Result of FASTA (ccds) for pF1KB9747
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB9747, 545 aa
  1>>>pF1KB9747 545 - 545 aa - 545 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 7.2680+/-0.000832; mu= 11.3607+/- 0.050
 mean_var=138.1616+/-27.182, 0's: 0 Z-trim(112.7): 35  B-trim: 5 in 1/49
 Lambda= 0.109114
 statistics sampled from 13415 (13446) to 13415 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.744), E-opt: 0.2 (0.413), width:  16
 Scan time:  3.840

The best scores are:                                      opt bits E(32554)
CCDS11629.1 TBX4 gene_id:9496|Hs108|chr17          ( 545) 3739 599.9 2.5e-171
CCDS82180.1 TBX4 gene_id:9496|Hs108|chr17          ( 546) 3727 598.0 9.4e-171
CCDS9173.1 TBX5 gene_id:6910|Hs108|chr12           ( 518) 1710 280.5 3.4e-75
CCDS9174.1 TBX5 gene_id:6910|Hs108|chr12           ( 468) 1677 275.2 1.2e-73
CCDS13767.1 TBX1 gene_id:6899|Hs108|chr22          ( 495)  897 152.5 1.1e-36
CCDS11627.2 TBX2 gene_id:6909|Hs108|chr17          ( 712)  899 152.9 1.2e-36
CCDS13766.1 TBX1 gene_id:6899|Hs108|chr22          ( 398)  874 148.8 1.2e-35
CCDS13765.1 TBX1 gene_id:6899|Hs108|chr22          ( 372)  866 147.5 2.6e-35
CCDS9175.1 TBX3 gene_id:6926|Hs108|chr12           ( 723)  843 144.1 5.4e-34
CCDS31621.1 TBX10 gene_id:347853|Hs108|chr11       ( 385)  824 140.9 2.6e-33
CCDS10670.1 TBX6 gene_id:6911|Hs108|chr16          ( 436)  819 140.2   5e-33
CCDS43568.1 TBX20 gene_id:57057|Hs108|chr7         ( 447)  804 137.8 2.6e-32
CCDS34495.1 TBX18 gene_id:9096|Hs108|chr6          ( 607)  786 135.1 2.4e-31
CCDS81360.1 TBX15 gene_id:6913|Hs108|chr1          ( 602)  775 133.3 7.9e-31
CCDS30816.1 TBX15 gene_id:6913|Hs108|chr1          ( 496)  767 132.0 1.6e-30
CCDS14445.1 TBX22 gene_id:50945|Hs108|chrX         ( 520)  724 125.2 1.8e-28
CCDS11514.1 TBX21 gene_id:30009|Hs108|chr17        ( 535)  713 123.5 6.2e-28
CCDS5290.1 T gene_id:6862|Hs108|chr6               ( 435)  689 119.7 7.2e-27
CCDS59045.1 T gene_id:6862|Hs108|chr6              ( 377)  674 117.3 3.3e-26
CCDS55960.1 MGA gene_id:23269|Hs108|chr15          (2856)  682 119.1 6.9e-26
CCDS55959.1 MGA gene_id:23269|Hs108|chr15          (3065)  682 119.2 7.3e-26
CCDS1272.1 TBX19 gene_id:9095|Hs108|chr1           ( 448)  653 114.0 3.8e-25
CCDS63585.1 EOMES gene_id:8320|Hs108|chr3          ( 705)  654 114.3 4.8e-25
CCDS33310.1 TBR1 gene_id:10716|Hs108|chr2          ( 682)  648 113.4   9e-25
CCDS2646.1 EOMES gene_id:8320|Hs108|chr3           ( 686)  642 112.4 1.7e-24
CCDS9176.1 TBX3 gene_id:6926|Hs108|chr12           ( 743)  551 98.1 3.8e-20
CCDS63584.1 EOMES gene_id:8320|Hs108|chr3          ( 410)  544 96.8 5.1e-20


>>CCDS11629.1 TBX4 gene_id:9496|Hs108|chr17               (545 aa)
 initn: 3739 init1: 3739 opt: 3739  Z-score: 3189.3  bits: 599.9 E(32554): 2.5e-171
Smith-Waterman score: 3739; 100.0% identity (100.0% similar) in 545 aa overlap (1-545:1-545)

