FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB9677, 104 aa
  1>>>pF1KB9677 104 - 104 aa - 104 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 7.2383+/-0.000681; mu= 2.9614+/- 0.042
 mean_var=140.0294+/-27.135, 0's: 0 Z-trim(115.4): 9  B-trim: 0 in 0/54
 Lambda= 0.108384
 statistics sampled from 15956 (15963) to 15956 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.811), E-opt: 0.2 (0.49), width:  16
 Scan time:  1.640

The best scores are:                                      opt bits E(32554)
CCDS14507.1 TCEAL9 gene_id:51186|Hs108|chrX        ( 104)  707 120.1 2.5e-28


>>CCDS14507.1 TCEAL9 gene_id:51186|Hs108|chrX             (104 aa)
 initn: 707 init1: 707 opt: 707  Z-score: 622.1  bits: 120.1 E(32554): 2.5e-28
Smith-Waterman score: 707; 100.0% identity (100.0% similar) in 104 aa overlap (1-104:1-104)

               10        20        30        40        50        60
pF1KB9 MKSCQKMEGKPENESEPKHEEEPKPEEKPEEEEKLEEEAKAKGTFRERLIQSLQEFKEDI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS14 MKSCQKMEGKPENESEPKHEEEPKPEEKPEEEEKLEEEAKAKGTFRERLIQSLQEFKEDI
               10        20        30        40        50        60

               70        80        90       100    
pF1KB9 HNRHLSNEDMFREVDEIDEIRRVRNKLIVMRWKVNRNHPYPYLM
       ::::::::::::::::::::::::::::::::::::::::::::
CCDS14 HNRHLSNEDMFREVDEIDEIRRVRNKLIVMRWKVNRNHPYPYLM
               70        80        90       100    




104 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 18:11:26 2016 done: Fri Nov  4 18:11:26 2016
 Total Scan time:  1.640 Total Display time: -0.030

Function used was FASTA [36.3.4 Apr, 2011]