GENSCAN 1.0	Date run:  4-Nov-116	Time: 17:04:39

Sequence gi568815592f:113757746_113960576 : 202831 bp : 38.35% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +  41002  41097   96  0  0   78   78    83 0.172   6.66
 1.02 Term +  66115  66255  141  0  0   52   44   144 0.036   3.35
 1.03 PlyA +  66384  66389    6                               1.05

 2.00 Prom +  70222  70261   40                              -4.45
 2.01 Init +  70868  70886   19  1  1   70  101    12 0.129   0.95
 2.02 Intr +  74741  74898  158  0  2   24   66   168 0.331   7.01
 2.03 Intr +  81504  81825  322  2  1   68   60   300 0.105  19.71
 2.04 Intr +  97495  97626  132  2  0   80   52    89 0.174   4.20
 2.05 Term +  97950  98140  191  1  2    8   43   189 0.208   3.03
 2.06 PlyA +  98165  98170    6                               1.05

 3.00 Prom +  99816  99855   40                              -8.95
 3.01 Init + 100001 100102  102  1  0   99   99    82 0.070  10.69
 3.02 Term + 101938 102834  897  0  0  121   42   869 0.999  76.98
 3.03 PlyA + 103594 103599    6                               1.05

 4.00 Prom + 106697 106736   40                              -5.15
 4.01 Init + 120690 120780   91  2  1   77   57    80 0.522   4.50
 4.02 Intr + 127353 127425   73  1  1   61   37   117 0.366   1.45
 4.03 Intr + 127578 127736  159  0  0   77   59    63 0.249   0.48
 4.04 Intr + 138721 138815   95  1  2   67   87    71 0.355   3.59
 4.05 Intr + 141757 141861  105  2  0   62   99    58 0.543   3.57
 4.06 Intr + 146534 146999  466  0  1   83  105   175 0.555   9.96
 4.07 Intr + 148428 148761  334  0  1    6   75   389 0.692  24.05
 4.08 Intr + 149730 149893  164  2  2   88   37     1 0.371  -7.15
 4.09 Term + 149984 150173  190  2  1   73   53   146 0.672   5.54
 4.10 PlyA + 150513 150518    6                               1.05

 5.14 PlyA - 151771 151766    6                               1.05
 5.13 Term - 161861 161489  373  1  1  108   32   186 0.327   8.18
 5.12 Intr - 184020 183963   58  1  1   83   61    82 0.397   2.02
 5.11 Intr - 185761 185606  156  2  0   28   71   275 0.964  18.86
 5.10 Intr - 186665 186535  131  1  2   53   57   215 0.977  14.32
 5.09 Intr - 187725 187617  109  1  1   55   69    50 0.988  -1.78
 5.08 Intr - 188403 188263  141  1  0   75  115   134 0.995  14.20
 5.07 Intr - 191342 191234  109  2  1   46  121    24 0.861   0.44
 5.06 Intr - 191515 191423   93  1  0   45   95   114 0.977   7.04
 5.05 Intr - 195715 195532  184  0  1   78   90   110 0.840   9.07
 5.04 Intr - 198406 198268  139  2  1   73   53   102 0.981   3.80
 5.03 Intr - 198948 198874   75  1  0   65  111    83 0.991   6.87
 5.02 Intr - 201021 200904  118  0  1   94   57   115 0.810   8.12
 5.01 Intr - 202273 202161  113  2  2  103   73    49 0.904   4.08

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815592f:113757746_113960576|GENSCAN_predicted_peptide_1|78_aa
MGLPHPDPYSKNVYVGSLTRHVTVYEDRAFKELSLAEWIMLAIQMASAGLNVTGEETAIE
KHPLNDLGTQKAITLRIK

>gi568815592f:113757746_113960576|GENSCAN_predicted_CDS_1|237_bp
atggggctcccccatcccgatccctactccaaaaatgtttatgttggatccttaacccgt
catgtgactgtatatgaagatagggcctttaaggagctctcacttgctgagtggatcatg
ttagctatacaaatggcttctgcaggactaaatgtgactggcgaggaaacagccattgaa
aagcatcccctgaatgacttgggaacacaaaaagccatcacactcaggataaaatag