               10        20        30        40        50        60
pF1KB9 MLQDKGLSESEEAFRAPGPALGEASAANAPEPALAAPGLSGAALGSPPGPGADVVAAAAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 MLQDKGLSESEEAFRAPGPALGEASAANAPEPALAAPGLSGAALGSPPGPGADVVAAAAA
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB9 EQTIENIKVGLHEKELWKKFHEAGTEMIITKAGRRMFPSYKVKVTGMNPKTKYILLIDIV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 EQTIENIKVGLHEKELWKKFHEAGTEMIITKAGRRMFPSYKVKVTGMNPKTKYILLIDIV
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB9 PADDHRYKFCDNKWMVAGKAEPAMPGRLYVHPDSPATGAHWMRQLVSFQKLKLTNNHLDP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 PADDHRYKFCDNKWMVAGKAEPAMPGRLYVHPDSPATGAHWMRQLVSFQKLKLTNNHLDP
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB9 FGHIILNSMHKYQPRLHIVKADENNAFGSKNTAFCTHVFPETSFISVTSYQNHKITQLKI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 FGHIILNSMHKYQPRLHIVKADENNAFGSKNTAFCTHVFPETSFISVTSYQNHKITQLKI
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB9 ENNPFAKGFRGSDDSDLRVARLQSKEYPVISKSIMRQRLISPQLSATPDVGPLLGTHQAL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 ENNPFAKGFRGSDDSDLRVARLQSKEYPVISKSIMRQRLISPQLSATPDVGPLLGTHQAL
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB9 QHYQHENGAHSQLAEPQDLPLSTFPTQRDSSLFYHCLKRRDGTRHLDLPCKRSYLEAPSS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 QHYQHENGAHSQLAEPQDLPLSTFPTQRDSSLFYHCLKRRDGTRHLDLPCKRSYLEAPSS
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KB9 VGEDHYFRSPPPYDQQMLSPSYCSEVTPREACMYSGSGPEIAGVSGVDDLPPPPLSCNMW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 VGEDHYFRSPPPYDQQMLSPSYCSEVTPREACMYSGSGPEIAGVSGVDDLPPPPLSCNMW
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KB9 TSVSPYTSYSVQTMETVPYQPFPTHFTATTMMPRLPTLSAQSSQPPGNAHFSVYNQLSQS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 TSVSPYTSYSVQTMETVPYQPFPTHFTATTMMPRLPTLSAQSSQPPGNAHFSVYNQLSQS
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KB9 QVRERGPSASFPRERGLPQGCERKPPSPHLNAANEFLYSQTFSLSRESSLQYHSGMGTVE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS11 QVRERGPSASFPRERGLPQGCERKPPSPHLNAANEFLYSQTFSLSRESSLQYHSGMGTVE
              490       500       510       520       530       540

            
pF1KB9 NWTDG
       :::::
CCDS11 NWTDG
            

>>CCDS82180.1 TBX4 gene_id:9496|Hs108|chr17               (546 aa)
 initn: 2294 init1: 2294 opt: 3727  Z-score: 3179.0  bits: 598.0 E(32554): 9.4e-171
Smith-Waterman score: 3727; 99.8% identity (99.8% similar) in 546 aa overlap (1-545:1-546)

               10        20        30        40        50        60
pF1KB9 MLQDKGLSESEEAFRAPGPALGEASAANAPEPALAAPGLSGAALGSPPGPGADVVAAAAA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 MLQDKGLSESEEAFRAPGPALGEASAANAPEPALAAPGLSGAALGSPPGPGADVVAAAAA
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB9 EQTIENIKVGLHEKELWKKFHEAGTEMIITKAGRRMFPSYKVKVTGMNPKTKYILLIDIV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 EQTIENIKVGLHEKELWKKFHEAGTEMIITKAGRRMFPSYKVKVTGMNPKTKYILLIDIV
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB9 PADDHRYKFCDNKWMVAGKAEPAMPGRLYVHPDSPATGAHWMRQLVSFQKLKLTNNHLDP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 PADDHRYKFCDNKWMVAGKAEPAMPGRLYVHPDSPATGAHWMRQLVSFQKLKLTNNHLDP
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB9 FGHIILNSMHKYQPRLHIVKADENNAFGSKNTAFCTHVFPETSFISVTSYQNHKITQLKI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 FGHIILNSMHKYQPRLHIVKADENNAFGSKNTAFCTHVFPETSFISVTSYQNHKITQLKI
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB9 ENNPFAKGFRGSDDSDLRVARLQSKEYPVISKSIMRQRLISPQLSATPDVGPLLGTHQAL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 ENNPFAKGFRGSDDSDLRVARLQSKEYPVISKSIMRQRLISPQLSATPDVGPLLGTHQAL
              250       260       270       280       290       300

              310       320       330       340        350         
pF1KB9 QHYQHENGAHSQLAEPQDLPLSTFPTQRDSSLFYHCLKRR-DGTRHLDLPCKRSYLEAPS
       :::::::::::::::::::::::::::::::::::::::: :::::::::::::::::::
CCDS82 QHYQHENGAHSQLAEPQDLPLSTFPTQRDSSLFYHCLKRRADGTRHLDLPCKRSYLEAPS
              310       320       330       340       350       360

     360       370       380       390       400       410         
pF1KB9 SVGEDHYFRSPPPYDQQMLSPSYCSEVTPREACMYSGSGPEIAGVSGVDDLPPPPLSCNM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 SVGEDHYFRSPPPYDQQMLSPSYCSEVTPREACMYSGSGPEIAGVSGVDDLPPPPLSCNM
              370       380       390       400       410       420

