GENSCAN 1.0	Date run:  4-Nov-116	Time: 17:35:21

Sequence gi568815597f:63223059_63424492 : 201434 bp : 40.78% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   8446   8500   55  0  1   75   85    80 0.710   7.90
 1.02 Intr +  14914  14953   40  2  1  115   67    44 0.057   1.36
 1.03 Intr +  17507  17651  145  2  1   38   41   138 0.068   3.46
 1.04 Term +  17940  19433 1494  2  0  -16   43   565 0.058  31.15
 1.05 PlyA +  19765  19770    6                               1.05

 2.03 PlyA -  22643  22638    6                               1.05
 2.02 Term -  36568  36452  117  1  0  110   38    73 0.760   2.06
 2.01 Init -  39468  39142  327  0  0   59   98   236 0.998  19.07
 2.00 Prom -  40565  40526   40                              -4.65

 3.00 Prom +  40852  40891   40                              -8.05
 3.01 Init +  41404  41458   55  0  1   75   99   -20 0.882  -0.70
 3.02 Intr +  43897  44070  174  2  0   28   59   282 0.799  18.29
 3.03 Term +  63953  64356  404  0  2  -15   53   320 0.106  12.53
 3.04 PlyA +  64546  64551    6                               1.05

 4.00 Prom +  66054  66093   40                              -4.65
 4.01 Init +  67476  67569   94  2  1   38   87    60 0.167   1.49
 4.02 Intr +  93973  94143  171  2  0  -42   30   221 0.056   2.29
 4.03 Intr +  96508  96831  324  2  0    0   50   321 0.395  14.32
 4.04 Intr +  97030  97252  223  2  1   51   93   134 0.499   6.46
 4.05 Term +  99928 101437 1510  1  1    1   50  2071 0.704 183.59
 4.06 PlyA + 102050 102055    6                               1.05

 5.07 PlyA - 102085 102080    6                               1.05
 5.06 Term - 102798 102727   72  0  0   61   38    60 0.729  -4.77
 5.05 Intr - 103385 103254  132  2  0   83   59   110 0.891   7.52
 5.04 Intr - 104180 104009  172  1  1    3   90   166 0.468   7.32
 5.03 Intr - 105183 105051  133  1  1   97    3    74 0.702  -1.42
 5.02 Intr - 106071 105949  123  1  0   82   78    68 0.876   4.84
 5.01 Init - 107453 107285  169  2  1   72   23   187 0.853  10.34
 5.00 Prom - 108997 108958   40                              -6.55

 6.00 Prom + 119427 119466   40                              -7.95
 6.01 Init + 121557 121671  115  2  1   61   46   111 0.646   4.62
 6.02 Intr + 125171 125273  103  0  1   69   39   115 0.491   3.01
 6.03 Term + 127484 127604  121  2  1  114   38    52 0.460  -0.23
 6.04 PlyA + 127648 127653    6                               1.05

 7.04 PlyA - 128416 128411    6                               1.05
 7.03 Term - 137328 136871  458  1  2  -19   48   435 0.252  23.10
 7.02 Intr - 140047 139884  164  0  2   89   97   101 0.271   9.80
 7.01 Init - 144171 144098   74  0  2   61   38    93 0.089   2.19
 7.00 Prom - 145763 145724   40                              -5.85

 8.03 PlyA - 146268 146263    6                               1.05
 8.02 Term - 157317 157253   65  1  2   88   44    67 0.363  -0.63
 8.01 Init - 161266 161131  136  1  1   59   98   105 0.988   8.95
 8.00 Prom - 164804 164765   40                              -1.05

 9.00 Prom + 164910 164949   40                              -7.95
 9.01 Init + 166902 167292  391  2  1   32   42   234 0.480  10.18
 9.02 Term + 177946 178136  191  2  2   58   44   150 0.587   4.23
 9.03 PlyA + 178700 178705    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl +  17970  19433 1464  2  0   42   43   543 0.902  40.54


