GENSCAN 1.0	Date run:  4-Nov-116	Time: 17:34:03

Sequence gi568815575r:133117045_133318259 : 201215 bp : 42.14% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   1153   1315  163  0  1   83   89    40 0.055   2.23
 1.02 Intr +   1641   1758  118  1  1   44   87    32 0.044  -2.70
 1.03 Intr +  17385  17472   88  0  1   52   86    89 0.162   4.15
 1.04 Intr +  21316  21409   94  0  1   59  116    49 0.159   3.42
 1.05 Intr +  32502  32554   53  1  2   74   72    38 0.001  -1.49
 1.06 Intr +  43395  43474   80  2  2   65  100    44 0.076   0.73
 1.07 Term +  43526  43886  361  2  1   11   49   339 0.114  15.32
 1.08 PlyA +  44014  44019    6                              -0.45

 2.00 Prom +  44050  44089   40                              -9.55
 2.01 Sngl +  44725  45564  840  0  0   33   42   312 0.725  16.59
 2.02 PlyA +  45572  45577    6                               1.05

 3.08 PlyA -  47702  47697    6                               1.05
 3.07 Term -  50733  50659   75  0  0   83   42    39 0.111  -4.34
 3.06 Intr -  52012  51940   73  0  1   57   94    30 0.089  -1.01
 3.05 Intr -  54997  54872  126  0  0   77   91   106 0.415   8.67
 3.04 Intr -  55174  55099   76  2  1   66   98    50 0.153   1.45
 3.03 Intr -  68499  68422   78  1  0  145   96    71 0.661  12.20
 3.02 Intr -  74217  74083  135  1  0   38   92   132 0.872   8.22
 3.01 Init -  82932  82758  175  0  1   63   20   130 0.532   3.26
 3.00 Prom -  82986  82947   40                              -1.35

 4.02 PlyA -  83257  83252    6                               1.05
 4.01 Sngl - 101215  99998 1218  1  0   79   45  1357 0.893 126.05
 4.00 Prom - 105871 105832   40                              -6.15

 5.00 Prom + 108778 108817   40                              -3.55
 5.01 Init + 115890 115959   70  2  1   81  106    -6 0.438   1.76
 5.02 Intr + 116444 116469   26  0  2  146   45   -15 0.368  -3.17
 5.03 Intr + 117488 117681  194  1  2  126   27    79 0.087   2.97
 5.04 Intr + 118278 118360   83  0  2  107   75    44 0.102   3.36
 5.05 Intr + 131337 131401   65  1  2   76  105    71 0.399   5.12
 5.06 Term + 131884 132093  210  0  0   36   42   136 0.320   0.11
 5.07 PlyA + 132652 132657    6                               1.05

 6.05 PlyA - 132783 132778    6                               1.05
 6.04 Term - 137508 137169  340  2  1   63   49   312 0.505  17.82
 6.03 Intr - 148488 148354  135  2  0   31   97   146 0.518   8.56
 6.02 Intr - 151932 151811  122  0  2   -3   68   118 0.257  -0.93
 6.01 Init - 152292 152260   33  0  0   71  115    12 0.382   2.13
 6.00 Prom - 156000 155961   40                              -5.65

 7.00 Prom + 159602 159641   40                              -5.75
 7.01 Sngl + 162927 163355  429  2  0   79   48   294 0.988  20.53
 7.02 PlyA + 163620 163625    6                              -0.45

 8.00 Prom + 164367 164406   40                              -6.15
 8.01 Init + 165325 165488  164  0  2   70   77    59 0.150   2.26
 8.02 Intr + 168157 168214   58  1  1  129   81    55 0.583   6.87
 8.03 Intr + 176251 176395  145  0  1   87   70    85 0.389   5.53
 8.04 Term + 176876 176973   98  0  2   88   39    37 0.138  -4.05
 8.05 PlyA + 179152 179157    6                               1.05

