GENSCAN 1.0	Date run:  4-Nov-116	Time: 18:00:49

Sequence gi568815578r:40587882_40788850 : 200969 bp : 45.33% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.00 Prom +  21373  21412   40                              -2.46
 1.01 Sngl +  32359  33372 1014  0  0   88   43   601 0.844  52.62
 1.02 PlyA +  33600  33605    6                               1.05

 2.00 Prom +  33769  33808   40                              -4.96
 2.01 Sngl +  34231  35295 1065  0  0   66   51   380 0.621  29.25
 2.02 PlyA +  35487  35492    6                               1.05

 3.00 Prom +  35635  35674   40                              -8.96
 3.01 Sngl +  35876  36448  573  1  0   86   47   243 0.988  16.17
 3.02 PlyA +  36620  36625    6                              -0.45

 4.00 Prom +  36990  37029   40                              -2.46
 4.01 Init +  60138  60234   97  2  1   57   61    67 0.116   1.37
 4.02 Intr +  65577  65708  132  1  0  119   86    14 0.231   4.92
 4.03 Intr +  73050  73123   74  1  2   64   52    67 0.070  -0.17
 4.04 Intr +  76450  76549  100  0  1  107  110     1 0.241   3.88
 4.05 Intr +  82821  82856   36  1  0  117   68    13 0.005   0.43
 4.06 Intr +  91371  91550  180  1  0   64   92   119 0.243   9.74
 4.07 Intr +  94839  95005  167  1  2   -1  -11   179 0.206  -1.22
 4.08 Term +  95338  95700  363  0  0   44   46   183 0.439   4.27
 4.09 PlyA +  97974  97979    6                               1.05

 5.17 PlyA -  98359  98354    6                               1.05
 5.16 Term - 101065  99998 1068  1  0  111   47  1620 0.400 152.33
 5.15 Intr - 102604 102396  209  2  2   76   91   128 0.549  10.70
 5.14 Intr - 104956 104843  114  2  0   21   22   144 0.525   1.52
 5.13 Intr - 109984 109795  190  1  1   79   52   116 0.883   6.26
 5.12 Intr - 111589 111427  163  0  1   81   99    11 0.216   1.48
 5.11 Intr - 115744 115672   73  2  1   65  103    42 0.173   1.86
 5.10 Intr - 118430 118314  117  0  0   88   53    37 0.072   0.64
 5.09 Intr - 125956 125836  121  1  1   91   36    57 0.009   0.87
 5.08 Intr - 137430 137312  119  1  2   83   74    36 0.296   1.88
 5.07 Intr - 139391 139276  116  1  2   79   80    80 0.450   6.39
 5.06 Intr - 163474 163348  127  2  1   65   47    69 0.001   0.24
 5.05 Intr - 176033 175929  105  0  0   61   74    54 0.002   1.49
 5.04 Intr - 178409 178266  144  0  0   70   68    81 0.002   4.55
 5.03 Intr - 185247 185124  124  0  1   52   49    51 0.001  -2.24
 5.02 Intr - 187032 186937   96  0  0  120  105     1 0.008   5.21
 5.01 Init - 193350 193345    6  0  0  102   95     2 0.022   3.19

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init +  84700  84753   54  0  0   91   98   100 0.940  12.58
S.002 Intr + 182312 182358   47  2  2   88  119    47 0.924   5.85


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815578r:40587882_40788850|GENSCAN_predicted_peptide_1|337_aa
MGKKQNRKTGNSKKQSASPPPKERSSSPAMEQSWTENDFDELREGFRRSNYSELREDIQT
KGKEVENFEKNLEECITRITNTEKCLKELMELKTKARELREECRSLRSRCDQLEERVSAM
EDEMNEMKQEGKFREKRIKRNEQSLQEIWDYVKRPNLRLIGVPESDGENGTKLENTLQDI
IQENFPNLARQANVKIQEIQRTPQRYSSRRATPRHIIVRFTKVEMKEKMLRAAREKGRVT
LKGKPIRLTADLSAETLQARREWGPIFNILKEKNFQPRNSYPAKLSFISEGEIKYFTDKQ
MLRDFVTTRPALKELLKEVLNMERNNWYQLLQNHAKM

