GENSCAN 1.0	Date run:  4-Nov-116	Time: 17:46:08

Sequence gi568815585r:41092206_41294257 : 202052 bp : 40.64% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.05 PlyA -   1206   1201    6                               1.05
 1.04 Term -  15529  14840  690  1  0   93   43   174 0.214   6.00
 1.03 Intr -  40446  38303 2144  1  2   12   65  2000 0.013 176.47
 1.02 Intr -  41911  41826   86  0  2   42  105    79 0.009   3.54
 1.01 Init -  78836  78565  272  2  2   49   91   282 0.419  21.09
 1.00 Prom -  84864  84825   40                              -5.95

 2.02 PlyA -  84990  84985    6                               1.05
 2.01 Sngl - 102052  99998 2055  1  0   96   36  2151 0.999 203.67
 2.00 Prom - 106902 106863   40                              -5.35

 3.00 Prom + 107036 107075   40                              -5.75
 3.01 Init + 121343 121419   77  1  2    1  101   111 0.495   4.31
 3.02 Term + 121529 121937  409  2  1   46   45   216 0.738   6.80
 3.03 PlyA + 122926 122931    6                               1.05

 4.12 PlyA - 123403 123398    6                               1.05
 4.11 Term - 125023 124910  114  1  0   84   36   125 0.963   4.49
 4.10 Intr - 131149 131051   99  1  0   76   85    88 0.989   6.69
 4.09 Intr - 134363 134227  137  0  2  107  110    70 0.995  10.47
 4.08 Intr - 141802 141685  118  1  1   58  115   155 0.999  14.32
 4.07 Intr - 148228 148056  173  2  2  110   76   218 0.744  21.54
 4.06 Intr - 149617 149491  127  1  1   36   -9   131 0.194  -2.47
 4.05 Intr - 155357 155092  266  0  2   33   38   302 0.228  16.01
 4.04 Intr - 160547 160440  108  0  0  125   66   112 0.788  12.04
 4.03 Intr - 160825 160744   82  1  1   57   78    68 0.945   0.99
 4.02 Intr - 162415 162324   92  2  2   93   92   100 0.999   9.69
 4.01 Init - 168501 168288  214  0  1   77   56   173 0.973  11.95
 4.00 Prom - 178854 178815   40                              -5.55

 5.04 PlyA - 178982 178977    6                               1.05
 5.03 Term - 195888 195629  260  1  2   67   44   177 0.489   5.93
 5.02 Intr - 196154 196073   82  2  1   69   37   122 0.632   3.49
 5.01 Init - 197603 197424  180  2  0   77   16   221 0.691  13.04

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl -  40306  38282 2025  1  0   96   44  1936 0.951 183.89


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815585r:41092206_41294257|GENSCAN_predicted_peptide_1|1063_aa
MRSLGQNPTEAELQDMINEVDADGNGTVDFPEFLTMMARKMKDTDSEEEIRDAFCVFDKD
GNGYISATELHHVMTNLGENLTDDEVDEMIRGNGKKSGLIVLTTVDSDERGRQWQGFTGG
LNSVNGLVLLSLRRRCYLSVSEGRLRRSQSRVLQRFSPSAPVAISTMQSREDAPRSRRLA
SPRGGKRPKKIHKPTVSAFFTGPEELKDTAHSAALLAQLKSFYDARLLCDVTIEVVTPGS
GPGTGRLFPCNRNVLAAACPYFKSMFTGGMYESQQASVTMHDVDAESFEVLVDYCYTGRV
SLSEANVERLYAASDMLQLEYVREACASFLARRLDLTNCTAILKFADAFGHRKLRSQAQS
YIAQNFKQLSHMGSIREETLADLTLAQLLAVLRLDSLDVESEQTVCHVAVQWLEAAPKER
GPSAAEVFKCVRWMHFTEEDQDYLEGLLTKPIVKKYCLDVIEGALQMRYGDLLYKSLVPV
PNSSSSSSSSNSLVSAAENPPQRLGMCAKEMVIFFGHPRDPFLCCDPYSGDLYKVPSPLT
CLAHTRTVTTLAVCISPDHDIYLAAQPRTDLWVYKPAQNSWQQLADRLLCREGMDVAYLN
GYIYILGGRDPITGVKLKEVECYNVKRNQWALVAPLPHSFLSFDLMVIRDYLYALNSKRM
FCYDPSHNMWLKCVSLKRNDFQEACVFNEEIYCICDIPVMKVYNPVRAEWRQMNNIPLVS
ETNNYRIIKHGQKLLLITSRTPQWKKNRVTVYEYDIRGDQWINIGTTLGLLQFDSNFFCL
SARVYPSCLEPGQSFLTEEEEIPSESSTEWDLGGFSEPDSESGSSSSLSDDDFWDSIFLL
LPFMVLGLGSNPAPRSEWVWGVERGQAVRADTPEPAGTGGGGWWGVGMCRVGLPLVPGSC
LFLEPEAQTCSCGCCSCSYTWKGRSYLFPALPRVQGGSDPLLHFGRLQPCPGGWGFCLLG
GVEQEAWICRCVFGSCSCTGSSHPNLEGAGLPLAPWSVQPQLHFPAAAGVMVAAPAITTV
HMRSLTRLDLGLPSVTCGISDYAPIHLPFHYLFYTRDTVDVLY