 9.07 PlyA - 181132 181127    6                               1.05
 9.06 Term - 186297 185823  475  2  1   61   31   516 0.515  36.57
 9.05 Intr - 187817 187681  137  2  2   66   92   188 0.999  15.45
 9.04 Intr - 188874 188728  147  0  0   87   93   187 0.951  18.61
 9.03 Intr - 189110 188980  131  0  2   40   90   144 0.171   9.29
 9.02 Intr - 196147 195960  188  0  2  106   35    62 0.098   1.11
 9.01 Intr - 196566 196422  145  1  1   90   38    72 0.075   0.82

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term -  29020  28955   66  1  0  110   39    99 0.947   4.16


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815575r:133117045_133318259|GENSCAN_predicted_peptide_1|318_aa
CLLCKTALDGLVFLLCSKHDKICQQKKMEELHEEGGFSYWCAVGLVLFLSVSDAAPWMVV
VSCLSSDCRLSLPRNTVKFSIIQWFASTPFPQPCPKGSGHTLKHHSVGYSDDVMLIGPDK
EEVQLTEATWMAVINYKENLSEYSPFPSSVPCPKGHLGEGIFYQWPFKDIVQDHNSSPAK
EQNWTENEFDKLTEVGFRSKEAKNLEKRLEELLTRISSSEKNMNDLMELKNTGRKLREAY
TSFNSQINQAEERISVIEDQLDEIKTEDKIREKRIKRNEQSLQEIRDYVKRPNLSLIGVH
ERDEENGTKLENTLQDIT

>gi568815575r:133117045_133318259|GENSCAN_predicted_CDS_1|957_bp
tgtctgctctgcaaaactgcactggatggtttagtattcctcctttgtagtaaacatgat
aagatttgtcagcagaagaagatggaggaattgcatgaggaaggaggcttctcttactgg
tgcgctgtgggtttggttttgtttttgtcagtcagtgatgcagcaccctggatggttgtt
gtttcctgtttgtccagtgactgcagactctcactgcccagaaacacagtgaaattctcc
atcatccagtggtttgcatccacaccttttcctcagccttgtccaaagggatctggacat
accttgaaacatcactcagtgggctatagtgatgacgtcatgctaattggaccagataag
gaagaagtacagttaactgaagccacatggatggctgtgatcaactacaaagaaaaccta
tctgagtactcccccttccccagttcagtcccctgtcccaaaggccatctgggagaggga
atattttaccagtggccttttaaagatatcgtgcaggatcacaactcttcaccagcaaag
gaacaaaactggacggagaatgagtttgacaaattgacagaagtaggcttcagaagcaag
gaagctaaaaacctagaaaaaaggctagaggaattgctaactagaataagcagttcagag
aagaacatgaatgacctgatggagctgaaaaacacaggacgaaaacttcgtgaagcatac
acaagtttcaatagccaaatcaatcaagcagaagaaaggatatcagtgattgaagatcaa
cttgatgaaataaagacagaagacaagattagagaaaaaagaataaaaaggaatgaacaa
agcctccaagaaatacgggactatgtaaaaagaccaaacctaagtttgattggtgtacat
gaaagagacgaggagaatggaaccaaattggaaaacactcttcaggatattacctag

>gi568815575r:133117045_133318259|GENSCAN_predicted_peptide_2|279_aa
MLKGSMQQEELTIINVYAPNTGAPIFKKQVLRDLQRDLRSHTITVGDFNTPLSILDRSTR
QKINKDILDLNSALDQMDLIDIHRTLHLKSTEYTFFSAPHRTYSKTDHIIGSKILLSKCK
RTEIITNSLSDHSAIKLELRIKKLTQNSTTTWKLNNLLLNDYWVNNKIKAEIKMFFETNE
NEDTTNQNLWDTFKAVCRGKFTALNAHKRKQETSKMDTLTSQLKELEKQEQTNSKSSRRQ
EITKIRAELKEIETRKTLQKKLMNPGAGFLKRSTKEIDH