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597f:63223059_63424492|GENSCAN_predicted_peptide_1|577_aa
MTLDAGKDMEQQELYFIAACKRPTVGLYRVIVLNQEEVESLNRPITGSEIVAIINSLPTK
KSPGPDGFTAEFYQRYKEELHINRAKDKNHMIISIDAEKAFDKIQQPFMLKTLNKLGIDG
TYFKIIRAIYDKTTANIILNGQKLEAFPLKTGTRQGCPLSPLLFNIVLEVLARAIRQEKE
IKGIQLGKEEVRLSLFADDMIVYLENPIVSAQNLLKLISNFSKVSGYKINVQKSQAFLYT
NNRQPESQIMSELPFTIASKRIKYLGIQLTREVKDLFKENYKPLLKEIKEDTNKWKNIPC
SWVGRINIVKMAILPKVIYRFNAIPIKLPMTFFTELEKTTLKFIWNQKRARIAKSILSQK
NKAGGITLPDFKLYYKATVTKTAWYWYQNRDIDQWNRTEPSEIMPHIYNYLIFDKPEKNK
QWGKDSLFNKWCWENWLAICRKLKLDPFLTPYTKISSRWIKDLNVRPKTIKTLEENLGIT
IEDIGVGKDFMSKTPKAMATKAKIDKWDLIKLKSFCTAKETTIRVNRQPTTWEKIFATYS
SDKGLISRIYNELKQIYKKKTNNPIKKWAKDMNKVFN

>gi568815597f:63223059_63424492|GENSCAN_predicted_CDS_1|1734_bp
atgacactagatgctggcaaagatatggagcaacaggaactctatttcattgctgcttgc
aaacggcctactgtggggctttaccgtgtgatcgtactaaaccaggaagaagttgaatct
ctgaatagaccaataacaggctctgaaattgtggcaataatcaatagtttaccaaccaaa
aagagtccaggaccagatggattcacagccgaattctaccagaggtacaaggaggaactg
catataaacagagccaaagacaaaaaccacatgattatctcaatagatgcagaaaaagcc
tttgacaaaattcaacaacccttcatgctaaaaactctcaataaattaggtattgatggg
acgtatttcaaaataataagagctatctatgacaaaaccacagccaatatcatactgaat
gggcaaaaactggaagcattccctttgaaaactggcacaagacagggatgccctctctca
ccgctcctattcaacatagtgttggaagttctggccagggcaatcaggcaggagaaggaa
ataaagggtattcaattaggaaaagaggaagtcagattgtccctgtttgcagatgacatg
attgtttatctagaaaaccccatcgtctcagcccaaaatctccttaagctgataagcaac
ttcagcaaagtctcaggatacaaaatcaatgtacaaaaatcacaagcattcttatacacc
aacaacagacaaccagagagccaaatcatgagtgaactcccattcacaattgcttcaaag
agaataaaatacctaggaatccaacttacaagggaggtgaaggacctcttcaaggagaac
tacaaaccactgctcaaggaaataaaagaggacacaaacaaatggaagaacattccatgc
tcatgggtaggaagaatcaatatcgtgaaaatggccatactgcccaaggtaatttacaga
ttcaatgccatccccatcaagctaccaatgactttcttcacagaattggaaaaaactact
ttaaagttcatatggaaccaaaaaagagcccgcatcgccaagtcaatcctaagccaaaag
aacaaagctggaggcatcacactacctgacttcaaactatactacaaggctacagtaacc
aaaacagcatggtactggtaccaaaacagagatatagatcaatggaacagaacagagccc
tcagaaataatgccgcatatctacaactatctgatctttgacaaacctgagaaaaacaag
caatggggaaaggattccctatttaataaatggtgctgggaaaactggctagccatatgt
agaaagctgaaactggatcccttccttacaccttatacaaaaatcagttcaagatggatt
aaagatttaaacgttagacctaaaaccataaaaaccctagaagaaaacctaggcattacc
attgaggacataggcgtgggcaaggacttcatgtccaaaacaccaaaagcaatggcaaca
aaagccaaaattgacaaatgggatctaattaaactaaagagcttctgcacagcaaaagaa
actaccatcagagtgaacaggcaacctacaacatgggagaaaattttcgcaacctactca
tctgacaaagggctaatatccagaatctacaatgaactcaaacaaatttacaagaaaaaa
acaaacaaccccatcaaaaagtgggcgaaggacatgaacaaggttttcaattga

