Result of FASTA (ccds) for pF1KB9787
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB9787, 191 aa
  1>>>pF1KB9787 191 - 191 aa - 191 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 4.9252+/-0.00101; mu= 15.0749+/- 0.061
 mean_var=67.8263+/-13.551, 0's: 0 Z-trim(105.0): 185  B-trim: 510 in 2/48
 Lambda= 0.155731
 statistics sampled from 7991 (8206) to 7991 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.637), E-opt: 0.2 (0.252), width:  16
 Scan time:  1.660

The best scores are:                                      opt bits E(32554)
CCDS3458.1 RHOH gene_id:399|Hs108|chr4             ( 191) 1267 293.4 5.5e-80
CCDS5348.1 RAC1 gene_id:5879|Hs108|chr7            ( 192)  532 128.3 2.8e-30
CCDS222.1 CDC42 gene_id:998|Hs108|chr1             ( 191)  524 126.5 9.8e-30
CCDS13945.1 RAC2 gene_id:5880|Hs108|chr22          ( 192)  523 126.3 1.2e-29
CCDS854.1 RHOC gene_id:389|Hs108|chr1              ( 193)  522 126.1 1.4e-29
CCDS221.1 CDC42 gene_id:998|Hs108|chr1             ( 191)  521 125.8 1.6e-29
CCDS11798.1 RAC3 gene_id:5881|Hs108|chr17          ( 192)  517 124.9 2.9e-29
CCDS2795.1 RHOA gene_id:387|Hs108|chr3             ( 193)  512 123.8 6.4e-29
CCDS1699.1 RHOB gene_id:388|Hs108|chr2             ( 196)  507 122.7 1.4e-28
CCDS33191.1 RHOQ gene_id:23433|Hs108|chr2          ( 205)  495 120.0 9.5e-28
CCDS7748.1 RHOG gene_id:391|Hs108|chr11            ( 191)  479 116.4 1.1e-26
CCDS10068.1 RHOV gene_id:171177|Hs108|chr15        ( 236)  480 116.7 1.1e-26
CCDS9757.1 RHOJ gene_id:57381|Hs108|chr14          ( 214)  479 116.4 1.2e-26
CCDS1575.1 RHOU gene_id:58480|Hs108|chr1           ( 258)  471 114.7 4.8e-26
CCDS2190.1 RND3 gene_id:390|Hs108|chr2             ( 244)  429 105.2 3.2e-23
CCDS8155.1 RHOD gene_id:29984|Hs108|chr11          ( 210)  427 104.7 3.8e-23
CCDS82775.1 RHOA gene_id:387|Hs108|chr3            ( 187)  396 97.7 4.4e-21
CCDS9222.1 RHOF gene_id:54509|Hs108|chr12          ( 211)  391 96.7 1.1e-20
CCDS11452.1 RND2 gene_id:8153|Hs108|chr17          ( 227)  376 93.3 1.1e-19
CCDS8771.1 RND1 gene_id:27289|Hs108|chr12          ( 232)  332 83.4 1.1e-16
CCDS7155.1 RAB18 gene_id:22931|Hs108|chr10         ( 206)  292 74.4 5.1e-14
CCDS10183.1 RAB8B gene_id:51762|Hs108|chr15        ( 207)  292 74.4 5.1e-14
CCDS41846.1 RAB35 gene_id:11021|Hs108|chr12        ( 201)  285 72.8 1.5e-13
CCDS5349.1 RAC1 gene_id:5879|Hs108|chr7            ( 211)  285 72.8 1.5e-13
CCDS6662.1 RASEF gene_id:158158|Hs108|chr9         ( 740)  287 73.7   3e-13
CCDS8224.1 RAB6A gene_id:5870|Hs108|chr11          ( 208)  276 70.8 6.2e-13
CCDS11703.1 RAB37 gene_id:326624|Hs108|chr17       ( 216)  276 70.8 6.4e-13
CCDS8223.1 RAB6A gene_id:5870|Hs108|chr11          ( 208)  271 69.7 1.4e-12
CCDS2633.1 RAB5A gene_id:5868|Hs108|chr3           ( 215)  271 69.7 1.4e-12
CCDS3082.1 RAB6B gene_id:51560|Hs108|chr3          ( 208)  269 69.2 1.9e-12
CCDS10212.1 RAB11A gene_id:8766|Hs108|chr15        ( 216)  268 69.0 2.2e-12
CCDS12257.1 RAB3D gene_id:9545|Hs108|chr19         ( 219)  268 69.0 2.3e-12
CCDS12339.1 RAB8A gene_id:4218|Hs108|chr19         ( 207)  267 68.8 2.5e-12
CCDS31613.1 RAB1B gene_id:81876|Hs108|chr11        ( 201)  265 68.3 3.4e-12
CCDS9003.1 RAB21 gene_id:23011|Hs108|chr12         ( 225)  265 68.4 3.7e-12
CCDS11419.1 RAB5C gene_id:5878|Hs108|chr17         ( 216)  264 68.1 4.2e-12
CCDS58551.1 RAB5C gene_id:5878|Hs108|chr17         ( 249)  264 68.2 4.6e-12
CCDS46306.1 RAB1A gene_id:5861|Hs108|chr2          ( 205)  261 67.4 6.4e-12
CCDS12201.1 RAB11B gene_id:9230|Hs108|chr19        ( 218)  260 67.2 7.8e-12
CCDS10460.1 RAB26 gene_id:25837|Hs108|chr16        ( 256)  255 66.2 1.9e-11
CCDS42410.1 RAB12 gene_id:201475|Hs108|chr18       ( 244)  253 65.7 2.5e-11
CCDS14515.1 RAB9B gene_id:51209|Hs108|chrX         ( 201)  252 65.4 2.5e-11
CCDS14156.1 RAB9A gene_id:9367|Hs108|chrX          ( 201)  252 65.4 2.5e-11
CCDS82198.1 RAB37 gene_id:326624|Hs108|chr17       ( 196)  250 65.0 3.4e-11
CCDS1058.1 RAB13 gene_id:5872|Hs108|chr1           ( 203)  250 65.0 3.5e-11
CCDS76691.1 RAB15 gene_id:376267|Hs108|chr14       ( 212)  250 65.0 3.6e-11
CCDS32722.1 RAB37 gene_id:326624|Hs108|chr17       ( 223)  250 65.0 3.8e-11
CCDS54161.1 RAB37 gene_id:326624|Hs108|chr17       ( 228)  250 65.0 3.8e-11
CCDS76806.1 RAB26 gene_id:25837|Hs108|chr16        ( 190)  249 64.7 3.9e-11
CCDS8264.1 RAB30 gene_id:27314|Hs108|chr11         ( 203)  248 64.5 4.8e-11


