GENSCAN 1.0	Date run:  4-Nov-116	Time: 18:56:54

Sequence gi568815594f:40143387_40343959 : 200573 bp : 43.15% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   1246   1414  169  0  1   41   97   189 0.531  14.62
 1.02 Intr +   9394   9517  124  2  1  103  109    50 0.953   8.24
 1.03 Intr +  40473  40565   93  0  0   96   81    35 0.047   2.68
 1.04 Term +  55245  55383  139  0  1  102   45    51 0.027  -0.36
 1.05 PlyA +  57748  57753    6                               1.05

 2.00 Prom +  79098  79137   40                              -3.36
 2.01 Init +  79581  79653   73  2  1   30   81    85 0.975   3.23
 2.02 Term +  79970  80079  110  0  2   46   33   134 0.950   2.37
 2.03 PlyA +  80316  80321    6                               1.05

 3.00 Prom +  89287  89326   40                              -3.46
 3.01 Sngl + 100001 100576  576  1  0   78   40   815 0.990  69.87
 3.02 PlyA + 101728 101733    6                               1.05

 4.03 PlyA - 104372 104367    6                               1.05
 4.02 Term - 112581 112514   68  1  2   70   42    85 0.483   0.20
 4.01 Init - 118082 118016   67  2  1    8   98   119 0.481   4.15
 4.00 Prom - 138260 138221   40                              -1.56

 5.02 PlyA - 138714 138709    6                               1.05
 5.01 Sngl - 151701 151240  462  0  0   98   42   429 0.524  35.46
 5.00 Prom - 153748 153709   40                              -4.46

 6.00 Prom + 155393 155432   40                              -4.26
 6.01 Init + 163943 164104  162  1  0   68   76   126 0.656   9.13
 6.02 Intr + 164891 164942   52  1  1   92   99    36 0.662   3.58
 6.03 Intr + 166940 167105  166  0  1   92   50    31 0.474  -1.28
 6.04 Term + 169079 169250  172  2  1   91   43    74 0.481   0.50
 6.05 PlyA + 170781 170786    6                               1.05

 7.05 PlyA - 171557 171552    6                               1.05
 7.04 Term - 185775 185648  128  1  2   46   36   142 0.565   3.24
 7.03 Intr - 186439 186364   76  1  1   53  110    66 0.919   4.39
 7.02 Intr - 187724 187599  126  2  0   75   89   112 0.991  10.88
 7.01 Init - 187921 187871   51  1  0   58   44    65 0.938  -1.72
 7.00 Prom - 189336 189297   40                              -6.06

 8.00 Prom + 191010 191049   40                              -6.56
 8.01 Init + 192082 192145   64  0  1   63   78     4 0.884  -1.65
 8.02 Intr + 192441 192586  146  1  2   27  101   165 0.978  11.70
 8.03 Intr + 193824 193978  155  2  2   39  108   146 0.919  10.57
 8.04 Term + 197177 197264   88  2  1   55   46    92 0.622  -1.17
 8.05 PlyA + 197716 197721    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815594f:40143387_40343959|GENSCAN_predicted_peptide_1|174_aa
GTLHEQKMKEANHLAAIEIFEKVNASLLPQNVLDLHGLHVDEALEHLMRVLEKKTEEFKQ
NGGKPYLSVITGRGNHSQGGVARIKPAVIKYLISHSFRAAATFKASNSPRLHPKHVRKTG
APARVYFNWTSFMQRKVRVARGTSKTSTSGFFILRRPFNYPGIKVAFLLGERVG

>gi568815594f:40143387_40343959|GENSCAN_predicted_CDS_1|525_bp
ggtactcttcatgagcagaagatgaaagaagccaatcaccttgctgccatagagatcttt
gagaaagtcaatgcttcgctgctgccacagaatgttttagacctccatgggctgcatgtg
gatgaagctctagaacatttgatgagagttttagagaagaagactgaagaatttaagcag
aacggtgggaagccctatttgtctgtgattacggggagaggaaaccacagccagggagga
gttgctcgcatcaaaccagctgtcattaagtacctcataagccatagcttcagggctgct
gcaaccttcaaggcatctaattctccacggctacacccaaagcatgtaaggaagacgggt
gctcctgcccgtgtctactttaactggacatcatttatgcagagaaaggttcgtgtggct
cggggtaccagtaagacctccacctctggtttcttcattttaaggaggcccttcaattat
ccaggaattaaagtggccttcctcttgggagaacgagttggttga

