GENSCAN 1.0	Date run:  4-Nov-116	Time: 18:32:31

Sequence gi568815590f:54358139_54559992 : 201854 bp : 41.19% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   1679   1684    6  1  0   85   97    11 0.424   2.00
 1.02 Term +   6475   6699  225  0  0  104   43   216 0.961  14.50
 1.03 PlyA +   7988   7993    6                               1.05

 2.00 Prom +  12993  13032   40                              -4.75
 2.01 Init +  16700  16754   55  1  1   27   98    35 0.398  -0.10
 2.02 Intr +  17653  17713   61  2  1  124  103     0 0.561   1.97
 2.03 Intr +  21075  21154   80  0  2   97   70   198 0.978  17.18
 2.04 Intr +  22587  22750  164  1  2   80   40   100 0.427   3.17
 2.05 Term +  24888  25043  156  2  0   66   49   128 0.357   3.65
 2.06 PlyA +  25236  25241    6                               1.05

 3.02 PlyA -  26184  26179    6                               1.05
 3.01 Sngl -  29473  29018  456  1  0   51   49   296 0.803  17.93
 3.00 Prom -  36048  36009   40                              -8.25

 4.03 PlyA -  36108  36103    6                               1.05
 4.02 Term -  38719  38585  135  1  0   49   37   105 0.285  -1.46
 4.01 Init -  39531  39364  168  0  0   70   89   118 0.567   9.68
 4.00 Prom -  57191  57152   40                              -6.55

 5.04 PlyA -  57968  57963    6                               1.05
 5.03 Term -  61092  60998   95  1  2  107   32    66 0.415  -0.09
 5.02 Intr -  66534  66390  145  0  1   -7   72   187 0.752   6.53
 5.01 Init -  67648  67508  141  1  0   32  111    92 0.955   6.08
 5.00 Prom -  85078  85039   40                              -4.85

 6.00 Prom +  91819  91858   40                              -3.75
 6.01 Init +  95661  95682   22  2  1   47   49    52 0.163  -2.82
 6.02 Intr +  95730  95816   87  1  0   87   54   132 0.376   8.72
 6.03 Intr +  96265  96448  184  2  1  110   76   114 0.660  10.32
 6.04 Term +  96454  96601  148  1  1    1   53   190 0.451   3.19
 6.05 PlyA +  97170  97175    6                               1.05

 7.00 Prom +  99448  99487   40                              -9.15
 7.01 Init + 100001 100307  307  1  1   89   92   454 0.830  43.40
 7.02 Term + 100920 101857  938  1  2   93   48  1069 0.999  94.68
 7.03 PlyA + 102215 102220    6                               1.05

 8.04 PlyA - 102309 102304    6                               1.05
 8.03 Term - 109294 108650  645  1  0   14   54   371 0.827  19.43
 8.02 Intr - 111799 111662  138  1  0  -32  115   175 0.659   7.94
 8.01 Init - 112288 111833  456  1  0   81   65   223 0.886  13.59
 8.00 Prom - 116196 116157   40                              -8.35

 9.05 PlyA - 116415 116410    6                               1.05
 9.04 Term - 117178 116985  194  2  2   92   43   134 0.784   5.90
 9.03 Intr - 119280 119068  213  1  0   68   32   149 0.431   5.06
 9.02 Intr - 119534 119385  150  0  0   39   18   154 0.280   2.71
 9.01 Init - 120216 120156   61  0  1   92   94    24 0.836   4.86
 9.00 Prom - 127926 127887   40                              -4.35

10.10 PlyA - 128365 128360    6                               1.05
10.09 Term - 132362 132207  156  2  0   44   49   164 0.872   5.05
10.08 Intr - 138610 138301  310  0  1   25   59   158 0.067   1.99
10.07 Intr - 148564 148491   74  1  2   76   63    49 0.001  -1.51
10.06 Intr - 151470 151290  181  2  1    5   66   139 0.050   2.35
10.05 Intr - 151760 151706   55  0  1  110   52    73 0.088   3.02
10.04 Intr - 165164 164649  516  0  0   71   78   296 0.335  18.90
10.03 Intr - 167160 166983  178  0  1   64   28   126 0.745   2.77
10.02 Intr - 184661 184582   80  0  2   55   89    61 0.016   1.25
10.01 Init - 193320 193209  112  0  1   82   75   112 0.652   9.73