>>CCDS3458.1 RHOH gene_id:399|Hs108|chr4                  (191 aa)
 initn: 1267 init1: 1267 opt: 1267  Z-score: 1549.5  bits: 293.4 E(32554): 5.5e-80
Smith-Waterman score: 1267; 100.0% identity (100.0% similar) in 191 aa overlap (1-191:1-191)

               10        20        30        40        50        60
pF1KB9 MLSSIKCVLVGDSAVGKTSLLVRFTSETFPEAYKPTVYENTGVDVFMDGIQISLGLWDTA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 MLSSIKCVLVGDSAVGKTSLLVRFTSETFPEAYKPTVYENTGVDVFMDGIQISLGLWDTA
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB9 GNDAFRSIRPLSYQQADVVLMCYSVANHNSFLNLKNKWIGEIRSNLPCTPVLVVATQTDQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 GNDAFRSIRPLSYQQADVVLMCYSVANHNSFLNLKNKWIGEIRSNLPCTPVLVVATQTDQ
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB9 REMGPHRASCVNAMEGKKLAQDVRAKGYLECSALSNRGVQQVFECAVRTAVNQARRRNRR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS34 REMGPHRASCVNAMEGKKLAQDVRAKGYLECSALSNRGVQQVFECAVRTAVNQARRRNRR
              130       140       150       160       170       180

