GENSCAN 1.0	Date run:  4-Nov-116	Time: 18:23:06

Sequence gi568815588f:117443268_117648229 : 204962 bp : 47.12% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   3810   3943  134  0  2   87   93    44 0.595   5.09
 1.02 Intr +   3991   4123  133  2  1   63   31    79 0.120  -0.60
 1.03 Intr +  14782  14899  118  1  1   89   72    47 0.295   3.67
 1.04 Intr +  15191  15326  136  1  1   58   94    46 0.267   2.34
 1.05 Intr +  24068  24117   50  0  2  113   44    16 0.021  -1.90
 1.06 Intr +  28269  28319   51  2  0  104  103   -15 0.029   0.70
 1.07 Term +  33919  33987   69  0  0  124   48    36 0.049   1.14
 1.08 PlyA +  34183  34188    6                               1.05

 2.02 PlyA -  34217  34212    6                               1.05
 2.01 Sngl -  36945  36502  444  0  0   41   42   249 0.812  11.88
 2.00 Prom -  44793  44754   40                              -2.56

 3.00 Prom +  49154  49193   40                              -6.06
 3.01 Init +  49726  49821   96  0  0   88   73   -16 0.193  -2.79
 3.02 Intr +  53395  53601  207  0  0   60  105    99 0.681   8.07
 3.03 Intr +  55947  56059  113  2  2   92   93    42 0.568   4.28
 3.04 Term +  69635  69743  109  2  1  109   43    44 0.375  -0.02
 3.05 PlyA +  72886  72891    6                               1.05

 4.00 Prom +  84428  84467   40                              -2.66
 4.01 Init +  91405  91768  364  0  1   69   44   172 0.355   7.84
 4.02 Intr +  92038  92175  138  2  0   72   68    80 0.297   4.84
 4.03 Intr +  92308  92400   93  2  0   80  101    31 0.071   3.54
 4.04 Intr +  99080  99242  163  0  1 -132   68   300 0.032   5.03
 4.05 Intr + 100000 100406  407  1  2   22  102   615 0.039  50.29
 4.06 Intr + 102048 102209  162  1  0   98   43    47 0.335   1.15
 4.07 Intr + 102365 102549  185  0  2  129   62   205 0.992  21.51
 4.08 Term + 104798 104965  168  1  0  119   42   108 0.989   7.18
 4.09 PlyA + 105507 105512    6                               1.05

 5.14 PlyA - 105661 105656    6                               1.05
 5.13 Term - 110475 110330  146  1  2   52   42   139 0.754   3.77
 5.12 Intr - 113070 112893  178  0  1   98   28   100 0.681   4.49
 5.11 Intr - 118158 118012  147  0  0   28  110    57 0.574   2.33
 5.10 Intr - 122877 122749  129  0  0    1   94   133 0.294   6.09
 5.09 Intr - 129199 128947  253  0  1   67   39    79 0.009  -1.66
 5.08 Intr - 142383 142235  149  0  2   81   77    75 0.573   4.73
 5.07 Intr - 143283 143199   85  2  1  141   74    57 0.927   9.42
 5.06 Intr - 144734 144640   95  2  2   36   95    19 0.735  -3.84
 5.05 Intr - 144985 144770  216  1  0   73  103    87 0.603   7.40
 5.04 Intr - 157829 157732   98  0  2  138   53    15 0.439   2.73
 5.03 Intr - 164120 164043   78  0  0   50   88    47 0.225   0.42
 5.02 Intr - 166741 166661   81  2  0   62   84    65 0.232   3.11
 5.01 Init - 191773 191719   55  1  1   64   98    53 0.538   5.35

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init + 100001 100406  406  1  1   61  102   608 0.924  56.25


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815588f:117443268_117648229|GENSCAN_predicted_peptide_1|230_aa
XNHMAKGAACLDDQGPRPLISPCILLGLSVLQILMTAMEEEQLFEDLTHAHRVFNDHLWM
TPTVSSCQVPTDDYLVGPLVSQTEYLWCPQSSVFFHQQLHSGSSLTDGGPGHGPFFPGAG
QPDMTSSRQQHVGPRPVSTPMELHFPNTWHKHDLVKCSQHLFEIGGVFSFIFQMEAACVR
GKRNARARENQPLATSILFSVCGFRLPHHQSEERLGGRGDFEKLLLCQVN

