GENSCAN 1.0	Date run:  4-Nov-116	Time: 18:53:45

Sequence gi568815586f:12535774_12737715 : 201942 bp : 42.36% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   5600   5744  145  1  1   91   67    26 0.052   1.13
 1.02 Term +  25732  25892  161  2  2  105   39   159 0.636   9.82
 1.03 PlyA +  26873  26878    6                               1.05

 2.10 PlyA -  27724  27719    6                               1.05
 2.09 Term -  32642  32428  215  0  2   37   42   258 0.898  12.51
 2.08 Intr -  46702  46627   76  1  1   51   75    33 0.298  -3.53
 2.07 Intr -  46790  46737   54  2  0   66   63    87 0.408   2.26
 2.06 Intr -  60870  60710  161  1  2  126   39    79 0.266   5.59
 2.05 Intr -  64477  64359  119  0  2  100   22    81 0.166   1.89
 2.04 Intr -  64802  64705   98  2  2  125   40    53 0.110   2.09
 2.03 Intr -  76268  76098  171  2  0   85   47   126 0.005   7.42
 2.02 Intr -  81074  80977   98  0  2   76   34   112 0.260   3.41
 2.01 Init -  81301  81256   46  1  1   49   58    47 0.563  -1.30
 2.00 Prom -  81410  81371   40                              -5.95

 3.00 Prom +  87587  87626   40                              -5.95
 3.01 Init +  88052  88099   48  1  0   43   75    47 0.399  -0.10
 3.02 Intr +  88649  88856  208  1  1   22   91   218 0.536  13.23
 3.03 Intr +  90099  90121   23  1  2   71   37    17 0.068  -8.76
 3.04 Intr + 100004 100201  198  1  0   22   95   233 0.869  16.03
 3.05 Intr + 109932 110005   74  2  2   66   77    39 0.073  -2.11
 3.06 Intr + 111499 111636  138  1  0   43   44   151 0.108   4.86
 3.07 Intr + 122069 122191  123  2  0  -14   91   165 0.083   5.38
 3.08 Intr + 124838 124935   98  2  2   66   92    66 0.033   3.53
 3.09 Intr + 125984 126510  527  0  2  -60   66   642 0.042  38.93
 3.10 Intr + 129562 129687  126  0  0   67   -2   146 0.023   3.46
 3.11 Intr + 137776 137901  126  0  0   63    9   116 0.003   1.16
 3.12 Intr + 153055 153141   87  0  0   46   63   102 0.033   2.75
 3.13 Intr + 159113 159195   83  1  2   66  111    26 0.094   0.22
 3.14 Intr + 160687 160925  239  1  2  -51   14   226 0.007  -2.36
 3.15 Term + 178717 179084  368  2  2  117   42   199 0.948  11.98
 3.16 PlyA + 179539 179544    6                               1.05

 4.00 Prom + 181560 181599   40                              -9.55
 4.01 Sngl + 182067 182606  540  2  0   53   37   538 0.555  40.63
 4.02 PlyA + 183008 183013    6                               1.05

 5.03 PlyA - 184125 184120    6                               1.05
 5.02 Term - 188481 188216  266  1  2  -63   55   275 0.401   3.79
 5.01 Init - 189530 189440   91  2  1   41   -2   184 0.611   3.40

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init + 126049 126510  462  0  0   65   66   565 0.847  47.74


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815586f:12535774_12737715|GENSCAN_predicted_peptide_1|101_aa
MKNKRGTGLDKVTLTLFPPNSISHKALRRENKKLLLKLVYLIGRPSKVASVNKEVTRRRA
PQRQDPSPCPKIEGFFGWLVEESSTVTTQVASLLTPKANWG