              190 
pF1KB9 RLFSINECKIF
       :::::::::::
CCDS34 RLFSINECKIF
              190 

>>CCDS5348.1 RAC1 gene_id:5879|Hs108|chr7                 (192 aa)
 initn: 511 init1: 430 opt: 532  Z-score: 657.0  bits: 128.3 E(32554): 2.8e-30
Smith-Waterman score: 532; 40.6% identity (73.8% similar) in 187 aa overlap (2-181:1-187)

               10        20        30        40        50        60
pF1KB9 MLSSIKCVLVGDSAVGKTSLLVRFTSETFPEAYKPTVYENTGVDVFMDGIQISLGLWDTA
        ...::::.:::.::::: ::. .:...::  : :::..: ...:..::  ..:::::::
CCDS53  MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTA
                10        20        30        40        50         

               70        80        90       100       110       120
pF1KB9 GNDAFRSIRPLSYQQADVVLMCYSVANHNSFLNLKNKWIGEIRSNLPCTPVLVVATQTDQ
       :.. .  .::::: :.:: :.:.:...  :: :.. ::  :.: . : ::...:.:. : 
CCDS53 GQEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPNTPIILVGTKLDL
      60        70        80        90       100       110         

                     130       140       150       160       170   
pF1KB9 RE-------MGPHRASCVNAMEGKKLAQDVRAKGYLECSALSNRGVQQVFECAVRTAVNQ
       :.       .  .. . ..  .:  .:... :  :::::::..::.. ::. :.:...  
CCDS53 RDDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVFDEAIRAVLCP
     120       130       140       150       160       170         

           180       190 
pF1KB9 ARRRNRRRLFSINECKIF
          ..:.:          
CCDS53 PPVKKRKRKCLLL     
     180       190       

>>CCDS222.1 CDC42 gene_id:998|Hs108|chr1                  (191 aa)
 initn: 526 init1: 415 opt: 524  Z-score: 647.3  bits: 126.5 E(32554): 9.8e-30
Smith-Waterman score: 524; 41.6% identity (72.1% similar) in 197 aa overlap (2-191:1-191)

               10        20        30        40        50        60
pF1KB9 MLSSIKCVLVGDSAVGKTSLLVRFTSETFPEAYKPTVYENTGVDVFMDGIQISLGLWDTA
        ...::::.:::.::::: ::. .:.. ::  : :::..: .: :.. :   .:::.:::
CCDS22  MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTA
                10        20        30        40        50         

               70        80        90       100       110       120
pF1KB9 GNDAFRSIRPLSYQQADVVLMCYSVANHNSFLNLKNKWIGEIRSNLPCTPVLVVATQTDQ
       :.. .  .::::: :.:: :.:.::.. .:: :.:.::. ::  . : :: :.:.:: : 
CCDS22 GQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDL
      60        70        80        90       100       110         

                     130       140       150       160       170   
pF1KB9 RE-------MGPHRASCVNAMEGKKLAQDVRAKGYLECSALSNRGVQQVFECAVRTAVNQ
       :.       .. .. . ..   ..:::.:..:  :.:::::..::...::. :. .:.. 
CCDS22 RDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQRGLKNVFDEAILAALEP
     120       130       140       150       160       170         

           180       190 
pF1KB9 ARRRNRRRLFSINECKIF
        . . .:.      : ::
CCDS22 PETQPKRK------CCIF
     180             190 

>>CCDS13945.1 RAC2 gene_id:5880|Hs108|chr22               (192 aa)
 initn: 528 init1: 420 opt: 523  Z-score: 646.0  bits: 126.3 E(32554): 1.2e-29
Smith-Waterman score: 523; 39.3% identity (73.8% similar) in 191 aa overlap (2-185:1-191)