>gi568815575r:133117045_133318259|GENSCAN_predicted_CDS_2|840_bp
atgctaaagggatcaatgcagcaagaagagctaactatcataaatgtatatgcacccaat
acaggagcacccatattcaaaaagcaagttcttagagacctacaaagagacttacgctcc
cacacaattacagtgggagactttaacaccccactgtcaatattagacagatcaacaaga
cagaaaattaacaaggatattctggacttgaactcagctctggaccaaatggacctaata
gacatccacagaactctccacctcaaatcaacagaatatacattcttctcagcacctcat
cgcacttattctaaaactgaccacataattggaagtaaaatactcctcagcaaatgcaaa
agaacagaaatcataacaaacagtctctcagatcacagtgcaatcaaattagaactcagg
attaagaaactcactcaaaacagcacaactacatggaaactgaacaacctgctcctgaat
gactactgggtaaataacaaaattaaggcagaaataaagatgttctttgaaaccaatgag
aacgaagacacaacgaaccagaatctgtgggacacatttaaagcagtgtgtagagggaaa
tttacggcactaaatgcccacaagagaaagcaggaaacatctaaaatggacaccctaaca
tcacaattaaaagaactagagaagcaagagcaaacaaattcaaaatctagcagaagacaa
gaaataactaagatcagagcagaactgaaagagatagagacacgaaaaacccttcaaaaa
aaattaatgaatccaggagctggttttttgaaaagatcaacaaaagagatagaccactag

>gi568815575r:133117045_133318259|GENSCAN_predicted_peptide_3|245_aa
MDKDFMTKTPKAITTKAKINKLDLIKLKSSCTAKEAVNTVNRQPTEWEKIFANYAADKGF
RFLEPWVSAGAPEAFAGVVLCGKIGLRPSVGPVSRSTCYAVCRGLFLSSAKDGVLATQPQ
KFRPADNLKESTGEFTEVASLFWVFLQMATEWQSSSLSAAMDPLETKTGLFVSGLPVAKA
THLSEPLQELYEGIITRSNGLHRCRSSADGEEDLTKLGLCQADIQSETPVDLYSLSLANH
SVSTA

>gi568815575r:133117045_133318259|GENSCAN_predicted_CDS_3|738_bp
atggacaaagatttcatgacaaagacaccaaaagcgatcacaacaaaagcaaaaattaat
aagttagatctaattaaacttaagagctcctgcacagcaaaagaagctgtcaacacagta
aacagacaacctacagaatgggagaaaatatttgcaaactatgcagctgacaaaggtttc
aggttcctggagccctgggtctcagcaggagccccagaggcctttgcaggagttgttctt
tgtggcaagattggtttaaggccctcggtgggccccgtgtctaggagcacctgctacgct
gtttgcagaggacttttccttagttcagctaaagatggggtccttgctacacagccacaa
aaatttaggcctgcagacaatttgaaggaaagcactggagagtttacggaagtggcatct
ctcttctgggtatttctccaaatggccactgagtggcagtccagctctctgagtgctgcc
atggacccactggagacaaagacagggttatttgtcagtggcctgccagtagcaaaggcc
acacatctttcagagcccctccaagaactgtatgagggtattataaccaggtccaatggg
ttgcacaggtgcagatccagtgctgatggagaggaggatttaaccaagctgggactttgt
caggctgatatacagagtgagacacctgttgacctatactcgctgagcctagccaatcat
tcagtgtctacagcttaa

>gi568815575r:133117045_133318259|GENSCAN_predicted_peptide_4|405_aa
MAKYVSLTEANEELKVLMDENQTSRPVAVHTSTVNPLGKQLLPKTFGQSSVNIDQQVVIG
MPQRPAASNIPVVGSPNPPSTHFASQNQHSYSSPPWAGQHNRKGEKNGMGLCRLSMKVWE
TVQRKGTTSCQEVVGELVAKFRAASNHASPNESAYDVKNIKRRTYDALNVLMAMNIISRE
KKKIKWIGLTTNSAQNCQNLRVERQKRLERIKQKQSELQQLILQQIAFKNLVLRNQYVEE
QVSQRPLPNSVIHVPFIIISSSKKTVINCSISDDKSEYLFKFNSSFEIHDDTEVLMWMGM
TFGLESGSCSAEDLKMARNLVPKALEPYVTEMAQGTFGGVFTTAGSRSNGTWLSASDLTN
IAIGMLATSSGGSQYSGSRVETPAVEEEEEEDNNDDDLSENDEDD