>gi568815592f:113757746_113960576|GENSCAN_predicted_peptide_2|273_aa
MDTKKQWHKPQQSLRYPLEILMVNSYLNETGFQNAVDGKPYKIIDVITEEGGYLFQVSLP
SWQLLLTGAIPTKEMKNSLESINYRLQLMKSGKYMLGYKQTLKMIRQGTAKLVILAYNCP
ALRKSEVEYYAMLAKIGVHHYSGNNIELGTACGKYYRVCTLALTDPAPAPPLPPPRPSAP
NLPRPLPGRPADTRQIGVPERKGGKATRQPDAFLRKRLYISSGEYDHGRIMHLKELDSEK
TKLHVTMFSLVIFKATLEQRVTGLNQPSFSLRV

>gi568815592f:113757746_113960576|GENSCAN_predicted_CDS_2|822_bp
atggacacaaagaaacaatggcataaaccacagcagtcattacgatatccactggagatc
ctgatggtgaactcctacctaaatgaaacaggcttccagaatgctgtggatggtaaaccc
tataaaattattgatgttattactgaagaaggtggatacctgtttcaagtctctctacca
tcttggcagctgctcttgactggggccatcccaaccaaggagatgaaaaattcactggag
tcaattaattatcggctccaactcatgaaaagtggaaagtacatgctggggtacaagcag
actttaaagatgatcagacaaggcacagcaaaattggtcatccttgcttacaactgccca
gctttgcggaaatcagaagtagagtactatgcaatgttggccaaaattggtgtccatcac
tacagtggcaataatattgaactgggaacagcatgcggaaaatactacagagtatgcaca
ctggcgctcactgatccagcgccggctccgcctcttccccctccccggcccagtgctccg
aatcttccccggccgttgccagggagaccagccgataccaggcaaataggcgtaccagaa
agaaaaggggggaaagctacacggcagcctgatgcatttctacggaaacgtctttacatc
agctctggggaatatgaccatggtcgaataatgcatctgaaggaactggacagtgagaag
acgaagcttcacgtaacaatgttcagcttggtgatttttaaagcaacgcttgaacaaaga
gttactggcttgaaccaaccgtctttttcactcagagtgtga

>gi568815592f:113757746_113960576|GENSCAN_predicted_peptide_3|332_aa
MGAQFSKTAAKGEAAAERPGEAAVASSPSKANGQENGHVKVNGDASPAAAESGAKEELQA
NGSAPAADKEEPAAAGSGAASPSAAEKGEPAAAAAPEAGASPVEKEAPAEGEAAEPGSPT
AAEGEAASAASSTSSPKAEDGATPSPSNETPKKKKKRFSFKKSFKLSGFSFKKNKKEAGE
GGEAEAPAAEGGKDEAAGGAAAAAAEAGAASGEQAAAPGEEAAAGEEGAAGGDPQEAKPQ
EAAVAPEKPPASDETKAAEEPSKVEEKKAEEAGASAAACEAPSAAGPGAPPEQEAAPAEE
PAAAAASSACAAPSQEAQPECSPEAPPAEAAE

>gi568815592f:113757746_113960576|GENSCAN_predicted_CDS_3|999_bp
atgggtgcccagttctccaagaccgcagcgaagggagaagccgccgcggagaggcctggg
gaggcggctgtggcctcgtcgccttccaaagcgaacggacaggagaatggccacgtgaag
gtaaacggcgacgcttcgcccgcggccgccgagtcgggcgccaaggaggagctgcaggcc
aacggcagcgccccggccgccgacaaggaggagcccgcggccgccgggagcggggcggcg
tcgccctccgcggccgagaaaggtgagccggccgccgccgctgcccccgaggccggggcc
agcccggtagagaaggaggcccccgcggaaggcgaggctgccgagcccggctcgcccacg
gccgcggagggagaggccgcgtcggccgcctcctcgacttcttcgcccaaggccgaggac
ggggccacgccctcgcccagcaacgagaccccgaaaaaaaaaaagaagcgcttttccttc
aagaagtctttcaagctgagcggcttctccttcaagaagaacaagaaggaggctggagaa
ggcggtgaggctgaggcgcccgctgccgaaggcggcaaggacgaggccgccgggggcgca
gctgcggccgccgccgaggcgggcgcggcctccggggagcaggcagcggcgccgggcgag
gaggcggcagcgggcgaggagggggcggcgggtggcgacccgcaggaggccaagccccag
gaggccgctgtcgcgccagagaagccgcccgccagcgacgagaccaaggccgccgaggag
cccagcaaggtggaggagaaaaaggccgaggaggccggggccagcgccgccgcctgcgag
gccccctccgccgccgggcccggcgcgcccccggagcaggaggcagcccccgcggaggag
cccgcggccgccgcagcctcgtcagcctgcgcagccccctcacaggaggcccagcccgag
tgcagtccagaagcccccccagcggaggcggcagagtaa