>gi568815597f:63223059_63424492|GENSCAN_predicted_peptide_2|147_aa
MVVSLTYDSPVKGVWSALGSVTIRRHGSQKATWIWLAKEPEIRVAPVAAANFSIACWLTF
LEDVTLTAAEFPNGNNGTSCQPKLLAGPLQIYHVDAITFPFVVYHLEVKGVALVIIVQHG
TSVMSCPMTHDLKAPRSCHVTFSLASH

>gi568815597f:63223059_63424492|GENSCAN_predicted_CDS_2|444_bp
atggtagtcagtttaacatacgatagccctgtgaaaggtgtgtggtcagccctgggatca
gtaaccatcagaagacatggctcccagaaggctacctggatctggttagcaaaggaacca
gaaataagagtggctccagtggcagcagcaaacttcagcatagcctgctggctgacattc
ctggaggatgtgacactgacagcagctgagtttccaaatggcaacaatggcacaagctgc
cagccaaagcttcttgcaggtcctcttcagatttatcatgtagatgccatcacttttcct
tttgtagtgtatcatttggaagtcaagggtgtggcccttgtcatcatagtccagcatgga
acttcagtcatgtcatgtcccatgacccatgacctcaaggctcccagaagctgccacgtg
acattttcacttgcatcccattag

>gi568815597f:63223059_63424492|GENSCAN_predicted_peptide_3|210_aa
MGLLNGTLPPCGIPLWGREQDPVSKEEGGVGEREGGGGGRGGGGRGGGEGEGKGEGGGRG
GEGEEGEEGGGGEGGGAWPLLIEAPGLYLQTRLVQASSCRPRIQVHPCRPRLQAYAYGQM
PGLSQFLASPCRLRLKTCLGGRLAPVGSGFRKAPMDTGSASALTDTISKPVATDSVNRST
PVDPGARPAPTDPESRIIPSDPSSRPAPVD

>gi568815597f:63223059_63424492|GENSCAN_predicted_CDS_3|633_bp
atggggttgctaaatggcacgttgcctccttgtggcataccattatgggggagagagcaa
gaccctgtctcaaaagaagaaggaggagtaggagaaagagaaggaggaggaggaggaaga
ggaggagggggaagaggaggaggagaaggagaaggaaaaggagaaggaggaggaagagga
ggagaaggggaagaaggagaagaaggaggaggaggagaaggaggaggagcttggcccctg
ttaattgaggctccagggctatacctgcaaaccaggctggtccaggccagctcctgcaga
cccaggatccaggtccacccctgtagacccaggctccaggcctatgcctatggacagatg
ccaggcctgtcccagtttctggccagcccctgcagactcaggctcaagacctgccttggt
ggcagattggccccagtgggctcaggattcaggaaagcccccatggacacaggctctgca
tctgccctcacagacacaatatctaagcctgttgcaacagactcagtcaacagatctacc
ccagtggaccctggtgccagaccagcccccacagacccagaatccaggatcattccatca
gacccaagctctaggcctgccccagtggactga

>gi568815597f:63223059_63424492|GENSCAN_predicted_peptide_4|773_aa
MCLNTIKATYDKPTASNKLNSEKLKAFPLRSEASESQANLPGRNKTEGLGAEVLPARPPE
GAERQRRTSRTLQEAGRLRRPKRRRTRGAANCNYAANNLFSPTSSRSPAGPCTASGSDPS
AGAASCVKASRNLPVALPGRRFASFPPPEVVQALWSAWREKAGGRFLSRERPRKNPLPPL
EIDIRPARARDVGAAARKKRNKWNRQLGVVRPPPPSPGRFQGDTGEWTDQAGPWQREGRR
QRPAAWRESRELASADGGIEIRLIWRLLRDRSVAAPEHPHRPLPPPRRRYQPRGGMTLSG
GGSASDMSGQTVLTAEDVDIDVVGEGDDGLEEKDSDAGCDSPAGPPELRLDEADEVPPAA
PHHGQPQPPHQQPLTLPKEAAGAGAGPGGDVGAPEADGCKGGVGGEEGGASGGGPGAGSG
SAGGLAPSKPKNSLVKPPYSYIALITMAILQSPQKKLTLSGICEFISNRFPYYREKFPAW
QNSIRHNLSLNDCFVKIPREPGNPGKGNYWTLDPQSEDMFDNGSFLRRRKRFKRHQQEHL
REQTALMMQSFGAYSLAAAAGAAGPYGRPYGLHPAAAAGAYSHPAAAAAAAAAAALQYPY
ALPPVAPVLPPAVPLLPSGELGRKAAAFGSQLGPGLQLQLNSLGAAAAAAGTAGAAGTTA
SLIKSEPSARPSFSIENIIGGGPAAPGGSAVGAGVAGGTGGSGGGSTAQSFLRPPGTVQS
AALMATHQPLSLSRTTATIAPILSVPLSGQFLQPAASAAAAAAAAAQAKWPAQ