               10        20        30        40        50        60
pF1KB9 MLSSIKCVLVGDSAVGKTSLLVRFTSETFPEAYKPTVYENTGVDVFMDGIQISLGLWDTA
        ...::::.:::.::::: ::. .:...::  : :::..: ...:..:.  ..:::::::
CCDS13  MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDSKPVNLGLWDTA
                10        20        30        40        50         

               70        80        90       100       110       120
pF1KB9 GNDAFRSIRPLSYQQADVVLMCYSVANHNSFLNLKNKWIGEIRSNLPCTPVLVVATQTDQ
       :.. .  .::::: :.:: :.:.:...  :. :.. ::. :.: . : ::...:.:. : 
CCDS13 GQEDYDRLRPLSYPQTDVFLICFSLVSPASYENVRAKWFPEVRHHCPSTPIILVGTKLDL
      60        70        80        90       100       110         

                     130       140       150       160       170   
pF1KB9 RE-------MGPHRASCVNAMEGKKLAQDVRAKGYLECSALSNRGVQQVFECAVRTAVNQ
       :.       .  .. . ..  .:  ::... .  :::::::..::.. ::. :.:...  
CCDS13 RDDKDTIEKLKEKKLAPITYPQGLALAKEIDSVKYLECSALTQRGLKTVFDEAIRAVLCP
     120       130       140       150       160       170         

           180       190 
pF1KB9 ARRRNRRRLFSINECKIF
          :...:  :.      
CCDS13 QPTRQQKRACSLL     
     180       190       

>>CCDS854.1 RHOC gene_id:389|Hs108|chr1                   (193 aa)
 initn: 477 init1: 342 opt: 522  Z-score: 644.8  bits: 126.1 E(32554): 1.4e-29
Smith-Waterman score: 522; 42.6% identity (73.8% similar) in 183 aa overlap (6-181:7-188)

                10        20        30        40        50         
pF1KB9  MLSSIKCVLVGDSAVGKTSLLVRFTSETFPEAYKPTVYENTGVDVFMDGIQISLGLWDT
             : :.:::.: ::: ::. :... :::.: :::.::  .:. .:: :. :.::::
CCDS85 MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYIADIEVDGKQVELALWDT
               10        20        30        40        50        60

      60        70        80        90       100       110         
pF1KB9 AGNDAFRSIRPLSYQQADVVLMCYSVANHNSFLNLKNKWIGEIRSNLPCTPVLVVATQTD
       ::.. .  .::::: ..::.:::.:. . .:. :. .::  :..   : .:...:... :
CCDS85 AGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKD
               70        80        90       100       110       120

            120       130       140       150       160       170  
pF1KB9 -------QREMGPHRASCVNAMEGKKLAQDVRAKGYLECSALSNRGVQQVFECAVRTAVN
              .::..  .   : . ::. .:. . : ::::::: ...::..::: :.:... 
CCDS85 LRQDEHTRRELAKMKQEPVRSEEGRDMANRISAFGYLECSAKTKEGVREVFEMATRAGL-
              130       140       150       160       170          

            180       190 
pF1KB9 QARRRNRRRLFSINECKIF
       :.:. .:::          
CCDS85 QVRKNKRRRGCPIL     
     180       190        

>>CCDS221.1 CDC42 gene_id:998|Hs108|chr1                  (191 aa)
 initn: 525 init1: 415 opt: 521  Z-score: 643.6  bits: 125.8 E(32554): 1.6e-29
Smith-Waterman score: 521; 42.2% identity (74.3% similar) in 187 aa overlap (2-181:1-187)

               10        20        30        40        50        60
pF1KB9 MLSSIKCVLVGDSAVGKTSLLVRFTSETFPEAYKPTVYENTGVDVFMDGIQISLGLWDTA
        ...::::.:::.::::: ::. .:.. ::  : :::..: .: :.. :   .:::.:::
CCDS22  MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTA
                10        20        30        40        50         

