GENSCAN 1.0	Date run:  4-Nov-116	Time: 17:54:15

Sequence gi568815592r:137393355_137594170 : 200816 bp : 39.91% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.03 PlyA -    556    551    6                               1.05
 1.02 Term -   3645   3543  103  2  1   70   38   131 0.127   3.07
 1.01 Init -  15490  15411   80  1  2   83   63    63 0.079   3.88
 1.00 Prom -  15667  15628   40                              -3.65

 2.00 Prom +  17257  17296   40                              -5.95
 2.01 Init +  21334  21560  227  0  2   59   18   138 0.070   1.89
 2.02 Intr +  21873  22056  184  0  1   37   41   105 0.039  -0.43
 2.03 Intr +  34661  34883  223  1  1   45   -7   230 0.060   5.98
 2.04 Intr +  38111  38147   37  0  1   84   80    56 0.056   0.80
 2.05 Intr +  39139  39371  233  1  2   65   59   159 0.137   7.19
 2.06 Intr +  40198  40345  148  2  1   24   82   109 0.344   2.27
 2.07 Intr +  41909  41981   73  2  1   71  115    43 0.593   3.79
 2.08 Intr +  46231  46333  103  0  1  105   61   -18 0.021  -3.97
 2.09 Term +  72437  72606  170  0  2   98   40   158 0.145   9.06
 2.10 PlyA +  75239  75244    6                               1.05

 3.00 Prom +  77276  77315   40                              -2.45
 3.01 Init +  80360  80448   89  1  2   81   65    74 0.565   4.56
 3.02 Intr +  83261  83404  144  2  0   24   59   112 0.196   0.38
 3.03 Term +  83650  83749  100  1  1   86   54    78 0.279   0.82
 3.04 PlyA +  83752  83757    6                               1.05

 4.06 PlyA -  84484  84479    6                               1.05
 4.05 Term -  95042  94847  196  1  1   32   32   202 0.432   4.90
 4.04 Intr -  95772  95556  217  1  1  102   50   186 0.850  12.84
 4.03 Intr -  96251  96137  115  2  1   62   47    91 0.539   1.50
 4.02 Intr -  96862  96784   79  0  1    0   62    68 0.270  -5.97
 4.01 Init - 100678 100002  677  1  2   69   63   739 0.256  62.18
 4.00 Prom - 100825 100786   40                             -12.03

 5.06 PlyA - 101667 101662    6                               1.05
 5.05 Term - 104269 103672  598  0  1   62   48   357 0.021  22.11
 5.04 Intr - 104850 104761   90  2  0   48  110    62 0.023   2.59
 5.03 Intr - 113454 113342  113  0  2   33   86    78 0.005   0.36
 5.02 Intr - 125678 125590   89  0  2   99  111     5 0.412   2.67
 5.01 Init - 137718 137643   76  0  1   83   89    61 0.590   7.00
 5.00 Prom - 140856 140817   40                              -4.45

 6.06 PlyA - 141631 141626    6                               1.05
 6.05 Term - 150865 150543  323  2  2    2   38   403 0.480  20.70
 6.04 Intr - 151103 150941  163  2  1   68   76    68 0.052   2.23
 6.03 Intr - 159778 159650  129  1  0  106   43    55 0.472   2.77
 6.02 Intr - 160177 159993  185  2  2   90   86    71 0.427   5.69
 6.01 Init - 163702 163495  208  1  1   73   72   191 0.984  15.03
 6.00 Prom - 169583 169544   40                              -5.25

 7.00 Prom + 170818 170857   40                              -6.55
 7.01 Init + 186182 186440  259  1  1   60   71   191 0.484  11.95
 7.02 Intr + 188088 188272  185  1  2  -26   63   146 0.110  -0.71
 7.03 Intr + 191816 191875   60  1  0   69   86    66 0.048   2.51
 7.04 Term + 198064 198222  159  0  0   16   38   127 0.008  -2.54
 7.05 PlyA + 198354 198359    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init -  11891  11889    3  2  0  113   81     0 0.855   1.85
S.002 Init -  25490  25353  138  2  0   87  107    99 0.918  11.89
S.003 Term +  34661  34888  228  1  0   45   43   234 0.807  10.25
S.004 Sngl - 104352 103672  681  0  0   68   48   415 0.854  29.43
S.005 Term + 175638 175808  171  2  0   74   47   112 0.891   2.54
S.006 Sngl + 195141 195476  336  2  0   68   42   164 0.808   5.60