>gi568815586f:12535774_12737715|GENSCAN_predicted_CDS_1|306_bp
atgaagaataaaagaggtacaggccttgacaaggttacactgacattatttccacccaac
agtatctcccacaaagcgttaaggagggaaaataagaaactcttattaaaattagtctat
cttattggaaggcccagtaaggtagctagtgtaaataaagaagtcactaggcgtcgggcc
ccccaacgccaagacccgagcccctgtccgaaaattgagggctttttcggttggttggtt
gaagaaagcagcaccgtcaccacccaggtggcctcgctgcttacaccaaaggcgaactgg
ggataa

>gi568815586f:12535774_12737715|GENSCAN_predicted_peptide_2|345_aa
MAECGELAANSFITTGHSHHTSKPQSSSSLTLKKMGRESVTHTECEGKFASLMPESRGRG
TSSGMAERTLEAAPNASLRRRRLLLPLHDSLWVFTDALESRRDRRVRPKYVLVTFLPMAS
RGRDHNFSSWSPTPPPMLHEKSYLCSFARSPQGSSVPSQSAKMHGKAVLLFPQVPLGGEE
RVAPLVQVPTLEEREERQRGSEGKEETEKEGVKEREKERQRERGRDRDKKACCQQQQPSF
TGQGVSTAPKKTTQHSAGDPALIPLSPPNHKGHAEGERDCVQKQAYSHGIVRKLKVDKSR
KKLLVDQAEAHWPKTKEVCKLHDECLQAKKEEIIKMLSKEEETER

>gi568815586f:12535774_12737715|GENSCAN_predicted_CDS_2|1038_bp
atggcagagtgtggagaactcgcagcaaactcatttatcaccactgggcacagccaccat
acttccaaaccccaatcctcatcttcccttacactgaagaaaatgggacgagagagtgtg
actcatacagaatgtgagggaaaattcgcttccctgatgccagagtcacggggacgaggg
accagttcaggaatggcagagcggaccctggaggcggccccaaacgcctcccttcgccgc
cgccgcctcctcctccccctccatgacagtctctgggtgtttacagacgctctggagagc
cgccgagaccggagggtgaggcccaaatacgtgcttgtaaccttcctgcccatggcttcc
agaggacgagatcataacttctcttcatggtcgcccactcctccccctatgctgcatgag
aaaagctacctctgcagttttgccaggtccccgcaaggcagttcagtccccagccaaagt
gctaagatgcacggcaaggctgttctcctgtttccacaggtgcccctgggaggggaagag
agagtagctccactcgtgcaagtccctaccctagaggagagagaggagaggcagagaggc
agtgagggaaaggaagagacagaaaaagaaggagtcaaagagagagagaaagagaggcag
agagagagaggaagagacagagacaaaaaggcatgttgccagcagcagcagccttctttc
acaggacagggagtcagtacagcaccaaagaagaccactcagcacagtgccggagaccct
gccctgattcccctttctcctcccaaccacaaaggccatgcagaaggtgaaagggattgt
gttcaaaaacaagcgtattctcatggaattgtccgcaagctgaaggtagacaagtcccgc
aagaagctcctggtggaccaggctgaggcccactggcctaagactaaggaagtgtgcaaa
cttcatgacgagtgcctccaggccaagaaggaggagatcatcaagatgttgtccaaggag
gaagagaccgagagataa

