GENSCAN 1.0	Date run:  4-Nov-116	Time: 18:40:49

Sequence gi568815581f:61356491_61583513 : 227023 bp : 46.75% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +  11671  11770  100  0  1   75   59    71 0.691   3.34
 1.02 Intr +  11837  12004  168  0  0  103  103   278 0.989  30.72
 1.03 Intr +  15350  15378   29  0  2   44   86    64 0.265  -0.37
 1.04 Intr +  26640  26690   51  2  0  104  100     4 0.271   2.30
 1.05 Intr +  32056  32218  163  0  1  113  116   -26 0.770   2.25
 1.06 Intr +  35487  35631  145  1  1  110   55   136 0.823  11.84
 1.07 Intr +  38104  38229  126  1  0   -8   60   149 0.643   2.29
 1.08 Intr +  39198  39366  169  0  1   -3   80    75 0.662  -2.45
 1.09 Intr +  39456  39584  129  2  0   51   81    91 0.757   5.59
 1.10 Intr +  42035  42090   56  1  2   92   96    15 0.073   0.48
 1.11 Intr +  42353  42536  184  2  1   37   91    53 0.082   0.29
 1.12 Intr +  43519  44081  563  0  2   44   75   651 0.111  51.01
 1.13 Intr +  45194  45461  268  2  1  107   69   509 0.956  48.43
 1.14 Intr +  46571  46717  147  1  0  114   91   355 0.942  38.83
 1.15 Intr +  47802  48007  206  2  2   55  100   241 0.507  20.00
 1.16 Intr +  48116  48279  164  2  2  110   78   181 0.993  18.92
 1.17 Intr +  48712  49346  635  2  2  117  110   707 0.999  67.65
 1.18 Term +  51564  52016  453  2  0  130   55   514 0.990  47.46
 1.19 PlyA +  52111  52116    6                               1.05

 2.09 PlyA -  52676  52671    6                               1.05
 2.08 Term -  56123  55870  254  0  2   43   49   192 0.265   6.60
 2.07 Intr -  56474  56132  343  2  1   75    5   172 0.244   2.60
 2.06 Intr -  56623  56512  112  0  1   22  105    65 0.230   1.98
 2.05 Intr -  63578  63476  103  0  1  108   57    28 0.161   0.93
 2.04 Intr -  75257  75129  129  0  0   59  100    29 0.107   1.87
 2.03 Intr -  77425  77300  126  2  0   41   84    90 0.018   4.55
 2.02 Intr -  90883  90806   78  2  0  122   68    25 0.112   3.42
 2.01 Init -  93801  93789   13  0  1   45  115    -6 0.045  -1.72
 2.00 Prom -  93888  93849   40                              -4.86

 3.00 Prom +  96946  96985   40                              -6.66
 3.01 Init +  98745  98825   81  2  0   75   97    66 0.661   7.17
 3.02 Intr +  99998 100186  189  1  0   95   91   287 0.745  29.48
 3.03 Intr + 100510 100698  189  0  0   28   69   104 0.828   2.28
 3.04 Intr + 101047 101141   95  0  2   96   76   162 0.474  14.56
 3.05 Intr + 109329 109448  120  0  0   80  115   199 0.966  21.41
 3.06 Intr + 111020 111167  148  2  1   93   77   137 0.984  13.34
 3.07 Intr + 122137 122289  153  0  0   73   87   200 0.996  18.67
 3.08 Intr + 123391 123479   89  0  2  138   59   147 0.993  15.57
 3.09 Intr + 123600 123829  230  0  2  108   75   138 0.999  12.01
 3.10 Intr + 126410 126831  422  0  2   58   57   311 0.220  18.66
 3.11 Intr + 127948 128083  136  0  1   64  105    47 0.436   4.14
 3.12 Intr + 134187 134307  121  1  1   57   50    61 0.412  -1.25
 3.13 Intr + 134572 134666   95  1  2  111   97    35 0.942   6.31
 3.14 Term + 138236 138414  179  0  2  103   43    95 0.449   4.35
 3.15 PlyA + 139332 139337    6                               1.05

