccagagagcatgtctggggacatctggaggcagaaatggactgtactt
gagatctgtcgtgacattagcagttcagatgcaaggtcaggttcagtgaggaagtctcca
aagacttctaatgctgtggaacttgttgctcctgggacagagatcgagcagggcagttgc
ggtgaccctggcatacctgcatatggccggagggaaggctcccggtttcaccacggtgac
acactcaagtttgagtgccagcccgcctttgagctgaatatagagcccaacagcattagc
cacgtagcatgctgggagccacaaggacctggaggagcagggagcagctcggggcaggca
aacacaaaggctttgcccattgcagagaccaagcccagggacaggtgcacggggcagggc
tctgcagaagcagggcctgagaagataaagcacacctttgtggactactgtgaagtgccc
aaggttaagtgccacgaattcagagatgaattgggcacggtccgtgtcctcaaggagctc
ttctcatgtggagatagacaccattatataaatgaagtgggcccttgtggcttataa

>gi568815597f:33764192_33964749|GENSCAN_predicted_peptide_2|482_aa
MSELPFTIASKRIKYLGIQLTRDVKELFKENYKPLLNEIKEDTTKWKNIPCSWVGRINIV
KMAILPKVIYRLNAIPMKLPMPFFTELEKTTLKFIWNQKRARIAKSILSQKNKAGGITLP
DFKLHYKATVTKTAWYWYQNRDIDQWNRTEPSEITPHIYNYLIFDKPEKNKQWGKDSLFN
KWCWENWLAICRKLKLDHFLTPYTKINPRWIKDLNVRPKTIKTLEENLGITIQDIGMGKD
FMSKTPKAMATKDKIDKWDLIKLKSFCTAKQTTIRVNRQPTKWEKIFATYSSDKGLISRI
YNELKQIYKKKTNNPIKKWAKDMNRHFSKEDIYAAKKHMKNCSPSLAIREMQIKTTMRYH
LTPVRMAIIKKSGNNRIKVGIWATVVKTPGFGDTERPNKAIAIMAWCLEESLTLKLEDVQ
FHDLGKVGAVIVTKDDAMFLEGKGDKTQTEKNMQEIIEQLDVTISVYEKGKLEEHPAKFW
MQ

>gi568815597f:33764192_33964749|GENSCAN_predicted_CDS_2|1449_bp
atgagtgaactcccattcacaattgcttcaaagagaataaaatacctaggaatccaactt
acaagggatgtgaaggaactcttcaaggagaactacaaaccactgctcaatgaaataaaa
gaggatacaaccaaatggaagaacattccatgctcatgggtaggaagaatcaatatcgtg
aaaatggccatactgcccaaggtaatttatagactcaatgccatccccatgaagctacca
atgcctttcttcacagaattggaaaaaactactttaaagttcatatggaaccaaaaaaga
gcccgcatcgccaaatcaatcctaagccaaaagaacaaagctggaggcatcacgctacct
gacttcaaactacactacaaggctacagtaaccaaaacagcatggtactggtaccaaaac
agagatatagatcaatggaacagaacagagccctcagaaataacgccgcatatctacaac
tatctgatcttcgacaaacctgagaaaaacaagcaatggggaaaggattccctatttaat
aaatggtgctgggaaaactggctagccatatgtagaaagctgaaactggatcacttcctt
acaccttatacaaaaatcaatccaagatggattaaagacttaaacgttagacctaaaacc
ataaaaaccctagaagaaaacctaggcattaccattcaggacataggcatgggcaaggac
ttcatgtctaaaacaccaaaagcaatggcaacaaaagacaaaattgacaaatgggatcta
attaaactaaagagcttctgcacagcaaaacaaactaccatcagagtgaacaggcaacct
acaaaatgggagaaaattttcgcaacctactcatctgacaaagggctaatatccagaatc
tacaatgaactcaaacaaatttacaagaaaaaaacaaacaaccccatcaaaaagtgggca
aaggacatgaacagacacttctcaaaagaagacatttatgcagccaaaaaacacatgaaa
aactgctcaccatcactggccatcagagaaatgcaaatcaaaaccacaatgagataccat
ctcacaccagttagaatggcgatcattaaaaagtcaggaaacaacaggataaaagttggc
atttgggctacagtagtcaaaactccaggctttggtgacacagaaagaccaaacaaagct
attgctataatggcatggtgtttggaagagagcttgaccctaaagcttgaagatgttcag
tttcatgacttaggaaaagttggagcagtcattgtgaccaaagatgatgccatgttcttg
gaaggaaaaggtgacaagactcaaactgagaaaaatatgcaagaaataattgagcagtta
gatgttactattagtgtctatgaaaaaggaaaactagaagaacatccggcaaaattttgg
atgcaatag

