GENSCAN 1.0	Date run:  4-Nov-116	Time: 17:32:48

Sequence gi568815593r:157038733_157239431 : 200699 bp : 42.21% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   5572   5997  426  0  0   19   42   198 0.416   1.36
 1.02 Term +   7025   7180  156  1  0   59   35   150 0.638   3.75
 1.03 PlyA +  10475  10480    6                               1.05

 2.05 PlyA -  10794  10789    6                               1.05
 2.04 Term -  13917  13634  284  1  2   10   46   566 0.959  39.20
 2.03 Intr -  16801  16469  333  2  0  130  113   122 0.989  13.52
 2.02 Intr -  19223  19166   58  2  1  101  111     2 0.550   1.34
 2.01 Init -  21677  21567  111  2  0   58   61    93 0.455   3.86
 2.00 Prom -  45732  45693   40                              -3.65

 3.08 PlyA -  46105  46100    6                              -0.45
 3.07 Term -  48530  48370  161  0  2  102   36   228 0.969  16.12
 3.06 Intr -  56727  56520  208  0  1   88   -6   161 0.000   4.43
 3.05 Intr -  60169  60126   44  2  2  102   98    -9 0.242  -1.46
 3.04 Intr -  68230  67895  336  2  0   97  109   373 0.752  34.87
 3.03 Intr -  94665  94621   45  1  0   63   87    73 0.036   2.16
 3.02 Intr -  99057  98974   84  1  0   98   56    92 0.103   5.87
 3.01 Init - 100699 100075  625  1  1   81   40   511 0.521  41.15
 3.00 Prom - 104390 104351   40                              -5.15

 4.04 PlyA - 104984 104979    6                               1.05
 4.03 Term - 114094 113982  113  2  2   36   48   144 0.827   2.94
 4.02 Intr - 118658 118610   49  2  1   70  115     8 0.052  -0.97
 4.01 Init - 119894 119811   84  2  0   64   73    85 0.615   5.47
 4.00 Prom - 120824 120785   40                              -7.45

 5.03 PlyA - 121683 121678    6                               1.05
 5.02 Term - 124926 123715 1212  0  0   70   43   995 0.988  83.85
 5.01 Init - 127364 126726  639  2  0   75    6   445 0.379  30.38
 5.00 Prom - 127788 127749   40                              -4.95

 6.00 Prom + 151298 151337   40                              -2.15
 6.01 Init + 152000 152221  222  1  0   61   37   139 0.174   4.70
 6.02 Intr + 170157 170261  105  2  0  107  111   119 0.999  15.59
 6.03 Intr + 172555 172636   82  0  1  112   86    80 0.998   8.49
 6.04 Intr + 175459 175587  129  2  0   63   95    70 0.967   4.95
 6.05 Intr + 179135 179175   41  0  2  123   96    60 0.944   7.32
 6.06 Intr + 184131 184282  152  2  2   92  106   179 0.994  18.14
 6.07 Intr + 193608 193662   55  0  1  132   98    60 0.966   9.46
 6.08 Term + 199377 199505  129  2  0   96   45   132 0.409   6.90
 6.09 PlyA + 200175 200180    6                              -1.75


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Intr -  56727  56574  154  0  1   88  101   221 0.999  22.12
S.002 Init -  70251  70194   58  0  1   35  108    77 0.976   4.10
S.003 Sngl - 103990 103727  264  1  0   91   38   177 0.839   8.12
S.004 Init - 163457 163333  125  2  2   93   99   119 0.998  13.19


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815593r:157038733_157239431|GENSCAN_predicted_peptide_1|193_aa
PGQQSETEKEGRKGKGREKERTKEGRKEGRKEGRKEGRKEKERKKERKKERKKERKEGRK
EGRKEGRKEEGRKERKERRKEEGRKERERKTKKEGKKERKKERKRKKERKKERKKERKKE
RKKERREGGRKEGRRKESQKQYATEGQPRHSKNLAQEPWIHGQNGSSHTNPGDTAAPLSV
PPGKLYFDQVSLT

>gi568815593r:157038733_157239431|GENSCAN_predicted_CDS_1|582_bp
cctgggcaacagagtgagactgagaaagaaggaaggaaagggaagggaagggagaaagaa
aggacgaaggaaggaaggaaggaaggaaggaaggaaggaaggaaggaaggaaggaaggag
aaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaaggaaggaaggaag
gaaggaaggaaggaaggaaggaaggaggaaggaaggaaagaaagaaaggaaagaagaaag
gaggaaggaaggaaggagagagaaagaaagacaaagaaagaaggaaagaaagaaagaaag
aaagaaagaaagagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaa
agaaagaaagaaaggagggagggaggaaggaaggaaggaaggagaaaagaaagccaaaag
caatatgcaactgagggccaacccaggcacagtaagaacttggcccaagagccttggatc
cacggccaaaatggcagcagccacacaaatcctggggatacagctgctccactgtctgtt
ccacctggaaaactctactttgaccaggtttcactgacatag