 4.06 PlyA - 139883 139878    6                               1.05
 4.05 Term - 141033 140931  103  2  1   86   54   113 0.359   5.45
 4.04 Intr - 147510 147327  184  1  1   64   -1   111 0.012  -1.35
 4.03 Intr - 153278 153223   56  1  2  111   92    13 0.039   2.62
 4.02 Intr - 193517 193390  128  2  2   67   53    43 0.011  -1.82
 4.01 Intr - 225464 225392   73  1  1   55   86    78 0.211   3.71

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init + 133640 133850  211  1  1   54   80   122 0.865   6.95


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815581f:61356491_61583513|GENSCAN_predicted_peptide_1|1251_aa
MSYFSCATQSVGGVLPSYRKATMDPGYGEERVGGTFDRSVTLLEVCGSWPEGFGLRHMSS
MEHTEEGLRERLADAMAESPSRDVVGSGTGSLRMLKFEKGGGGERGASLPQSQGPKRSVY
FSIVVHIFSKKIPQCFSFQKGKKKEKKNNANSPASVSNPTVTKHAFGMEEELQREGSIET
LSNSSGSTSGSIPRNFDGYRSPLPTNESQPLSLFPTGFPGPLGIHVTYRFSRHYLVNGQL
YYGLPLNLMKEKYLHDLERGRDGEGGGGTAGARIVARRHRAAPGNPDPLPAKAFPNANPE
PVNAPASPPLPHRRPSQTSITTISPPCTSNARRCTDVHLTSADQVSQAYSGHPRNRGPGP
KTTFRNQPECSRPSPIGSRRRALPRDEKKLKKWLAGRREEAGISEEGDFRLRYRIGRKFV
GSRVENPGSARAVPPCAQRKSRVPLAVRRTGSPEEQLLRPPPGSSVHRARRRPGRGSEPR
APGPGPGPRAPGPDVPMREPALAASAMAYHPFHAPRPADFPMSAFLAAAQPSFFPALALP
PGALAKPLPDPGLAGAAAAAAAAAAAAEAGLHVSALGPHPPAAHLRSLKSLEPEDEVEDD
PKVTLEAKELWDQFHKLGTEMVITKSGRRMFPPFKVRVSGLDKKAKYILLMDIVAADDCR
YKFHNSRWMVAGKADPEMPKRMYIHPDSPATGEQWMAKPVAFHKLKLTNNISDKHGFTIL
NSMHKYQPRFHIVRANDILKLPYSTFRTYVFPETDFIAVTAYQNDKAGGYQVDAPRVFPL
RPAPADLGVPPTTLEEPRPDLAPPPWSPQITQLKIDNNPFAKGFRDTGNGRREKRKQLTL
PSLRLYEEHCKPERDGAESDASSCDPPPAREPPTSPGAAPSPLRLHRARAEEKSCAADSD
PEPERLSEERAGAPLGRSPAPDSASPTRLTEPERARERRSPERGKEPAESGGDGPFGLRS
LEKERAEARRKDEGRKEAAEGKEQGLAPLVVQTDSASPLGAGHLPGLAFSSHLHGQQFFG
PLGAGQPLFLHPGQFTMGPGAFSAMGMGHLLASVAGGGNGGGGGPGTAAGLDAGGLGPAA
SAASTAAPFPFHLSQHMLASQGIPMPTFGGLFPYPYTYMAAAAAAASALPATSAAAAAAA
AAGSLSRSPFLGSARPRLRFSPYQIPVTIPPSTSLLTTGLASEGSKAAGGNSREPSPLPE
LALRKVGAPSRGALSPSGSAKEAANELQSIQRLVSGLESQRALSPGRESPK