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl - 121691 121425  267  2  0   60   47   239 0.974  12.00


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815590f:54358139_54559992|GENSCAN_predicted_peptide_1|76_aa
MASCPYTNPFKASGYLQVSAKTPGMADNSLHFGPYANCGCFSAAKSWLPPPSTRGRVAME
LLQLKLRAHPAYVSGT

>gi568815590f:54358139_54559992|GENSCAN_predicted_CDS_1|231_bp
atggcctcatgcccttacacaaatcctttcaaagcctctggttacctgcaggtatctgcc
aaaacccctgggatggcagacaacagccttcactttgggccctatgcaaactgtggctgc
ttctctgcagccaagtcctggctccctcctccttcaaccaggggcagagttgccatggag
ctcctgcaacttaagttgagagcccatccggcatatgtgtccggcacctaa

>gi568815590f:54358139_54559992|GENSCAN_predicted_peptide_2|171_aa
MGAEEDREPEELFVSGYKGPGIHYSTFCLYEFDHSRVIIIWTALKPGKQQTLLDREISDG
KQHQEITSEGDTLTIVCFIDEDTAKDLRASHSSRLSELEVECVSTLRSTPTPFCFLLSLN
KVEHSQQPAPRSQRFNPTVTRNALKLSASRSGSFWQAAVPRDVDFDAVWTP

>gi568815590f:54358139_54559992|GENSCAN_predicted_CDS_2|516_bp
atgggggctgaggaagacagggaaccagaagagctttttgtttctggctataaaggccct
ggcatccactattctactttctgtctctatgagtttgaccactctagagtcatcataatc
tggactgcactgaaacctggaaaacaacagacgctgttggatcgggaaatatctgacggc
aaacagcaccaggagattaccagtgagggagatactctcaccatcgtctgtttcatagat
gaggacactgccaaggatttgcgtgcatcacacagctcacggctgtcagagctggaagtg
gagtgcgtttccaccttgagaagcacaccaacacctttttgttttcttctgtctttaaac
aaagttgaacactctcagcaacctgctcccagaagtcagaggtttaatccaacagttacc
agaaatgctcttaaactttctgcttccaggtcaggaagtttttggcaggccgctgttccc
agggacgtggactttgatgcagtgtggactccttaa

>gi568815590f:54358139_54559992|GENSCAN_predicted_peptide_3|151_aa
MNDKKVKQTYCSYEENFSGLDRRSNQLQHSLNPNPHLKSKALALFNSLNTKRDEEAAEEK
LKASRVCFMKFKNRSHLCNIKVQSEAAHTDGEAAAGYPEDLGKIIDEGSYTKQQIFSVDK
KAFYWKKMPSRIFIARQETSMPDFKGQAGSH

>gi568815590f:54358139_54559992|GENSCAN_predicted_CDS_3|456_bp
atgaatgataagaaagtgaaacagacttattgctcatatgaagaaaattttagtggcctg
gatagaagatcaaaccagctacaacattccctgaatccaaaccctcatctcaagagcaaa
gccctagctctctttaattccttgaatactaagagagatgaggaagctgcagaggaaaag
ttgaaagctagcagagtttgcttcatgaaatttaagaacagaagccatctctgtaacata
aaagtgcaaagtgaagcagcacatactgatggagaagctgcagcaggttatccagaagat
ctaggaaagatcattgatgaaggtagctacaccaaacaacagattttcagtgtagacaaa
aaagccttttattggaagaagatgccatctaggattttcatagctagacaggagacatca
atgcctgacttcaaaggacaggctggctctcattaa

