GENSCAN 1.0	Date run:  4-Nov-116	Time: 17:21:32

Sequence gi568815575f:24072743_24311373 : 238631 bp : 42.18% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +    349    521  173  0  2  100  115   108 0.884  12.52
 1.02 Term +   3980   4043   64  2  1   77   49    60 0.647  -2.62
 1.03 PlyA +   4704   4709    6                               1.05

 2.00 Prom +  45914  45953   40                              -3.25
 2.01 Init +  60541  60707  167  0  2   80   25   200 0.957  12.06
 2.02 Intr +  60767  60972  206  2  2   97   75    78 0.969   5.32
 2.03 Intr +  67627  67796  170  2  2   51  105    78 0.707   4.54
 2.04 Term +  67828  67902   75  0  0   71   48    76 0.674  -1.24
 2.05 PlyA +  68296  68301    6                               1.05

 3.00 Prom +  70922  70961   40                              -7.55
 3.01 Init +  76559  76795  237  1  0   86    2   228 0.800  10.06
 3.02 Term +  77799  77981  183  2  0   87   41   121 0.877   3.86
 3.03 PlyA +  78058  78063    6                               1.05

 4.00 Prom +  82971  83010   40                              -2.85
 4.01 Init + 100001 100058   58  1  1   78   75    56 0.450   4.82
 4.02 Intr + 106441 107028  588  2  0   58   95   825 0.435  71.87
 4.03 Intr + 134584 134733  150  2  0   99   82   224 0.995  22.11
 4.04 Intr + 134970 135113  144  1  0   63   97   186 0.999  16.33
 4.05 Intr + 135452 135628  177  0  0   41  115   323 0.731  29.27
 4.06 Intr + 136158 136298  141  1  0   39   94   167 0.998  11.80
 4.07 Term + 137451 138634 1184  1  2  105   42   976 0.999  85.63
 4.08 PlyA + 138831 138836    6                               1.05

 5.00 Prom + 158529 158568   40                              -3.95
 5.01 Init + 170178 170308  131  2  2   59   94    62 0.024   3.57
 5.02 Intr + 186023 186161  139  2  1    0   56   176 0.005   5.15
 5.03 Term + 191054 191254  201  1  0  115   38    77 0.100   1.81
 5.04 PlyA + 193435 193440    6                               1.05

 6.00 Prom + 198914 198953   40                              -5.95
 6.01 Init + 205439 205642  204  1  0   86  100   113 0.974  11.20
 6.02 Term + 206540 206638   99  1  0  111   43    57 0.851   0.65
 6.03 PlyA + 207943 207948    6                               1.05

 7.08 PlyA - 209157 209152    6                               1.05
 7.07 Term - 211220 211090  131  0  2   57   33    94 0.534  -1.84
 7.06 Intr - 214117 213927  191  0  2   89   91    97 0.287   8.41
 7.05 Intr - 219832 219710  123  0  0   60   61    82 0.118   1.48
 7.04 Intr - 222703 222590  114  0  0   72   87    37 0.112   0.64
 7.03 Intr - 237612 237451  162  2  0   76   97    53 0.213   3.17
 7.02 Intr - 238365 238188  178  1  1   85   69   211 0.212  16.96
 7.01 Intr - 238551 238425  127  0  1   49   72   105 0.277   4.33

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init -  80865  80793   73  0  1   71   94    68 0.825   6.98


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815575f:24072743_24311373|GENSCAN_predicted_peptide_1|78_aa
VQKLSKNEVLMVNIGSLSTGGRVSAVKADLGKIVLTNPVCTEVGEKIALSRRVEKHWRLI
GWGQIRRGVTIKPTVDDD

>gi568815575f:24072743_24311373|GENSCAN_predicted_CDS_1|237_bp
gttcaaaagctgtctaagaatgaagtgctcatggtgaacataggatccctgtcaacagga
gggagagttagtgctgtcaaggccgatttgggtaaaattgttttgaccaatccagtgtgc
acagaggtaggagaaaaaattgcccttagccgaagagttgaaaaacactggcgtttaatt
ggttggggtcagataagaagaggagtgacaatcaagccaacagtagatgatgactga

>gi568815575f:24072743_24311373|GENSCAN_predicted_peptide_2|205_aa
MLLKVNLEALHPWWPVPAGTRGCGHLAPQSAPSHRPQAMAVPDRMYQVTGQALDRRDLDM
GAQHHTLAHWRRLQPASAVPQIHQVPAAPPRPAPSAQAMLHYQEDQHLLLVAGASHPSVP
HINSVICLSVHEQQNLDGAPGVLVTDFGSLTQYALLVAWLQWAAGSLRSPPKQLPTQFRL
EPAPTGFLIASEEQSLKFDNCIQIG