               70        80        90       100       110       120
pF1KB9 GNDAFRSIRPLSYQQADVVLMCYSVANHNSFLNLKNKWIGEIRSNLPCTPVLVVATQTDQ
       :.. .  .::::: :.:: :.:.::.. .:: :.:.::. ::  . : :: :.:.:: : 
CCDS22 GQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDL
      60        70        80        90       100       110         

                     130       140       150       160       170   
pF1KB9 RE-------MGPHRASCVNAMEGKKLAQDVRAKGYLECSALSNRGVQQVFECAVRTAVNQ
       :.       .. .. . ..   ..:::.:..:  :.:::::...:...::. :. .:.. 
CCDS22 RDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALEP
     120       130       140       150       160       170         

           180       190 
pF1KB9 ARRRNRRRLFSINECKIF
        . .. ::          
CCDS22 PEPKKSRRCVLL      
     180       190       

>>CCDS11798.1 RAC3 gene_id:5881|Hs108|chr17               (192 aa)
 initn: 513 init1: 432 opt: 517  Z-score: 638.8  bits: 124.9 E(32554): 2.9e-29
Smith-Waterman score: 517; 41.8% identity (75.1% similar) in 177 aa overlap (2-171:1-177)

               10        20        30        40        50        60
pF1KB9 MLSSIKCVLVGDSAVGKTSLLVRFTSETFPEAYKPTVYENTGVDVFMDGIQISLGLWDTA
        ...::::.:::.::::: ::. .:...::  : :::..: ...:..::  ..:::::::
CCDS11  MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTA
                10        20        30        40        50         

               70        80        90       100       110       120
pF1KB9 GNDAFRSIRPLSYQQADVVLMCYSVANHNSFLNLKNKWIGEIRSNLPCTPVLVVATQTDQ
       :.. .  .::::: :.:: :.:.:...  :: :.. ::  :.: . : ::.:.:.:. : 
CCDS11 GQEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPHTPILLVGTKLDL
      60        70        80        90       100       110         

                     130       140       150       160       170   
pF1KB9 RE-------MGPHRASCVNAMEGKKLAQDVRAKGYLECSALSNRGVQQVFECAVRTAVNQ
       :.       .  .. . ..  .:  .:... .  :::::::..::.. ::. :.:...  
CCDS11 RDDKDTIERLRDKKLAPITYPQGLAMAREIGSVKYLECSALTQRGLKTVFDEAIRAVLCP
     120       130       140       150       160       170         

           180       190 
pF1KB9 ARRRNRRRLFSINECKIF
                         
CCDS11 PPVKKPGKKCTVF     
     180       190       

>>CCDS2795.1 RHOA gene_id:387|Hs108|chr3                  (193 aa)
 initn: 497 init1: 342 opt: 512  Z-score: 632.7  bits: 123.8 E(32554): 6.4e-29
Smith-Waterman score: 512; 42.3% identity (73.1% similar) in 182 aa overlap (6-180:7-187)

                10        20        30        40        50         
pF1KB9  MLSSIKCVLVGDSAVGKTSLLVRFTSETFPEAYKPTVYENTGVDVFMDGIQISLGLWDT
             : :.:::.: ::: ::. :... :::.: :::.::  .:. .:: :. :.::::
CCDS27 MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDT
               10        20        30        40        50        60

      60        70        80        90       100       110         
pF1KB9 AGNDAFRSIRPLSYQQADVVLMCYSVANHNSFLNLKNKWIGEIRSNLPCTPVLVVATQTD
       ::.. .  .::::: ..::.:::.:. . .:. :. .::  :..   : .:...:... :
CCDS27 AGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKD
               70        80        90       100       110       120