>gi568815581f:61356491_61583513|GENSCAN_predicted_CDS_1|3756_bp
atgagctatttctcctgcgctacccagtctgttggcggcgtgcttccatcctacaggaag
gctacaatggaccctgggtatggagaggagcgggtgggaggtacctttgacaggagcgtg
accctgctggaggtgtgcgggagctggcctgagggcttcgggctgcggcacatgtcctcc
atggagcacacggaggagggcctccgggagcgacttgccgacgccatggccgagtcacct
agccgggacgtcgtgggatccggaacaggatccctgcgcatgctgaagtttgagaaggga
gggggcggggagaggggcgcctccttgccgcagtcccagggccccaagagatcagtgtac
ttctcaatcgttgtccatatcttttccaaaaagattcctcaatgcttttcttttcaaaag
ggaaaaaaaaaggaaaaaaaaaacaatgccaacagcccagcgtccgtgagcaacccaaca
gtaacaaagcatgcgttcgggatggaggaagaacttcagcgagagggaagcatcgagact
ctgagtaacagctcaggctccaccagcggcagcataccaagaaactttgatggctaccga
tctccgctgcccaccaatgagagccagcccctcagcctcttcccgactggcttcccggga
cctttaggaatccatgtgacctaccgattctctcggcactacctggtcaacgggcagctt
tactacggacttcctctcaatttgatgaaggaaaaataccttcatgatctggaaagaggc
cgggatggggagggcggaggcggcacagctggagcccggattgtggcacgccgtcaccgt
gctgctccggggaatcccgacccgctccctgcgaaagcgtttccgaacgcgaacccagag
cctgtgaacgcgccggcaagccccccactcccccaccgccgcccgtcgcagacatccata
accacgatctcgcctccatgcacatccaacgcacgacggtgcacagacgtgcacctgact
tctgcggaccaggtgtctcaagcgtacagcggccacccgcggaaccgcggcccggggcca
aaaacgaccttcaggaatcagcctgagtgttcgcgcccgagcccgattggaagcaggaga
cgtgcgcttccgagagatgagaagaaactaaaaaagtggttggcagggcgaagagaggaa
gccggtatttcggaagaaggagactttcgtctccggtaccggatagggcgaaaattcgtt
gggtcgcgggtggagaatccggggtccgcccgcgcggtgccgccctgtgctcagcgaaag
agccgggtgccccttgcggtgcgccggacgggaagccccgaggagcagctgctgcgcccg
ccacccgggtcgtccgtccaccgcgcgcgccgccgcccgggccgggggtccgagccgcgc
gcccccggccccggccccggcccccgggcgcctgggccggatgtcccgatgagagagccg
gcgctggcggccagcgccatggcttaccacccgttccacgcgccacggcccgccgacttc
cccatgtccgcctttctggcggcggcgcagccctccttcttcccggcactcgcgctgccg
cccggcgcgctggccaagccgctgcccgacccgggcctggcgggggcggcggccgcggcg
gcggcggcggcagcagcggccgaggcggggctgcacgtctcggcactgggcccgcacccg
cccgccgcgcatctgcgctccctcaagagcctggagcccgaggacgaggtggaggacgac
cccaaggtgacgctggaggccaaggagctgtgggaccagttccacaagctaggcacggag
atggtcatcaccaagtccgggaggcggatgttcccccccttcaaggtgcgagtcagcggc
ctggacaagaaggccaagtatatcctgctgatggacattgtagccgctgacgattgccgc
tataagttccacaactcgcgctggatggtggcgggcaaggccgaccctgagatgcccaaa
cgcatgtacatccacccagacagcccagccacgggggagcagtggatggctaagcctgtg
gccttccacaagctgaagctgaccaacaacatctctgacaagcacggcttcaccatccta
aactccatgcacaagtaccagccgcgcttccacatagtgcgagccaacgacatcctgaag
ctgccttacagcaccttccgcacctacgtgttcccggagaccgacttcatcgccgtcact
gcctaccagaatgacaaggcgggtgggtaccaagtggacgctccccgggtcttccctctg
cggccagcacccgctgacctcggggtgccaccgaccacgctggaagagccacggcctgac
ttagcgccgcccccttggtccccgcagatcacacagctgaagatcgacaacaacccgttt
gccaagggcttccgggacaccgggaacggccggcgggagaaaaggaagcagctgacgctg
ccgtctctacgcttgtacgaggagcactgcaaacccgagcgcgatggcgcggagtcagac
gcctcgtcgtgcgaccctccccccgcgcgggaaccacccacctccccgggcgcagcgccc
agtccgctgcgcctgcaccgggcccgagctgaggagaagtcgtgcgccgcggacagcgac
ccggagcctgagcggttgagcgaggagcgtgcgggggcgccgctaggccgcagcccggct
ccagacagcgccagccccactcgcttgaccgaacccgagcgcgcccgggagcggcgtagt
cccgagaggggcaaggagccggccgagagcggcggggacggcccgttcggcctgaggagc
ctggagaaggagcgcgccgaagctcggaggaaggacgaggggcgcaaggaggcggccgag
ggcaaggagcagggcctggcgccgctggtggtgcagacagacagtgcgtcccccctgggc
gccggacacctgcccggcctggccttttccagccacttgcacgggcagcagttctttggg
ccgctgggagccggccagccgctcttcctgcaccctggacagttcaccatgggccctggc
gccttctccgccatgggcatgggtcacctactggcctcggtggcaggcggcggcaacggc
ggaggtggcgggcctgggaccgccgcggggctggacgcaggcgggctgggtcccgcggcc
agcgcagcaagcaccgccgcgcccttcccgttccacctctcccagcacatgctggcatct
cagggaattccaatgcccactttcggaggcctcttcccctacccctacacctacatggca
gcagcagccgcagccgcctcggctttgcccgccactagtgctgcagctgccgccgccgca
gccgccggctccctctcccggagccccttcctgggcagtgcccggccccgactgcgtttc
agcccctatcagatcccggtcaccatcccgcctagcactagcctcctcaccaccgggctg
gcctctgagggctccaaggccgctggtggaaacagccgggagcctagccccctgcccgag
ctggctctccgcaaagtaggggccccatcccgcggtgccctgtcgcccagtggctcggcc
aaggaggcggccaatgaactgcagagcatccagagactggtgagtgggctggagagccag
cgagccctctccccaggccgggagtcgcccaagtga