>gi568815592f:113757746_113960576|GENSCAN_predicted_peptide_4|558_aa
MQSCMETQKKQETMETQQHPYRLRDGNGRGACTEKRATKKKEGREEEEEESERRKYRGLF
SPDVITASKEASDQEQVTLPSQGTAKWTLHTTESIYFEELDLFSSFACVYTVVCQEEALS
KDSGLVWPCLSHEDTTTTPVSSTLVDVPQCPHGALLAGLLLCLPNATGRTQTAIERQKAW
EWVRQEDLCTSISIAFSTTGFLPSSSAKPAIVATWGASDSPKSPRPEDMLSSLVSERGTQ
RLLGKRTRVLKPRVFSPTASALAVACQTSPLIFAFLPASAFVYPRRQDPTVKSERKTSGS
RFSSRCCVSQCHLLSSQRQLDVVTDFLGMRNCDSDVVEMRWICGRGCIHRKMQPQDQGQK
ASHGGPKDSRPHGGPRDSRSHVEDPRTAGLTWRTQGQQVSHGGPRDSRPHVEGPGTAGLT
WRGYGQQASCGGPQPLSRRRQSRMFFPLKMLACEVAMLQRWPPEEPPFLAPMLLCSLLPH
WVWAALGGSDAVGFPRESQPPYKTSNLRPPCTEEAQASHMEGTCGESKIFGQTVEILAIP
AQGSRHVSEETVLDVELG

>gi568815592f:113757746_113960576|GENSCAN_predicted_CDS_4|1677_bp
atgcagtcctgcatggaaacccagaagaaacaggagacaatggaaactcagcagcaccca
tacagactcagagatggtaatgggagaggagcttgcactgagaagagagctaccaaaaag
aaggaaggaagagaggaagaagaggaggaatctgagagaagaaagtacaggggcctgttt
tctccagatgtaataactgcttcaaaggaagcttcagaccaggagcaagtaactttgcca
agtcaaggaactgcaaaatggacactccacactacagaaagcatttattttgaagaatta
gatctattttcttcatttgcctgtgtttatactgtagtctgccaagaagaagctctcagc
aaagatagtggcctggtttggccctgcctgtcacatgaagacacaacaactactccagtt
tcttctactttggtggatgtgcctcagtgcccgcatggtgcactccttgcaggtctccta
ctgtgcctccccaacgccactggaagaacccaaactgccatcgaaaggcagaaagcctgg
gaatgggttcggcaggaagatctctgtacctcaatctccattgctttcagcaccactggc
tttctccccagctcaagtgcaaaacctgccatcgttgctacctggggtgcctcagactca
cccaagtcccccaggccagaggacatgctctcaagccttgtttcagaaagagggacccaa
aggctgttagggaagagaaccagggtcctcaaacccagggttttctcacccactgcctct
gctctggctgtggcctgccagacctctcctctgattttcgctttccttcctgccagtgcc
tttgtttatccgaggcgccaagatcccactgtgaagtctgaaaggaagaccagtggttct
cgcttttcctctagatgctgtgtctcccaatgtcatcttctttcctctcaaagacaattg
gacgttgttacagattttcttggaatgagaaactgtgactcagatgtggtagagatgaga
tggatatgtggccgtggttgcatccaccggaagatgcagccacaggaccagggacagaag
gcctcacatggagggcccaaggacagcaggcctcacggaggacccagggacagcaggtct
cacgtggaggacccaaggacagcaggcctcacgtggaggacccagggacagcaggtctca
catggaggacccagggacagcaggcctcatgtggagggcccagggacagcaggcctcacg
tggaggggctacggacagcaggcctcatgtggagggccccagcccctgtctagaaggagg
cagagcaggatgtttttcccattgaaaatgttagcatgcgaggtagccatgcttcagaga
tggcctcctgaggaaccaccctttctagcacccatgctcctgtgcagtctcctcccacac
tgggtctgggctgcacttggaggaagtgatgctgtgggatttccaagggaaagtcagcca
ccatataagacatctaacctgagaccaccatgcactgaggaagcccaagctagccacatg
gagggaacatgtggagaaagcaagatatttggccaaactgtagagattttggccatccca
gcccaggggtccagacatgtaagtgaagaaaccgtgttggatgttgagcttggttga

