GENSCAN 1.0	Date run:  4-Nov-116	Time: 18:37:19

Sequence gi568815584f:76339354_76598914 : 259561 bp : 48.08% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   3141   3294  154  2  1   74   18   174 0.052   9.16
 1.02 Term +  10962  11098  137  1  2   59   54   102 0.216   2.08
 1.03 PlyA +  11904  11909    6                               1.05

 2.00 Prom +  11972  12011   40                              -4.26
 2.01 Init +  35119  35277  159  0  0   41   85   128 0.317   7.62
 2.02 Intr +  36514  36609   96  0  0   66   59    58 0.131   0.91
 2.03 Intr +  42685  42825  141  0  0   36   80   115 0.146   6.05
 2.04 Intr +  57346  57455  110  0  2  119   18    36 0.421  -1.22
 2.05 Intr +  57834  58092  259  0  1   94   80    72 0.525   4.47
 2.06 Intr +  64254  64353  100  2  1   65   83    97 0.686   6.58
 2.07 Term +  84098  84255  158  0  2   58   41   154 0.388   5.80
 2.08 PlyA +  88991  88996    6                               1.05

 3.00 Prom +  89420  89459   40                              -3.36
 3.01 Init +  95419  95456   38  0  2   85   29    72 0.591  -1.50
 3.02 Intr +  95582  95683  102  2  0  102   81    21 0.669   2.09
 3.03 Intr +  99988 100397  410  1  2  112  100   797 0.938  77.21
 3.04 Intr + 119806 119904   99  2  0  107   39    34 0.364   0.48
 3.05 Intr + 123192 123308  117  1  0   97  116   197 0.999  23.84
 3.06 Intr + 124975 125079  105  2  0   87   30    95 0.424   3.79
 3.07 Intr + 142663 142773  111  2  0  109   84   127 0.994  14.75
 3.08 Intr + 143245 143406  162  2  0   87   99   231 0.645  24.05
 3.09 Intr + 152094 152363  270  1  0  142  107   648 0.990  69.61
 3.10 Intr + 155277 155462  186  1  0   92   61    40 0.363   1.36
 3.11 Intr + 158861 159099  239  0  2   96   70   515 0.799  47.83
 3.12 Intr + 160203 160351  149  2  2   78   91    36 0.610   1.93
 3.13 Intr + 172560 172635   76  0  1   69   83   100 0.557   7.12
 3.14 Intr + 173047 173202  156  0  0   42  111    67 0.916   4.61
 3.15 Term + 176663 176761   99  1  0   79   49    41 0.447  -2.57
 3.16 PlyA + 176867 176872    6                               1.05

 4.00 Prom + 179519 179558   40                              -3.16
 4.01 Init + 197438 197587  150  1  0  115   80   112 0.506  11.35
 4.02 Intr + 201299 201412  114  1  0   56   75    40 0.223   0.14
 4.03 Intr + 216412 216448   37  0  1   93   92    26 0.150   1.34
 4.04 Intr + 223519 223725  207  2  0   52   49    91 0.042   0.65
 4.05 Intr + 225705 225733   29  1  2  114   82   -12 0.651  -1.37
 4.06 Term + 230115 230219  105  2  0  135   49    55 0.871   4.71
 4.07 PlyA + 230503 230508    6                               1.05

 5.00 Prom + 234881 234920   40                              -2.76
 5.01 Sngl + 253739 254284  546  1  0   65   45   186 0.344   8.10
 5.02 PlyA + 255152 255157    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl +  27063  27464  402  2  0   66   45   170 0.896   6.77


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815584f:76339354_76598914|GENSCAN_predicted_peptide_1|96_aa
MLMLVLPLAAAVVISTRSGEEPEAQTGKERNGRGCLLKVIGYGAKDFWFEFENTVLDTEQ
FKTALALEKFATFLERQDICLRMFVHPEKCQQAEGV