>gi568815586f:12535774_12737715|GENSCAN_predicted_peptide_3|821_aa
MWMGRKSSDKCPYKTKGVSEAGYFPDPFTGLTTGASYTQPTTLNSLQEGACEQMSEGTGV
NEHGNRPAALVLAGVNFMQAQWQHPEFYSVWDKVVGGKVKKPGKRGRKPAKIDLKAKLER
SRQSARECRARKKLRYQYLEELVSSRERAICALREELEMLAFAGSPEENQLCASLPNLMF
SDIRLYRKHDWGGLRKLTVMMEDKVRAGILHGSIGTRDRGYHTLLNNRIFSRLDINVFDE
DEKKGRIQIPLKGCIPVPSLLTDGLREPGARILIKIQPQKTCQQVPIYGVLSIADLASGY
LEEAHQEVDDSVGSAFPRGGEEIVTMTVPVGAIEKEHRGHKACIKDPRCRNHFLGFFSGH
LEAQRIDDGVEPVYADGEENVDLDTWSEILKISHNLARCTTQRPPSSGELEQDERRAGNA
DEKVSTCHGDHKVVGGRLSPPTPMDDQTNQGIAEDRKQPQNPKEDAGCGHFPGFQHIVKL
LYTHESVCPFPQPNHLEAEDPNAQKQDEGARGVPESRFPLLGLVLDGVVRERFSEEVIWQ
LKPQRQEVRHNIQAEEMMSAKTLVGHEFTMSSPAAGFSITGQHVPQGSGRQGHFPMHFTH
TAQLPGYTLGCQNEMKSLSWLAAFLWGRGIPRRRSLRGPEGRTTTSSETKFFKKVKIEEV
SQFITLEPAFCLAFPLFTLRKSPLAATQVTVLLPLRLRGGCEDYRNLGWLMGRFSALSRK
TAVKMATKTSRRTGGFGETAHFRAVQCRAFRLLPGSTFNTVYLKIFPLAYSLAAAHFAEG
WRSDLYAPCSFRDSIVFFFTRRRYYSRRLRSHYLLYRSPVP

>gi568815586f:12535774_12737715|GENSCAN_predicted_CDS_3|2466_bp
atgtggatgggccgtaaatccagtgacaagtgtccttataagactaagggagtcagtgaa
gcaggatatttccctgaccctttcacgggactcacaacgggtgcctcatatactcagccc
accactctcaactccttgcaggagggagcatgtgagcaaatgagtgagggaactggagtg
aatgagcacgggaatcggccagctgctttggtgctagcaggagtgaactttatgcaggcc
caatggcagcatccagagttttacagtgtttgggacaaagtggttggaggcaaagtaaag
aagcccggtaaacgtggtcggaagccagccaaaattgacttgaaagcaaaacttgagagg
agccggcagagtgcaagagaatgccgagcccgaaaaaagctgagatatcagtatttggaa
gagttggtatccagtcgagaaagagctatatgtgccctcagagaggaactggaaatgctg
gcttttgctggctccccagaggagaaccaattgtgtgcatctcttcccaacttgatgttc
agtgacatcaggctgtacaggaagcatgactggggaggcctcaggaaacttacagtcatg
atggaagacaaagtgagagcaggcatcttgcatggcagcattgggaccagggatcggggg
taccacacgcttttaaataaccggatcttcagcaggctggacattaacgtattcgatgaa
gatgagaagaaagggagaattcagattccactcaaaggatgcatccctgtcccttccctc
ctcaccgacggtttacgagaacctggagccagaatcctgattaaaatccaaccacagaag
acttgccagcaagttccaatatatggcgtgctttccatagcagatctggctagtggttac
ttggaggaagcccaccaagaagtggatgacagtgtaggcagtgccttcccaagaggaggg
gaggaaatagttacaatgactgtcccagttggagccatagaaaaagagcacaggggtcac
aaagcctgcatcaaagacccacgatgccgcaatcattttcttggctttttctctggacac
cttgaagctcagaggatagacgatggtgtagaaccggtctatgcagatggagaggagaac
gtagatctggacacctggagtgagatattgaaaatatcgcacaaccttgcacgttgcact
acccagcgtccaccttccagtggtgaactggagcaggacgaaaggcgtgctggcaacgct
gatgagaaggtcagcacatgccatggagaccacaaagtagttggtggtagactgagtcct
cctactcctatggatgaccaaacaaaccagggaattgccgaagatagaaaacaaccacag
aatcccaaagaagatgctggctgtggccacttccccgggtttcagcacatagtgaagctg
ctttacacccatgagtctgtctgcccatttccccagcccaaccacttggaagcagaggat
cccaatgctcagaaacaggacgagggagcccgaggagttcctgagtctagatttcccctg
ctgggtctggttttagatggagtggttagagaaaggttctctgaagaggttatatggcag
ctgaaaccccaacgacaggaagtccgccataacattcaggcagaagaaatgatgagtgca
aagaccctggtgggccacgagttcaccatgagttcaccagctgcaggcttcagcatcaca
ggacagcatgttccccagggatcaggcagacaagggcattttcctatgcacttcacacat
acagcgcagctgccaggatatactttaggctgccaaaatgaaatgaagtcactttcttgg
ctagcggcatttctctggggccgaggaattccacgaagaagatctctgcgaggcccagaa
ggccgcacaactacttcttcagaaacaaaattttttaaaaaagtaaaaatagaggaagtc
agccagtttatcaccttggaaccagcgttttgtttggcttttccgcttttcactctacga
aaaagcccattggcggctacccaggttaccgtcctgttgccattgcgcctgcgcggcggt
tgtgaagattacagaaatctgggatggcttatgggacgcttctcagccctaagtaggaaa
acagcagtgaaaatggcaaccaaaacatcacgcaggactgggggttttggggaaacagct
cactttagagcagtgcagtgtagagctttccgtcttttaccagggtccacctttaacact
gtttatctgaaaattttccccctggcttactcgcttgcagctgcccactttgcagaagga
tggcgctctgatctctacgctccctgttccttcagggactccatagtattttttttcacg
cgtcgtcgctactacagcagacgcctgcgttctcattatttgctgtacagatctccggtg
ccttga