     420       430       440       450       460       470         
pF1KB9 WTSVSPYTSYSVQTMETVPYQPFPTHFTATTMMPRLPTLSAQSSQPPGNAHFSVYNQLSQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 WTSVSPYTSYSVQTMETVPYQPFPTHFTATTMMPRLPTLSAQSSQPPGNAHFSVYNQLSQ
              430       440       450       460       470       480

     480       490       500       510       520       530         
pF1KB9 SQVRERGPSASFPRERGLPQGCERKPPSPHLNAANEFLYSQTFSLSRESSLQYHSGMGTV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS82 SQVRERGPSASFPRERGLPQGCERKPPSPHLNAANEFLYSQTFSLSRESSLQYHSGMGTV
              490       500       510       520       530       540

     540     
pF1KB9 ENWTDG
       ::::::
CCDS82 ENWTDG
             

>>CCDS9173.1 TBX5 gene_id:6910|Hs108|chr12                (518 aa)
 initn: 1586 init1: 1297 opt: 1710  Z-score: 1463.4  bits: 280.5 E(32554): 3.4e-75
Smith-Waterman score: 1761; 54.0% identity (71.5% similar) in 554 aa overlap (7-544:1-516)

               10            20        30        40        50      
pF1KB9 MLQDKGLSESEEAF---RAP-GPALGEASAANAPEPALAAPGLSGAALGSPPGPGADVVA
             .....:.:   ..:  :   .    . :: ::.::.       :: .:      
CCDS91       MADADEGFGLAHTPLEPDAKDLPCDSKPESALGAPS------KSPSSP-----Q
                     10        20        30              40        

         60        70        80        90       100       110      
pF1KB9 AAAAEQTIENIKVGLHEKELWKKFHEAGTEMIITKAGRRMFPSYKVKVTGMNPKTKYILL
       :: ..: .:.::: :::.::: ::::.:::::::::::::::::::::::.:::::::::
CCDS91 AAFTQQGMEGIKVFLHERELWLKFHEVGTEMIITKAGRRMFPSYKVKVTGLNPKTKYILL
            50        60        70        80        90       100   

        120       130       140       150       160       170      
pF1KB9 IDIVPADDHRYKFCDNKWMVAGKAEPAMPGRLYVHPDSPATGAHWMRQLVSFQKLKLTNN
       .:::::::::::: :::: :.:::::::::::::::::::::::::::::::::::::::
CCDS91 MDIVPADDHRYKFADNKWSVTGKAEPAMPGRLYVHPDSPATGAHWMRQLVSFQKLKLTNN
           110       120       130       140       150       160   

        180       190       200       210       220       230      
pF1KB9 HLDPFGHIILNSMHKYQPRLHIVKADENNAFGSKNTAFCTHVFPETSFISVTSYQNHKIT
       :::::::::::::::::::::::::::::.::::::::::::::::.::.::::::::::
CCDS91 HLDPFGHIILNSMHKYQPRLHIVKADENNGFGSKNTAFCTHVFPETAFIAVTSYQNHKIT
           170       180       190       200       210       220   

        240       250        260       270       280       290     
pF1KB9 QLKIENNPFAKGFRGSDDSDL-RVARLQSKEYPVISKSIMRQRLISPQLSATPDVGPLLG
       :::::::::::::::::: .: :..:.:::::::. .: .::.. : .   . .   :  
CCDS91 QLKIENNPFAKGFRGSDDMELHRMSRMQSKEYPVVPRSTVRQKVASNHSPFSSESRALST
           230       240       250       260       270       280   

         300       310         320       330       340        350  
pF1KB9 THQALQHYQHENGAHSQLAEPQDL--PLSTFPTQRDSSLFYHCLKRRDGT-RHLDLPCKR
       . .  ..:: :::. .     :::  : . .:  .. : .::: ::..      : : :.
CCDS91 SSNLGSQYQCENGVSGP---SQDLLPPPNPYPLPQEHSQIYHCTKRKEEECSTTDHPYKK
           290       300          310       320       330       340

             360       370       380       390       400       410 
pF1KB9 SYLE-APSSVGEDHYFRSPPPYDQQMLSPSYCSEVTPREACMYSGSGPEIAGVSGVDDLP
        :.: .::   :: ..::  : .:: :. :: .: . :.::::..:.:    : ...:. 
CCDS91 PYMETSPSE--EDSFYRSSYP-QQQGLGASYRTESAQRQACMYASSAPPSEPVPSLEDI-
                350        360       370       380       390       

             420          430       440       450       460        
pF1KB9 PPPLSCNMWTSVSPYTS---YSVQTMETVPYQPFPTHFTATTMMPRLPTLSAQSSQPPGN
           ::: : :.  :.:    .:: :. .::: : .:::.  ..:::  .. ..:   :.
CCDS91 ----SCNTWPSMPSYSSCTVTTVQPMDRLPYQHFSAHFTSGPLVPRLAGMANHGSPQLGE
            400       410       420       430       440       450  