>gi568815590f:54358139_54559992|GENSCAN_predicted_peptide_4|100_aa
MVQTHILHREKGKPWPTGKQGHWVKELRGHRVGCVKNKSKCEDEEKECSSKVSQTVEISQ
ELLWVSTAGDFRANTPRGSSPSFDKDGHNGLRVLRQLFVM

>gi568815590f:54358139_54559992|GENSCAN_predicted_CDS_4|303_bp
atggttcagactcacattctgcaccgtgagaaagggaagccatggcccactggaaagcaa
ggtcactgggtcaaggagctaagaggtcacagagtcggatgtgtcaagaataaaagcaaa
tgtgaggatgaagagaaagaatgcagttccaaagtttcacaaacagtggaaatctcacaa
gagttgctctgggtttccacagctggagacttccgagctaacactccacggggcagttca
ccttcttttgacaaagatggccataatggcctcagagtcttgaggcagctttttgtcatg
taa

>gi568815590f:54358139_54559992|GENSCAN_predicted_peptide_5|126_aa
MSESSGIFELIRIIDKEIHSSSFSVDSLQPCFIAQDNTSQELYSINLNSGIPKRPAGINY
HTLALVVTEQGDLRDGGVQDSTHIHRNVVDAASKEGQVPHVQMATSSSRLGFSHFANPAE
GTLADQ

>gi568815590f:54358139_54559992|GENSCAN_predicted_CDS_5|381_bp
atgtcagagagcagtggcatatttgagctgataagaattatcgataaggaaattcactcc
agcagcttctctgtggactccctgcagccttgcttcattgctcaagacaatacaagtcag
gaattgtacagtatcaacttgaactcaggaatccccaagcgtccagcaggcatcaactat
cacactctggccctggtggtgacagagcagggagacctaagagatggcggggtccaggat
tccactcacatccacaggaatgtggtagatgctgccagcaaggagggccaagtccctcat
gtccagatggccaccagcagctccaggctcggattctcccattttgcaaacccagcagaa
ggaactcttgctgaccagtag

>gi568815590f:54358139_54559992|GENSCAN_predicted_peptide_6|146_aa
MHAPVIGVLTGRGRRSSGAPQGLDRTRTAASAGLRPDLLSSANPDLPRCPRVLPDRLECP
SSSPCFPSIENTKACRKSPSLCLVTQGPTDKRGSDSSSPTVRHLPELISAPADQRPQLAT
GTASWCASRFLAQPLEPRVRPKDPGT

>gi568815590f:54358139_54559992|GENSCAN_predicted_CDS_6|441_bp
atgcatgctccggtcatcggggtcctcacggggagaggccggcgcagcagtggagcaccg
caggggctggatcggacccgcactgcagcatctgcagggctccgacctgacttgctctcc
agcgccaacccggatctgcctaggtgcccacgggtccttcccgatcgacttgagtgtcct
tcctccagcccctgctttcccagcatcgaaaacacaaaagcctgccggaaatcacccagc
ctttgcctggtcactcaggggcccacggataagcgtggctctgattcctccagccccacg
gttcgccacctacccgagttaatttctgcgcccgctgaccaaaggccccaactggcaacg
ggcacagcttcttggtgcgctagtcgcttccttgcccagcctttagagcctcgggtccgg
cccaaggacccggggacgtga

>gi568815590f:54358139_54559992|GENSCAN_predicted_peptide_7|414_aa
MSSPDAGYASDDQSQTQSALPAVMAGLGPCPWAESLSPIGDMKVKGEAPANSGAPAGAAG
RAKGESRIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALTLAEKRPFVEE
AERLRVQHMQDHPNYKYRPRRRKQVKRLKRVEGGFLHGLAEPQAAALGPEGGRVAMDGLG
LQFPEQGFPAGPPLLPPHMGGHYRDCQSLGAPPLDGYPLPTPDTSPLDGVDPDPAFFAAP
MPGDCPAAGTYSYAQVSDYAGPPEPPAGPMHPRLGPEPAGPSIPGLLAPPSALHVYYGAM
GSPGAGGGRGFQMQPQHQHQHQHQHHPPGPGQPSPPPEALPCRDGTDPSQPAELLGEVDR
TEFEQYLHFVCKPEMGLPYQGHDSGVNLPDSHGAISSVVSDASSAVYYCNYPDV