>gi568815585r:41092206_41294257|GENSCAN_predicted_CDS_1|3192_bp
atgaggtctcttgggcagaatcccacagaagcagagttacaggacatgattaatgaagta
gatgctgatggtaatggcacagttgacttccctgaatttctaacaatgatggcaagaaaa
atgaaagacacagacagtgaagaagaaattagagatgcattctgtgtgtttgataaggat
ggcaatggctatattagtgcaacagaacttcaccatgtgatgacaaaccttggagagaat
ttaacagatgacgaggttgatgaaatgatcagagggaatgggaagaagagtggcttgatt
gttttgactacggtggacagtgatgagagaggaagacagtggcagggtttcacaggaggg
ttgaattcagtaaatgggctcgtgctgctgtctcttcggagacgctgctatcttagcgtc
agcgagggaaggttgaggaggagccagagccgggtcctgcagcgtttctcgccatcagcg
cccgtcgccatctccaccatgcagtcccgggaagacgccccgcgctctcgccgcctagcc
agtccccgtggtgggaagcggcccaagaagattcacaaacccacagtttcggcctttttc
acgggtccagaggaattaaaggacacggcccattctgcagccctgctggcacagctcaag
tccttctacgatgcgcggctgctgtgtgatgtgaccatcgaggtggtgacgcctggcagc
gggcctggcacgggtcgcctgttcccctgcaaccgcaatgtgctggccgcggcatgtccc
tacttcaagagcatgttcacaggtggcatgtacgagagccagcaggccagcgtgaccatg
cacgatgtggacgccgagtccttcgaggtgttggtcgactactgctacacgggtcgtgtg
tctctcagtgaggccaacgtggagcgcctgtacgcggcctccgacatgctacagctggaa
tatgtgcgggaagcctgtgcctccttcttagcccgacgtcttgacctgaccaactgcacc
gccatcctcaagtttgcagatgcctttggccatcgcaagctgcgatcccaggcccagtcc
tatatagctcagaacttcaagcaactcagccacatgggttcaattcgggaggagactcta
gcagatctgaccctggcccagctgctggctgtcctgcgcttggatagtctggacgtggag
agtgagcagacagtgtgccatgtggcagtgcagtggctggaggctgctcccaaagagcgg
ggtcccagtgctgcagaagtcttcaagtgcgtgcgctggatgcacttcactgaagaagat
caggactacttagaagggctgctgaccaagcccatcgtgaagaagtactgcctggacgtt
attgaaggggccctgcagatgcgctatggtgacctgttgtacaagtctctggtgccagtg
ccaaacagcagcagcagcagtagcagcagcaactctcttgtatctgcagcagaaaatcca
ccccagagactgggtatgtgtgccaaggagatggtgatcttctttggacaccccagagat
ccctttctctgctgtgatccatactcgggggacctttacaaagtgccgtcacctttgacc
tgtctggctcacactaggactgtcaccactttagctgtctgtatctctcctgaccatgac
atctatctagctgctcagcccaggacagacctctgggtgtataaaccagctcagaatagt
tggcagcaacttgcagatcgcttgctgtgtcgtgagggcatggatgtggcatatctcaat
ggctatatctacattttgggggggcgagaccctattactggagttaagttgaaggaagtg
gaatgctacaatgttaagagaaaccagtgggcattggtggctccactgccccattctttt
ttatcctttgacctaatggtaattcgagactatctctatgctctcaacagtaagcgcatg
ttctgttatgatcctagccacaatatgtggctgaagtgcgtttctctgaagcgcaatgac
tttcaggaagcctgcgtcttcaatgaggagatctattgtatctgtgatatcccagtcatg
aaggtctacaacccagttagggcagaatggaggcaaatgaataatattcccttggtctca
gagaccaacaactacagaattatcaagcatggccaaaaattgttgctcatcacctctcgc
accccacagtggaaaaagaaccgggtgactgtgtatgaatatgatattaggggagaccaa
tggattaatataggtaccacattaggcctcttgcagtttgattctaactttttttgcctc
tctgctcgtgtttatccttcctgccttgaacctggtcagagtttcctcactgaagaagaa
gaaataccaagtgagtctagcactgaatgggacttaggtggattcagtgagccagactct
gagtcaggaagttcaagttctctttctgatgatgatttttgggactctatcttcctcctg
ctgccattcatggtcctggggcttggttccaaccctgctccgagatcagagtgggtgtgg
ggagtggagagaggccaggcagtgagagcagacacccctgagcctgcagggacaggtggt
gggggttggtggggggtagggatgtgtcgggtggggctcccgcttgtccctggctcctgc
ctgttcctggagccggaggcccagacctgcagctgcgggtgctgcagctgcagctacacc
tggaagggcagatcctacttgttcccagctctcccaagagtacagggaggctcggatcca
ttgctgcattttgggcggctgcagccctgcccaggagggtggggcttctgcctgctcggt
ggagtagagcaggaggcctggatctgcaggtgcgttttcggcagctgcagctgcacaggg
agctcccatcccaacttagaaggggccgggctcccccttgctccatggagtgtgcaaccc
cagctgcacttccctgctgcagccggcgtgatggtagcagcccctgccatcaccaccgta
cacatgaggtcattgacccgtctggatttaggtttaccatctgttacttgcggaatttca
gactatgctccaatccacctaccttttcattatttgttttacacaagggatactgttgat
gtcctctactag