      470        480       490       500       510       520       
pF1KB9 AHFSVYNQLS-QSQVRERGPSASFPRERGLPQGCERKPPSPHLNAANEFLYSQTFSLSRE
       . :.  .... :  ::. ::      . :: .    .::        :::::.  .. : 
CCDS91 GMFQHQTSVAHQPVVRQCGP------QTGLQSPGTLQPP--------EFLYSH--GVPRT
            460       470             480               490        

        530         540      
pF1KB9 -SSLQYHS--GMGTVENWTDG 
        :  ::::  :.: : .:.:  
CCDS91 LSPHQYHSVHGVGMVPEWSDNS
        500       510        

>>CCDS9174.1 TBX5 gene_id:6910|Hs108|chr12                (468 aa)
 initn: 1564 init1: 1275 opt: 1677  Z-score: 1435.9  bits: 275.2 E(32554): 1.2e-73
Smith-Waterman score: 1726; 57.3% identity (73.8% similar) in 492 aa overlap (64-544:1-466)

            40        50        60        70        80        90   
pF1KB9 LAAPGLSGAALGSPPGPGADVVAAAAAEQTIENIKVGLHEKELWKKFHEAGTEMIITKAG
                                     .:.::: :::.::: ::::.::::::::::
CCDS91                               MEGIKVFLHERELWLKFHEVGTEMIITKAG
                                             10        20        30

           100       110       120       130       140       150   
pF1KB9 RRMFPSYKVKVTGMNPKTKYILLIDIVPADDHRYKFCDNKWMVAGKAEPAMPGRLYVHPD
       :::::::::::::.:::::::::.:::::::::::: :::: :.::::::::::::::::
CCDS91 RRMFPSYKVKVTGLNPKTKYILLMDIVPADDHRYKFADNKWSVTGKAEPAMPGRLYVHPD
               40        50        60        70        80        90

           160       170       180       190       200       210   
pF1KB9 SPATGAHWMRQLVSFQKLKLTNNHLDPFGHIILNSMHKYQPRLHIVKADENNAFGSKNTA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::.:::::::
CCDS91 SPATGAHWMRQLVSFQKLKLTNNHLDPFGHIILNSMHKYQPRLHIVKADENNGFGSKNTA
              100       110       120       130       140       150

           220       230       240       250        260       270  
pF1KB9 FCTHVFPETSFISVTSYQNHKITQLKIENNPFAKGFRGSDDSDL-RVARLQSKEYPVISK
       :::::::::.::.:::::::::::::::::::::::::::: .: :..:.:::::::. .
CCDS91 FCTHVFPETAFIAVTSYQNHKITQLKIENNPFAKGFRGSDDMELHRMSRMQSKEYPVVPR
              160       170       180       190       200       210

            280       290       300       310         320       330
pF1KB9 SIMRQRLISPQLSATPDVGPLLGTHQALQHYQHENGAHSQLAEPQDL--PLSTFPTQRDS
       : .::.. : .   . .   :  . .  ..:: :::. .     :::  : . .:  .. 
CCDS91 STVRQKVASNHSPFSSESRALSTSSNLGSQYQCENGVSG---PSQDLLPPPNPYPLPQEH
              220       230       240          250       260       

              340        350        360       370       380        
pF1KB9 SLFYHCLKRRDGT-RHLDLPCKRSYLE-APSSVGEDHYFRSPPPYDQQMLSPSYCSEVTP
       : .::: ::..      : : :. :.: .::   :: ..::  : .:: :. :: .: . 
CCDS91 SQIYHCTKRKEEECSTTDHPYKKPYMETSPSE--EDSFYRSSYP-QQQGLGASYRTESAQ
       270       280       290         300        310       320    

      390       400       410       420          430       440     
pF1KB9 REACMYSGSGPEIAGVSGVDDLPPPPLSCNMWTSVSPYTS---YSVQTMETVPYQPFPTH
       :.::::..:.:    : ...:.     ::: : :.  :.:    .:: :. .::: : .:
CCDS91 RQACMYASSAPPSEPVPSLEDI-----SCNTWPSMPSYSSCTVTTVQPMDRLPYQHFSAH
          330       340            350       360       370         

         450       460       470        480       490       500    
pF1KB9 FTATTMMPRLPTLSAQSSQPPGNAHFSVYNQLS-QSQVRERGPSASFPRERGLPQGCERK
       ::.  ..:::  .. ..:   :.. :.  .... :  ::. ::      . :: .    .
CCDS91 FTSGPLVPRLAGMANHGSPQLGEGMFQHQTSVAHQPVVRQCGP------QTGLQSPGTLQ
     380       390       400       410       420             430   