>gi568815586f:12535774_12737715|GENSCAN_predicted_peptide_4|179_aa
MSNVRVSNGSPSLERMDARQAEHPKPSACRNLFGPVDHEELTRDLEKHCRDMEEASQRKW
NFDFQNHKPLEGKYEWQEVEKGSLPEFYYRPPRPPKGACKVPAQESQDVSGSRPAAPLIG
APANSEDTHLVDPKTDPSDSQTGLAEQCAGIRKRPATDGNDPFPTIECVWGPALPAGGC

>gi568815586f:12535774_12737715|GENSCAN_predicted_CDS_4|540_bp
atgtcaaacgtgcgagtgtctaacgggagccctagcctggagcggatggacgccaggcag
gcggagcaccccaagccctcggcctgcaggaacctcttcggcccggtggaccacgaagag
ttaacccgggacttggagaagcactgcagagacatggaagaggcgagccagcgcaagtgg
aatttcgattttcagaatcacaaacccctagagggcaagtacgagtggcaagaggtggag
aagggcagcttgcccgagttctactacagacccccgcggccccccaaaggtgcctgcaag
gtgccggcgcaggagagccaggatgtcagcgggagccgcccggcggcgcctttaattggg
gctccggctaactctgaggacacgcatttggtggacccaaagactgatccgtcggacagc
cagacggggttagcggagcaatgcgcaggaataaggaagcgacctgcaaccgacggtaat
gaccctttcccaaccatagaatgtgtttggggccccgctttgcctgctggagggtgttaa

>gi568815586f:12535774_12737715|GENSCAN_predicted_peptide_5|118_aa
MRVRGSGAAAGARGRRAGSAARRERHDGRRAPEGRRTREGSPLSSDIPTAGEAAGYSGGE
SVCGEEWELSLLSQRRGEEEGGKFLRNRPARLRGGGAAARARELRATTATVRGAARYR

>gi568815586f:12535774_12737715|GENSCAN_predicted_CDS_5|357_bp
atgcgcgtccgaggctccggggccgcggccggagcgcggggcaggcgcgcggggagcgca
gcccggcgcgagcgccatgatggtcgccgcgcgccggagggtcggcgaactcgggaaggc
tctccccttagctccgatatccccacggccggggaggcggccggttactcaggtggagag
tccgtttgcggagaggagtgggagctttcgctgctttctcagcgcagaggagaggaggag
ggaggaaagtttctgagaaaccgcccagcccggctgcgcggcggaggcgcggccgcccgg
gcgcgggaactgcgcgcgacgacggcgacagtgcggggggctgcacgttacagatga