>gi568815578r:40587882_40788850|GENSCAN_predicted_CDS_1|1014_bp
atggggaaaaaacagaacagaaaaactggaaactctaaaaagcagagcgcctctcctcct
ccaaaggaacgcagttcctcaccagcaatggaacaaagctggacggagaacgactttgac
gagctgagagaaggcttcagacgatcaaattactctgagctacgggaggacattcaaacc
aaaggcaaagaagttgaaaactttgaaaaaaatttagaagaatgtataactagaataacc
aatacagagaagtgcttaaaggagctgatggagctgaaaaccaaggctcgagaactacgt
gaagaatgcagaagcctcaggagccgctgcgatcaactggaagaaagggtatcagcgatg
gaagatgaaatgaatgaaatgaagcaagaagggaagtttagagaaaaaagaataaaaaga
aatgagcaaagcctccaagaaatatgggactatgtgaaaagaccaaatctacgtctgatt
ggtgtacctgaaagtgacggggagaatggaaccaagttggaaaacactctgcaggatatt
atccaggagaacttccccaatctagcaaggcaggccaacgttaagattcaggaaatacag
agaactccacaaagatactcctcgagaagagcaactccaagacacataattgtcagattc
accaaagttgaaatgaaggaaaaaatgttaagggcagccagagagaaaggtcgggttacc
ctcaaagggaagcccatcagactaacagcggatctctcggcagaaaccctacaagccaga
agagagtgggggccaatattcaacattcttaaagaaaagaattttcaacccagaaattca
tatccagccaaactaagcttcataagtgaaggagaaataaaatactttacagacaagcaa
atgctgagagattttgtcaccaccaggcctgccctaaaagagctcctgaaggaagtgcta
aacatggaaaggaacaactggtaccagctgctgcaaaatcatgccaaaatgtaa

>gi568815578r:40587882_40788850|GENSCAN_predicted_peptide_2|354_aa
MKAEIKMFFETNENKDTTYQNLWDAFKAVCTGKFIALNAHKRKQERSKIDTLTSQLKELE
KQEQTHSKASRRQEITKIRAELKEIETQKTLQKINESRSWFFERINKIDRPLARLIKKKR
EKNQIDTIKNDKGDITTDPTQIQTTIREYYKHLYANKLENLEEMDKFLDTYTLPRLNQEE
VESLNRPITGSEIVAIINSLPTKKSPGPDGFTAEFYQRYKEELVPFLLKLFQSIEKEGIL
PNSFYEASIILIPKPGRDTTKKENFRPISLMNIDAKILNKILAKRIQQHIKKLIHHDQVG
FIPGMQDWFNIRKSINVIQHINRAKDKNHMIISIDAEKAFDKIQQPFMLKTLNK

>gi568815578r:40587882_40788850|GENSCAN_predicted_CDS_2|1065_bp
atgaaggcagaaataaagatgttcttcgaaaccaacgagaacaaagacacaacataccag
aatctctgggacgcattcaaagcagtgtgtacagggaaatttatagcactaaatgcccac
aagagaaagcaggaaagatccaaaattgacaccctaacatcacaattaaaagaactagaa
aagcaagagcaaacacattcaaaagctagcagaaggcaagaaataactaaaatcagagca
gaactgaaggaaatagagacacaaaaaacccttcaaaaaattaatgaatccaggagctgg
ttttttgaaaggatcaacaaaatagatagaccactagcaagactaataaagaaaaaaaga
gagaagaatcaaatagacacaataaaaaatgataaaggggatatcaccactgatcccaca
caaatacaaactaccatcagagaatactacaaacacctctacgcaaataaactagaaaat
ctagaagaaatggataaattcctggacacatacactctcccaagactaaaccaggaagaa
gttgaatctctgaatagaccaataacaggatctgaaattgtggcaataatcaatagctta
ccaaccaaaaagagtccaggaccagatggattcacagccgaattctaccagaggtacaag
gaggaactggtaccatttcttctgaaactattccaatcaatagaaaaagagggaatcctc
cctaactcattttatgaggccagcatcattctgataccaaagcctggcagagacacaacc
aaaaaagagaattttagaccaatatccttgatgaacattgatgcaaaaatcctcaataaa
atactggcaaaacgaatccagcagcacatcaaaaagcttatacaccatgatcaagtgggc
ttcatccctgggatgcaagactggttcaatatacgcaaatcaataaatgtaatccagcat
ataaacagagccaaagacaaaaaccacatgattatctcaatagatgcagaaaaggccttt
gacaaaattcaacaacccttcatgctaaaaactctcaataaatga