>gi568815575f:24072743_24311373|GENSCAN_predicted_CDS_2|618_bp
atgctccttaaagtgaacttagaggctctacatccctggtggccagtgcctgctgggacc
agaggctgtggccatctggccccccagtcagccccaagtcatcgcccccaggcaatggct
gtgcctgacagaatgtaccaggtcactggacaggcactcgataggagagacctagacatg
ggtgcccagcaccacaccctggcccactggaggagattacagccagcaagtgcagttcca
caaatccatcaagttcctgctgctccaccgcgtcctgcaccatcagcacaagccatgctt
cactaccaagaggaccaacaccttctgctagttgcaggggcctctcaccccagtgtgccc
catataaactcggtgatttgtctttctgtgcacgagcagcagaacctagatggagcccct
ggtgttttagtaacagattttggttccctgacccagtatgctttgcttgtggcttggctg
cagtgggctgctgggagtctcagaagccctcctaagcagctgcccacccaatttaggctg
gagccagccccaacagggttcctgattgcctcggaagaacagtctttgaaatttgacaac
tgcatccagataggatga

>gi568815575f:24072743_24311373|GENSCAN_predicted_peptide_3|139_aa
MVGGGRAACLSAGSADRGPARALRPRRRRQRRVCGGGGRERGGGGKKGGAVTETPAAGDP
AAARPLGSPVAGRERRRHGLSCRRRPPPPPGRRDRFTLSAPGPAPSPAPVATRGQSGQVA
FRTPGLTRAYGTPGNVIFA

>gi568815575f:24072743_24311373|GENSCAN_predicted_CDS_3|420_bp
atggtggggggcggccgggccgcctgcctctccgcggggtcggccgaccgcggccccgcg
cgggctttacggccgaggcggcggcggcagcggcgcgtgtgtggcggcggcgggcgggag
cgcggaggaggtggaaagaaggggggcgctgtcacggagactccggccgccggagacccc
gccgcagcgaggccactgggctccccggtcgcggggcgggagcggcgccgacacgggctg
agctgccgcaggcggccaccgccgccgcccggacgccgggaccgtttcaccctcagcgcc
cctggccctgcgccttcccccgcgcctgtagccacccgagggcagtcggggcaggtggca
ttccggacacctgggcttaccagggcatacgggaccccaggaaatgttatttttgcttaa

>gi568815575f:24072743_24311373|GENSCAN_predicted_peptide_4|813_aa
MDEDGLELQQEPNSFFDATGADGTHMDGDQIVVEVQETVFVSDVVDSDITVHNFVPDDPD
SVVIQDVIEDVVIEDVQCPDIMEEADVSETVIIPEQVLDSDVTEEVSLAHCTVPDDVLAS
DITSASMSMPEHVLTGDSIHVSDVGHVGHVGHVEHVVHDSVVEAEIVTDPLTTDVVSEEV
LVADCASEAVIDANGIPVDQQDDDKGNCEDYLMISLDDAGKIEHDGSSGMTMDTESEIDP
CKVDGTCPEVIKVYIFKADPGEDDLGGTVDIVESEPENDHGVELLDQNSSIRVPREKMVY
MTVNDSQPEDEDLKVFVTFYLDVAEIADEVYMEVIVGEEDAAAAAAAAAVHEQQMDDNEI
KTFMPIAWAAAYGNNSDGIENRNGTASALLHIDESAGLGRLAKQKPKKRRRPDSRQYQTA
IIIGPDGHPLTVYPCMICGKKFKSRGFLKRHMKNHPEHLAKKKYRCTDCDYTTNKKISLH
NHLESHKLTSKAEKAIECDECGKHFSHAGALFTHKMVHKEKGANKMHKCKFCEYETAEQG
LLNRHLLAVHSKNFPHICVECGKGFRHPSELKKHMRIHTGEKPYQCQYCEYRSADSSNLK
THVKTKHSKEMPFKCDICLLTFSDTKEVQQHALIHQESKTHQCLHCDHKSSNSSDLKRHI
ISVHTKDYPHKCDMCDKGFHRPSELKKHVAAHKGKKMHQCRHCDFKIADPFVLSRHILSV
HTKDLPFRCKRCRKGFRQQSELKKHMKTHSGRKVYQCEYCEYSTTDASGFKRHVISIHTK
DYPHRCEYCKKGFRRPSEKNQHIMRHHKEVGLP