            120       130       140       150       160       170  
pF1KB9 -------QREMGPHRASCVNAMEGKKLAQDVRAKGYLECSALSNRGVQQVFECAVRTAVN
              .::..  .   :.  ::. .:. . : ::.:::: .. ::..::: :.:.:. 
CCDS27 LRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAAL-
              130       140       150       160       170          

            180       190 
pF1KB9 QARRRNRRRLFSINECKIF
       :::: ...           
CCDS27 QARRGKKKSGCLVL     
     180       190        

>>CCDS1699.1 RHOB gene_id:388|Hs108|chr2                  (196 aa)
 initn: 500 init1: 400 opt: 507  Z-score: 626.5  bits: 122.7 E(32554): 1.4e-28
Smith-Waterman score: 507; 40.9% identity (70.5% similar) in 193 aa overlap (6-191:7-196)

                10        20        30        40        50         
pF1KB9  MLSSIKCVLVGDSAVGKTSLLVRFTSETFPEAYKPTVYENTGVDVFMDGIQISLGLWDT
             : :.:::.: ::: ::. :... :::.: :::.::  .:. .:: :. :.::::
CCDS16 MAAIRKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDT
               10        20        30        40        50        60

      60        70        80        90       100       110         
pF1KB9 AGNDAFRSIRPLSYQQADVVLMCYSVANHNSFLNLKNKWIGEIRSNLPCTPVLVVATQTD
       ::.. .  .::::: ..::.:::.:: . .:. :. .::. :..   : .:...::.. :
CCDS16 AGQEDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPIILVANKKD
               70        80        90       100       110       120

     120              130       140       150       160       170  
pF1KB9 QR-------EMGPHRASCVNAMEGKKLAQDVRAKGYLECSALSNRGVQQVFECAVRTAVN
        :       :..  .   : . .:. .:  ..:  :::::: ...::..::: :.:.:. 
CCDS16 LRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAAL-
              130       140       150       160       170          

            180       190 
pF1KB9 QARRRNRRRLFSINECKIF
         ..:   .   :: ::..
CCDS16 --QKRYGSQNGCINCCKVL
       180       190      

>>CCDS33191.1 RHOQ gene_id:23433|Hs108|chr2               (205 aa)
 initn: 498 init1: 395 opt: 495  Z-score: 611.7  bits: 120.0 E(32554): 9.5e-28
Smith-Waterman score: 505; 40.8% identity (71.4% similar) in 196 aa overlap (5-190:10-204)

                    10        20        30        40        50     
pF1KB9      MLSSIKCVLVGDSAVGKTSLLVRFTSETFPEAYKPTVYENTGVDVFMDGIQISLG
                .:::.:::.::::: ::. .....::: : :::... .:.: . : :  ::
CCDS33 MAHGPGALMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLG
               10        20        30        40        50        60

          60        70        80        90       100       110     
pF1KB9 LWDTAGNDAFRSIRPLSYQQADVVLMCYSVANHNSFLNLKNKWIGEIRSNLPCTPVLVVA
       :.::::.. .  .::::: ..:: :.:.::.:  :: :.:..:. :..   : .: :...
CCDS33 LYDTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLIG
               70        80        90       100       110       120

         120       130               140       150       160       
pF1KB9 TQTDQREMGPHRASCVNAM--------EGKKLAQDVRAKGYLECSALSNRGVQQVFECAV
       :: : :.  :.  . .: :        .:.:::... :  :.:::::...:.. ::. :.
CCDS33 TQIDLRD-DPKTLARLNDMKEKPICVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAI
               130       140       150       160       170         

       170       180         190 
pF1KB9 RTAVNQARRRNRRRLFS--INECKIF
        . ..  ..  ..:. :  :: : : 
CCDS33 IAILTPKKHTVKKRIGSRCINCCLIT
     180       190       200     




191 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 18:56:26 2016 done: Fri Nov  4 18:56:27 2016
 Total Scan time:  1.660 Total Display time:  0.000

Function used was FASTA [36.3.4 Apr, 2011]
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