>gi568815597f:63223059_63424492|GENSCAN_predicted_CDS_4|2322_bp
atgtgcctcaacacaataaaggccacatatgacaaacccacagctagcaataaactcaac
agtgagaagttgaaggcatttcctctaagatcagaggcatccgaaagccaggccaacttg
cctggacgtaacaagacggaagggctgggcgctgaggtcctgccagcccggccgccagag
ggagctgagcgccagaggaggacaagccgaacccttcaggaggccgggcgtctccggaga
ccgaagcgccggaggacccgaggagctgcaaactgcaactacgcggcaaacaatttattt
agcccgacatctagccggtctccggcaggaccctgcaccgcgtcgggatcggacccttcc
gctggggcggcctcctgcgtcaaggccagcaggaaccttcctgtcgccctccccggccgc
cgcttcgcctccttcccgcccccggaggttgtgcaggcgctatggtccgcctggagggag
aaagccggcggccggttcctgagccgagagcggccgcggaaaaatcctctgcctccgctg
gaaatcgatattaggccggcgcgggcgcgggacgtcggggccgcagccagaaaaaagcgc
aacaaatggaaccggcagctgggagttgttcgtcctccacccccttccccagggaggttc
caaggagacaccggggaatggacggatcaggctgggccgtggcagagggagggtaggagg
cagcgaccagcagcgtggagggagtccagagagctagcctctgcggacggcggaatcgaa
attaggctcatttggagactacttcgagaccgctccgtggcagcccccgaacaccctcat
cgcccgctgccccctccccgccgccgctaccaaccccgaggagggatgaccctctccggc
ggcggcagcgccagcgacatgtccggccagacggtgctgacggccgaggacgtggacatc
gatgtggtgggcgagggcgacgacgggctggaagagaaggacagcgacgcaggttgcgat
agccccgcggggccgccggagctgcgcctggacgaggcggacgaggtgcccccggcggca
ccccatcacggacagcctcagccgccccaccagcagcccctgacattgcccaaggaggcg
gccggagccggggccggaccggggggcgacgtgggcgcgccggaggcggacggctgcaag
ggcggtgttggcggcgaggagggcggcgcgagcggcggcgggcctggcgcgggcagcggt
tcggcgggaggcctggccccgagcaagcccaagaacagcctagtgaagccgccttactcg
tacatcgcgctcatcaccatggccatcctgcagagcccgcagaagaagctgaccctgagc
ggcatctgcgagttcatcagcaaccgcttcccctactacagggagaagttccccgcctgg
cagaacagcatccgccacaacctctcactcaacgactgcttcgtcaagatcccccgcgag
ccgggcaacccgggcaagggcaactactggaccctggacccgcagtccgaggacatgttc
gacaacggcagcttcctgcggcgccggaaacgcttcaagcgccaccagcaggagcacctg
cgcgagcagacggcgctcatgatgcagagcttcggcgcttacagcctggcggcggcggcc
ggcgccgcgggaccctacggccgcccctacggcctgcaccctgcggcggcggccggtgcc
tattcgcacccggcagcggcggcggccgcggctgctgcggcggcgctccagtacccgtac
gcgctgccgccggtggcaccggtgctgcctcccgctgtgccgctgctgccctcgggcgag
ctgggccgcaaagcggccgccttcggctcacagctcggcccgggcctgcagctgcagctc
aatagcctgggcgccgccgcggccgctgcgggcacagcgggcgccgcgggcaccaccgcg
tcgctcatcaagtccgagccaagcgcgcggccgtcgttcagcatcgagaacatcataggt
gggggccccgcggctcctgggggctcggcggtgggcgctggggtcgccggcggcactggg
ggttcagggggcggcagcacggcgcagtcgtttctgcggccacccgggaccgtgcagtcg
gcagcgctcatggccacccaccaaccgctgtcgctgagccggacgactgccaccatcgcg
cccattcttagcgtgccactctccggacagtttctgcagcccgcagcctcggccgccgcc
gctgctgcggccgccgctcaagccaaatggccggcgcaatag