>gi568815578r:40587882_40788850|GENSCAN_predicted_peptide_3|190_aa
MAILPKVIYRFNAIPIELPMPFFTDLEKTTLKFIWNQKRARIAKSILSQKNKAGGITLPD
FKLYYKATVTKTAWYWYQNRDIDQWNRTEPSEITPHIYNYLIFDKPEKNKQWGKDYLFNK
WCWENWLAICRKLKLDPFLTPYTKINSRWIKDLNVRPKTIKTLEENLGNTIQDIGMGKDF
MSKTPKAMAT

>gi568815578r:40587882_40788850|GENSCAN_predicted_CDS_3|573_bp
atggccatactgcccaaggtaatttacagattcaatgccatccccatcgagctaccaatg
cctttcttcacagatttggaaaaaactactttaaagttcatatggaaccaaaaaagagcc
cgcatcgccaagtcaatcctaagccaaaagaacaaagctggaggcatcacactacctgac
ttcaaactatactacaaggctacagtaaccaaaacagcatggtactggtaccaaaacaga
gatatagatcaatggaacagaacagagccctcagaaataacgccgcatatctacaactat
ctgatctttgacaaacctgagaaaaacaagcaatggggaaaggattacctatttaataaa
tggtgctgggaaaactggctagccatatgtagaaagctgaaactggatcccttccttaca
ccttatacaaaaatcaattcaagatggattaaagacttaaacgttagacctaaaaccata
aaaaccctagaagaaaacctaggcaataccattcaggacataggcatgggcaaggacttc
atgtctaaaacaccaaaagcaatggcaacataa

>gi568815578r:40587882_40788850|GENSCAN_predicted_peptide_4|382_aa
MERAGNEAGSRGKPSQTESSTAPKKEALIQDARIFCGPLSQLGSVPPLLGSQSPRALSYA
MVIWVPLEVNSTMKIEDCWGKVKEDNFGGEFGCGSAEEKEVRALVIITSKPAQPVPEDLM
AWPGLAWPVPAPEAESLSVAPYAQGLAAAAAALKCFLLLLANPRSGDRPWHICWDAWLGK
ESAVCSSTYVAALMEQMLDCTALDLTGPRLSFPGDPFPENRLVPVPPQRGADPQRTSPLG
EPGREKRDSWSGQDESPEQRALWRRRIQSAQPPAHPPEIRGRKRRDSRRTRLQLLQPRAR
SEGKPSSGGLLCPVRASGCLSVPVSECVSGCRRQPVYVGRVLTWKTPGPGGFSPGDVKDC
KEPASRRERWERKRRMTVAGCC

>gi568815578r:40587882_40788850|GENSCAN_predicted_CDS_4|1149_bp
atggagcgggcagggaatgaagcaggcagcagaggaaagccctcccagacagagtcctca
acagcaccaaagaaggaagccctcatccaagatgcaaggatcttctgtggacctctgtcc
cagctgggctcagtgcctcctcttctaggctcacagagcccccgagctttgtcctatgcc
atggtcatttgggtccctctggaagtaaactctacaatgaagattgaagattgttgggga
aaagttaaagaagacaactttgggggtgaatttggatgtggctctgcagaagagaaggaa
gtgagagccctggtaataatcacctccaaaccggcccaaccggtcccagaggacctgatg
gcctggcctggcctggcctggcctgtccctgccccagaggcagagagcctttctgtggct
ccttatgcacaaggcctggcagcagcagcggcagcattgaaatgcttccttctgctgctc
gcgaatccgaggagtggggaccgaccttggcacatttgctgggatgcctggctaggcaag
gagagtgccgtgtgctccagcacgtatgtggccgccctcatggagcaaatgctggactgc
acagccctggatctgacagggcccaggctcagcttccccggagatcccttcccggagaac
cgactggtgccggttcccccgcagcggggcgccgatccccagcgaacctcgccactgggg
gaacctggaagggaaaagcgggatagttggagcggtcaagacgagagcccggagcagcgg
gccctgtggcggcggcggatccagtccgcacagcctcccgcacaccccccagagatccgg
ggtcgcaagaggcgggattcgcgccggactagactgcagctgctccagccacgggcgcgg
tccgaagggaagccctcgtccgggggcctgctgtgccccgtgcgtgcgtccgggtgtctg
agcgtgcctgtctctgagtgcgtctccgggtgcaggcgccagcctgtctacgtgggacgg
gtgctgacttggaagactcccggccctggaggattttcccccggggatgtgaaggattgc
aaggagcccgcgagccgcagggagcggtgggaacggaaaaggaggatgacggtggcgggg
tgctgctag