>gi568815575f:24072743_24311373|GENSCAN_predicted_CDS_4|2442_bp
atggatgaagatgggcttgaattacaacaagagccaaactcattttttgatgcaacagga
gctgatggtacacacatggatggtgatcaaattgttgtggaagtacaagaaactgttttt
gtttcagatgttgtggattcagacataactgtgcataactttgttcctgatgacccagat
tcagttgtaatccaagatgttattgaggacgttgttatagaagatgttcagtgcccagat
atcatggaagaagcagatgtgtctgaaacggtcatcattcctgagcaagtgctggactca
gatgtaactgaagaagtttctttagcacattgcacagtcccagatgatgttttagcttct
gacattacttcagcctcaatgtctatgccagaacacgtcttgacgggtgattctatacat
gtgtctgacgttggacatgttggacatgttggacatgttgaacatgtggttcatgatagt
gtagtggaagcagaaattgtcactgatcctctgactaccgacgtagtttcagaagaagta
ttggtagcagactgtgcctctgaagcagtcatagatgccaatgggatccctgtggaccag
caggatgatgacaaaggcaactgtgaggactaccttatgatttccttggatgatgctggc
aaaatagaacacgatggttcttctggaatgaccatggacacagagtcggaaattgatcct
tgtaaagtggatggcacttgccctgaggtcatcaaggtgtacatttttaaagctgaccct
ggagaagatgacttaggtggaactgtagacattgtggagagtgagcctgagaatgatcat
ggagttgaactgcttgatcagaacagcagtattcgtgttcccagggaaaagatggtttat
atgactgtcaatgactctcagccagaagatgaagatttaaaagtttttgtaactttctac
ttagatgttgctgaaatcgctgacgaagtttatatggaagtgatcgtaggagaggaggat
gctgcagcagcagcggcagccgccgccgtgcacgagcagcaaatggatgacaatgaaatc
aaaaccttcatgccgattgcatgggcagcagcttatggtaataattctgatggaattgaa
aaccggaatggcactgcaagtgccctcttgcacatagatgagtctgctggcctcggcaga
ctggctaaacaaaaaccaaagaaaaggagaagacctgattccaggcagtaccaaacagca
ataattattggccctgatggacatcctttgactgtctatccttgcatgatttgtgggaag
aagtttaagtcgagaggttttttgaaaaggcacatgaaaaaccatcccgaacaccttgcc
aagaagaaataccgctgtactgactgtgattacactaccaacaagaagataagtttacac
aaccacctggagagccacaagctgaccagcaaggcagagaaggccattgaatgcgatgag
tgtgggaagcatttctctcatgcaggggctttgtttactcacaaaatggtgcataaggaa
aaaggagccaacaaaatgcacaagtgtaaattctgtgaatacgagacagctgaacaaggg
ttattgaatcgccacctcttggcagtccacagcaagaactttcctcatatttgtgtggag
tgtggtaagggttttcgtcacccgtcagagctcaaaaagcacatgagaatccatactggg
gagaagccgtaccaatgccagtactgcgaatataggtctgcagactcttctaacttgaaa
acgcatgtcaaaactaagcatagtaaagagatgccattcaagtgtgacatttgtcttctg
actttctcggataccaaagaggtgcagcaacatgctcttatccaccaagaaagcaaaaca
caccagtgtttgcattgcgaccacaagagttcgaactcaagtgatttgaaacgacacata
atttcagttcacacgaaagactacccccataagtgtgacatgtgtgataaaggctttcac
aggccttcagaactcaagaaacacgtggctgcccacaagggcaaaaaaatgcaccagtgt
agacattgtgactttaagattgcagatccatttgttctaagtcgccatattctctcagtt
cacacaaaggatcttccatttaggtgcaagagatgtagaaagggatttaggcaacagagt
gagcttaaaaagcatatgaagacacacagtggcaggaaagtgtatcagtgtgagtactgt
gagtatagcactacagatgcctcaggctttaaacggcacgttatttccattcacacgaaa
gactatcctcaccggtgtgagtactgcaagaaaggcttccgaagaccttcagaaaagaac
cagcacataatgcgacatcataaagaagttggcctgccctaa

>gi568815575f:24072743_24311373|GENSCAN_predicted_peptide_5|156_aa
MQRFTWPGTENSFWPTTSKKLTPSGEPRPLVQQLVRNGIWPTTTLEYCSNRITGCPVKTT
GCGPTACTCDTENWIPEPLDSGCRCHPHQKLPTISLKPKSNSVIPLFNPSAPFSQNNTRV
VLKTCKVPHALHPGLQISIALTLGHCISQGSLEGQN