>gi568815597f:33764192_33964749|GENSCAN_predicted_peptide_3|69_aa
MTTRIQSAVAYGSYDVHGYPCQELFTGASLPAPVISSKNWLRLHFTSDGNHRQRGFSAQY
QAEFTEVSE

>gi568815597f:33764192_33964749|GENSCAN_predicted_CDS_3|210_bp
atgaccaccaggatccaatcagctgtagcctatgggtcatatgatgtacatggctacccc
tgtcaggagctgttcaccggagccagcctcccagcccccgttatcagcagcaagaactgg
ctgcgactgcacttcacatcggatggcaaccaccggcagcgcggattcagtgcccaatac
caagctgaattcaccgaagttagtgaataa

>gi568815597f:33764192_33964749|GENSCAN_predicted_peptide_4|186_aa
MGKEIQLKPKANVSSYVHFLLNYRNKFKEQQPNTYVGFKEFSRKCSEKWRSISKHEKAKY
EALAKLDKARYQEEMMNYVGKRKKRRKRDPQEPRRPPSSFLLFCQDHYAQLKRENPNWSV
VQVAKATGKMWSTATDLEKHPYEQRVALLRAKYFEELELYRKQCNARKKYRMSARNRCRG
KRVRQS

>gi568815597f:33764192_33964749|GENSCAN_predicted_CDS_4|561_bp
atgggaaaagaaatccagctaaagcctaaggcaaatgtctcttcttacgttcactttttg
ctgaattacagaaacaaattcaaggagcagcagccaaatacctatgttggctttaaagag
ttctctagaaagtgttcggaaaaatggagatccatctcaaagcatgaaaaggccaaatat
gaagccctggccaaactcgacaaagcccgataccaggaagaaatgatgaattatgttggc
aagaggaagaaacggagaaagcgggatccccaggaacccagacggcctccatcatccttc
ctactcttctgccaagaccactatgctcagctgaagagggagaacccgaactggtcggtg
gtgcaggtggccaaggccacagggaagatgtggtcaacagcgacagacctggagaagcac
ccttatgagcaaagagtggctctcctgagagctaagtacttcgaggaacttgaactctac
cgtaaacaatgtaatgccaggaagaagtaccgaatgtcagctagaaaccggtgcagaggg
aaaagagtcaggcagagctga

>gi568815597f:33764192_33964749|GENSCAN_predicted_peptide_5|213_aa
MEREGGKEEEKLGEPGPKIMGSSETIKCQQGDYPSAPLKDCKKEDTKSMAFFPLGKKGDN
EKPPLGIPWSSWKLKTKCGNCESYLWDMFSQEMEEMARIAKSILSQKNKAGGIMLPDFKL
YYKATVTKTAWYWYQNRDIDQWNRTEPSEITLHIYNYLIFDKPEKNKQWGKDSLFNKWYW
ENWLAICRKLKLDPFLTPYTKINSRWIKDLNKR