>gi568815593r:157038733_157239431|GENSCAN_predicted_peptide_2|261_aa
MENTATEKALGLRQVGKKALVAGAESAGERVVEEIYGADPIMHPQVVILSLILHLADSVA
GSVKVGGEAGPSVTLPCHYSGAVTSMCWNRGSCSLFTCQNGIVWTNGTHVTYRKDTRYKL
LGDLSRRDVSLTIENTAVSDSGVYCCRVEHRGWFNDMKITVSLEIVPRHDYSNCHNCSNR
HDCSNEHHCSNDNDCSNDDCSNDNCSNNNEHSNDNDCSDDNDCFNDNERSNDNEHSNNNK
CSSDNNCLYLCSSNAFAQAEP

>gi568815593r:157038733_157239431|GENSCAN_predicted_CDS_2|786_bp
atggagaacacagccacggaaaaggccttagggttgaggcaagttggaaagaaagctcta
gtagctggggctgagtcagcaggggagagagtggtagaagaaatctatggggctgatccc
ataatgcatcctcaagtggtcatcttaagcctcatcctacatctggcagattctgtagct
ggttctgtaaaggttggtggagaggcaggtccatctgtcacactaccctgccactacagt
ggagctgtcacatccatgtgctggaatagaggctcatgttctctattcacatgccaaaat
ggcattgtctggaccaatggaacccacgtcacctatcggaaggacacacgctataagcta
ttgggggacctttcaagaagggatgtctctttgaccatagaaaatacagctgtgtctgac
agtggcgtatattgttgccgtgttgagcaccgtgggtggttcaatgacatgaaaatcacc
gtatcattggagattgtgccacgtcacgactactccaattgtcacaactgttccaaccgt
cacgactgttcgaacgagcaccactgttccaacgacaacgactgttccaatgacgactgt
tccaacgacaactgttccaacaacaatgagcattccaacgacaacgactgttctgacgac
aatgactgtttcaacgacaacgagcgttccaacgacaacgagcattccaacaacaacaag
tgttccagtgacaacaactgtctctacctttgttcctccaatgcctttgcccaggcagaa
ccatga

>gi568815593r:157038733_157239431|GENSCAN_predicted_peptide_3|500_aa
MGEPQQVSALPPPPMQYIKEYTDENIQEGLAPKPPPPIKDSYMMFGNQFQCDDLIIRPLE
SQGIERLHPMQFDHKKELRKLNMSILINFLDLLDILIRSPGSIKREEKLEDLKLLFVHVH
HLINEYRPHQARETLRVMMEVQKRQRLETAERFQKHLERVIEMIQNCLASLPDDLPHSEA
GMRVKTEPMDADDSNNCTGQNEHQRENSAAGWTVVSRISLEATEDGKDCQSGSLNDQQSC
EEPSKSDGIYGWSSEVEYRAEVGQNAYLPCFYTPAAPGNLVPVCWGKGACPVFECGNVVL
RTDERDVNYWTSRYWLNGDFRKGDVSLTIENVTLADSGIYCCRIQIPGIMNDEKFNLKLV
IKPAETQTLGSLPDINLTQISTLANELRDSRLANDLRDSGATIRIGIYIGAGICAGLALA
LIFGALIFKCKCFCFSLPLITNSSVRTRLANAVAEGIRSEENIYTIEENVYEVEEPNEYY
CYVSSRQQPSQPLGCRFAMP