>gi568815594f:40143387_40343959|GENSCAN_predicted_peptide_2|60_aa
MLVEEVTADVVEGARELELEEEAEEIATATPTCSNHYPDQLAAINIEAKRLGLAEGSDDC

>gi568815594f:40143387_40343959|GENSCAN_predicted_CDS_2|183_bp
atgctagtggaggaagtaactgcagatgtggtagaaggagcaagagagctagaattagaa
gaggaggctgaagaaatagccacagccactccaacctgcagcaaccactaccctgatcaa
ttggcagccatcaacattgaggcaaaaagattaggacttgctgaaggctcagatgattgt
tag

>gi568815594f:40143387_40343959|GENSCAN_predicted_peptide_3|191_aa
MLSSIKCVLVGDSAVGKTSLLVRFTSETFPEAYKPTVYENTGVDVFMDGIQISLGLWDTA
GNDAFRSIRPLSYQQADVVLMCYSVANHNSFLNLKNKWIGEIRSNLPCTPVLVVATQTDQ
REMGPHRASCVNAMEGKKLAQDVRAKGYLECSALSNRGVQQVFECAVRTAVNQARRRNRR
RLFSINECKIF

>gi568815594f:40143387_40343959|GENSCAN_predicted_CDS_3|576_bp
atgctgagttccatcaagtgcgtgttggtgggcgactctgctgtggggaaaacctctctg
ttggtgcgcttcacctccgagaccttcccggaggcctacaagcccacagtgtacgagaac
acaggggtggacgtcttcatggatggcatccagatcagcctgggcctctgggacacagcc
ggcaatgacgccttcagaagcatccggcccctgtcctaccagcaggcagacgtggtgctg
atgtgctactctgtggccaaccataactcattcctgaacttgaagaacaagtggattggt
gaaattaggagcaacttgccctgtacccctgtgctggtggtggccacccagactgaccag
cgggagatggggccccacagggcctcctgcgtcaatgccatggaagggaagaaactggcc
caggatgtcagagccaagggctacctggagtgctcagcccttagcaatcggggagtacag
caggtgtttgagtgcgccgtccgaactgccgtcaaccaggccaggagacgaaacagaagg
aggctcttctccatcaatgagtgcaagatcttctaa

>gi568815594f:40143387_40343959|GENSCAN_predicted_peptide_4|44_aa
MGAAAAALLLVVLSGSPLATLSGSSRASDESIIEWKKGSLEQEI

>gi568815594f:40143387_40343959|GENSCAN_predicted_CDS_4|135_bp
atgggagctgctgctgctgcactcttgctggtggtgctaagcggcagtcccctagccacg
ctgtcagggtcatccagagcatcagatgaaagcatcatcgaatggaaaaaagggagtttg
gagcaagagatctaa

>gi568815594f:40143387_40343959|GENSCAN_predicted_peptide_5|153_aa
MEMEAEMEMEVEMEMEAEMEMEAEMEMEVEMEMEAEMEMEAQMEMEMEAEMEMEMEAEME
MEMEAEMEMKMEAEMEMEMEVEMEAEMEMEMEVEMEAEIEVEMEAQMEMEIEAEMEMEAE
MEMEMEAEMEMEMEAEMEMEMEAEMEMEIEAEM

>gi568815594f:40143387_40343959|GENSCAN_predicted_CDS_5|462_bp
atggagatggaggcagagatggagatggaggtggagatggagatggaggcagagatggag
atggaggcagagatggagatggaggtggagatggaaatggaggcagagatggagatggag
gcacagatggagatggagatggaggcagaaatggagatggagatggaggcagagatggag
atggagatggaggcagagatggagatgaagatggaggcagagatggagatggagatggag
gtggagatggaggcagagatggagatggagatggaggtggagatggaggcagagatagag
gtggagatggaggcacagatggagatggagatagaggcagagatggagatggaggcagaa
atggagatggagatggaggcagagatggagatggagatggaggcagagatggagatggag
atggaggcagagatggagatggagattgaggcagagatgtag