>gi568815581f:61356491_61583513|GENSCAN_predicted_peptide_2|385_aa
MEGTGLLLSGRTRNFQVEGTEDWAAFISELDIIENVRKAYRYSCGQHRREKEDTVMFIYS
TENQAIGEAGQQLMMMNKVVTLENCVSSEKELVSSENKMIYGFLSYAKNIPSESASPVLA
NKLPFFFSLSWISVRTTEGFLTNMSRGQLRPRPEEPDEGGEEGGSEPRGPSPLEERWIPA
DPSPIPPGRAPRALRMPATAPFGGAQEAGGRRLTSRRENARAQPRGRAEEDKLGSAAAWK
VAELALPGGSGSRGEGPTPSLKPSAQCVRSPGVPRSLGGLCRAPDPALPVSVAVPPCPAC
RVYLPLSPEAGCEAAARALACSAISWTCEELPRPEAWAGSGFAPTRAPGGELRELPRGLA
GKPGAAVSAGNRCFRSGFGVPGPIQ

>gi568815581f:61356491_61583513|GENSCAN_predicted_CDS_2|1158_bp
atggaagggacaggccttctcctgtcaggcagaaccagaaacttccaggtagaaggaact
gaggactgggctgccttcatctctgagctggatattattgaaaatgtcagaaaggcctac
agatactcctgtgggcaacacaggagagaaaaagaggacacagttatgtttatctatagc
acagaaaatcaagctattggagaagctggacagcagttgatgatgatgaacaaggtggtg
actttggagaattgtgtatcaagtgagaaagaactggtgtcaagtgagaacaaaatgata
tatggctttctttcatatgcaaaaaatataccttcagagtctgccagtcctgtgcttgcc
aataaactgccctttttcttcagcttgagttggatttctgtccgtacgactgaaggattc
ctgactaatatgtccagaggccagctgagaccccgccctgaagagccggatgagggtggt
gaggagggcgggtcggagccgagggggccctctccgctggaggagcgctggatccccgcc
gatccttcccctatcccgcccggccgtgcgccccgcgcgctgcggatgccagccacagcc
cccttcggaggggcccaggaggccggaggccggcggctcacttcccgcagagagaacgcg
agggcccagccccgcgggcgcgcagaagaggacaagctggggtctgcagcagcctggaag
gtcgccgagctggcgctgccgggcggttctggcagcaggggagaaggccccaccccgagc
ctcaagccctccgctcagtgtgtccgcagccccggagtccctcggtccctcggcggcctg
tgccgggctccggacccggctctgcctgtgtcggtggctgtgcctccgtgccccgcttgc
cgggtctatctcccgctctcgcccgaggcgggctgtgaggccgcggcccgggccctggcc
tgcagcgccatctcgtggacctgtgaggagttgccgaggcccgaggcctgggcgggctct
gggttcgctcccactcgtgctcccggcggggagctgcgggagctgccaagaggactcgct
gggaaaccaggcgcggccgtcagcgctggaaatcggtgcttccggagtgggtttggggtc
cccggccccatccaatag