>gi568815593r:157038733_157239431|GENSCAN_predicted_CDS_3|1503_bp
atgggtgaaccacagcaagtgagtgcacttccaccacctccaatgcaatatatcaaggaa
tatacggatgaaaatattcaagaaggcttagctcccaagcctccccctccaataaaagac
agttacatgatgtttggcaatcagttccaatgtgatgatcttatcatccgccctttggaa
agtcagggcatcgaacggcttcatcctatgcagtttgatcacaagaaagaactgagaaaa
cttaatatgtctatccttattaatttcttggaccttttagatattttaataaggagccct
gggagtataaaacgagaagagaaactagaagatcttaagctgctttttgtacacgtgcat
catcttataaatgaataccgaccccaccaagcaagagagaccttgagagtcatgatggag
gtccagaaacgtcaacggcttgaaacagctgagagatttcaaaagcacctggaacgagta
attgaaatgattcagaattgcttggcttctttgcctgatgatttgcctcattcagaagca
ggaatgagagtaaaaactgaaccaatggatgctgatgatagcaacaattgtactggacag
aatgaacatcaaagagaaaattcagctgctggttggacggtcgtatccaggataagtttg
gaagccaccgaagatggcaaagattgtcagtctggttctttgaatgaccaacaatcctgt
gaagaaccttctaaatctgatggtatttatggctggtcctcagaagtggaatacagagcg
gaggtcggtcagaatgcctatctgccctgcttctacaccccagccgccccagggaacctc
gtgcccgtctgctggggcaaaggagcctgtcctgtgtttgaatgtggcaacgtggtgctc
aggactgatgaaagggatgtgaattattggacatccagatactggctaaatggggatttc
cgcaaaggagatgtgtccctgaccatagagaatgtgactctagcagacagtgggatctac
tgctgccggatccaaatcccaggcataatgaatgatgaaaaatttaacctgaagttggtc
atcaaaccagcagagacacagacactggggagcctccctgatataaatctaacacaaata
tccacattggccaatgagttacgggactctagattggccaatgacttacgggactctgga
gcaaccatcagaataggcatctacatcggagcagggatctgtgctgggctggctctggct
cttatcttcggcgctttaattttcaaatgtaagtgtttttgtttctctctccctctgata
acaaattcttcagtgagaaccagattggcaaatgcagtagcagagggaattcgctcagaa
gaaaacatctataccattgaagagaacgtatatgaagtggaggagcccaatgagtattat
tgctatgtcagcagcaggcagcaaccctcacaacctttgggttgtcgctttgcaatgcca
tag

>gi568815593r:157038733_157239431|GENSCAN_predicted_peptide_4|81_aa
MHYQDPPSMKDLCPQLLRMLPADKFQLAWCPYGELELPPLPSSHVYNTKSEDQCELWTSG
TNDASMSAHQNQMNHSGAGCR

>gi568815593r:157038733_157239431|GENSCAN_predicted_CDS_4|246_bp
atgcactatcaagaccctccttcaatgaaggacttgtgtcctcagttgctgagaatgctg
ccggcagacaagtttcagctggcatggtgtccatatggggagttggaactcccacccttg
cccagtagtcatgtgtataacaccaagagtgaagaccagtgtgaactatggacttcaggt
actaatgatgcgtcaatgtcagctcatcaaaatcaaatgaaccactctggtgcaggatgt
cgatga

>gi568815593r:157038733_157239431|GENSCAN_predicted_peptide_5|616_aa
MGDLQRQLYNRGEYNIFKYAPMFESNFIQINKKGEVIDVHNRVRMVTVGIVCTSPILPLP
DVMVLAQPTKICEQHVRWGRFAKGRGRRPVKTLELTRLLPLKFVKISIHDHEKQQLRLKL
ATGRTFYLQLCPSSDTREDLFCYWEKLVYLLRPPVESYCSTPTLLSGDAPPEDNKSLVVS
LSKAREHGAGSLGEQFKASPTKPLVPSEAHLEKAAELHREGDQSETGLYKPCDVSAATSS
AYAGGEGIQHASHGTASAASPSTSTPGAAEGGAARTAGGMAVAGTATGPRTDVAIAGAAM
SPATGAMSIATTKSAGPGQVTTALAGAAIKNPGENESSKSMAGAANISSEGISLALVGAA
STSLEGTSTSMAGAASLSQDSSLSAAFAGSITTSKCAAERTEGPAVGPLISTLQSEGYMS
ERDGSQKVSQPSAEVWNENKERREKKDRHPSRKSSHHRKAGESHRRRAGDKNQKASSHRS
ASGHKNTRDDKKEKGYSNVRGKRHGSSRKSSTHSSTKKESRTTQELGKNQSASSTGALQK
KASKISSFLRSLRATPGSKTRVTSHDREVDIVAKMVEKQNIEAKVEKAQGGQELEMISGT
MTSEKTEMIVFETKSI