>gi568815594f:40143387_40343959|GENSCAN_predicted_peptide_6|183_aa
MPPRPLWFYRLMFVLELEQDEVGNEAYRVTRDGGSSRKDRVIWFLEGILEISSYMGQLKL
REKWLDQGPTAETTQDCYGGSLITRFLPSCSILFNTWLLPRGPKWLLQLQAWFSVSVTGQ
EERNREGMTFSFRQTKPESKEKGSRKLRDLILKQGHRSQCEGATPGQIGHNLSTKVIKDS
NGM

>gi568815594f:40143387_40343959|GENSCAN_predicted_CDS_6|552_bp
atgcccccaaggccactgtggttctacagacttatgtttgtgctcgagttagagcaggat
gaggttggaaatgaagcttacagagttacaagggacggcggtagttccagaaaggacagg
gtcatctggtttttggaaggcatcttggagatttcatcgtacatggggcagttgaagctc
agagagaagtggcttgaccaaggcccaacggcagagacaacccaagactgttatggcggc
tccctgatcaccaggtttcttccatcttgttccattctcttcaacacatggcttctacct
cgtggcccaaaatggctgctccagctccaagcttggttcagcgtttcagtcactggtcag
gaggaaaggaacagagaagggatgactttcagcttcaggcagaccaagcctgaatcaaag
gagaagggatccagaaagttacgtgatctgattttaaagcaaggacacaggagccagtgt
gaaggggctacccctgggcaaatcggacacaatttgagcaccaaagtaattaaggacagc
aatgggatgtga

>gi568815594f:40143387_40343959|GENSCAN_predicted_peptide_7|126_aa
MRRRMAGPGLTPTAAQPGDRDSVVDEELEFPDIGDGGNCGYSQARGWQGEQQGNGSEVQP
LLTAICTNHTCLLAANGAPEFPSPVDSLQWILTLFGIKAKILTGNYKAVRDVSPDFPSPT
LSPSLM

>gi568815594f:40143387_40343959|GENSCAN_predicted_CDS_7|381_bp
atgcgcagacgcatggcagggccagggctgactcccactgcagctcagccaggtgaccgt
gatagtgtcgtggatgaggaattagagtttccagatataggtgatggtgggaactgtggc
tacagccaggccaggggctggcagggtgagcagcaggggaatgggtcagaagttcaacca
ttgctgactgccatctgcaccaaccacacttgcctcctagcagccaacggtgcccctgaa
ttcccttctccagtggattctctccagtggattctcaccttatttggaataaaagccaaa
atccttactggcaactacaaggccgtacgtgatgtctcccccgactttccttctccaaca
ctctccccctcgctcatgtag

>gi568815594f:40143387_40343959|GENSCAN_predicted_peptide_8|150_aa
MNWSHSCISFCWIYFAASRLRAAETADGKYAQKLFNDLFEDYSNALRPVEDTDKVLNVTL
QITLSQIKDMDERNQILTAYLWIRQIWHDAYLTWDRDQYDGLDSIRIPSDLVWRPDIVLY
NKYNIIASQKQVQNIIGNTMGFLSCGKKEK

>gi568815594f:40143387_40343959|GENSCAN_predicted_CDS_8|453_bp
atgaactggtcccattcctgcatctccttttgctggatctactttgctgcttccagactg
agagctgcagagacggcagatggaaaatatgctcagaagttgtttaatgacctttttgaa
gattattctaatgctcttcgtccagtggaagatacagataaagtcctgaatgtgaccctg
cagattacgctctctcagattaaggatatggatgaaagaaaccaaattctgactgcttat
ttgtggatccgccaaatctggcacgatgcctatctcacgtgggaccgagatcagtacgat
ggcctagactccatcaggatccccagtgacctcgtgtggaggccagacatcgtcttatat
aacaaatacaatatcattgcttctcagaagcaggtacagaacatcataggcaacacaatg
ggcttcctgagttgtggcaagaaggagaaatag