>gi568815584f:76339354_76598914|GENSCAN_predicted_CDS_1|291_bp
atgctgatgctggtgctcccacttgcagctgctgtggtcatctccactcgttcaggtgag
gagcctgaagctcagacaggcaaagagaggaacgggcgtggctgtctgcttaaggttata
ggctatggagccaaagacttctggtttgaatttgaaaacactgtgctggacacagaacaa
ttcaaaacagcccttgccctcgagaagtttgctaccttcctagagagacaggacatatgc
ctgcgaatgtttgtacatccagaaaaatgtcagcaagctgaaggggtttga

>gi568815584f:76339354_76598914|GENSCAN_predicted_peptide_2|340_aa
MPSLEAKDWGLFPNCNNGTLDVHFTNRSLAAVCLENGFQQGRKDAEKPVTEVLTHLAVGH
SPPPPFNCEKAGLRALTPSTPTAQESVKPFCAANKAPVVEDVSEPRNIKSRVHPKRVSTV
GNLCVHMCECVPCTCYQACASACSRTNPDRGLARRLNFRRLNSRSQRWRAFGFRSQIDLH
LQRLPVGPEPPILQMPQEGACRGDPGPPSGQDPSQRHPAGQSPRASLGSRTSWSDRSDFP
SLPSDATHAKQPKRQRDPAQLYISLLHEAPVPSEVVPESAREVEVVTGDSLNQDDQNSIE
TDGKVDPLRTFVGSTGPQGLCGFCSWGAGGLLFSDLDPVL

>gi568815584f:76339354_76598914|GENSCAN_predicted_CDS_2|1023_bp
atgccttccttggaggccaaggactggggcctttttcctaattgcaacaacgggacattg
gatgtgcattttacaaatcgctccctggctgctgtgtgcctggagaatggatttcagcag
ggcagaaaggatgccgaaaaaccagtcactgaggtcctgacccacctggcggttggacat
tcccccccacccccctttaactgcgagaaggcaggccttagggctctaacacccagtact
cctactgctcaggagagtgtcaagcccttctgtgctgccaataaagcccctgttgtagag
gatgtttctgaacctcgaaacatcaaaagccgtgtccaccccaagagagtttccaccgtg
ggaaacctgtgtgtgcacatgtgtgaatgtgttccgtgcacatgctaccaagcctgtgcc
tctgcctgcagcaggacaaacccagacagaggcttagcccggaggctcaacttccggagg
ctcaactcccggagccagcgctggcgggccttcggattcaggtcacagatagacttgcac
ctccagaggctgcctgtggggcctgagccccccatcttacagatgcctcaggagggggct
tgtagaggtgacccaggaccccctagcggccaagaccccagtcaacggcacccagcaggc
cagtcccccagggccagtctgggcagcagaacctcctggagtgaccgctctgactttcct
tctctgccctctgatgctacccacgcaaaacagccaaagcgccagagagaccctgctcag
ctctacatttccttgctgcacgaggccccggtgccctcagaggtggtccctgagagtgcc
agagaggtggaggtggtgacaggtgactctttaaaccaggatgatcagaattcgatcgaa
actgatggcaaggtggatcctttaagaacttttgtgggctccactggaccccaggggctc
tgtgggttctgctcctggggcgctggtggactcctcttctcggaccttgatcctgtcctg
tga

>gi568815584f:76339354_76598914|GENSCAN_predicted_peptide_3|772_aa
MRSLPGAALAQAWTQVNGTGSELQPFPSPRTQVNGTGSELQPFPSVRLLNRMSSDDRHLG
SSCGSFIKTEPSSPSSGIDALSHHSPSGSSDASGGFGLALGTHANGLDSPPMFAGAGLGG
TPCRKSYEDCASGIMEDSAIKCEYMLNAIPKRLCLVCGDIASGYHYGVASCEACKAFFKR
TIQDEKNLFTSGVAGNMKSLGSVKQSCGCSLTSIRQWNIEYSCPATNECEITKRRRKSCQ
ACRFMKCLKVGMLKEGPSEDKGPDLRRFVNTTWTIMCYRNWTFHFRLPFPGVRLDRVRGG
RQKYKRRLDSESSPYLSLQISPPAKKPLTKIVSYLLVAEPDKLYAMPPPGMPEGDIKALT
TLCDLADRELVVIIGWAKHIPGFSSLSLGDQMSLLQSAWMEILILGIVYRSLPYDDKLVY
AEDYIMDEEHSRLAGLLELYRAILQLVRRYKKLKVEKEEFVTLKALALANSGFDKCIMTC
FYNDVSYKIASRPCASPTQRGAFEPGIAEGFEVLSGGGGAKAVKAEEARCTKPDSMYIED
LEAVQKLQDLLHEALQDYELSQRHEEPWRTGKLLLTLPLLRQTAAKAVQHFYSVKLQGKV
PMHKLFLEMLEAKHHATGLVYQCHRRGALLPHLGYQRFGVAPLGTASTPALWQDPCSPPG
CARSSCGDVFSVLSIGMELPSKAQLQVRFYTFGMFVDHGDGDCSQHNVYFSSTVKEGNRQ
SPEVASHGSSRPAKKSAGHQRGEQQADRSAVHITSVTARDPTLFVQQYLTSQ