>gi568815597f:63223059_63424492|GENSCAN_predicted_peptide_5|266_aa
MQGGKEPKLSPSIRRAPQLRSLDPGKEHGKRGVRRGGSGGAGDGGECASRCRFAAWGSKE
WLVHSSEGKEGEWRREKLALGVTLPTVGGQQGEGGLLTCTTGDTGGVRGHKALEPTFFQI
TYPSGQFLKGLTLKIPTSHTLMFKKLKRKRAFEGATAGPIFLTSARTLNNRWQLEGLGPR
VSCLPRHKGRGPSLGRRSRDPDPEGMFTQDTIMFTVYQENRLGICKEVSFKATPSPRRQR
RNEKGFGLEGEEASIGPLQKSNYVVD

>gi568815597f:63223059_63424492|GENSCAN_predicted_CDS_5|801_bp
atgcagggaggaaaagaaccaaagctctccccttcaataagacgtgcaccgcagctccgg
tccctggaccccgggaaggagcatggcaaacgcggagtccgcagaggcggaagcggcggg
gccggggatggcggagagtgtgcttctcgctgccggttcgcggcctgggggagcaaagaa
tggcttgtacattcctcagagggcaaggagggggagtggcgaagagagaagttggctctg
ggtgtaactctgccaactgttggagggcagcaaggggagggtggtcttttaacttgtacc
accggggacacaggtggagtccggggacacaaggctctggaacccactttctttcagatc
acatacccctcaggacagtttctcaagggactcacgttaaaaatacccacctctcacaca
ctcatgtttaaaaagcttaaacgaaaaagagcttttgagggtgcgacggccgggcccatc
ttcctgacatctgccaggactttaaacaaccgctggcagcttgagggtctgggtccgaga
gtttcctgccttccacgacataaaggaaggggaccatctttaggccgtcgttcaagggac
cctgatcccgaaggaatgtttactcaagacacaataatgtttaccgtttaccaggaaaac
agattgggtatttgcaaggaagtgtctttcaaagcgacccccagcccacgtcgacagcgg
agaaatgagaaaggctttgggttggagggagaggaagcatctataggaccccttcagaaa
tccaattatgttgtggattga

>gi568815597f:63223059_63424492|GENSCAN_predicted_peptide_6|112_aa
MKEEQQYRLKTKNLEDKVVGARSNRHEKPLGLSREVEKEAEVIERERFEDTVVLALKMKE
GAMSQGMQTAFRRLTWASLYDASVQREQEQTLQGFLRPRLQRSSYNTSATFY

>gi568815597f:63223059_63424492|GENSCAN_predicted_CDS_6|339_bp
atgaaagaggagcagcaatatagactaaagaccaagaacttagaagacaaagtagttgga
gccagaagcaaccgccatgagaagcccctaggtctttccagagaggttgagaaggaagca
gaggttatagaaagagaaagatttgaagatactgtggtgctagctttgaagatgaaggaa
ggagccatgagccaaggaatgcagacagcttttagaaggttaacctgggcttctttgtac
gatgccagtgttcaaagagagcaagagcagacgctgcaaggtttcctgaggcctagactc
cagaggagctcatacaacacttctgccacattctattag