>gi568815575r:133117045_133318259|GENSCAN_predicted_CDS_4|1218_bp
atggcaaaatatgtcagtctcactgaagctaacgaagaactcaaggtcttaatggacgag
aaccagaccagccgccccgtggccgttcacacctccaccgtgaacccgctcgggaagcag
ctcttgccgaaaacctttggacagtccagtgtcaacattgaccagcaagtggtaattggt
atgcctcagagaccagcagcatcaaacatccctgtggtaggaagcccaaacccacccagc
actcactttgcctctcagaaccagcattcctactcctcacctccttgggccgggcagcac
aacaggaaaggagagaagaatggcatgggcctgtgccgtctttccatgaaggtctgggag
acggtgcagaggaaagggaccacttcctgccaggaagtggtgggcgagctggtcgccaag
ttcagagctgccagcaaccacgcctcaccaaacgagtcagcttatgacgtgaaaaacata
aaacggcgcacctacgatgccttaaacgtgctgatggccatgaatatcatctccagggag
aaaaagaagatcaagtggattggtctgaccaccaactcggctcagaactgtcagaactta
cgggtggaaagacagaagagacttgaaagaataaagcagaaacagtctgaacttcaacaa
cttattctacagcaaattgctttcaagaacctggtgctgagaaaccagtatgtggaggag
caggtcagccagcggccgctgcccaactcagtcatccacgtgcccttcatcatcatcagc
agtagcaagaagaccgtcatcaactgcagcatctccgacgacaaatcagaatatctgttt
aagtttaacagctcctttgaaatccacgatgacacagaagtgctgatgtggatgggcatg
acttttgggctagagtccgggagctgctctgccgaagaccttaaaatggccagaaatttg
gtcccaaaggctctggagccgtacgtgacagaaatggctcagggaacttttggaggtgtg
ttcacgacggcaggttccaggtctaatggcacgtggctttctgccagtgacctgaccaac
attgcgattgggatgctggccacaagctccggtggatctcagtacagtggctccagggtg
gagaccccagcagtcgaggaggaagaggaggaggacaacaacgatgacgacctcagtgag
aatgacgaggatgactga

>gi568815575r:133117045_133318259|GENSCAN_predicted_peptide_5|215_aa
MAGPVILELFVSFTEFSIVIPKESLSSIHTSYVMGSLAATRWGIWENIRVGCNVVLKTPG
SVSMGLDVVERPQICTWGFALVRLPMFCKFQCKEITNCLAAAIPTMFSWGSAKTEKLDKK
QCCTGLSTARRLEEALKWPCSNNQYLVFCMSDRRLHLDLPTAPVAPPRSDQSKRTASTPY
YFISDPNSQHCPYLSSLSSKLSEKLLTSEPSMKLI

>gi568815575r:133117045_133318259|GENSCAN_predicted_CDS_5|648_bp
atggctgggcctgttatcctagaattatttgtatctttcacagaatttagcatagttata
cctaaagaaagtctcagctcaatacacacttcctatgtaatgggctctcttgctgctacc
aggtggggaatatgggaaaacattagagttgggtgcaatgtagtgttgaaaacaccggga
tcagttagcatggggctggatgttgtagaaaggccccagatttgtacttgggggtttgca
cttgttaggttgccaatgttctgcaaattccagtgcaaagaaataacaaattgcttagca
gcagcaatacccacaatgttctcctggggttcagcaaaaacagaaaagctggacaagaaa
caatgctgtacaggactttcaactgccagaaggctagaagaggcccttaagtggccttgc
tctaataatcagtacctggttttttgcatgtctgaccgaaggctccacctggacctgcca
actgctcctgtggccccacccagaagcgatcagtccaagaggacagcttcaactccctat
tatttcatctctgacccaaacagtcagcactgtccataccttagctccctgtccagcaaa
ctatctgaaaaactcctaacatctgaaccttccatgaaactgatttga

