GENSCAN 1.0	Date run:  4-Nov-116	Time: 16:54:48

Sequence gi568815574f:18446788_18648468 : 201681 bp : 37.72% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.04 PlyA -   1205   1200    6                               1.05
 1.03 Term -   5978   5866  113  0  2   84   45    56 0.151  -1.36
 1.02 Intr -   9371   9286   86  1  2   75   95    82 0.293   6.14
 1.01 Init -  16080  15839  242  0  2   96   42   110 0.283   4.59
 1.00 Prom -  21639  21600   40                              -4.55

 2.06 PlyA -  23437  23432    6                               1.05
 2.05 Term -  32006  31779  228  2  0   63   49   116 0.115   0.85
 2.04 Intr -  33535  33391  145  0  1  106   37    84 0.194   4.46
 2.03 Intr -  45275  45156  120  1  0  103  101    18 0.218   3.29
 2.02 Intr -  70715  70587  129  1  0   40   67   133 0.011   5.29
 2.01 Init -  80983  80823  161  1  2   62   79   167 0.056  10.63
 2.00 Prom -  93088  93049   40                              -3.65

 3.00 Prom +  95113  95152   40                              -5.15
 3.01 Init + 100001 100513  513  1  0   50   63   264 0.986  15.05
 3.02 Term + 100992 101684  693  2  0   88   39   363 0.975  23.98
 3.03 PlyA + 101782 101787    6                               1.05

 4.04 PlyA - 101824 101819    6                               1.05
 4.03 Term - 106912 106832   81  1  0   67   36   135 0.153   2.91
 4.02 Intr - 110260 110094  167  2  2   31   95    79 0.045   1.66
 4.01 Init - 112394 112262  133  2  1   67  101    89 0.281   8.45
 4.00 Prom - 116480 116441   40                              -5.95

 5.02 PlyA - 117395 117390    6                               1.05
 5.01 Sngl - 124181 123801  381  2  0   85   38   212 0.926  11.82
 5.00 Prom - 125591 125552   40                             -10.75

 6.04 PlyA - 125885 125880    6                               1.05
 6.03 Term - 126679 125953  727  0  1  -39   45   367 0.896  11.66
 6.02 Intr - 127134 126935  200  0  2   57   69   110 0.877   3.23
 6.01 Init - 128475 128266  210  0  0   82   49   242 0.899  18.53
 6.00 Prom - 134599 134560   40                              -4.95

 7.08 PlyA - 135281 135276    6                              -0.45
 7.07 Term - 137749 137274  476  2  2  109   43   194 0.836  11.06
 7.06 Intr - 137949 137919   31  0  1   27   80    40 0.335  -6.11
 7.05 Intr - 140813 140625  189  2  0   42  108   186 0.396  14.86
 7.04 Intr - 147962 147812  151  1  1   64   36    86 0.329   0.24
 7.03 Intr - 151115 151068   48  1  0   62  127    71 0.353   5.28
 7.02 Intr - 164927 164769  159  1  0   80   59   103 0.134   4.78
 7.01 Init - 174738 174593  146  0  2   87   82   120 0.912  10.94
 7.00 Prom - 177328 177289   40                              -5.05

 8.04 PlyA - 179000 178995    6                              -0.45
 8.03 Term - 179163 179036  128  1  2   52   49   119 0.045   1.86
 8.02 Intr - 188251 188174   78  2  0  103   65    46 0.340   2.40
 8.01 Init - 198747 198630  118  0  1   44   80    86 0.235   3.81

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init +  73945  74092  148  0  1   90  109    74 0.974  10.02
S.002 Intr +  74916  75209  294  1  0   60   76   120 0.857   4.06
S.003 Init - 148310 148147  164  2  2   57   85   109 0.871   6.75


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815574f:18446788_18648468|GENSCAN_predicted_peptide_1|146_aa
MEIRGKWSFAEHTSFSLRNAAYLIGDSVVLLCSEGKQRRWQVAGNLGEKGGLGGSLSDQE
LDLERLAGGRIKIIQECRFAEYQLELTDDYIIRINRLKMKGRIKVMFGCGGIKTFFALYL
LIGFGQWGHQPTHTVALDLLLCLKAK