>gi568815588f:117443268_117648229|GENSCAN_predicted_CDS_1|693_bp
nncaatcacatggccaagggagctgcctgcttggatgaccaggggcccaggcctcttatc
tccccttgcattttattgggactgtcagtcctgcaaatactcatgacggcaatggaggag
gagcagttgtttgaagacctcacccatgcccatcgtgtctttaacgaccacctgtggatg
actcctacggtctccagctgccaggtgcctactgatgactacctggttggcccactggtc
tcccaaacagagtatctttggtgtccccaaagttctgtgtttttccatcagcagctgcat
tctggttcctccctcaccgatggcggtcctggtcacggccctttcttccctggggcaggg
cagcctgatatgacatcgtcgaggcagcagcatgtgggcccccgacccgtgtctaccccc
atggagctccattttcctaacacctggcacaagcacgacctagtgaaatgctcacagcat
ctcttcgagatcggtggcgttttctcattcatttttcagatggaggctgcctgtgtccgt
ggcaagaggaatgcgcgagccagagagaaccagcccctggcaaccagcattctattttcg
gtctgtggatttcgcttacctcatcaccagagtgaggagaggctaggaggaagaggagac
tttgagaagctgcttctttgccaggtgaactag

>gi568815588f:117443268_117648229|GENSCAN_predicted_peptide_2|147_aa
MANRLAQVKAITTRWANGLAQVKTLTTRWANGLAQVKTLTTRQANGLAQVKTLTTRQAKR
LAQVKTLTTRWANGLAQVKTLTTRLANGLAQVKAFTTRRVNGLAQVKALTTRLVNGQAQV
KALTTRWVNWLAQVKALAICMVHPHVV

>gi568815588f:117443268_117648229|GENSCAN_predicted_CDS_2|444_bp
atggcaaacaggctagctcaggttaaagccatcaccaccagatgggcaaatgggctagct
caggttaaaaccctcaccaccagatgggcaaacgggctagctcaggttaaaaccctcacc
accagacaggcaaacgggttagctcaggttaaaaccctcaccaccagacaggcaaagagg
ctagctcaggttaaaaccctcaccactagatgggcaaacgggctagctcaggttaaaacc
ctcaccaccagactggcgaatgggctagctcaggttaaagccttcaccaccagacgggtg
aatgggctagctcaggttaaagccctcaccaccagactggtgaatggacaagctcaggtt
aaagccctcaccaccagatgggtaaactggctagctcaggttaaagcccttgccatctgc
atggtacatccacacgtggtataa

>gi568815588f:117443268_117648229|GENSCAN_predicted_peptide_3|174_aa
MPNFHSQGRKSLTHSESRELETFGEQSPKVAERASLSAEETTPYQDFPAGGSRRTPETAG
RLHFELKVLPIKCKIRSLETHRVWLTPDADLHWRLCGGDEPVSSNTTDRSFPFSANIHVH
FVLDVVEVFLTTAQQTEIRCPMDLPALLKVLYGSQGLHSKYSHLLSLYLRSSAI

>gi568815588f:117443268_117648229|GENSCAN_predicted_CDS_3|525_bp
atgcctaactttcacagtcagggaaggaaaagcctcacacactcagaaagcagagaacta
gaaacatttggtgaacagtctcccaaagtggctgagcgagcgagcctgtcggccgaggag
accacgccataccaggattttccagcaggtggcagccgacgcacgccagagacagctggg
cgcctacactttgaactcaaggttcttccaattaagtgcaagataaggagcttggagact
catcgcgtttggcttactcctgacgcagacttgcactggaggttgtgtggaggggatgag
ccggtttcctccaacaccacagacaggtctttcccattctctgcaaatattcacgtccat
tttgtccttgatgtggtggaagtgttcttaacaactgcacagcagactgagatacgctgc
ccgatggatcttccagccctgctcaaagtcctctatggctcccaggggctacacagcaaa
tatagccacctccttagtctttatttaagatcttctgcaatttga