>gi568815584f:76339354_76598914|GENSCAN_predicted_CDS_3|2319_bp
atgaggtccctgcctggagcagctcttgcccaggcctggactcaagtgaatgggacaggc
tctgagctccagccttttccttctccgaggactcaagtgaatgggacaggctctgagctc
cagccttttccttctgtaaggctgctgaacaggatgtcctcggacgacaggcacctgggc
tccagctgcggctccttcatcaagactgagccgtccagcccgtcctcgggcatcgatgcc
ctcagccaccacagccccagtggctcgtccgacgccagcggcggctttggcctggccctg
ggcacccacgccaacggtctggactcgccacccatgtttgcaggcgccgggctgggaggc
accccatgccgcaagagctacgaggactgtgccagcggcatcatggaggactcggccatc
aagtgcgagtacatgctcaacgccatccccaagcgcctgtgcctcgtgtgcggggacatt
gcctctggctaccactacggcgtggcctcctgcgaggcttgcaaggccttcttcaagagg
actatccaagatgagaaaaatctgtttacctccggggttgctgggaacatgaaatccttg
ggatctgtaaagcagagctgtggctgctccctgacaagcattcgccagtggaacattgag
tacagctgcccggccaccaacgagtgcgagatcaccaaacggaggcgcaagtcctgccag
gcctgccgcttcatgaaatgcctcaaagtggggatgctgaaggaagggccctctgaagat
aagggcccagacctaagacgctttgtcaatacaacttggaccatcatgtgctatagaaat
tggaccttccacttccgtttaccatttccaggtgtgcgccttgatcgagtgcgtggaggc
cgtcagaaatacaagcgacggctggactcagagagcagcccatacctgagcttacaaatt
tctccacctgctaaaaagccattgaccaagattgtctcatacctactggtggctgagccg
gacaagctctatgccatgcctccccctggtatgcctgagggggacatcaaggccctgacc
actctctgtgacctggcagaccgagagcttgtggtcatcattggctgggccaagcacatc
ccaggcttctcaagcctctccctgggggaccagatgagcctgctgcagagtgcctggatg
gaaatcctcatcctgggcatcgtgtaccgctcgctgccctatgacgacaagctggtgtac
gctgaggactacatcatggatgaggagcactcccgcctcgcggggctgctggagctctac
cgggccatcctgcagctggtacgcaggtacaagaagctcaaggtggagaaggaggagttt
gtgacgctcaaggccctggccctcgccaactccggttttgacaaatgcataatgacatgt
ttctacaatgacgtatcatacaaaatagcatcaaggccctgtgcttcacctacacagagg
ggagcatttgaaccaggcattgcagagggcttcgaggttctgtcaggtggaggaggagca
aaagcagttaaagcagaggaagccaggtgcacaaagccagattccatgtacatcgaggat
ctagaggctgtccagaagctgcaggacctgctgcacgaggcactgcaggactacgagctg
agccagcgccatgaggagccctggaggacgggcaagctgctgctgacactgccgctgctg
cggcagacggccgccaaggccgtgcagcacttctatagcgtcaaactgcagggcaaagtg
cccatgcacaaactcttcctggagatgctggaggccaagcatcatgccacagggctagtg
taccagtgccacaggaggggtgccctcctaccacacttgggctaccagaggtttggtgta
gctcccctgggcaccgcgagcacgccagctctctggcaggacccctgcagtccccctggc
tgtgccagaagtagctgtggggacgtcttcagtgtgctaagcatcggcatggagctgcct
tcaaaggcacagctgcaggtgaggttttatacttttggtatgtttgttgatcacggtgat
ggtgattgctctcaacacaatgtctacttctcctcgacggtcaaggagggaaatagacag
agcccagaggtggccagtcatggttcctcaagacctgccaagaagagtgcaggccaccag
cgtggggagcagcaggcagataggtccgcagttcacataacctccgtaactgcccgtgat
ccaacgctgtttgtccaacagtatttaacaagtcagtaa