          510       520       530         540      
pF1KB9 PPSPHLNAANEFLYSQTFSLSRESSLQYHS--GMGTVENWTDG 
       ::        :::::.    .  :  ::::  :.: : .:.:  
CCDS91 PP--------EFLYSHGVPRTL-SPHQYHSVHGVGMVPEWSDNS
                   440        450       460        

>>CCDS13767.1 TBX1 gene_id:6899|Hs108|chr22               (495 aa)
 initn: 924 init1: 392 opt: 897  Z-score: 772.0  bits: 152.5 E(32554): 1.1e-36
Smith-Waterman score: 897; 47.6% identity (69.8% similar) in 315 aa overlap (16-320:60-362)

                              10        20        30        40     
pF1KB9                MLQDKGLSESEEAFRAPGPALGEASAANAPEPALAAPGLSGAALG
                                     ::::     .   ::     : : . .: .
CCDS13 AASPGADPYGPREPPPPPPRYDPCAAAAPGAPGPPPPPHAYPFAP-----AAGAATSAAA
      30        40        50        60        70             80    

          50        60            70        80        90       100 
pF1KB9 SPPGPGADVVAAAAA----EQTIENIKVGLHEKELWKKFHEAGTEMIITKAGRRMFPSYK
        : ::::. .::: :    .  . ...: :. : :: .:.. :::::.:::::::::...
CCDS13 EPEGPGASCAAAAKAPVKKNAKVAGVSVQLEMKALWDEFNQLGTEMIVTKAGRRMFPTFQ
           90       100       110       120       130       140    

             110       120         130       140       150         
pF1KB9 VKVTGMNPKTKYILLIDIVPADDHRYK--FCDNKWMVAGKAEPAMPGRLYVHPDSPATGA
       ::. ::.: . :.::.:.::.::.::.  : ...:.:::::.:: :::.. :::::: ::
CCDS13 VKLFGMDPMADYMLLMDFVPVDDKRYRYAFHSSSWLVAGKADPATPGRVHYHPDSPAKGA
          150       160       170       180       190       200    

     160       170       180       190       200          210      
pF1KB9 HWMRQLVSFQKLKLTNNHLDPFGHIILNSMHKYQPRLHIVKAD---ENNAFGSKNTAFCT
       .::.:.:::.::::::: ::  :::::::::.::::.:.: .:   ... .. .:  : :
CCDS13 QWMKQIVSFDKLKLTNNLLDDNGHIILNSMHRYQPRFHVVYVDPRKDSEKYAEEN--FKT
          210       220       230       240       250         260  

        220       230       240       250        260       270     
pF1KB9 HVFPETSFISVTSYQNHKITQLKIENNPFAKGFRGSDDSDL-RVARLQSKEYPVISKSIM
        :: :: : .::.::::.:::::: .::::::::  :  :  :  :      :..: .. 
CCDS13 FVFEETRFTAVTAYQNHRITQLKIASNPFAKGFRDCDPEDWPRNHR--PGALPLMS-AFA
            270       280       290       300         310          

         280       290       300       310       320       330     
pF1KB9 RQRLISPQLSATPDVGPLLGTHQALQHYQHENGAHSQLAEPQDLPLSTFPTQRDSSLFYH
       :.:  .:  : :   :    . .: ...:.. :. . :..:   :               
CCDS13 RSR--NPVASPTQPSGTEKDAAEARREFQRDAGGPAVLGDPAHPPQLLARVLSPSLPGAG
     320         330       340       350       360       370       

         340       350       360       370       380       390     
pF1KB9 CLKRRDGTRHLDLPCKRSYLEAPSSVGEDHYFRSPPPYDQQMLSPSYCSEVTPREACMYS
                                                                   
CCDS13 GAGGLVPLPGAPGGRPSPPNPELRLEAPGASEPLHHHPYKYPAAAYDHYLGAKSRPAPYP
       380       390       400       410       420       430       

>>CCDS11627.2 TBX2 gene_id:6909|Hs108|chr17               (712 aa)
 initn: 887 init1: 671 opt: 899  Z-score: 771.4  bits: 152.9 E(32554): 1.2e-36
Smith-Waterman score: 899; 57.9% identity (76.7% similar) in 240 aa overlap (17-254:53-290)

                             10        20        30        40      
pF1KB9               MLQDKGLSESEEAFRAPGPALGEASAANAPEPALAAPGLSGAALGS
                                     : :.:. :.:: :   : :  ::  .::: 
CCDS11 DFPMSAFLAAAQPSFFPALALPPGALAKPLPDPGLAGAAAAAAAAAAAAEAGLHVSALGP
             30        40        50        60        70        80  

          50        60         70        80        90       100    
pF1KB9 -PPGPGADVVAAAAAEQTIEN-IKVGLHEKELWKKFHEAGTEMIITKAGRRMFPSYKVKV
        ::.     . .   :. .:.  :: :. :::: .::. ::::.:::.:::::: .::.:
CCDS11 HPPAAHLRSLKSLEPEDEVEDDPKVTLEAKELWDQFHKLGTEMVITKSGRRMFPPFKVRV
             90       100       110       120       130       140  