>gi568815585r:41092206_41294257|GENSCAN_predicted_peptide_2|684_aa
MQSREDVPRSRRLASPRGGRRPKRISKPSVSAFFTGPEELKDTAHSAALLAQLKSFYDAR
LLCDVTIEVVTPGSGPGTGRLFSCNRNVLAAACPYFKSMFTGGMYESQQASVTMHDVDAE
SFEVLVDYCYTGRVSLSEANVQRLYAASDMLQLEYVREACASFLARRLDLTNCTAILKFA
DAFDHHKLRSQAQSYIAHNFKQLSRMGSIREETLADLTLAQLLAVLRLDSLDIESERTVC
HVAVQWLEAAAKERGPSAAEVFKCVRWMHFTEEDQDYLEGLLTKPIVKKYCLDVIEGALQ
MRYGDLLYKSLVPVPNSSSSSSSSNSLVSAAENPPQRLGMCAKEMVIFFGHPRDPFLCYD
PYSGDIYTMPSPLTSFAHTKTVTSSAVCVSPDHDIYLAAQPRKDLWVYKPAQNSWQQLAD
RLLCREGMDVAYLNGYIYILGGRDPITGVKLKEVECYSVQRNQWALVAPVPHSFYSFELI
VVQNYLYAVNSKRMLCYDPSHNMWLNCASLKRSDFQEACVFNDEIYCICDIPVMKVYNPA
RGEWRRISNIPLDSETHNYQIVNHDQKLLLITSTTPQWKKNRVTVYEYDTREDQWINIGT
MLGLLQFDSGFICLCARVYPSCLEPGQSFITEEDDARSESSTEWDLDGFSELDSESGSSS
SFSDDEVWVQVAPQRNAQDQQGSL