>gi568815584f:76339354_76598914|GENSCAN_predicted_peptide_4|213_aa
MEQGAALVGEARAAQEPTEAGEGSGMAGFSPEGCPAGRQLRPGEKSSTAQMLKETSHTCA
SHLNRTGHLSKSIRYLACQVLTFSDLYEKISPKYPNLNNHDPLLAPLSLPEDRHTFTQGS
QAELPVLPVPTQLSSARGHESGVRVANVSLYFITHMRHLITSLLDSGQRGQELRGEASQV
WNSNLLYSRGFGALIQSTNNNNNSKRKSRASYT

>gi568815584f:76339354_76598914|GENSCAN_predicted_CDS_4|642_bp
atggagcagggggcggcgctcgtcggggaggctcgggctgcacaggaacccacggaggcg
ggggaaggctcaggcatggcaggcttcagtcccgagggctgccccgcgggaaggcagcta
aggcccggcgagaaatcgagcacagcgcagatgctgaaggaaacaagccacacctgtgcg
tcccatctcaacagaactgggcacctgtcaaaatccatccgctacttagcttgtcaagtt
ttgaccttctctgacctctatgagaaaatatctcccaaataccccaatttgaataaccac
gatcccctccttgctcctctgagtctgcccgaggacagacacaccttcacccagggcagc
caagcagagctacccgtgctgcctgtacctacacagctgtcatctgcccgtgggcatgag
agtggggtccgtgtggccaatgtctccttgtattttattactcacatgcgacacttaatt
accagccttctggattctggacaaagaggtcaggaactcaggggagaggcctcccaggtt
tggaattcaaatttactctactcccgtggttttggagctctaatccaatcaactaacaac
aacaacaacagcaaaaggaagtctagggccagttatacctaa

>gi568815584f:76339354_76598914|GENSCAN_predicted_peptide_5|181_aa
MGACVKGTESPPRSRNLSPDQVVCESSQPVIVLLSSSKQWEQRPSRNQFRTNAPGHQSPF
VSKREKPPETHQNQGYQQHAVTWVDIGITHLQGLIHASEGGKMLLAHTEVPRGVLNGHFW
VGMRLKEGPGTTLIPKLHKSPMGLCPAECLMTLGMQCVCHAGEAQSEGGALTSSWSALWA
V

>gi568815584f:76339354_76598914|GENSCAN_predicted_CDS_5|546_bp
atgggagcatgtgtgaaaggcaccgagtcacctcctaggtcccgtaacctgtcccctgac
caggttgtctgtgagtccagtcagccagtgattgtcttattgtcctcatcaaagcaatgg
gaacaaaggccttctagaaaccagttcaggacaaacgcccctggacatcaaagtcccttt
gtgtctaagagagagaagcccccagaaacccatcagaaccagggctaccagcagcacgca
gtcacgtgggtggatattggtatcacccacctgcaaggcttgattcatgcttctgaaggt
ggcaaaatgctcctggcccacacagaagtccctcggggagtgttgaatggccacttttgg
gtcgggatgaggctgaaggagggccctggaacaactctcatccccaaactccacaagtct
cctatgggtctgtgtccagcagaatgtctcatgacccttgggatgcagtgtgtatgccat
gctggtgaagctcagagtgagggtggggctctcacctcttcatggtctgctctttgggct
gtgtga