          110       120       130       140       150       160    
pF1KB9 TGMNPKTKYILLIDIVPADDHRYKFCDNKWMVAGKAEPAMPGRLYVHPDSPATGAHWMRQ
       .:.. :.:::::.::: ::: :::: ...:::::::.: :: :.:.:::::::: .:: .
CCDS11 SGLDKKAKYILLMDIVAADDCRYKFHNSRWMVAGKADPEMPKRMYIHPDSPATGEQWMAK
            150       160       170       180       190       200  

          170       180       190       200       210       220    
pF1KB9 LVSFQKLKLTNNHLDPFGHIILNSMHKYQPRLHIVKADENNAFGSKNTAFCTHVFPETSF
        :.:.:::::::  :  :  :::::::::::.:::.:  :. .    ..: :.:::::.:
CCDS11 PVAFHKLKLTNNISDKHGFTILNSMHKYQPRFHIVRA--NDILKLPYSTFRTYVFPETDF
            210       220       230         240       250       260

          230       240       250       260       270       280    
pF1KB9 ISVTSYQNHKITQLKIENNPFAKGFRGSDDSDLRVARLQSKEYPVISKSIMRQRLISPQL
       :.::.::: :::::::.::::::::: . .                              
CCDS11 IAVTAYQNDKITQLKIDNNPFAKGFRDTGNGRREKRKQLTLPSLRLYEEHCKPERDGAES
              270       280       290       300       310       320

>>CCDS13766.1 TBX1 gene_id:6899|Hs108|chr22               (398 aa)
 initn: 898 init1: 392 opt: 874  Z-score: 753.8  bits: 148.8 E(32554): 1.2e-35
Smith-Waterman score: 874; 50.0% identity (70.2% similar) in 292 aa overlap (16-297:60-339)

                              10        20        30        40     
pF1KB9                MLQDKGLSESEEAFRAPGPALGEASAANAPEPALAAPGLSGAALG
                                     ::::     .   ::     : : . .: .
CCDS13 AASPGADPYGPREPPPPPPRYDPCAAAAPGAPGPPPPPHAYPFAP-----AAGAATSAAA
      30        40        50        60        70             80    

          50        60            70        80        90       100 
pF1KB9 SPPGPGADVVAAAAA----EQTIENIKVGLHEKELWKKFHEAGTEMIITKAGRRMFPSYK
        : ::::. .::: :    .  . ...: :. : :: .:.. :::::.:::::::::...
CCDS13 EPEGPGASCAAAAKAPVKKNAKVAGVSVQLEMKALWDEFNQLGTEMIVTKAGRRMFPTFQ
           90       100       110       120       130       140    

             110       120         130       140       150         
pF1KB9 VKVTGMNPKTKYILLIDIVPADDHRYK--FCDNKWMVAGKAEPAMPGRLYVHPDSPATGA
       ::. ::.: . :.::.:.::.::.::.  : ...:.:::::.:: :::.. :::::: ::
CCDS13 VKLFGMDPMADYMLLMDFVPVDDKRYRYAFHSSSWLVAGKADPATPGRVHYHPDSPAKGA
          150       160       170       180       190       200    

     160       170       180       190       200          210      
pF1KB9 HWMRQLVSFQKLKLTNNHLDPFGHIILNSMHKYQPRLHIVKAD---ENNAFGSKNTAFCT
       .::.:.:::.::::::: ::  :::::::::.::::.:.: .:   ... .. .:  : :
CCDS13 QWMKQIVSFDKLKLTNNLLDDNGHIILNSMHRYQPRFHVVYVDPRKDSEKYAEEN--FKT
          210       220       230       240       250         260  

        220       230       240       250        260       270     
pF1KB9 HVFPETSFISVTSYQNHKITQLKIENNPFAKGFRGSDDSDL-RVARLQSKEYPVISKSIM
        :: :: : .::.::::.:::::: .::::::::  :  :  :  :      :..: .. 
CCDS13 FVFEETRFTAVTAYQNHRITQLKIASNPFAKGFRDCDPEDWPRNHR--PGALPLMS-AFA
            270       280       290       300         310          

         280       290       300       310       320       330     
pF1KB9 RQRLISPQLSATPDVGPLLGTHQALQHYQHENGAHSQLAEPQDLPLSTFPTQRDSSLFYH
       :.:  .:  : :   :   : :                                      
CCDS13 RSR--NPVASPTQPSGTEKGGHVLKDKEVKAETSRNTPEREVELLRDAGGCVNLGLPCPA
     320         330       340       350       360       370       

>>CCDS13765.1 TBX1 gene_id:6899|Hs108|chr22               (372 aa)
 initn: 644 init1: 394 opt: 866  Z-score: 747.4  bits: 147.5 E(32554): 2.6e-35
Smith-Waterman score: 866; 50.0% identity (70.3% similar) in 290 aa overlap (16-295:60-337)