>gi568815597f:63223059_63424492|GENSCAN_predicted_peptide_7|231_aa
MPAKKKTGQPPKVRNIEHPTICESLKFRKLFTRQLTSQREHSKRQRQKLQISYTPALQVT
QQPSHDTRRVEIDSASQWEAKLYYNWVMVNSKLRKLDNAIQDCTNTVKLNDTYLKACLRR
AQCYMNTKQYEEAVHNYEKVYQTEKTKEHKQLLKNAQLKLKKSKKKDYYKILGVDNNASE
DETKKAYHKWALMHHPDWHSGGSAEVQKEEGKFKEIGEAFTIFSDPKKKTR

>gi568815597f:63223059_63424492|GENSCAN_predicted_CDS_7|696_bp
atgcctgcgaagaagaagactgggcagccccctaaagtaagaaacattgaacatccaacc
atttgcgagagcctaaagtttcgcaaactttttacacggcagctcacttcccagagagag
cattccaagcggcaaaggcaaaagttgcagatctcttacaccccagccttacaagtcaca
cagcaacctagccatgatacaaggagagtggaaatagattctgcctctcagtgggaagct
aaactctactataattgggttatggttaattctaagcttaggaaactagataatgcaata
caagactgcacaaatacagtgaagctcaatgacacctatttaaaagcctgcttgagaaga
gctcagtgttacatgaacaccaaacagtatgaagaagcagtgcacaattatgaaaaagtg
tatcagacagagaaaacaaaagaacacaaacagctcctaaaaaatgcacagctgaaactg
aagaagagtaagaagaaagattactacaagattctgggagtggacaataatgcctctgag
gacgagaccaagaaagcttatcacaaatgggccttgatgcaccatccagattggcacagt
ggaggcagtgctgaggttcagaaggaggaggggaagttcaaggaaattggagaggccttt
accatcttctctgatcccaagaaaaagactcgctag

>gi568815597f:63223059_63424492|GENSCAN_predicted_peptide_8|66_aa
MGKRSEYTFFKRRHTNGKQEYEKVLNITDDQRNANQNYNETSSHPATKLLPFFRSRTNVL
KVAMSI

>gi568815597f:63223059_63424492|GENSCAN_predicted_CDS_8|201_bp
atgggcaaaagatctgaatacacatttttcaaaagaagacatacaaatggcaaacaggaa
tatgaaaaagtgctcaacatcactgatgatcagagaaatgcaaatcaaaactacaatgag
acatcatctcacccagccaccaaactacttcctttcttccgttcacgaacaaacgtcctg
aaagttgctatgtccatttga

>gi568815597f:63223059_63424492|GENSCAN_predicted_peptide_9|193_aa
MGAGGGVTKVPVWPSHWDCATSDLKLAQHWVLPKACGSHCLIPADVHSRPKGSSSAGIES
SQAYALSLGWQLPQSTAYVGSEMLSGSQGLELGTLIRSQAWNPGLQESAWCCAPLWPEAR
AWNVGLRTLPDSSCQKGLQLTQRFLDSLLLGFKSQPDMEPKIVHMDVSGGTMATSWYHTV
VLYAQMSWLSTMP

>gi568815597f:63223059_63424492|GENSCAN_predicted_CDS_9|582_bp
atgggagctggaggaggggtgacaaaagtacccgtgtggccatcacattgggactgtgct
acatcagacctgaagctagcacagcactgggtcttacccaaggcctgcggcagtcactgc
ctgattcctgccgatgttcactcaaggcccaagggttcttcatcagcaggtattgaatcc
agccaggcttatgccctttccttagggtggcagcttccccagtccacagcctatgttggg
tcagaaatgctgtctgggagccaaggcctggagttaggaaccttaatcaggagccaggcc
tggaatccgggactccaggagtctgcctggtgctgtgctccactgtggcctgaagctagg
gcctggaatgtgggcctcaggactctgcctgattcaagctgccaaaaggggctccaacta
acccagagattcttagactcgctgcttcttggcttcaagtcccagccagacatggaaccc
aagattgttcacatggatgtttctggagggacaatggccaccagctggtaccatactgta
gtactctatgcccagatgtcttggctgtctaccatgccttga