>gi568815590f:54358139_54559992|GENSCAN_predicted_CDS_7|1245_bp
atgagcagcccggatgcgggatacgccagtgacgaccagagccagacccagagcgcgctg
cccgcggtgatggccgggctgggcccctgcccctgggccgagtcgctgagccccatcggg
gacatgaaggtgaagggcgaggcgccggcgaacagcggagcaccggccggggccgcgggc
cgagccaagggcgagtcccgtatccggcggccgatgaacgctttcatggtgtgggctaag
gacgagcgcaagcggctggcgcagcagaatccagacctgcacaacgccgagttgagcaag
atgctgggcaagtcgtggaaggcgctgacgctggcggagaagcggcccttcgtggaggag
gcagagcggctgcgcgtgcagcacatgcaggaccaccccaactacaagtaccggccgcgg
cggcgcaagcaggtgaagcggctgaagcgggtggagggcggcttcctgcacggcctggct
gagccgcaggcggccgcgctgggccccgagggcggccgcgtggccatggacggcctgggc
ctccagttccccgagcagggcttccccgccggcccgccgctgctgcctccgcacatgggc
ggccactaccgcgactgccagagtctgggcgcgcctccgctcgacggctacccgttgccc
acgcccgacacgtccccgctggacggcgtggaccccgacccggctttcttcgccgccccg
atgcccggggactgcccggcggccggcacctacagctacgcgcaggtctcggactacgct
ggccccccggagcctcccgccggtcccatgcacccccgactcggcccagagcccgcgggt
ccctcgattccgggcctcctggcgccacccagcgcccttcacgtgtactacggcgcgatg
ggctcgcccggggcgggcggcgggcgcggcttccagatgcagccgcaacaccagcaccag
caccagcaccagcaccaccccccgggccccggacagccgtcgccccctccggaggcactg
ccctgccgggacggcacggaccccagtcagcccgccgagctcctcggggaggtggaccgc
acggaatttgaacagtatctgcacttcgtgtgcaagcctgagatgggcctcccctaccag
gggcatgactccggtgtgaatctccccgacagccacggggccatttcctcggtggtgtcc
gacgccagctccgcggtatattactgcaactatcctgacgtgtga

>gi568815590f:54358139_54559992|GENSCAN_predicted_peptide_8|412_aa
MRGLRACSRDLRLAAGAGQAWGSAGRGRRGPAPRGQTGTQGVGSGGSGAGVRPEPCAGQR
PAGGKALRGEGQAQAAQGYAAANGWGTVLVSGLVPQDPRAAPPPGGRQLLLLRPPRWVPS
CFPNSQSADISQEDRKPAKRRPTHFYHPDEHSSSDPISLRLSGQISPPGQNQLLRSQPYD
MRVPEVPISHPRRPALAQPLALDLRPTWKAPDARLALGSARGPGRRLALHLQVPEGARQL
GPRTGAQPSRHRRQRAPGLALVVTGVSRIRPAHGAPGLPRAPKPSAGRGGKEGGERGTEM
LRRLRGSPRPNRHPRSGPVPAHGVASAAAGPATLRAPPGRGASSETMWPTENLSSRRRAP
PQRRRTRAPSIARSLPGSGRLQGLIFPSTGKNVQRHKSPPLPSEESLSQRSR

