FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 Query: pF1KB9573, 375 aa 1>>>pF1KB9573 375 - 375 aa - 375 aa Library: human.CCDS.faa 18511270 residues in 32554 sequences Statistics: Expectation_n fit: rho(ln(x))= 8.8289+/-0.000966; mu= 4.7689+/- 0.059 mean_var=284.0179+/-56.128, 0's: 0 Z-trim(114.9): 14 B-trim: 383 in 1/53 Lambda= 0.076103 statistics sampled from 15402 (15411) to 15402 sequences Algorithm: FASTA (3.7 Nov 2010) [optimized] Parameters: BL50 matrix (15:-5), open/ext: -10/-2 ktup: 2, E-join: 1 (0.76), E-opt: 0.2 (0.473), width: 16 Scan time: 3.080 The best scores are: opt bits E(32554) CCDS34344.1 DEK gene_id:7913|Hs108|chr6 ( 375) 2379 273.9 1.6e-73 CCDS47382.1 DEK gene_id:7913|Hs108|chr6 ( 341) 1865 217.5 1.4e-56 >>CCDS34344.1 DEK gene_id:7913|Hs108|chr6 (375 aa) initn: 2379 init1: 2379 opt: 2379 Z-score: 1433.6 bits: 273.9 E(32554): 1.6e-73 Smith-Waterman score: 2379; 99.5% identity (100.0% similar) in 375 aa overlap (1-375:1-375) 10 20 30 40 50 60 pF1KB9 MSASAPAAEGEGTPTQPASEKEPEMPGPREESEEEEDEDDEEEEEEEKEKSLIVEGKREK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 MSASAPAAEGEGTPTQPASEKEPEMPGPREESEEEEDEDDEEEEEEEKEKSLIVEGKREK 10 20 30 40 50 60 70 80 90 100 110 120 pF1KB9 KKVERLTMQVSSLQREPFTIAQGKGQKLCEIERIHFFLSKKKTDELRNLHKLLYNRPGTV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 KKVERLTMQVSSLQREPFTIAQGKGQKLCEIERIHFFLSKKKTDELRNLHKLLYNRPGTV 70 80 90 100 110 120 130 140 150 160 170 180 pF1KB9 SSLKKNVGQFSGFPFEKGSAQYKKKEEMLKKFRNAMLKSICEVLDLERSGVNSELVKRIL :::::::::::::::::::.:::::::::::::::::::::::::::::::::::::::: CCDS34 SSLKKNVGQFSGFPFEKGSVQYKKKEEMLKKFRNAMLKSICEVLDLERSGVNSELVKRIL 130 140 150 160 170 180 190 200 210 220 230 240 pF1KB9 NFLMHPKPSGKPLPKSKKTCSKGSKKERNSSGMARKAKRTKCPEILSDESSSDEDEKKNK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 NFLMHPKPSGKPLPKSKKTCSKGSKKERNSSGMARKAKRTKCPEILSDESSSDEDEKKNK 190 200 210 220 230 240 250 260 270 280 290 300 pF1KB9 EESSEDEDKESEEEPPKKTAKREKPKQKATSKSKKSVKSANVKKADSSTTKKNQNSSKKE ::::.::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 EESSDDEDKESEEEPPKKTAKREKPKQKATSKSKKSVKSANVKKADSSTTKKNQNSSKKE 250 260 270 280 290 300 310 320 330 340 350 360 pF1KB9 SESEDSSDDEPLIKKLKKPPTDEELKETIKKLLASANLEEVTMKQICKKVYENYPTYDLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS34 SESEDSSDDEPLIKKLKKPPTDEELKETIKKLLASANLEEVTMKQICKKVYENYPTYDLT 310 320 330 340 350 360 370 pF1KB9 ERKDFIKTTVKELIS ::::::::::::::: CCDS34 ERKDFIKTTVKELIS 370 >>CCDS47382.1 DEK gene_id:7913|Hs108|chr6 (341 aa) initn: 1859 init1: 1859 opt: 1865 Z-score: 1129.1 bits: 217.5 E(32554): 1.4e-56 Smith-Waterman score: 2096; 90.4% identity (90.9% similar) in 375 aa overlap (1-375:1-341) 10 20 30 40 50 60 pF1KB9 MSASAPAAEGEGTPTQPASEKEPEMPGPREESEEEEDEDDEEEEEEEKEKSLIVEGKREK :::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 MSASAPAAEGEGTPTQPASEKEPEMPGPREESEEEEDEDDEEEEEEEK------------ 10 20 30 40 70 80 90 100 110 120 pF1KB9 KKVERLTMQVSSLQREPFTIAQGKGQKLCEIERIHFFLSKKKTDELRNLHKLLYNRPGTV :::::::::::::::::::::::::::::::::::::: CCDS47 ----------------------GKGQKLCEIERIHFFLSKKKTDELRNLHKLLYNRPGTV 50 60 70 80 130 140 150 160 170 180 pF1KB9 SSLKKNVGQFSGFPFEKGSAQYKKKEEMLKKFRNAMLKSICEVLDLERSGVNSELVKRIL :::::::::::::::::::.:::::::::::::::::::::::::::::::::::::::: CCDS47 SSLKKNVGQFSGFPFEKGSVQYKKKEEMLKKFRNAMLKSICEVLDLERSGVNSELVKRIL 90 100 110 120 130 140 190 200 210 220 230 240 pF1KB9 NFLMHPKPSGKPLPKSKKTCSKGSKKERNSSGMARKAKRTKCPEILSDESSSDEDEKKNK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 NFLMHPKPSGKPLPKSKKTCSKGSKKERNSSGMARKAKRTKCPEILSDESSSDEDEKKNK 150 160 170 180 190 200 250 260 270 280 290 300 pF1KB9 EESSEDEDKESEEEPPKKTAKREKPKQKATSKSKKSVKSANVKKADSSTTKKNQNSSKKE ::::.::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 EESSDDEDKESEEEPPKKTAKREKPKQKATSKSKKSVKSANVKKADSSTTKKNQNSSKKE 210 220 230 240 250 260 310 320 330 340 350 360 pF1KB9 SESEDSSDDEPLIKKLKKPPTDEELKETIKKLLASANLEEVTMKQICKKVYENYPTYDLT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: CCDS47 SESEDSSDDEPLIKKLKKPPTDEELKETIKKLLASANLEEVTMKQICKKVYENYPTYDLT 270 280 290 300 310 320 370 pF1KB9 ERKDFIKTTVKELIS ::::::::::::::: CCDS47 ERKDFIKTTVKELIS 330 340 375 residues in 1 query sequences 18511270 residues in 32554 library sequences Tcomplib [36.3.4 Apr, 2011] (8 proc) start: Fri Nov 4 17:25:40 2016 done: Fri Nov 4 17:25:41 2016 Total Scan time: 3.080 Total Display time: -0.010 Function used was FASTA [36.3.4 Apr, 2011]