>gi568815581f:61356491_61583513|GENSCAN_predicted_peptide_3|748_aa
MRRPLNKMGERPEPGDAPGGPGESGKKEMLQDKGLSESEEAFRAPGPALGEASAANAPEP
ALAAPGLSGAALGSPPGPGADVVAAAAAEQRAWDPTARGQEEATPPVRTGAAAGIRGLWD
VAEGFTVIIGRSQRTGCRLGICVHYLQARAWPRTIENIKVGLHEKELWKKFHEAGTEMII
TKAGRRMFPSYKVKVTGMNPKTKYILLIDIVPADDHRYKFCDNKWMVAGKAEPAMPGRLY
VHPDSPATGAHWMRQLVSFQKLKLTNNHLDPFGHIILNSMHKYQPRLHIVKADENNAFGS
KNTAFCTHVFPETSFISVTSYQNHKITQLKIENNPFAKGFRGSDDSDLRVARLQSKEYPV
ISKSIMRQRLISPQLSATPDVGPLLGTHQALQHYQHENGAHSQLAEPQDLPLSTFPTQRD
SSLFYHCLKRRDGTRHLDLPCKRSYLEAPSSVGEDHYFRSPPPYDQQMLSPSYCSEVTPR
EACMYSGSGPEIAGVSGVDDLPPPPLSCNMWTSVSPYTSYSVQTMETVPYQPFPTHFTAT
TMMPRLPTLSAQSSQPPGNAHFSVYNQLSQSQEATLELMSGISRACSALRKSTLLERERP
TEIKIVEKNLFLPVNSAAGTCTGHQTAEEEPLVSLPEDKLLSKTSVSACANINLRHRVPG
RTVPSRALWNWELIENGEANGQRVFGGLVVKPPLPDAKVQIYVRLGAQGQRQESDAGEFL
PGPPSPLSAPHCQGFGAHPGHRTAFKDT