>gi568815575r:133117045_133318259|GENSCAN_predicted_peptide_6|209_aa
MLIEVSYPSLKGSVQECAVGSLCTKAWGGHSLVSGPEVDAVSIVESQGKSELGKEPDCQE
CSGIPLRLEPRSRKCAECHLLKHTGLCTEKLFALQQSVSVNDYVTFGNVDLLRGPMVILH
KPQRSNGPKPLGFGGGNTVHYLQDSTDSVVGFVKYAIKKEIKNTRLNMKEEEEKIKALEF
YFQVAKCSCPDFPLTSGRSLETGTEWDSE

>gi568815575r:133117045_133318259|GENSCAN_predicted_CDS_6|630_bp
atgcttatagaggtttcctatccaagcctgaagggttctgttcaagaatgtgctgtggga
tccctctgcaccaaggcttggggtggccacagcctggtgagtggcccagaggtggatgct
gttagcatcgttgagagtcaagggaagtcagaattaggaaaggagccggactgtcaagaa
tgcagtggaatcccgctgaggctggagcctcggtcgagaaaatgtgcggaatgccatttg
ttaaaacacactggcctttgcacagaaaagctctttgcgcttcaacaaagcgtgagtgtc
aatgattatgtgacttttggaaatgtagatcttcttcgggggcccatggtgattttgcat
aaaccacagaggtcaaatgggcccaagcctcttgggtttggaggaggaaacacagtgcat
tatttacaagattccaccgattcagtagttgggtttgtcaaatatgcaataaagaaggaa
attaaaaacacaagattaaatatgaaggaagaagaagaaaagatcaaagccttggagttt
tacttccaagttgcaaagtgcagctgtccggacttccccctgacctccggtcgctccttg
gagacagggactgaatgggactctgaatag

>gi568815575r:133117045_133318259|GENSCAN_predicted_peptide_7|142_aa
MRKNQCKKAENSKNQKASSPPKDHNSSPAREKNWTENEFGKLREVGSRRWVITNFSELKE
HALTQCKKVKNLEKRLEELLTRISSLEKNINDLMELKNKHEIFVKHTQVSIAKSIKQKKG
YQRSKINFMKYSGKTRLEKKEE

>gi568815575r:133117045_133318259|GENSCAN_predicted_CDS_7|429_bp
atgaggaaaaaccagtgcaaaaaggctgaaaattccaaaaaccagaaagcctcttctcct
ccaaaggatcataactcctcaccagcaagggaaaaaaactggacagagaatgagtttggc
aaattgagagaagtaggctccagaaggtgggtaataacaaatttctctgagctaaaggag
catgctctaacccaatgcaagaaagttaagaaccttgaaaaaaggttagaggaattgcta
actagaataagcagtttagagaagaacataaatgacctaatggagctgaaaaacaagcat
gagatctttgtgaagcatacacaagtatcaatagccaaatcaatcaagcagaagaaagga
tatcagagatcaaagatcaacttcatgaaatacagtgggaagacaagattagaaaaaaaa
gaagaatga

>gi568815575r:133117045_133318259|GENSCAN_predicted_peptide_8|154_aa
MDKFLDTYTLPSLKEEEVESLNRPITSSEIEAVINSLPTKKSPGPDGFTAKFYQRTEMAV
EVHWQVRSKSLMEKLGGQSRIEWPKTSGISGMTLAVGVRVGHLEAMFEDVAKICACDWPE
FKDHTLSHLPALTLTIQTSQCFTECGRQPVASKE

