GENSCAN 1.0	Date run:  4-Nov-116	Time: 19:04:36

Sequence gi568815574f:3479245_3679799 : 200555 bp : 36.15% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +    349    450  102  0  0   81   75    55 0.598   3.79
 1.02 Intr +  14893  14981   89  0  2   32   92   117 0.150   4.35
 1.03 Intr +  49352  49670  319  2  1   37   81   120 0.002   1.24
 1.04 Intr +  49784  49943  160  1  1   80   56    96 0.278   4.24
 1.05 Term +  74370  74560  191  1  2   41   46   135 0.271   1.23
 1.06 PlyA +  74693  74698    6                               1.05

 2.00 Prom +  80283  80322   40                              -4.65
 2.01 Init + 100001 100447  447  1  0   57  -13   564 0.782  37.21
 2.02 Term + 100492 100725  234  0  0   36   38   391 0.855  24.24
 2.03 PlyA + 102103 102108    6                               1.05

 3.02 PlyA - 102609 102604    6                               1.05
 3.01 Sngl - 104245 104048  198  1  0   87   33   241 0.807  13.42
 3.00 Prom - 104304 104265   40                              -9.65

 4.05 PlyA - 104342 104337    6                               1.05
 4.04 Term - 104641 104424  218  2  2   14   42   172 0.429   1.52
 4.03 Intr - 104916 104755  162  1  0   33   65   145 0.202   5.73
 4.02 Intr - 110970 110691  280  0  1   22   46   175 0.206   2.83
 4.01 Init - 111599 111399  201  2  0   60   86   119 0.848   7.82
 4.00 Prom - 111659 111620   40                             -10.15

 5.03 PlyA - 111805 111800    6                               1.05
 5.02 Term - 113813 112921  893  0  2   30   41   304 0.421  11.50
 5.01 Init - 115254 115032  223  0  1   88   96   176 0.819  17.16
 5.00 Prom - 120311 120272   40                              -6.45

 6.00 Prom + 120383 120422   40                              -5.25
 6.01 Sngl + 121182 121547  366  2  0   21   42   275 0.899  12.04
 6.02 PlyA + 122476 122481    6                               1.05

 7.07 PlyA - 122806 122801    6                               1.05
 7.06 Term - 144115 143736  380  2  2   39   36   312 0.357  15.07
 7.05 Intr - 152978 152902   77  1  2   42   68    96 0.009   1.24
 7.04 Intr - 154662 154611   52  1  1   89   97    28 0.049   0.85
 7.03 Intr - 163428 163268  161  2  2  110   90    16 0.010   2.71
 7.02 Intr - 170040 169876  165  2  0   52   61    89 0.019   0.75
 7.01 Init - 197784 197723   62  0  2   77   65    90 0.766   6.37

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term +    571    912  342  0  0   43   47   142 0.858  -0.87
S.002 Term -   9685   9552  134  2  2   76   45    80 0.867  -0.23


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815574f:3479245_3679799|GENSCAN_predicted_peptide_1|286_aa
MGRESPLLKRRGKSEKDFVLWLGCQLRHRRIEQQLASGNGSLQMDIGNLGAGDRQIPDGT
LGAGRNAQVKAGQQCCGPLTAETRSPQLEQQRLAAVGCVAHLHFPPTKVALGFINTLGGM
HMCWASLLSLWPWSGKDLACGCGSCKGLVSDLWECALRGTHSHSCSVQMKLSVLTVPECV
QPPHSLPGVGAARVEAAVKGLSVTSGSGALKRMLNCGQCSDGDGMIFNPYNNHKENIYEI
YTKRNKKRIKTCYNKNSTKQEKEEVMEGMMNAKINKHAENDNEIAI