                              10        20        30        40     
pF1KB9                MLQDKGLSESEEAFRAPGPALGEASAANAPEPALAAPGLSGAALG
                                     ::::     .   ::     : : . .: .
CCDS13 AASPGADPYGPREPPPPPPRYDPCAAAAPGAPGPPPPPHAYPFAP-----AAGAATSAAA
      30        40        50        60        70             80    

          50        60            70        80        90       100 
pF1KB9 SPPGPGADVVAAAAA----EQTIENIKVGLHEKELWKKFHEAGTEMIITKAGRRMFPSYK
        : ::::. .::: :    .  . ...: :. : :: .:.. :::::.:::::::::...
CCDS13 EPEGPGASCAAAAKAPVKKNAKVAGVSVQLEMKALWDEFNQLGTEMIVTKAGRRMFPTFQ
           90       100       110       120       130       140    

             110       120         130       140       150         
pF1KB9 VKVTGMNPKTKYILLIDIVPADDHRYK--FCDNKWMVAGKAEPAMPGRLYVHPDSPATGA
       ::. ::.: . :.::.:.::.::.::.  : ...:.:::::.:: :::.. :::::: ::
CCDS13 VKLFGMDPMADYMLLMDFVPVDDKRYRYAFHSSSWLVAGKADPATPGRVHYHPDSPAKGA
          150       160       170       180       190       200    

     160       170       180       190       200          210      
pF1KB9 HWMRQLVSFQKLKLTNNHLDPFGHIILNSMHKYQPRLHIVKAD---ENNAFGSKNTAFCT
       .::.:.:::.::::::: ::  :::::::::.::::.:.: .:   ... .. .:  : :
CCDS13 QWMKQIVSFDKLKLTNNLLDDNGHIILNSMHRYQPRFHVVYVDPRKDSEKYAEEN--FKT
          210       220       230       240       250         260  

        220       230       240       250        260       270     
pF1KB9 HVFPETSFISVTSYQNHKITQLKIENNPFAKGFRGSDDSDL-RVARLQSKEYPVISKSIM
        :: :: : .::.::::.:::::: .::::::::  :  :  :  :      :..: .. 
CCDS13 FVFEETRFTAVTAYQNHRITQLKIASNPFAKGFRDCDPEDWPRNHR--PGALPLMS-AFA
            270       280       290       300         310          

         280       290       300       310       320       330     
pF1KB9 RQRLISPQLSATPDVGPLLGTHQALQHYQHENGAHSQLAEPQDLPLSTFPTQRDSSLFYH
       :.:  .:  : :   :   :                                        
CCDS13 RSR--NPVASPTQPSGTEKGLVTEGSGLQPGLLDVLLKPPSKKSESLRPPHCKDT     
     320         330       340       350       360       370       

>>CCDS9175.1 TBX3 gene_id:6926|Hs108|chr12                (723 aa)
 initn: 860 init1: 646 opt: 843  Z-score: 723.7  bits: 144.1 E(32554): 5.4e-34
Smith-Waterman score: 857; 52.4% identity (71.8% similar) in 273 aa overlap (17-278:42-308)

                             10        20        30            40  
pF1KB9               MLQDKGLSESEEAFRAPGPALGEASAANAPEP-ALAAP---GLSGA
                                     :. .:   .::    : ::: :    : ::
CCDS91 GTSMAYHPFLPHRAPDFAMSAVLGHQPPFFPALTLPPNGAAALSLPGALAKPIMDQLVGA
              20        30        40        50        60        70 

                 50          60         70        80        90     
pF1KB9 ALGSPP----GPGADV--VAAAAAEQTIEN-IKVGLHEKELWKKFHEAGTEMIITKAGRR
       :  . :    :: : .  . .   :. .:.  :: :. :::: .::. ::::.:::.:::
CCDS91 AETGIPFSSLGPQAHLRPLKTMEPEEEVEDDPKVHLEAKELWDQFHKRGTEMVITKSGRR
              80        90       100       110       120       130 

         100       110       120       130       140       150     
pF1KB9 MFPSYKVKVTGMNPKTKYILLIDIVPADDHRYKFCDNKWMVAGKAEPAMPGRLYVHPDSP
       ::: .::. .:.. :.:::::.::. ::: :::: ...:::::::.: :: :.:.:::::
CCDS91 MFPPFKVRCSGLDKKAKYILLMDIIAADDCRYKFHNSRWMVAGKADPEMPKRMYIHPDSP
             140       150       160       170       180       190 

         160       170       180       190       200       210     
pF1KB9 ATGAHWMRQLVSFQKLKLTNNHLDPFGHIILNSMHKYQPRLHIVKADENNAFGSKNTAFC
       ::: .:: ..:.:.:::::::  :  :  :::::::::::.:::.:  :. .    ..: 
CCDS91 ATGEQWMSKVVTFHKLKLTNNISDKHGFTILNSMHKYQPRFHIVRA--NDILKLPYSTFR
             200       210       220       230         240         