>gi568815588f:117443268_117648229|GENSCAN_predicted_peptide_4|559_aa
MPPFVAHAAPGKLLAAGAKRRAAAVGPLRVHARGGRTLRAQRRGGLRGPSGLRLLRVPRG
SLGPHSRCLLQTPGAGHEAEGSAWPWEKRGARSLPAPRRRGDANRGAGPGMANLQDRGAP
ECGAEPGKKTLDEGSWGRLAGCGWKHPFSRPPAQALLCGHQQRFPGRFLNSGLETAGAKP
GRRKRAGPEAGKSGPGVNEEEEEEEEEEEEEEEEKKKLEEEEEAKEEEKPQRAPQERVSW
ERGAKARRSPAARMFQPAPKRCFTIESLVAKDSPLPASRSEDPIRPAALSYANSSPINPF
LNGFHSAAAAAAGRGVYSNPDLVFAEAVSHPPNPAVPVHPVPPPHALAAHPLPSSHSPHP
LFASQQRDPSTFYPWLIHRYRYLGHRFQAPGEEVARPAAPGRLRSRPRSGAWGLAPLRQR
LVGCRTGGDPAFRAGQLSRRSLRNDTSPESFLLHNALARKPKRIRTAFSPSQLLRLEHAF
EKNHYVVGAERKQLAHSLSLTETQVKVWFQNRRTKFKRQKLEEEGSDSQQKKKGTHHINR
WRIATKQASPEEIDVTSDD

>gi568815588f:117443268_117648229|GENSCAN_predicted_CDS_4|1680_bp
atgccaccctttgttgcgcacgccgcccccggcaagctgctggcggccggggctaagcgg
agggcggccgcggtcgggcctctccgggtccacgccaggggtgggaggacacttcgggcc
cagcgtagaggaggcctccgaggcccaagcgggcttcggctgctgcgagtccccagaggc
tccctcgggcctcactcgcggtgtctcctccagacgccaggggcaggccacgaagccgag
ggctccgcgtggccgtgggagaagcggggtgcacggagccttcccgcgcccagacgccga
ggggatgcaaacaggggagccgggcctggtatggccaacctccaggatcgaggggcccca
gaatgcggggcagagccggggaagaagacgctggacgaggggtcttggggccgcctcgct
ggctgcggttggaagcacccgttttcccgcccgcccgcgcaggcgctgctctgtggccac
cagcagaggtttcccggccgcttcctaaactcggggctggagaccgcaggagctaaacca
ggaagaagaaagagggcagggcctgaggccgggaagagcggcccgggggtcaacgaggag
gaggaagaagaggaggaggaggaagaagaggaggaggaggagaagaagaaactggaggaa
gaggaggaggcgaaggaggaggagaagccgcagcgggcgccgcaggagcgagtgagctgg
gagcgaggggcgaaggcgcggagaagcccggccgcccgcatgttccagccggcgcccaag
cgctgcttcaccatcgagtcgctggtggccaaggacagtcccctgcccgcctcgcgctcc
gaggaccccatccgtcccgcggcactcagctacgctaactccagccccataaatccgttc
ctcaacggcttccactcggccgccgccgccgccgccggtaggggcgtctactccaacccg
gacttggtgttcgccgaggcggtctcgcacccgcccaaccccgccgtgccagtgcacccg
gtgccgccgccgcacgccctggccgcccaccccctaccctcctcgcactcgccacacccc
ctattcgcctcgcagcagcgggatccgtccaccttctacccctggctcatccaccgctac
cgatatctgggtcatcgcttccaagcgcccggcgaggaggtggcgaggcccgcggcgcca
gggcggctgcggagccggccgaggtcaggagcctggggactggctcctctgcgacagcgg
ctggttgggtgccgcaccggtggagacccggcgttccgggccgggcagctgagcaggcgt
tcccttcggaacgacactagccccgagagtttccttttgcacaacgcgctggcccgaaag
cccaagcggatccgaaccgccttctccccgtcccagcttctaaggctggaacacgccttt
gagaagaatcactacgtggtgggcgccgaaaggaagcagctggcacacagcctcagcctc
acggaaactcaggtaaaagtatggtttcagaaccgaagaacaaagttcaaaaggcagaag
ctggaggaagaaggctcagattcgcaacaaaagaaaaaagggacgcaccatattaaccgg
tggagaatcgccaccaagcaggcgagtccggaggaaatagacgtgacctcagatgattaa