>gi568815574f:3479245_3679799|GENSCAN_predicted_CDS_1|861_bp
atggggagagaatccccgcttctgaaaagaagaggaaaaagtgaaaaagactttgtcttg
tggcttggatgccagctcagacacagacgaatagagcagcagctggcatcagggaacggt
agtctccaaatggatataggaaacctaggggctggtgatcggcagattcctgatgggacc
ttgggagctgggagaaatgctcaggtgaaggcagggcagcagtgctgtgggcctttaact
gcagagaccaggtcccctcagctggagcaacagagactggcagctgtggggtgtgtggca
cacttgcacttccctcctacaaaagtagctctgggttttattaatactcttgggggcatg
cacatgtgctgggcctccttgctctctctctggccctggagtggcaaggacttagcctgt
ggctgtggcagctgcaaggggctagtcagcgacctctgggagtgtgctctcagaggaaca
cacagccacagctgcagtgttcagatgaagttatctgtgctgacagtgccagaatgtgtc
cagcctccccattccctccctggcgtaggggcagcaagggtggaggcagctgtaaagggc
ttgtcagtgacctctgggagtggtgctctcaaaagaatgctgaactgtggccagtgttca
gatggagatggtatgatattcaatccctataataaccacaaggaaaatatctatgaaata
tacacaaaaagaaataagaagagaattaaaacatgctataacaaaaactcaactaaacaa
gagaaagaagaagtaatggagggaatgatgaatgcaaaaattaataagcatgcagaaaat
gataacgagattgcaatataa

>gi568815574f:3479245_3679799|GENSCAN_predicted_peptide_2|226_aa
MEAAADGPAETQSPVEKDSPAKTQSPAQDTSIMSRNNADTGRVLALPEHKKKRKGNLPAE
SVKILRDWMYKHRFKAYPSEEEKQMLSEKTNLSLLRISNWFINARRRILPDMLQQRRNDP
IIGHKTGKDAHATHLQSTEASVPAKSGPVGQMSREKQPDPESAPSQKLTGIAQPKKKVKI
SITSPSSPELVSPEEYADFSSFLLLVDAAVQTAAELELEKKQEPNP

>gi568815574f:3479245_3679799|GENSCAN_predicted_CDS_2|681_bp
atggaggccgctgcagacggcccggctgagacccaaagcccggtggaaaaagacagcccg
gcgaagacccaaagcccagcccaagacacctcaatcatgtcgagaaataacgcagataca
ggcagagttcttgccttaccagagcacaagaagaagcgcaagggaaacttgccagccgag
tccgttaagatcctccgcgactggatgtataagcatcggtttaaggcctacccttcagaa
gaagagaagcaaatgctgtcagagaagaccaatttgtctttgttgcggatttctaactgg
tttatcaatgctcgcagacgcattctcccggatatgcttcaacagcgtagaaacgacccc
atcattggccacaaaacgggcaaagatgcccatgccacccacctgcagagcaccgaggcg
tctgtgccggccaagtcagggccagtgggccagatgtcaagagagaagcaaccagatccg
gagtcggcccctagccagaagctcaccggaatagcccagccaaagaaaaaggtcaagatt
tctatcacttccccgtcttctccagaacttgtgtctccagaggagtacgccgacttcagc
agcttcctgctgctagtcgatgcagcagtacaaacggctgccgagctggagctagagaag
aagcaagagcctaatccatga

>gi568815574f:3479245_3679799|GENSCAN_predicted_peptide_3|65_aa
MNAPEGRNSEHIRTTGGTNSRRATLRAVTLTTRVHGFILEVSETKNPPIPDTILHLLTVY
FRHSK

>gi568815574f:3479245_3679799|GENSCAN_predicted_CDS_3|198_bp
atgaacgcaccagaaggaagaaattccgaacacatccgaacaacaggaggaacaaactcc
agacgcgccaccttaagagctgtaacactcaccacgagggtccacggcttcattcttgaa
gtcagtgagaccaagaacccaccaattccggacacaatcctacatcttttgactgtatat
ttccgtcattccaaatag

>gi568815574f:3479245_3679799|GENSCAN_predicted_peptide_4|286_aa
MSELPFTIASKRIKYLGIQLTRDVKDLFKENYKPLLNEIKEDTNKWKNIPCSWIGRINIV
KTAILPKIKDLNVRPRTIKILEQNLDNTIQDTGTGKDFMSETPKALATKAKIDKWHLIKL
KSFCTAKETIIRVNRQPTEWEKIFAIYPSDKELISRIYKEPSPVSAAPCSTVPSPIDHPR
AEECRHMARDWQAAPPAALVWDPLGEASWAPESGGFVNAPINTVSSYSGGDLEHLCVDTR
YLANLVGMWRTFASSSGIVNAPISALSKQTTQLYQSAGCGWDQIRE