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815592r:137393355_137594170|GENSCAN_predicted_peptide_1|60_aa
MDEAGNHHSEQTITRTENQTPHVHTHRQEEDTMWNKRESIKLYESGQAIKAELEPEFEIK

>gi568815592r:137393355_137594170|GENSCAN_predicted_CDS_1|183_bp
atggatgaagctggaaatcatcattctgagcaaactatcacaaggacagaaaaccaaaca
ccgcatgttcacactcatagacaagaagaggacacaatgtggaacaaacgagagtccata
aagttatacgagtctgggcaagccatcaaggctgaactggaaccagaatttgaaattaag
tga

>gi568815592r:137393355_137594170|GENSCAN_predicted_peptide_2|465_aa
MSLKDKPVQDQKQSSTLLVNLHVHLTLQPIVWERPGESRVHGTLPTCWERCMALTGQCQN
RSCCLYSCSVPMTPGRQQPWQHFTKSSTRKLATRLKFQFVCCYWSYIREFFSMPDWSSDL
NLAQLKSKRTGNTNLAANSTRKSQCLGGAIGCVAVDRRPALIIKRRGLSINSSSTVWTVT
SGPLPLPLCQVDEMVQENFRFADDRNSEASEILHGAANGAVHDRHHAHQAQQRGVGLVRG
RNGAQELKLNPDMLDLKQRANSSLVPSVRRHPSTRLFIFTHSLIPAVYILSAYYAPGAVV
GGIMLEGSWVLAGDKHLEMNIENSALELEGPRSYPVPSSTFSGNLLDDIPSDGELDCLHL
SAITNNAKVNLEVIMAIHPWGSLSCLCAKISLGTGHMDQAQGKPASQMQDSLSINQLSAL
FVPRSLSGVQKESVHVDKLKGGESRGFYCWIEVALSKMDGELESE

>gi568815592r:137393355_137594170|GENSCAN_predicted_CDS_2|1398_bp
atgtctcttaaagacaaacctgttcaagaccaaaagcagagcagcaccttgctggttaat
ctgcatgttcatttgaccttgcagccaatcgtctgggagaggccaggagagagcagagtg
catgggactctgcccacttgttgggaacgctgcatggccctcactgggcagtgtcaaaac
cgctcctgctgtctctacagctgctctgttccaatgacccccggaaggcagcagccctgg
cagcattttactaaatcctcaacaagaaaactcgcaactcgtctgaagtttcagtttgtt
tgttgttactggagttatatcagggagttcttttctatgccagactggagttcagattta
aatcttgcccaactcaaaagcaagcgcacaggaaacacgaacctcgccgccaattccaca
aggaaatctcagtgccttggaggggcaataggctgtgtggctgtagacagaaggccagcg
ctgataataaagaggcgaggtttatcaattaactcaagcagcactgtgtggacagtgacc
agcggtccactcccacttccgttgtgtcaggttgatgaaatggtccaggaaaacttcaga
tttgctgatgacagaaacagtgaagcatctgaaattctccatggagcagcaaatggtgct
gttcatgacaggcatcatgctcatcaagctcagcagaggggagttggtctggtgagaggc
agaaatggagcccaggaactgaagctgaaccctgacatgcttgacttaaagcagagagca
aattcttccttggtgccatctgtccgccgtcatccatccactcgtttattcatattcact
cattcactcattccggcagtatacatattgtctgcctactatgcaccaggggctgtggtg
ggagggatcatgctagaaggttcttgggtcctggcaggtgataaacacttggaaatgaat
attgaaaattcagcattggaattggagggccctagaagttatccagtgccatcctctact
ttttctgggaatctcctggatgacattcctagtgatggagagctggattgcctccacctc
tctgctatcacaaacaacgctaaagtgaacttagaggtcattatggcaatccatccctgg
ggtagcttatcctgtctttgtgccaaaatttcactgggcacaggccatatggatcaggcc
caaggaaagcctgcctcccaaatgcaggacagcttaagcattaaccagctcagtgccctc
tttgtacccaggtccttgtccggcgtccagaaagaatcagttcacgtggacaaattgaag
ggtggtgaatccaggggattttattgctggatagaggtggctctcagcaagatggatggg
gagctggaaagcgaatag