>gi568815585r:41092206_41294257|GENSCAN_predicted_CDS_2|2055_bp
atgcagtcccgggaagacgtcccgcgctctcgccgcctcgccagtccccgtggtgggagg
cggcccaagaggatttccaagccctcggtttcggcctttttcacgggtccagaggagtta
aaggacacggcccattctgcagccctgctggcacagctcaagtccttctacgacgcgcgg
ctgctgtgtgatgtgaccatcgaggtggtgacgcctggcagcgggcctggcacgggtcgc
ctcttttcctgcaatcgcaacgtgctagcagctgcgtgtccctacttcaagagcatgttc
acaggtggcatgtacgagagccagcaggccagcgtgaccatgcacgatgtggacgccgag
tccttcgaggtgttggtcgactactgctacacgggtcgtgtgtctctcagtgaggccaat
gtgcagcgcctgtacgcggcctccgacatgctacagctggaatatgtgcgggaagcctgt
gcctccttcttagcccgacgtcttgacctgaccaactgcaccgccatcctcaagtttgca
gacgccttcgaccatcacaagcttcgatctcaggcccagtcctacatagctcacaacttc
aagcagctcagccgaatgggttcaattcgggaggagactctagcagatctaaccctggcc
cagctgctggctgtcctacgcctggatagtctggacatagagagtgagcggactgtatgc
catgtagctgtgcagtggctggaggctgctgccaaagagcggggtcccagtgctgcagaa
gtcttcaagtgcgtgcgctggatgcacttcactgaagaagatcaggactacttagaaggg
ctgctgaccaagcccatcgtgaagaagtactgcctggacgttattgaaggggccctgcag
atgcgctatggtgacctgttgtacaagtctctggtgccagtgccaaacagcagcagcagc
agtagcagcagcaactctcttgtatctgcagcagaaaatccaccccagagactgggtatg
tgtgccaaggagatggtgatcttctttggacatcctagagatccctttctctgctatgac
ccttactcgggggacatttacacaatgccatcccctttgaccagctttgctcacactaag
actgtcacctcctcagctgtctgtgtgtccccagaccatgacatctatctagctgctcag
cccaggaaagacctctgggtgtataaaccagctcagaatagttggcagcaacttgcagat
cgcttgctgtgtcgtgagggcatggatgtggcatatctcaatggctacatctacattttg
gggggacgagaccctattactggagttaagttgaaggaagtggaatgctacagtgttcag
agaaaccagtgggcattggtggctcctgtccctcattccttctattcctttgaactcata
gtggttcagaactatctttatgctgtcaacagtaagcgcatgctttgctatgatcctagc
cacaatatgtggctgaactgtgcttctcttaaacgtagtgactttcaggaagcatgtgtc
ttcaatgatgaaatctattgtatctgtgacatcccagtcatgaaggtctacaacccagct
aggggagaatggaggcggattagtaatattcctttggattcagagacccacaactaccag
attgtcaatcatgaccaaaagttgcttctcatcacttctacaaccccacaatggaaaaag
aaccgagtgacagtgtatgagtatgatactagggaagatcagtggattaatataggtacc
atgttaggccttttgcagtttgactctggctttatttgcctttgtgctcgtgtttatcct
tcctgccttgaacctggtcagagttttattactgaggaagatgatgcacggagtgagtct
agtactgaatgggacttagatggattcagtgagctggactctgagtcaggaagttcaagt
tctttttcagatgatgaagtctgggtgcaagtagcacctcagcgaaatgcacaggatcag
cagggttctttgtaa

>gi568815585r:41092206_41294257|GENSCAN_predicted_peptide_3|161_aa
MFAQAVRLYNKQVVKPAKLVSVSSGWLAPKPQDKILHTLPSPFHKQRGLSLWPLPPLTHG
EFCQTTTSVHLRPKGSSVSCDKCCQAWNSPLRVVKSPLAQCRSRNAIQEPGPGDPKSPLV
LYTMAKLIPEAGMSESHSRSTAYCLCIAVGYSGPMGSLVSR

>gi568815585r:41092206_41294257|GENSCAN_predicted_CDS_3|486_bp
atgtttgcacaggccgtaaggctctacaataagcaggtggtgaagccagccaagcttgtg
tccgtctcttcaggatggctggcacccaaaccacaagacaaaatccttcacactcttccc
tcccctttccacaagcagaggggcctctccctatggcctctgccaccactgacccatggc
gaattctgtcagaccaccactagtgttcacttaaggcccaagggctcttcagtcagctgt
gacaaatgttgccaggcctggaactcacccctcagggtagtgaaatcccctctggcacag
tgcaggtccagaaatgctatccaagagcctggacctggggaccccaagagcccgttggtg
ctctacaccatggccaagctgatacctgaggctggcatgtccgagtctcactcaaggtcc
acagcatactgcctgtgcatcgctgttggttactcagggcccatgggctctttagtcagc
aggtga

>gi568815585r:41092206_41294257|GENSCAN_predicted_peptide_4|509_aa
MLWKHKALQKYMENLSKEYQTLEQCLQHIPVNEENRRSLNRRHAELAPLAAIYQEIQETE
QAIEELESMCKSLNKQDEKQLQELALEERQTIDQKINMLYNELFQSLVPKEKYDKNDVIL
EVTAGRTTGGDICQQFTREIFDMYQNYSCYKHWQFELLNYTPADYALLFRLYRRQVDPGE
MMDYRKLNQAVNPIAAAIPDVVSSVEQINIIPGTWYTAVDVANAFFSIPVNESQQKQFAF
IQQGHNTPSLSSVRLPNCCRYRGQQNRVTCTKNMQSAKTDCWKFYRSAAQVLHQIICGLH
HAAARISGDGVYKHLKYEGGIHRVQRIPEVGLSSRMQRIHTGTMSVIVLPQPDEVDVKLD
PKDLRIDTFRAKGAGGQHVNKTDSAVRLVHIPTGLVVECQQERSQIKNKEIAFRVLRARL
YQQIIEKDKRQQQSARKLQVGTRAQSERIRTYNFTQDRVSDHRIAYEVRDIKEFLCGGKG
LDQLIQRLLQSADEEAIAELLDEHLKSAK