>gi568815581f:61356491_61583513|GENSCAN_predicted_CDS_3|2247_bp
atgaggaggcctctgaacaagatgggcgagaggcctgagcccggggatgctccgggaggg
cccggggagagcgggaagaaggagatgctgcaggataagggcctgtccgagagcgaggag
gccttccgggccccgggcccagcgctcggagaggccagcgcagccaacgcccccgagccc
gcgctggcagcgccgggcctcagcggagccgcgctaggcagccccccgggacccggggcc
gacgtcgtcgccgccgccgccgcggagcagagggcctgggacccaacggcgagggggcag
gaggaggccaccccgccggtgcgcacgggagccgctgcggggatccgaggcctctgggac
gtcgccgagggcttcacagtgataatcggacgatcacagcgcacgggatgccgcctgggg
atctgtgtgcactatctgcaggcgcgcgcctggccgaggaccatcgagaacatcaaggtg
gggctgcatgagaaggagctctggaagaagttccacgaggcgggcaccgagatgatcatc
actaaggctggcaggaggatgttccccagctacaaggtaaaagtcacaggcatgaacccc
aagaccaagtatatcctgctgattgacattgtccctgccgatgaccatcgctacaagttc
tgtgacaacaaatggatggtggcagggaaggctgagccagccatgccaggaaggctgtat
gtccacccggattctcctgccacaggagcccactggatgcggcagctggtctccttccag
aagctgaagctgacaaacaaccacctggacccctttggccatatcatcctcaactctatg
cacaagtaccagccgcggctccacatcgttaaggctgatgagaacaatgctttcggctcc
aaaaacactgctttctgcacccacgtgttcccagagacctccttcatctctgtgacctcc
taccagaatcacaagatcacccagctgaaaattgagaacaacccttttgccaagggattc
cggggcagtgatgacagtgacctgcgtgtggcccgactgcagagcaaagaataccccgtg
atttccaaaagcatcatgaggcagaggctcatctccccccagctctcagccacaccggac
gtgggccccctgctcggcacccaccaggcactccagcactaccagcacgagaacggggca
cactcacagctcgcggagccgcaggacctgcccctcagcacctttcccacccagagggac
tcaagcctcttctatcactgcctgaaaagacgagacggtacccgccacctggacttacct
tgcaagcgatcctatctggaagccccctcttcggtgggggaggatcactatttccgttcc
ccccctccctacgaccagcaaatgctgagcccctcctactgcagtgaggtgacccccaga
gaagcatgtatgtactcaggttcagggcccgagattgccggggtgtctggggtggacgac
ctgcccccacctccgctgagctgtaacatgtggacttcagtgtcgccgtacaccagctat
agcgtgcagacgatggagactgtgccgtaccagcccttccccacgcacttcaccgccacc
accatgatgccgcggctgcccaccctctccgctcagagctcccagccaccaggaaatgcc
cactttagtgtctacaatcagctctcccagtctcaggaggccacactggagctgatgtct
ggcatctccagggcctgttctgctctcagaaaatctacgcttctggagcgagaaaggcca
acagaaataaagatagttgaaaaaaatttgtttcttccagtaaattcagccgcaggtacc
tgcacgggccatcagacagcagaggaggagccactcgtcagcctgcctgaagataagcta
ttgagcaagacaagtgtctcagcatgtgctaatataaacctccggcatcgggtgccaggc
aggacagtcccaagtagggctctttggaattgggagctgatcgaaaacggggaggccaat
ggccagagggtctttggaggcttggttgttaagcctcctttaccagacgccaaagtccag
atctacgtgcggttaggtgcacaaggccagcggcaggagagtgacgctggggaattcctg
cctggtcctcccagccctctgagcgccccccactgccaggggtttggggctcatccagga
cacaggacagcattcaaggacacttag

>gi568815581f:61356491_61583513|GENSCAN_predicted_peptide_4|181_aa
XALKIVDENEKHSVYRKKIMLLNGKQWGGGGATGIYWVEARDAAEHLLMARTTSHNKELS
SQTWVVPRLHYPYWHVRYMWLTYVSLLYSYLLKKVNYRIASGRPFRVIPEGVVIIEDDST
LCVIAPEDLPVGQDVKVEDSDIDDPDPVPGCSLSWELLPTLMETASRTGFIDAAFKAKAA
I

>gi568815581f:61356491_61583513|GENSCAN_predicted_CDS_4|546_bp
nnggcattaaaaattgtggatgaaaatgaaaaacattctgtataccgaaagaaaataatg
ctgctaaatggtaagcaatggggtggtggtggtgctactggcatctattgggtagaggcc
agagatgctgctgaacatcttctcatggccaggacaacctcccacaacaaagaattatcc
agtcaaacatgggtagtaccaaggctgcactatccttactggcatgttcgttacatgtgg
ctcacctacgtaagtctattgtactcctacttattaaaaaaagttaattatagaatagcc
tcaggcaggcccttcagagttattccagaaggtgttgttatcatagaagatgatagcacc
ctgtgtgttattgcccctgaggaccttccagtgggacaagacgtgaaggtggaagacagt
gatattgatgatcctgaccctgtgcctggctgctccctcagctgggagctgctgcccact
cttatggaaactgcatccaggacaggctttattgatgctgccttcaaagccaaggcggcc
atctga