>gi568815588f:117443268_117648229|GENSCAN_predicted_peptide_5|569_aa
MRYQPFKELGRKLLQAENTVRICMGIEAFDEYPYVFLRSKENSTGDPANQWQPPYPLTVA
ANTNPMELHLKGPVPYPVWFTGIMILPPSALKPMSSGTMLCVPPGACREENGKAQTTPCL
RKSKDALQWNSTYQCILGQKEKGREEKADGGHNINNGHSLRACDELAMVLGPRGTVLILK
VDTDNQPSKHIGNKLKNDICCSEHETGWSCIVQIFQDYWGTNAEHLVLKDFHCSGQPLIL
KEAKPGFSTKQQMSFQQQKNTSPMHMNLRQHRTFTICWLRQVTQPSLCTQRLDEPVARKC
QVETSQQTVHERWWNSVLHHPHASQLSPSPELSFTWRKVPSSRLPPSLGQLASKDWSKQE
YKDPVPSLIQLRIHPAKPPSDAEEKPLYEMFKEASSRTYPAEKFHWSSSFTTQLSWLLWA
ASSCWGLVPMVNLCCDIAGEIVAKAAGTQGGQDHDHRHPRPQALHPTDKVSEVPDPSGTR
SSDRAGPPTTDLPALSYLTQDEATARVAPVEDKGWTWWALLEECDAPLPYPDPSSGRWPA
VRFWHPDSQLRGPPETPSRATDTNKQKAN

>gi568815588f:117443268_117648229|GENSCAN_predicted_CDS_5|1710_bp
atgaggtaccagcccttcaaagaactagggagaaagctgctccaagcagagaacactgta
cgcatctgcatggggatagaagcttttgatgaatatccatatgtgtttctcaggagcaag
gaaaatagtacaggggaccctgccaatcaatggcagcctccttatccactgactgtggcg
gccaacaccaatccaatggagttgcatttgaaaggacccgtgccataccccgtctggttt
acgggcatcatgatccttcccccatcagccttgaagcccatgagttcagggaccatgctt
tgtgtccctccaggggcctgcagagaggaaaatggcaaagcgcagactacaccttgtctc
agaaagagcaaggatgccctgcagtggaatagcacttaccagtgcattctgggacaaaag
gaaaaaggcagggaggagaaagcagatggtggccataatatcaataatggccattccctg
agggcctgcgatgagctagccatggttctaggccccagaggtactgtgctgattctaaag
gtagatacagacaaccaaccaagtaaacacataggaaataaactcaagaatgatatatgc
tgttcagagcatgaaacaggatggtcctgcattgtccagatcttccaggactattggggg
accaatgctgagcacttggtcctgaaagattttcactgcagtggacagcctctcatcctc
aaggaggctaagcctggtttttccacaaaacagcagatgagcttccagcagcaaaagaac
acaagcccaatgcacatgaacttaagacaacatcgcacatttactatctgctggctaagg
caagtcacacagccaagcctctgtacccaaagattggatgaaccagtggcaagaaaatgc
caggtggaaacatcccaacagacagtccatgagcgatggtggaactctgtgctgcaccac
ccacatgcctcgcagctgagtccttctccagaactttccttcacctggaggaaggtgcct
agttcaaggttacccccctccctggggcagctagcatccaaggactggtccaagcaggag
tacaaagacccagtccccagcctcattcagcttaggattcatcctgccaagcctccctcg
gatgctgaggagaagccactctatgagatgttcaaggaggcctcatcacggacctatccg
gctgagaagttccattggtccagctccttcactacccagctatcctggttactctgggct
gccagctcctgctggggcctggttcccatggttaatctgtgctgcgacatagcaggggag
atagtggctaaagctgctggcacccaagggggacaggaccatgaccacaggcacccaagg
ccccaggccctgcaccccacagacaaggtctcagaagtgcctgatccctcaggaacaaga
tccagtgaccgggcaggtcccccaacaactgacttacctgccctctcttacctgacccag
gatgaggccactgccagagtggcccctgttgaggacaaaggctggacatggtgggctctg
ctagaggagtgcgacgcgcctctgccctacccggaccccagctctgggcgctggcccgcc
gtccgcttctggcaccccgactcgcagctccggggccctccggagactcccagccgggca
acagacactaataaacaaaaggccaattag