>gi568815592r:137393355_137594170|GENSCAN_predicted_peptide_3|110_aa
MKFIQAVSGVNNLSPTAFVSAAAVPLIRLRTYDQDRMERRSVLSHSNGSPLKFSSTSSLP
EQLVEQAWACPGGEMMVGTRQQGTILKAETRPSPDTKYWYLDLGLPSLQN

>gi568815592r:137393355_137594170|GENSCAN_predicted_CDS_3|333_bp
atgaagttcattcaggctgtcagtggagtcaataacttatccccaactgcttttgtttca
gcagcggcagtgcctctgatcaggctgaggacttatgaccaggacagaatggaacgacgt
tctgtgctctcacacagcaatggttctccactcaagttctcttccacatcttcccttcct
gagcagttagtggaacaagcctgggcctgcccaggaggtgaaatgatggtaggaacacga
caacaaggcaccatcctgaaagcagagaccaggccctcaccagacaccaaatactggtac
cttgatcttggacttcccagcctccagaactga

>gi568815592r:137393355_137594170|GENSCAN_predicted_peptide_4|427_aa
MMQKMPGESLSRAGAKAAGESSKYKIKKQLSEQDLQQLRLKINGRERKRMHDLNLAMDGL
REVMPYAHGPSVRKLSKIATLLLARNYILMLTSSLEEMKRLVGEIYGGHHSAFHCGTVGH
SAGHPAHAANSVHPVHPILGGALSSGNASSPLSAASLPAIGTIRPPHSLLKAPSTPPALQ
LGSGFQHWAGLPCPCTICQMPPPPHLSALSTANMARLSAESKDLLKQTFTVIALPFKYSN
YRRQKKDFMTAKHIAQTPTFNFAFHVPSRDSGALCSPFLTLHWGGGVTAKESWGLSCTQC
PFKGPTEIKLRKLGPAESVFRRASVFSEAFPGTLRGGRGWGALDDEGARQQPQSALAVAP
EPLCVSSLGTSQRTPGPRSPWPTRITAPGREPLLLTQAPGLPVAPERKYGRLSSQPGTGK
RNLTRLG

>gi568815592r:137393355_137594170|GENSCAN_predicted_CDS_4|1284_bp
atgatgcagaagatgcccggggaaagcctctcgcgggctggcgccaaggccgcgggagag
agcagcaagtacaaaatcaagaagcagctgtcggagcaggacctacagcagttgaggctg
aagatcaacggacgcgaacgcaagcggatgcacgacctgaacctagccatggacgggctg
cgcgaagtcatgccctacgcgcatgggccgtcggtgcgcaagctctccaagatcgccaca
ctcctgctcgccagaaactacatcctcatgctcaccagctccctggaggagatgaagagg
ctggttggcgagatctatgggggccaccactcggcctttcactgcgggaccgtgggccac
tcggccggccaccccgcgcacgcggccaactccgtgcacccggtgcaccccatcttgggc
ggcgcgctctcatctggcaacgcctcgtcaccgctgtccgccgcctcacttcccgccatc
ggcaccatccggcctccccactcgctactcaaggcgccctccacgccgcccgcgctgcag
ctgggcagcggcttccagcactgggctggtctgccctgcccctgcaccatctgccagatg
ccgccgccgccgcacctgtccgctctctccacagccaacatggcccggctgtcggccgag
tccaaggacttgctcaagcagacttttactgtcattgcacttccctttaaatactcgaat
tatcgacgccagaaaaaagatttcatgaccgcaaagcacatcgctcagacaccaacattt
aacttcgcgttccacgtcccttccagagactccggggccctctgttccccttttctcacc
ctccactggggaggaggagtgactgctaaggagagttggggcctctcctgtacccagtgc
ccgtttaaggggcccacagaaatcaaactccgaaagctcgggcctgcagagtcagttttc
cgtcgagcgtctgttttcagtgaagccttccctgggacactgcggggcgggagaggatgg
ggtgcgttggacgacgaaggagcccgccagcagccgcagtccgcgctcgcggtggccccg
gagcccctctgcgtctcttcgctggggacctcacagaggaccccggggcctcgctctccc
tggccgacccggatcacagcccctggaagagagccgttgcttctaacccaagcccctgga
ctgcccgtggctcccgaacgaaagtacggacgtttgtcctcgcagccaggcaccggcaaa
aggaatttaactcgcctcggttaa