>gi568815597f:33764192_33964749|GENSCAN_predicted_CDS_5|642_bp
atggagagagagggagggaaggaggaggagaagttgggggagcctggacctaagataatg
gggtcttcagagactatcaagtgccaacaaggggattacccctctgcccctctaaaggat
tgcaagaaagaagacaccaaatccatggcattttttcccttaggaaagaagggagataat
gagaagcctccacttggtattccttggagcagctggaagctaaaaaccaaatgtgggaac
tgtgaatcctatctctgggatatgttttctcaggaaatggaggaaatggcccgcatcgcc
aagtcaatcctaagccaaaagaacaaagctggaggcatcatgctacctgacttcaaacta
tactacaaggctacagtaaccaaaacagcatggtactggtaccaaaacagagatatagat
caatggaacagaacagagccctcagaaataacgctgcatatctacaactatctgattttt
gacaaacctgagaaaaacaagcaatggggaaaggattccctatttaataaatggtactgg
gaaaactggctagccatatgcagaaagctgaaactggatcccttccttacaccttataca
aaaattaattcaagatggattaaagacttaaataaacgttag

>gi568815597f:33764192_33964749|GENSCAN_predicted_peptide_6|224_aa
MPILPSHTCGNPGRLPNGIQQGSTFNLGDKVRYSCNLGFFLEGHAVLTCHAGSENSATWD
FPLPSCRADDACGGTLRGQSGIISSPHFPSEYHNNADCTWTILAELGDTIALVFIDFQLE
DGYDFLEVTGTEGSSLCHHSPSPDEETEAQQAAASEQEDCLKVQYQPPQHPGKRHGCLLA
WQLTIEIWKIRAMKLTLYSHRMIVPGRAVTQMFLVMWELDGCKA

>gi568815597f:33764192_33964749|GENSCAN_predicted_CDS_6|675_bp
atgccaattctccccagccacacatgtgggaacccagggaggctgcccaatggcatccag
cagggttcaaccttcaacctcggtgacaaggtccgctacagctgcaaccttggcttcttc
ctggagggccacgccgtgctcacctgccacgctggctctgagaacagcgccacgtgggac
ttccccctgccttcctgcagagctgatgatgcctgtggtgggaccctgcggggccagagt
ggcatcatctccagcccccacttcccctcggagtaccataacaatgccgactgcacatgg
accatcctggctgagctgggggacaccatcgccctggtgtttattgacttccagctggag
gatggttacgactttctggaagtcactgggacagaaggctcctccctctgccatcattct
ccttcgccagatgaagaaactgaggcacagcaggctgcagccagtgagcaagaggactgc
ctcaaagtccagtatcagccaccccagcatcctggaaaaaggcatggctgcctgctagct
tggcaattaaccattgagatttggaaaatcagggctatgaaacttactttgtatagccac
agaatgattgtaccaggcagagctgtgacccagatgtttctagtgatgtgggaattggat
ggatgcaaagcatga

>gi568815597f:33764192_33964749|GENSCAN_predicted_peptide_7|43_aa
MAYCRQKCGIPDSDVKTCLCPCMSYVALDKCSNISGNYAYLNK

>gi568815597f:33764192_33964749|GENSCAN_predicted_CDS_7|132_bp
atggcctattgcaggcagaaatgtggaatcccagacagtgatgtgaaaacctgcctctgc
ccctgcatgagctacgtggccttggataaatgctccaacatctctggcaactatgcttat
ctcaacaagtga

>gi568815597f:33764192_33964749|GENSCAN_predicted_peptide_8|63_aa
MVHPNDGMLFSLTKDGNSDTYYTAWMNCEDIMLPLPGIIFLPQISKIDSLISFRCVRKCL
LLX

>gi568815597f:33764192_33964749|GENSCAN_predicted_CDS_8|189_bp
atggtacatccgaacgacggaatgttattcagcctgacaaaagacgggaattctgacaca
tactacacagcatggatgaactgtgaggacatcatgctccctctgcctggaataatcttc
ctcccccaaatcagcaagattgactccctcatatccttcaggtgtgtccgcaaatgtctg
ctgctcgnn