>gi568815574f:3479245_3679799|GENSCAN_predicted_CDS_4|861_bp
atgagtgaactcccattcacaattgcttcaaagagaataaaatacttaggaatccaactt
acaagggacgtgaaggacctcttcaaggagaactacaaaccactgctcaatgaaataaaa
gaggatacaaacaaatggaagaacattccatgctcatggataggaagaatcaatatcgtg
aaaacggccatactgcccaagatcaaagacttaaacgtaagacctaggaccataaaaatc
ctagaacaaaacctggacaataccattcaggacacaggcacgggcaaagacttcatgtct
gaaacaccaaaagcattggcaacgaaagccaaaatagacaaatggcatctaattaaacta
aagagcttctgcacagcaaaagaaactatcatcagagtgaacaggcaacctacagaatgg
gagaaaatttttgcaatctatccatctgacaaagagctaatatccagaatctacaaagaa
ccctccccggtgagcgccgccccctgctccacggtgcctagtcccatcgaccacccaagg
gctgaggagtgcaggcacatggcacgggactggcaggcagctccacctgcagccctggtg
tgggatccactgggtgaagccagctgggctcctgagtctggtgggtttgtgaatgcacca
atcaacactgtatctagctactctggtggggacttggagcacctttgtgtggacactcgg
tatctagctaatctggtggggatgtggagaacctttgcgtctagctctgggattgtaaac
gcaccaatcagcgccctgtcaaaacagaccactcagctctaccaatcagcaggatgtggg
tgggaccagataagagaataa

>gi568815574f:3479245_3679799|GENSCAN_predicted_peptide_5|371_aa
MGKSQCKKAENSKNQNASPPPKDHNSSPAREQNWTENEFDELTEVGFRRWVITNNSELKE
HVLSQCKEAKNLEKGGPRFIKQVLRDLQRDLDSHTITVGDFNTPLSVLDRSTRQKINNDV
QDLNLALDQVEPIDLYRTLHPKSTEYTFSSAPHCTYSKKDHIIGSKTLLSKCKRMEIITN
SLSDHSAIKLELRIKKLIQNHTNTWKMNNLLLNDYCVNNKIKAEINKFFKTNENEDTTYQ
NLWDTFKAVFRGKFIALNAHNRKQEISKIDILTSKLKELEKQQQTNSKASRRHETTKIRA
ELKELETQITLQKINESRSCFLKKINKIDRLLARLIKEKTEKNQIDAIKNDIRDITTDLT
EICGYSHQRIL

>gi568815574f:3479245_3679799|GENSCAN_predicted_CDS_5|1116_bp
atggggaaaagccagtgcaaaaaggctgaaaattccaaaaaccagaatgcctctcctcct
ccaaaggatcacaactcatctccagcaagggaacaaaactggacagagaatgagtttgat
gaactgacagaagtaggcttcagaaggtgggtaataacaaacaactccgagctaaaggag
catgttctatcccaatgcaaggaagctaagaatcttgaaaaaggaggacccagattcata
aagcaagttcttagagacctacaaagagacttagactctcacacaataacagtgggagac
tttaacaccccactgtcagtattggacagatcaacaagacagaaaattaacaacgatgtt
caggacttgaacttagctctagaccaagtggaaccaatagacctctacagaactctccac
cccaaatcaacagaatatacattctcttcagcacctcattgcacttattctaaaaaggac
cacataattggaagtaaaacactcctcagcaaatgcaaaagaatggaaatcataacaaac
agtctctcagaccacagtgcaatcaaattagaactcaggattaagaaactcattcaaaac
cacacaaatacatggaaaatgaacaacctgctcctgaatgactactgtgtaaataacaaa
attaaggcagaaataaataagttcttcaaaaccaatgagaatgaagacacaacgtaccag
aatctctgggacacatttaaagcagtgtttagaggaaaatttatagcactaaatgcccac
aacagaaagcaggaaatatctaaaattgacatcctaacatcaaaattaaaagaactagag
aagcaacagcaaacaaattcaaaagctagcagaagacatgaaacaactaagatcagagca
gaactgaaggagttagagacacaaataacccttcaaaaaatcaatgaatccaggagctgc
tttttgaaaaaaatcaacaaaatagatagattgctagccagattaataaaggagaaaaca
gagaagaatcaaatagatgcaataaaaaatgatataagggatatcaccactgatctcaca
gaaatatgtgggtattcccatcagagaatactgtaa