>gi568815592r:137393355_137594170|GENSCAN_predicted_peptide_5|321_aa
MDGARSHYPRKTNTGTENQTPHVLTCYKTSEGQRLCLFTMLGVVLNTALYTDECQDDTGS
PVRNWIQNPDIRCKMRQRTSRQYPEVSRCCGQRQSRQLLERNSVAKAAEQWASGTERRAL
GVSLGWALVVSPQKEIRVPALLSSGPAPSRVQGSIRGTELRWRGSKRDSTKQDVRGDSAF
WAPASINPFYGKQSCGTFTHSPRLVVKPRNGWEVGELASKSTYWKEALNLGPPTLTHYGP
SKKQRVTEERRARHVPASEPGSPGLVPADLPFQAPLLLELKTLREEGRECPGLFGQRPSR
PFPAHRSPLGTGCGRRQPPLG

>gi568815592r:137393355_137594170|GENSCAN_predicted_CDS_5|966_bp
atggatggagctagaagccattatcctcggaaaactaacacaggaacagaaaaccaaaca
ccacatgttctcacttgttataaaacctcagaaggtcaaagactgtgtctgtttaccatg
cttggtgttgtattaaacacagcactatacacagatgaatgccaggatgatactggtagt
ccagtaagaaactggatccaaaacccagatattaggtgcaagatgagacaacgcacatca
cgtcaatatcctgaagtttcaaggtgctgtggtcaaaggcagagccggcagctgctggag
aggaactcggtggctaaggctgcggagcagtgggcgtcgggcaccgagcggcgcgcactg
ggtgtcagtctggggtgggcgttggtagtcagccctcagaaagaaatccgtgtgcctgcc
ctcctgagctccgggcctgctccttctcgggttcagggctcaatccgaggaactgagctg
cggtggcgggggtcgaaaagagactccacgaagcaagacgtgcggggcgactcagccttt
tgggccccggcgagtattaacccattttacggtaagcaaagttgtggcacctttactcac
tcccctcgtctagttgtcaagccccgcaacggatgggaagtgggggaactagcttctaaa
agtacttactggaaggaggccctgaaccttggaccacccacactcacgcattacggacct
tcgaaaaagcagagggtgaccgaggagcggagggcgcgccacgtcccggcctcggagcca
gggagtcccggcctggtccccgcagatctcccatttcaggcacctctgttactggagctg
aaaacccttagggaagaaggaagggaatgtcctggtctgttcgggcaaaggcccagtcgc
cccttcccggcccatcgcagccccctcggaaccggctgcggcaggcgtcagccccctctc
ggctga

>gi568815592r:137393355_137594170|GENSCAN_predicted_peptide_6|335_aa
MEIKKVFELNDNGDTTYQNLWDTAKAVLRGKFMALNACIKKTERAQTDTLRSHLKELEKQ
EQTKLKPSRISFFTSYSFTTCVGQSCPQTSGQTLDFSVPIHNGFHHQHPRPGHSAHIAID
LLNGFTFLSFKSLVSTLVICNQYKDSAYKYGLVSSSPCTLLPLHFPPGRYVAYKFRRKDE
AAILLLPCAGIGGPSVLQIYQQHESRKVSQTSGSGPERGQGYTSQKEGAGIEEVNMIKDD
RTVIHFNNPKVQASLSANTFAITGHAEAKPITEMLPGILSQLGADSLTILKKLAEQFPWQ
VLDSKAPKPEDIDEEEEDVLDPVEKSDKASKNEAK