         220       230       240       250       260       270     
pF1KB9 THVFPETSFISVTSYQNHKITQLKIENNPFAKGFRGSDDSDLRVARLQSKEYPVISKSIM
       :..:::: ::.::.::: :::::::.:::::::::  : .. :  : . :.  . :  ..
CCDS91 TYLFPETEFIAVTAYQNDKITQLKIDNNPFAKGFR--DTGNGR--REKRKQLTLQSMRVF
     250       260       270       280         290         300     

         280       290       300       310       320       330     
pF1KB9 RQRLISPQLSATPDVGPLLGTHQALQHYQHENGAHSQLAEPQDLPLSTFPTQRDSSLFYH
        .:                                                         
CCDS91 DERHKKENGTSDESSSEQAAFNCFAQASSPAASTVGTSNLKDLCPSEGESDAEAESKEEH
         310       320       330       340       350       360     

>>CCDS31621.1 TBX10 gene_id:347853|Hs108|chr11            (385 aa)
 initn: 621 init1: 395 opt: 824  Z-score: 711.4  bits: 140.9 E(32554): 2.6e-33
Smith-Waterman score: 824; 39.9% identity (63.2% similar) in 378 aa overlap (16-381:13-374)

               10        20        30        40        50        60
pF1KB9 MLQDKGLSESEEAFRAPGPALGEASAANAPEPALAAPGLSGAALGSPPGPGADVVAAAAA
                      ::. .    ..... :: :..:  ::   .:    ::..::  ..
CCDS31    MAAFLSAGLGILAPSETYPLPTTSSGWEPRLGSPFPSGPCTSST---GAQAVAEPTG
                  10        20        30        40           50    

                   70        80        90       100       110      
pF1KB9 E----QTIENIKVGLHEKELWKKFHEAGTEMIITKAGRRMFPSYKVKVTGMNPKTKYILL
       .      .  . : :. : ::..:.. :::::.::::::::: ..::. ::.  . : ::
CCDS31 QGPKNPRVSRVTVQLEMKPLWEEFNQLGTEMIVTKAGRRMFPPFQVKILGMDSLADYALL
           60        70        80        90       100       110    

        120         130       140       150       160       170    
pF1KB9 IDIVPADDHRYK--FCDNKWMVAGKAEPAMPGRLYVHPDSPATGAHWMRQLVSFQKLKLT
       .:..: ::.::.  : .. :.:::::.:: :::.. :::::: ::.::::.:::.:::::
CCDS31 MDFIPLDDKRYRYAFHSSAWLVAGKADPATPGRVHFHPDSPAKGAQWMRQIVSFDKLKLT
          120       130       140       150       160       170    

          180       190       200          210       220       230 
pF1KB9 NNHLDPFGHIILNSMHKYQPRLHIVKAD---ENNAFGSKNTAFCTHVFPETSFISVTSYQ
       :: ::  :::::::::.::::.:.: .:   ... ....:  : . .: ::.: .::.::
CCDS31 NNLLDDNGHIILNSMHRYQPRFHVVFVDPRKDSERYAQEN--FKSFIFTETQFTAVTAYQ
          180       190       200       210         220       230  

             240       250       260       270       280       290 
pF1KB9 NHKITQLKIENNPFAKGFRGSDDSDLRVARLQSKEYPVISKSIMRQRLISPQLSATPDVG
       ::.:::::: .:::::::: :: ..  ::       :. :.: .   ...   .   : .
CCDS31 NHRITQLKIASNPFAKGFRESDLDSWPVAPRPLLSVPARSHSSLSPCVLKGATDREKDPN
            240       250       260       270       280       290  

             300       310         320       330       340         
pF1KB9 PLLGTHQALQHYQHENGAHSQLAEPQDL--PLSTFPTQRDSSLFYHCLKRRDGTRHLDLP
          .. .    . :    :. :  :. :  : .  :.  .:  .:       .  :: .:
CCDS31 KASASTSKTPAWLH----HQLLPPPEVLLAPATYRPVTYQS--LYS-----GAPSHLGIP
            300           310       320         330            340 

     350        360       370       380       390       400        
pF1KB9 CKR-SYLEAPSSVGEDHYFRSPPPYDQQMLSPSYCSEVTPREACMYSGSGPEIAGVSGVD
         : .    :.  ..      : :    .:::.                           
CCDS31 RTRPAPYPLPNIRADRDQGGLPLPAGLGLLSPTVVCLGPGQDSQ                
             350       360       370       380                     

      410       420       430       440       450       460        
pF1KB9 DLPPPPLSCNMWTSVSPYTSYSVQTMETVPYQPFPTHFTATTMMPRLPTLSAQSSQPPGN




545 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 18:40:22 2016 done: Fri Nov  4 18:40:23 2016
 Total Scan time:  3.840 Total Display time:  0.090

Function used was FASTA [36.3.4 Apr, 2011]
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