>gi568815593r:157038733_157239431|GENSCAN_predicted_CDS_5|1851_bp
atgggggacctgcaacgacaattgtacaacagaggagagtacaacattttcaagtatgca
ccaatgttcgagagtaattttattcagataaacaaaaagggagaggtgattgatgtacac
aaccgtgtccgaatggtgacagtgggcatcgtctgcaccagccccatcctcccactgcct
gacgtcatggttctggcccaaccaactaaaatctgtgaacagcatgtcagatggggccgg
tttgccaaggggagaggtcgcaggcccgtcaagactctagagctcacgagactgcttccc
ttgaaatttgtgaagatctccatccacgatcatgagaaacagcagctgcgcctgaaactc
gccactggccgtactttttatctgcagttgtgtccctcttctgacacacgggaagatctc
ttttgctattgggaaaaacttgtctatctcctgaggccaccagtagagagttactgcagt
accccaacacttctatctggggacgcaccacccgaagacaacaaaagcctagtggtaagc
ctctcaaaggctcgagaacatggggcaggttctttgggggagcagttcaaagccagtcct
acaaagcctttggtgccttctgaggcccacctggaaaaagctgcagagctccacagagaa
ggggatcagagtgagactgggctctacaagccttgtgatgtatctgcagccacctcttct
gcttatgctgggggagagggaatccaacatgcctcccacggaacggctagtgcggcttct
ccatccacgagcactccaggggctgctgaaggaggagcagcaaggacagcaggtggcatg
gcagtggcaggaacagcaacaggacctagaacagatgtggcaatagcaggggcagcaatg
agtcctgcaacaggtgctatgagcatagcaacaaccaaatctgcaggcccaggtcaagtg
accacagcgctggcgggagcagctatcaaaaatccaggagaaaatgaatccagcaagtcc
atggcaggtgctgccaacatatcctcagagggtattagcttggccttggtgggtgctgca
agcacctccttggaaggtacttccacctcgatggcgggggccgccagtctctcccaagac
agcagcttgagtgcggcgtttgcaggcagtattacgaccagcaagtgtgcagcagaaaga
actgaaggaccagcagtgggacccctcatctccaccttgcaaagcgaaggctacatgagt
gaacgagatggaagccagaaagtttcccagcccagtgctgaagtctggaatgaaaacaag
gaaagaagagaaaagaaggacagacatcccagtaggaaaagttctcatcaccgcaaggca
ggtgaaagtcaccgcaggagagcgggggacaagaatcagaaagcgtcttcccaccggtcc
gcatctggccataaaaacacgagagatgacaaaaaagaaaaagggtacagcaacgtaagg
ggcaagcgacatggctcctctcgcaagagctccacccacagctccaccaaaaaggagtcg
agaacaactcaggaactggggaagaaccaatctgcatctagcacaggagctttacaaaag
aaagccagtaagatcagctcttttttaaggagcctcagggccactcctggttcaaaaaca
agggtcacatcacatgacagagaggtagatatcgtggctaagatggtggagaagcaaaac
atagaggccaaagtggagaaagcccagggtggccaggagctggagatgatcagtggcact
atgacatccgagaagacggagatgatcgtctttgaaaccaaatccatttaa

>gi568815593r:157038733_157239431|GENSCAN_predicted_peptide_6|304_aa
MGKSILGRGNGKYKDPEEGKSLACVRNRDLNMQSSREGHKTRGRSQTLQALVDHGKEFGF
DSNSHEKFPRLKQWKKRTLKGSIELSRIKCVEIVKSDISIPCHYKYPFQVVHDNYLLYVF
APDRESRQRWVLALKEETRNNNSLVPKYHPNFWMDGKWRCCSQLEKLATGCAQYDPTKNA
SKKPLPPTPEDNRRPLWEPEETVVIALYDYQTNDPQELALRRNEEYCLLDSSEIHWWRVQ
DRNGWYNKSISRDKAEKLLLDTGKEGAFMVRDSRTAGTYTVSVFTKAVVRYGANSAQQSG
EKHF

>gi568815593r:157038733_157239431|GENSCAN_predicted_CDS_6|915_bp
atgggaaagagcattctgggcagagggaacggcaagtacaaagaccctgaggaaggaaaa
agcttggcttgcgtgaggaacagagatttgaacatgcagagttcaagagaggggcacaag
acgaggggcagaagccaaactctgcaggcccttgtggatcatggcaaggagtttggattt
gattccaactcccatgaaaagtttccaaggttgaagcagtggaagaagcgcacgctgaag
gggtccattgagctctcccgaatcaaatgtgttgagattgtgaaaagtgacatcagcatc
ccatgccactataaatacccgtttcaggtggtgcatgacaactacctcctatatgtgttt
gctccagatcgtgagagccggcagcgctgggtgctggcccttaaagaagaaacgaggaat
aataacagtttggtgcctaaatatcatcctaatttctggatggatgggaagtggaggtgc
tgttctcagctggagaagcttgcaacaggctgtgcccaatatgatccaaccaagaatgct
tcaaagaagcctcttcctcctactcctgaagacaacaggcgaccactttgggaacctgaa
gaaactgtggtcattgccttatatgactaccaaaccaatgatcctcaggaactcgcactg
cggcgcaacgaagagtactgcctgctggacagttctgagattcactggtggagagtccag
gacaggaatgggtggtacaataagagtatcagccgagacaaagctgaaaaacttcttttg
gacacaggcaaagaaggagccttcatggtaagggattccaggactgcaggaacatacacc
gtgtctgttttcaccaaggctgttgtaaggtatggagctaactctgctcagcaaagtgga
gagaaacacttctga