>gi568815585r:41092206_41294257|GENSCAN_predicted_CDS_4|1530_bp
atgctctggaagcataaagcactacagaaatatatggagaacctgagtaaggagtaccaa
acacttgagcaatgtctgcagcatatccctgtgaatgaggaaaaccgaaggtccttgaac
agaaggcatgctgagttggcacctcttgcagccatttaccaagaaattcaggagactgaa
caagcaattgaagaattagaatcaatgtgtaaaagcctaaataaacaagatgaaaagcag
ttacaagaacttgcactggaagaaaggcaaaccattgatcaaaaaatcaacatgttgtac
aatgagcttttccagagccttgtgccaaaggagaaatatgacaaaaatgatgttatttta
gaggtgacagctggaaggactactggaggtgacatctgccaacaatttacccgagaaata
tttgacatgtaccagaattattcgtgctataaacactggcaatttgaacttctgaattat
acaccagcagattatgctctcctatttcgcctgtacagaagacaggtggatcctggagaa
atgatggattatcgaaagcttaaccaggcagtgaatccaattgcagctgctataccagat
gtggtttcatcagttgagcaaattaacataatccctggtacctggtatacagctgttgat
gtggcaaatgcctttttctccatccctgtcaatgaaagccagcagaagcagtttgctttc
atccagcaaggccacaatacaccttcattgtcctccgttaggctgcctaattgctgccga
tacagagggcagcagaacagggtgacttgcaccaagaatatgcagtctgcaaaaacagac
tgttggaaattctacaggtcagcagcccaagttcttcaccagatcatttgtggactacat
catgcagccgcccgaatttccggtgacggtgtctataagcatttgaagtatgagggtggg
attcaccgagttcagcgcatccccgaggtgggcctgtcctcaaggatgcagcgcattcac
acaggaacgatgtcggttattgtccttcctcagccagatgaggtggatgtgaaattggac
cccaaggatttgcgaatagatacatttcgagccaaaggagcaggagggcagcatgttaat
aaaactgatagtgccgtcagacttgtccacatccccacagggctagtagtagaatgccaa
caagaaagatcacagataaaaaataaagaaatagcctttcgtgtgttgagagctagactc
taccagcagattattgagaaagacaagcgtcagcaacaaagtgctagaaaactgcaggtg
ggaacaagagcccagtcagagcgaattcggacatataatttcacccaggatagagtcagt
gaccacaggatagcatatgaagttcgtgatattaaggaatttttatgtggtgggaagggc
ctggatcagctaattcagagactgcttcaatcagcagatgaagaagccattgctgaactt
ttggatgaacaccttaaatcagcaaaataa

>gi568815585r:41092206_41294257|GENSCAN_predicted_peptide_5|173_aa
MEKNWALFVDQCRLQALRFSVDLFDLLSILVRCDSFAGIQKAVVDQIGSRPSNSDHDLCL
CLTTTARAQRVTQVQAIKCVVVGDGATNIFLICFSLVSLASFENVCAEWHPEMQHHFPNT
PIILVGSKLDLNVVKDTIEKLKEKKLTPITYLQFLARNKEIGALKYLKCLALT

>gi568815585r:41092206_41294257|GENSCAN_predicted_CDS_5|522_bp
atggagaagaattgggccctatttgttgaccaatgccggctgcaggctttgcggttttca
gtggatctctttgatttgctgagcatacttgtcagatgtgatagttttgcagggattcag
aaagctgtcgtggatcagatcggcagcagaccatcaaacagtgaccatgacctttgtctg
tgcctaaccaccactgccagggcccagcgagtgacccaggtgcaagccatcaagtgtgtg
gtggttggagatggagctacaaacatatttttaatatgcttctcccttgtgagtcttgca
tcatttgaaaatgtctgtgcagagtggcatcctgaaatgcagcaccattttcccaacact
cccatcattcttgtgggaagtaaacttgatcttaatgttgttaaagacacgattgagaaa
ctgaaggagaagaagctgactcccatcacctatctgcagtttttagccaggaataaggag
attggcgctttaaaatacctgaagtgcttggctctcacatag