>gi568815592f:113757746_113960576|GENSCAN_predicted_peptide_5|599_aa
XDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKYHSDEYIKFL
RSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQQTDMAVNWA
GGLHHAKKSEASGFCYVNDIVLAILELLKTFKGKTKTYGFVFRYHQRVLYIDIDIHHGDG
VEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFK
PIISKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVVKTFNLPLLMLGGGG
YTIRNVARCWTYETAVALDCEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTPEYMEKI
KQRLFENLRMLPHAPGVQMQAIPEDAVHEDSGDEDGEDPDKRISIRASDKRIACDEEFSD
SEDEGEGGRRNVADHKKGAKKARIEEDKKETEDKKTDVKEEDKSKDNSGEKTDTKGGVTG
TSCAYTSAFTLLESGVTFNPQITNTAMQAARELEADDKRHIAILLPDLSGQQKIPSWEHS
KITNKSGGRVQFPLQLKKLQSDEQTRHFLLKPCPHSSVSTFAFPSRESNRVWCKRCMSQ

>gi568815592f:113757746_113960576|GENSCAN_predicted_CDS_5|1800_bp
ngtgatattggaaattattattatggacagggtcatcccatgaagcctcatagaatccgc
atgacccataacttgctgttaaattatggcttatacagaaaaatggaaatatataggccc
cataaagccactgccgaagaaatgacaaaatatcacagtgatgagtatatcaaatttcta
cggtcaataagaccagataacatgtctgagtatagtaagcagatgcagagatttaatgtt
ggagaagattgtccagtgtttgatggactctttgagttttgtcagctctcaactggcggt
tcagttgctggagctgtgaagttaaaccgacaacagactgatatggctgttaattgggct
ggaggattacatcatgctaagaaatcagaagcatcaggattctgttacgttaatgatatt
gtgcttgccatccttgaattactaaaaacctttaaaggaaaaaccaaaacttatggattt
gttttcaggtatcatcagagagtcttatatattgatatagatattcatcatggtgatggt
gttgaagaagctttttatacaacagatcgtgtaatgacggtatcattccataaatatggg
gaatactttcctggcacaggagacttgagggatattggtgctggaaaaggcaaatactat
gctgtcaattttccaatgagagatggtatagatgatgagtcatatgggcagatatttaag
cctattatctcaaaggtgatggagatgtatcaacctagtgctgtggtattacagtgtggt
gcagactcattatctggtgatagactgggttgtttcaatctaacagtcaaaggtcatgct
aaatgtgtagaagttgtaaaaacttttaacttaccattactgatgcttggaggaggtggc
tacacaatccgtaatgttgctcgatgttggacatatgagactgcagttgcccttgattgt
gagattcccaatgagttgccatataatgattactttgagtattttggaccagacttcaaa
ctgcatattagtccttcaaacatgacaaaccagaacactccagaatatatggaaaagata
aaacagcgtttgtttgaaaatttgcgcatgttacctcatgcacctggtgtccagatgcaa
gctattccagaagatgctgttcatgaagacagtggagatgaagatggagaagatccagac
aagagaatttctattcgagcatcagacaagcggatagcttgtgatgaagaattctcagat
tctgaggatgaaggagaaggaggtcgaagaaatgtggctgatcataagaaaggagcaaag
aaagctagaattgaagaagataagaaagaaacagaggacaaaaaaacagacgttaaggaa
gaagataaatccaaggacaacagtggtgaaaaaacagataccaaagggggtgttactggt
actagctgtgcatacacctctgccttcaccctccttgagagtggtgtcaccttcaatcca
cagataacaaacacagcaatgcaggcagccagggaactggaggcagatgacaaaagacac
attgctattctcttacctgatctatcaggtcagcagaaaataccttcttgggagcacagc
aagataaccaacaagtcgggagggagggtgcagtttccgttgcagctgaagaaacttcag
agtgatgaacaaactcgacatttcctactgaagccatgtccacactcatctgtatccaca
tttgcttttccaagtcgtgaatcgaacagagtttggtgtaagcgttgcatgtcccagtaa