>gi568815574f:3479245_3679799|GENSCAN_predicted_peptide_6|121_aa
MSRGAEEQSGREWQRAVDSSRVSQKRRKEEASEHREFSRELPDPSTFQLPIHLAELHLQH
SIKACTHPLSPRVIGSFWDTGQVLRIQKAVTLALCPCDKAEGPLSLFTIKQSADGKTERP
L

>gi568815574f:3479245_3679799|GENSCAN_predicted_CDS_6|366_bp
atgtcaagaggagcagaggaacagagcggcagagagtggcagagagcagtagacagcagc
agggtgtcacagaaaagaaggaaggaagaagcgtctgaacatcgagagttcagcagagaa
ctccccgacccctccaccttccagctccccatccatcttgctgagctccacctccaacat
tcaataaaagcttgcactcatcctttgagcccacgtgtgattggatccttctgggacacg
gggcaagtgctcaggatacagaaggctgtcacactggccctctgcccttgcgataaggca
gagggtccattgagcttatttaccatcaagcaatctgcagatggcaaaactgaaagacct
ttgtag

>gi568815574f:3479245_3679799|GENSCAN_predicted_peptide_7|298_aa
MIRGSHRKDPKQHGILHWKLRNQEKAQEREIRDTRKRQKLSWLPCRLTNPRIPEKHLLTA
TNMASHGTLGKTALEEDVLEKGYTVAAAHFWLILTYCSESPVKQPKFSLPQSADCRKLQS
NIGIGWNREGLEIFVHFENDMERFRRRNNAYHWLAVNKYVGKSLFGAVSSEGCNKGLSTR
ASGCGRCTRSPSSASPPAPRSISHGALAAFPQGRAQDLQPAMPEPPTHSIGSCVARASPT
STTPCSRVPSPLDHLRAEECERMARDWQAAPPAAPVRDPLREASWAPESGEDVESLYV

>gi568815574f:3479245_3679799|GENSCAN_predicted_CDS_7|897_bp
atgatcagaggctcccatcgaaaagatcccaaacagcatggaatcctgcactggaaacta
aggaatcaggagaaggctcaggagagagagataagagacacaagaaaaaggcagaagctc
tcatggctgccttgcaggctcacaaatcccagaatccctgagaagcacctgttaactgct
acaaatatggcaagccatggcactttaggaaaaactgccctggaagaggatgtcttagaa
aagggctatactgttgcagctgcccacttttggttgatacttacatattgctcagaatca
cccgtaaagcagcccaagttttctcttcctcaatcagctgattgtagaaaactccaatca
aacataggtataggatggaatagagaaggcttggagatctttgtgcattttgagaatgac
atggagaggttcagaagaagaaataatgcttatcactggcttgctgtcaataaatacgtg
ggtaaatctctgttcggggctgtcagctctgaaggctgcaataaaggacttagcacccgg
gccagcggctgcggaaggtgtactaggtcccccagcagtgccagcccaccggcaccgcgc
tcgatttctcacggagccttagcggccttcccgcagggcagggctcaggacctgcagcct
gccatgcctgagcctcccacccactccataggctcctgtgtggccagagcctccccgacg
agcaccaccccctgctccagggtgcccagtcccctcgaccacctaagggctgaagagtgc
gagcgcatggcgcgggactggcaggcagctccacctgcagccccggtgcgagatccacta
cgtgaagccagctgggctcctgagtctggtgaggacgtggagagtctttatgtctag