>gi568815578r:40587882_40788850|GENSCAN_predicted_peptide_5|963_aa
MPINSLPFYTLILVGSNGYAAIILAAPTLSGLFLVSIKSPSSSAHWSLSLQVNLLFFEEK
CTPYLNHRVMDEEFGGQKQATHTTAGDGPKDIICEGLTNLLWELSVCCPYSAELSLNPPQ
GLVGPCPLTLLAAHEAEITLTHFTDEKTEAQRYLIIFPGTFSESWTHLEAYIFPPVYKDI
LKAFLLNGCMLHSGSKMWNPRGFLNQDRKEYSRMSPIGATPERGTKERQWAGQDNKLDSG
LKTSTLHAIRHVYSCTNTFTHTQRCALTCTDTFTRTQTQKQKHWGWGGHGQQVWPPGCPM
RTAAKEDTGLEVDSYGTFFGPSPLEACIAVEMESGQKQPLEMNCTQTGRHGGVIDTGAYF
SGFVKLYLRNGRFNKRLTLLPSPEAEFGGGHRYNRCSGQSVYIRCYENMRQPAGRLPGGG
NAQEKSTCVAAGKCLFQGSCKPNPYIKRELEKYLEQKLLTVHPCCMLALILNQEMALNSR
SEHRNRGCQHSNQKQSLTGRETPPRSPTTCNPQGNNAEGERRTFGLNEDARNAALVSRRP
SGPGSSRRAPPNAGARNFNGATRAELAARGSRLSTKTGPEDLYIARGEPVLGSGAHIVCV
LGWLGLGQLFSALPPRAWLGALRPAAKFPGRQRRLRLASAMAAELSMGPELPTSPLAMEY
VNDFDLLKFDVKKEPLGRAERPGRPCTRLQPAGSVSSTPLSTPCSSVPSSPSFSPTEQKT
HLEDLYWMASNYQQMNPEALNLTPEDAVEALIGSHPVPQPLQSFDSFRGAHHHHHHHHPH
PHHAYPGAGVAHDELGPHAHPHHHHHHQASPPPSSAASPAQQLPTSHPGPGPHATASATA
AGGNGSVEDRFSDDQLVSMSVRELNRHLRGFTKDEVIRLKQKRRTLKNRGYAQSCRYKRV
QQKHHLENEKTQLIQQVEQLKQEVSRLARERDAYKVKCEKLANSGFREAGSTSDSPSSPE
FFL