>gi568815575r:133117045_133318259|GENSCAN_predicted_CDS_8|465_bp
atggataaattcctggacacatataccctcccaagtctaaaagaggaagaagttgaatcc
ctgaatagaccaataacaagttctgaaattgaggcagtaattaatagcctaccaaccaaa
aaaagtccaggaccagacggattcacggccaaattctaccagaggaccgaaatggcagtg
gaagtccactggcaagttaggtctaagtccttaatggaaaagctaggaggccagagcaga
atagagtggcctaagacatctgggatctctggaatgactctggcagtaggggtgagggtg
gggcacctagaagcaatgtttgaagatgtggcaaagatatgtgcatgtgactggccagaa
ttcaaagaccacactttgtcccacctccctgcccttactcttacaatccaaaccagccag
tgctttactgagtgtggaaggcaacctgtagcatccaaggaatag

>gi568815575r:133117045_133318259|GENSCAN_predicted_peptide_9|407_aa
XHLPPPVLFAPLQKERGTCREVLTICDFKGMNFQLSSKSGYPEKAIPPGALLISDIQSNT
PEQVKCIAGLPCIPASLPCGGICLQKSVLAELVGTYTEECTNPLILTPKEEDAMLMVAER
LEGPFNIESVMDPIDVKISDAIMNMQDNSVQVSQKVFQGCGPPKPLPAGRISRSISESAF
SARFRPHHPEERPTTAAGTSLDRLVTDVKEKLKQAKKFWSSLPSNVCNDERMAAGNGNED
DCWNGKGKSRYLFAVTGNGLANQGNNPEVQVDTSKPDILILRQIMALRVMTSKMKNAYNG
NDVDFFDISKHLWFESTNCSCMSSDENKWNEISIPFFFKLGDESSGEGSGSGCEYQQCPS
EFDYNATDHAGKSANEKADSAGVRPGAQAYLLTVFCILFLVMQREWR

>gi568815575r:133117045_133318259|GENSCAN_predicted_CDS_9|1224_bp
ngccacctcccccctccagtcctgtttgctcctttacaaaaggagagggggacatgtagg
gaagtcttaacaatctgtgactttaaaggaatgaactttcagctgtccagcaaatctggc
tatccagaaaaggccattcctccaggggcactgctgataagtgatatccaaagtaacact
ccagagcaggtgaagtgcattgccgggctgccctgcatcccagcatctcttccctgtggt
ggtatctgcctccaaaagtctgtgttagcagaactggtgggtacttacacagaagaatgc
actaatcctctgatactgactccaaaagaggaggatgctatgctgatggtggcagagagg
ctagagggtcctttcaacattgaatcggtcatggatcccatcgatgtgaagatttctgat
gctattatgaacatgcaggataatagtgttcaagtgtctcagaaggttttccagggatgt
ggaccccccaagcccctcccagctggacgaatttctcgttccatctctgaaagtgccttc
agtgctcgcttcagaccacatcaccccgaggaacgcccaaccacagcagctggcactagt
ttggaccgactggttactgatgtcaaggagaaactgaaacaggccaagaaattctggtcc
tcccttccgagcaacgtttgcaacgatgagaggatggctgcaggaaacggcaatgaggat
gactgttggaatgggaaaggcaaaagcaggtacctgtttgcagtgacaggaaatggatta
gccaaccagggcaacaacccagaggtccaggttgacaccagcaaaccagacatactgatc
cttcgtcaaatcatggctcttcgagtgatgaccagcaagatgaagaatgcatacaatggg
aacgacgtggacttctttgatatcagtaagcatttgtggtttgaaagtacgaattgctct
tgtatgtcttctgatgagaacaagtggaatgaaatttctattccatttttttttaaacta
ggtgatgaaagtagtggagaaggaagtggaagtggctgtgagtatcagcagtgcccttca
gagtttgactacaatgccactgaccatgctgggaagagtgccaatgagaaagccgacagt
gctggtgtccgtcctggggcacaggcctacctcctcactgtcttctgcatcttgttcctg
gttatgcagagagagtggagataa