>gi568815590f:54358139_54559992|GENSCAN_predicted_CDS_8|1239_bp
atgagggggctgcgggcttgcagtagagacctgcgcttagctgctggtgcggggcaggcc
tggggcagcgcggggcgaggaaggcggggtccggctccacgcggtcaaacggggacgcag
ggcgtgggcagtggtggcagtggagcgggagtacgaccagagccatgtgcggggcagcga
ccggcaggagggaaagccctgcgcggggaagggcaggcccaggccgcccagggctacgcg
gccgcgaacggttgggggacggtcctggtctctggcctggtcccgcaagatccccgcgct
gcgccgcctcccggaggaaggcagctcctcctcctgcgcccacctcgctgggtacccagt
tgtttcccaaactcacaaagcgcagacatctcccaagaggacaggaagcctgcaaagagg
cgccccacacacttttatcacccagacgaacacagtagcagcgaccccatcagcctacga
ttatcggggcagatctcacctcctggacagaatcagcttcttaggtctcagccttacgac
atgagggtcccggaagtgccaataagccatccacgcagaccagcacttgcccagcctctg
gcgctcgaccttcgccccacctggaaggcgccggatgcgagactcgcccttggctcggcc
cgcggccccggccggcgcctcgcccttcaccttcaagtccccgagggagctcggcaactc
ggcccaaggacaggggcccagcctagccgtcaccgccggcagcgcgctccgggtctggct
ctggtagtcactggcgtatcccgcatccggcctgctcacggcgctccaggcctgccccgc
gcgccgaaaccctccgccggacgcggaggaaaagaaggtggtgagcgaggcacggagatg
ctccgacggctgcgcgggtctccgaggccgaaccgccacccgcgttccgggccagtccca
gcccacggcgtggccagcgctgccgccggtccagcgacactgcgggcgcccccgggccgc
ggggcctcttctgagaccatgtggcccacagagaatctaagctcccgccgccgggctcca
cctcaacggcggagaactcgggcgccgagcatcgcccgatccctacccggcagcggacgg
ctacagggtttgattttcccctccacaggaaagaacgtgcagaggcacaaatcccctcct
cttccctcagaggaaagcctgtcccagcggtcccgctga

>gi568815590f:54358139_54559992|GENSCAN_predicted_peptide_9|205_aa
MQSDQALVILPVHHRENCLPVNYDCSGGWSLGGSGCIARYRIALVGQKLLPHQLPPSSRG
NIRSEELRYTGRKQTFRVVGAGPRSQTQLGGSQNEVSSSITCAAPTLPEYAACTNSRQSP
SDTPAPLLQLLRLLSREPRMRALFRSHFLHMEIGTLEPQSHQHSLALLSAFTPAAESTAS
DESYSLISVYMGASAHKSLKRDADL

>gi568815590f:54358139_54559992|GENSCAN_predicted_CDS_9|618_bp
atgcaaagtgatcaggccctagtcatcttgccagtgcaccacagagaaaactgccttcca
gtgaattatgactgctcaggagggtggtcactcggaggctcaggctgcattgctcggtac
agaattgcgctggtggggcagaagcttcttcctcatcagctgccccccagctcccgtgga
aatatcaggtcagaggaactcaggtacacagggaggaaacagaccttccgagtggttggg
gctggccccaggtcacagacccagctagggggctctcaaaatgaggtgtccagctccatc
acctgtgcagcgcccaccctgcctgagtatgctgcttgcacgaactctcgccagagcccc
tcagacacccctgcgcccctgctccagctgctcaggctgctgtccagagaacccagaatg
cgagctctcttcagatctcacttcctccatatggaaattggaactctcgaaccccagtct
caccaacactctctggccctcttgtctgccttcacccctgctgctgaaagcacagcttcg
gatgaatcctatagtctcatctctgtttacatgggagcttctgctcacaagagcctgaag
agggatgctgatctatga