>gi568815592r:137393355_137594170|GENSCAN_predicted_CDS_6|1008_bp
atggaaattaaaaaagtatttgaactgaacgacaatggtgatacaacctatcaaaacctc
tgggatacagcaaaggcggtgctaagaggaaagttcatggccctaaatgcctgcatcaag
aagactgaaagagcacaaactgacactctaaggtcacacctcaaggaactagagaaacaa
gaacaaaccaaactcaaacccagcagaatctctttcttcacctcttactccttcaccacc
tgtgttggacagagctgtcctcagacctcaggccaaacacttgacttcagtgtccccatc
cacaatggcttccatcaccagcatcccagaccaggtcactctgctcatatagcaattgat
ttgctgaatggattcactttcctgtccttcaagtcacttgtttcaacacttgtcatctgc
aaccagtacaaggactcagcctacaaatatggccttgtttcctcctcaccctgcacactg
ctaccacttcatttccctccaggtcgctatgtagcttacaagtttagaagaaaagatgag
gcagccatcttgctcttgccatgtgctggtattggaggaccctccgtgcttcagatttac
caacagcatgaatcaagaaaagttagccaaacttcaggctcaggtccggaaagggggcaa
gggtacacctcacagaaagaaggtgctggtattgaagaggtgaacatgattaaagatgat
aggacagttattcatttcaacaatcccaaagtccaagcttccctttctgctaataccttt
gcaattactggtcatgcagaagccaaaccaatcacagaaatgcttcctggaatattaagt
cagcttggtgctgacagcttaacaatccttaagaagttagctgaacagttcccatggcaa
gtcttggacagtaaagcaccaaaaccagaagacattgatgaggaggaggaggatgttcta
gatcctgtagaaaaatctgataaggcatcaaagaatgaagctaaataa

>gi568815592r:137393355_137594170|GENSCAN_predicted_peptide_7|220_aa
MTFCTGQGKRVLVGGNKCMVTKGSNNCVESAAQSPLGSSSLEKGKRLQFLVCVSNVSFPE
EHGQFLGQCDQYPGTAVICPEQCRSVENTCALAQKQQELRCSVLQQHKCGERRKRIKPDS
STGLNNNDLESFREESRFYSEGNAEQLKLYVEDPILSVTVFGDRAFKKSTQIHTTRSKKL
LNLRKQSDNNTIIVRNFDTPLTTLSSSSKQKINKETLDLD

>gi568815592r:137393355_137594170|GENSCAN_predicted_CDS_7|663_bp
atgacattttgtacaggacaaggaaaaagagttttggtgggtgggaacaagtgcatggtc
accaagggaagcaacaactgcgttgaatctgcagctcaatctcctttgggcagctcttcc
cttgagaaagggaagaggctgcagttccttgtctgtgtcagtaatgtgagctttccagag
gagcatggtcagttccttggacagtgtgatcagtacccaggtactgctgtgatctgtcct
gagcaatgtcgtagtgtggaaaacacgtgtgcgttggcccagaaacaacaagaactgaga
tgctcagttctgcagcagcacaagtgtggggagagaagaaagagaataaagccagacagc
agcactggcctgaataacaatgaccttgaaagcttcagggaggaatctagattttattct
gagggtaatgcggagcaattaaagttgtatgttgaagaccccattctcagtgtgactgta
tttggagacagggcctttaaaaagagcacccagattcatactactagatctaagaaactg
ctaaacctaagaaaacagagtgacaacaatacaataatagtgaggaactttgacaccccg
ctgacaacactaagcagttcatcaaagcagaagatcaacaaagaaactctggacttagac
tag