>gi568815575f:24072743_24311373|GENSCAN_predicted_CDS_5|471_bp
atgcagaggttcacatggccaggaactgagaacagcttctggccaacaaccagcaagaaa
ctgacgccctcaggggaaccaaggcccttagtccaacagcttgtgagaaacggaatctgg
ccaacaaccaccctggagtactgctcaaaccgcatcactggctgtccagtgaagaccact
ggatgtggacccacagcttgcacctgtgatactgagaactggattccagaacctctggat
tctggatgccgttgccaccctcaccagaaactgccaacaatctcgttaaaacctaagtca
aatagtgttattcctttgttcaatccctctgctccattttctcagaataacactcgagtt
gttcttaagacctgcaaggtcccacatgctctgcaccctggacttcaaatctccattgct
ctcacccttggtcactgtattagtcagggttctctagagggacagaactaa

>gi568815575f:24072743_24311373|GENSCAN_predicted_peptide_6|100_aa
MVEGERGAKAPLTWQQLRECAGELPFIKPSDLVRLIHYHENSMGKSHPHDSITSHRVPPV
IHGALQFKGASSTSAVLQELNNQLISLEFPGCKLTIGDKQ

>gi568815575f:24072743_24311373|GENSCAN_predicted_CDS_6|303_bp
atggtggaaggtgaaagaggagcaaaggcacctcttacatggcagcagttgagagagtgt
gcaggggaactgccctttataaaaccatcagatcttgtgagacttattcactatcatgag
aacagcatgggaaaatcccacccccatgattcaattacctctcaccgagtccctcccgta
atacatggggcgctacaattcaagggtgccagttctacatctgctgtcctccaggaatta
aataaccagctcataagcctggaattccctggatgtaaactgactataggggacaaacag
taa

>gi568815575f:24072743_24311373|GENSCAN_predicted_peptide_7|341_aa
QLQQPTAAHPPQPGPQGSTLGLSTQGQAFPAQQLLNVNLTGAGSSAGCPAPLCLGAAATA
AAAAAATTTATADPAPDTAFESPAAASVFGNRRCSDSAATSRSQDHLATLKLMPIEHQLP
ILPHPVPGSHCSTFFLYELTTLAISWKWNHMAFVTCLTPCNIYLTLDYTETSSLWINHSL
TKCMHLESFSSWGCWEHHGLAASRAVLHFLGPSFWPRADKLSLQDINLWDPGPHKEGLYG
FQGSDTMWSLTHPLPTGKLWTDQSSLLPPASGFSPPQGGQMELNELSSREELSALERPVR
IGKHALEIPVPHGNLIMIPGMTQKIQCTELNEKPQRGFTAM

>gi568815575f:24072743_24311373|GENSCAN_predicted_CDS_7|1026_bp
cagctccagcagcccacagctgctcaccctcctcagccagggccacagggttccacacta
ggtttgagcacgcaagggcaggccttccctgctcagcaacttcttaatgtgaacctcact
ggagcaggttcctcagcagggtgtccagctcccctttgtcttggggcagcagccacagcc
gctgctgctgctgcagccacaaccacagccacagcagatccagctccagacacagccttt
gagagtcctgcagcagccagtgtttttggcaacaggcgctgttcagatagtgcagccaca
tccagatctcaagaccatcttgcaacactgaaactcatgcccattgaacaccagctcccc
attctccctcatccagtccctggcagccattgttctactttctttctctatgagttgact
accctggccatttcatggaagtggaatcatatggcatttgtcacttgcctaaccccctgc
aacatctacttaacactggactacaccgaaacatcttccctctggatcaaccattcctta
accaagtgtatgcatttggaatccttctcctcttggggttgttgggaacatcacggccta
gctgccagcagggctgttcttcactttctcggtccttccttttggccaagagcagacaag
ctgagcctgcaggatattaatctgtgggatccaggtccacacaaggagggactatacggg
tttcaaggcagtgacacaatgtggtccctcactcaccctctacccacggggaagttatgg
accgatcaaagttctcttcttcctcctgcaagtggattctcccctcctcagggtggtcag
atggagctgaatgaactttcttctagggaggagctctctgccttggagagaccagtcaga
attgggaagcatgcattagagattcctgtgccccatggaaacttgatcatgattccaggt
atgactcaaaaaatacagtgtacagaactcaatgaaaaaccacagcgtggcttcacagcc
atgtag