>gi568815590f:54358139_54559992|GENSCAN_predicted_peptide_10|553_aa
MEAMLGRQGSFLIILKDRYRCPVTQACFSHTGISPPSGTWVELEAMILSKVIKEQKTKCR
ILSLCSLATSPLAPSHIIRFLCIALEGKDLALERRKPAPARVPTKCPLRGSCHLFGFLSL
DGAVFLDDVQWMNKWRLYYQVLNFGMIVSSALMIWKGLMVITGSESPIVLLSGSMEPAFH
RGYLLFLTNRVEDPIRVGEIAVLRIEGRKIPIVHRVLKIHEKQNGHIKFLTKGDNNAVDD
RGLYKQDQHWLEKKDVVGRARGFVPYIGIGTSLMNDYPKHKYEVLFLLGLFVLVHHGTAF
HRRKGRQFLMLPSQKSNTEEGKEKEKKNGIRALTSVRSNQSVPFPREDITRRSHSGAISK
PSPDTQSAFTVDFKQRQGGQASGHQQQNFLFEVPVLERSKIGIQETYLNVIKAIYDKPTA
NVILKREKLKAFSLRTGIRQGRPLSPLLSNIVPEVPARAMRQKKKIKGIQIGKEEVKLLL
FTDDMIVYLENPKDSSKKLPELHLCFSAFLIKGLLREYLNAAAKDVLKSVGNNEDKAFLV
LSCYTETEQSYDV

>gi568815590f:54358139_54559992|GENSCAN_predicted_CDS_10|1662_bp
atggaggcaatgctgggccggcaaggcagcttcctcatcatcttaaaggaccgataccga
tgtcctgtcactcaggcctgcttctcccacaccgggatctcacctccttcagggacatgg
gtggagctggaagccatgatccttagcaaagtaattaaggaacaaaaaactaaatgccgt
atcttatcactttgctctttggccacaagcccactggccccaagccacatcatcaggttc
ctctgcattgccttggaagggaaggatttggcattggagcgcaggaagcctgctccagcc
agagttcctacaaagtgccctctgcgtggcagctgccatctgttcggctttctctcctta
gacggagcagtctttttggatgatgtgcagtggatgaacaagtggcggctctattatcaa
gtcctaaattttggaatgattgtctcatcagcactcatgatctggaaggggttaatggta
ataactggaagtgaaagtccaattgtgttgctcagtggcagcatggaacctgcatttcat
agaggatatcttctctttctaacaaatcgagttgaagatcccatacgagtgggagaaatc
gctgttctaaggatagaaggaagaaagattcctatagttcaccgagtcttgaagattcat
gaaaagcaaaatgggcatatcaagtttttgaccaaaggagataataatgcggttgatgac
agaggcctctataaacaagatcaacattggctagagaaaaaagatgtcgtggggagagcc
aggggatttgttccttatattggaattgggacgagcctcatgaatgactatcctaaacat
aagtatgaagtgctctttttgctgggtttatttgtgctggtccatcatgggacagccttt
catcgtcgcaaaggaaggcagttcctgatgctcccctctcaaaaatccaacacagaagag
ggaaaagaaaaagaaaaaaagaatggcattagagcccttacaagtgtccgaagcaaccag
agtgttccttttccacgcgaggacataacaagaaggtcccactcaggagccataagcaag
ccctcaccagacactcaatctgccttcactgtggacttcaagcagaggcagggcggccaa
gcttctggtcaccaacagcagaactttctatttgaagtcccggttttggaaagaagcaaa
atcggcatacaagagacatacctcaatgtaataaaagcaatctatgacaaacccacagcc
aacgttatactgaaacgggaaaagttgaaagcattctccctgagaactggcataagacaa
ggacgcccactctcaccacttctatctaacatagtaccggaagtcccagccagagcaatg
agacaaaagaaaaaaatcaagggcatccaaattggtaaagaggaagtcaaacttttgttg
tttactgatgatatgatcgtatacctagaaaaccctaaagactcatccaaaaagctccca
gaactgcatctctgtttctccgccttcctaatcaaaggcttacttcgtgagtatctgaat
gcagctgcaaaagatgtcctaaaatccgtgggaaataatgaagacaaggctttccttgtt
ctatcctgctacacagaaacagagcagtcttatgatgtatag