>gi568815578r:40587882_40788850|GENSCAN_predicted_CDS_5|2892_bp
atgcctataaattctcttcccttttacactctgattttagttgggagcaatggctatgcc
gctatcattcttgcagcccctactctctcagggctgttcctggtgagcattaagagtccc
agttctagtgcccattggtccctgtccctgcaagtcaatttgctcttctttgaagagaaa
tgcaccccctatttaaatcacagagtcatggatgaggaatttgggggacagaaacaagcc
actcacacaaccgctggggacggacccaaagacatcatctgtgagggcctcactaacctg
ctgtgggaactgtctgtctgctgcccctactctgctgaattatctttaaatccaccccag
ggcttggtaggtccatgtcctctgaccctcctggcagcccacgaggcagagattactctt
acccattttacggatgagaaaactgaggctcagagatatctgatcatcttcccaggtaca
ttcagcgagtcatggacccacctcgaagcttacattttcccacctgtctacaaggatatc
ttgaaagcatttctgctgaatggatgcatgcttcattctggatccaaaatgtggaacccc
agaggatttctcaaccaagacagaaaagagtacagcagaatgtctcctattggagctaca
ccagagagagggaccaaggaaaggcagtgggctggccaggacaacaagctggattcagga
ctcaagacatccacattacatgcaatccggcatgtatactcgtgcacaaacaccttcact
catacacagagatgtgcactcacatgcacagataccttcactcgcacacaaacacagaaa
cagaagcactgggggtggggaggacatgggcagcaggtgtggccccctggctgtcccatg
aggactgctgctaaggaagacacaggcctggaagtggattcttatggcaccttctttggc
cccagccccttggaggcgtgcattgcagtggaaatggaatcaggacagaaacagccactt
gaaatgaactgcacccagacaggccgccatggtggcgtgattgatactggagcatacttt
tcagggtttgtgaagctgtatctgcgtaatggcagatttaacaagcgtttgactctcctg
ccttcaccagaggctgagtttggtggtggacacagatataacagatgctctgggcaaagt
gtctatataaggtgctatgaaaacatgcgccagccagcaggaaggcttcctggaggaggt
aatgcccaagagaaaagcacatgtgtggctgctggaaagtgcctatttcagggaagctgc
aaacccaacccttacatcaaaagggaacttgaaaaatacttggagcaaaaactgctaact
gtgcatccttgctgtatgctggcgctgatattaaatcaggaaatggcactgaacagccgc
tccgaacacagaaacaggggttgtcaacacagcaaccaaaagcaatctctaacgggcaga
gagacgcctcctcgctcaccaaccacctgcaaccctcagggaaataacgccgaaggtgaa
cggcgcaccttcgggctgaatgaggatgccaggaatgccgctctggtttccaggcgacct
tccggcccagggagcagccgacgggcacccccgaacgctggggcacggaatttcaacggg
gcgaccagagcggagctcgcggctcgaggctcgcggctgagtacgaagacgggacccgag
gacctgtacatcgctcgaggggaacctgtcctgggctctggtgcacacatagtatgcgtt
ctgggctggcttgggttgggccagctcttctccgctcttcccccccgcgcttggctcggc
gcgctccggccggccgcaaagtttcccgggcggcagcggcggctgcgcctcgcttcagcg
atggccgcggagctgagcatggggccagagctgcccaccagcccgctggccatggagtat
gtcaacgacttcgacctgctcaagttcgacgtgaagaaggagccactggggcgcgcggag
cgtccgggcaggccctgcacacgcctgcagccagccggctcggtgtcctccacaccgctc
agcactccgtgtagctccgtgccctcgtcgcccagcttcagcccgaccgaacagaagaca
cacctcgaggatctgtactggatggcgagcaactaccagcagatgaaccccgaggcgctc
aacctgacgcccgaggacgcggtggaagcgctcatcggctcgcacccagtgccacagccg
ctgcaaagcttcgacagctttcgcggcgctcaccaccaccaccatcaccaccaccctcac
ccgcaccacgcgtacccgggcgccggcgtggcccacgacgagctgggcccgcacgctcac
ccgcaccatcaccatcatcaccaagcgtcgccgccgccgtccagcgccgctagcccggcg
caacagctgcccactagccaccccgggcccgggccgcacgcgacggcctcggcgacggcg
gcgggcggcaacggcagcgtggaggaccgcttctccgacgaccagctcgtgtccatgtcc
gtgcgcgagctgaaccgccacctgcggggcttcaccaaggacgaggtgatccgcctgaag
cagaagcggcggaccctgaagaaccggggctacgcccagtcttgcaggtataaacgcgtc
cagcagaagcaccacctggagaatgagaagacgcagctcattcagcaggtggagcagctt
aagcaggaggtgtcccggctggcccgcgagagagacgcctacaaggtcaagtgcgagaaa
ctcgccaactccggcttcagggaggcgggctccaccagcgacagcccctcctctcccgag
ttctttctgtga