>gi568815574f:18446788_18648468|GENSCAN_predicted_CDS_1|441_bp
atggagatacgcgggaagtggagctttgcagagcatacttcattttccttgagaaatgca
gcctatttaattggagattctgtggttctcctgtgtagtgaaggtaagcagagaagatgg
caagtggctggtaacctaggggaaaagggaggtttgggcggcagtctcagtgatcaagaa
ctagatctggagagattggcaggtggaagaataaagatcatccaggagtgcagatttgca
gagtatcaacttgaactaacagatgactacatcattagaattaatcgactgaagatgaaa
ggaagaataaaagtgatgtttggatgcggtggtatcaagacattttttgccctctacctg
ctgattgggtttggccagtggggacaccagcctacgcatacagtggcactggacttgctg
ctgtgtctcaaggccaagtga

>gi568815574f:18446788_18648468|GENSCAN_predicted_peptide_2|260_aa
MENRQAPQTLLAESLLLLLKAETPTCPMSSRSGSKDHPHLPDLRPSFRAQGPPRNILDTC
FSNYVHQLLDLLLVESIGVTGSKSICVFSNVSSCLLRRSKLYHPCIAVRVALLLAESSYR
IFTNTWLTATIGRKIGMCTKIRKLEADMGDMPATLESCMKTDTQHSLSDNHNKETQRQSN
PLISTYKQSHWEVTAAQQSCCSQTAYLDSSSLVRASLKEWQQPQLGAYRQNFQLPETEPL
GERVAVGTASADLNLPSCWL

>gi568815574f:18446788_18648468|GENSCAN_predicted_CDS_2|783_bp
atggaaaacaggcaggcaccccaaacactgctggctgaaagcctgctgcttctgctgaag
gctgagactccaacctgtcccatgagtagccgcagtggctccaaagaccaccctcaccta
cccgacctccgcccttccttcagggcccaggggcccccaagaaacattctggacacatgc
ttcagcaactatgtccaccagctcctagatctgttactggtggaaagtatcggagttact
ggcagcaaatccatctgcgtctttagcaatgtcagttcttgcctcctcagacgcagtaaa
ttgtatcatccatgcatcgcagtcagggtagctttacttttagcagaatcttcatatagg
atattcaccaatacttggttaacagccactattggaagaaaaattggaatgtgcactaag
atacggaagctagaagcagacatgggggacatgcctgcaactctagaaagctgtatgaaa
acagacacacaacactctctgtcagataaccacaacaaagagacacagaggcagtccaac
cctctgataagcacttataaacaaagccactgggaagtcaccgcagctcagcaaagctgc
tgtagccagactgcctacctagattcctcctctttggtcagagcatctctgaaagaatgg
cagcagccccagttaggggcttatagacaaaatttccaactccctgaaacagagcccctg
ggggaaagggtggctgtaggtacagcttcagcagacttaaaccttccttcctgctggctc
tga

>gi568815574f:18446788_18648468|GENSCAN_predicted_peptide_3|401_aa
MAHVSSETQDVSPKDELTASEASTRSPLCEHTFPGDSDLRSMIEEHAFQVLSQGSLLESP
SYTVCVSEPDKDDDFLSLNFPRKLWKIVESDQFKSISWDENGTCIVINEELFKKEILETK
APYRIFQTDAIKSFVRQLNLYGFSKIQQNFQRSAFLATFLSEEKESSVLSKLKFYYNPNF
KRGYPQLLVRVKRRIGVKNASPISTLFNEDFNKKHFRAGANMENHNSALAAEASEESLFS
ASKNLNMPLTRESSVRQIIANSSVPIRSGFPPPSPSTSVGPSEQIATDQHAILNQLTTIH
MHSHSTYMQARGHIVNFITTTTSQYHIISPLQNGYFGLTVEPSAVPTRYPLVSVNEAPYR
NMLPAGNPWLQMPTIADRSAAPHSRLALQPSPLDKYHPNYN

>gi568815574f:18446788_18648468|GENSCAN_predicted_CDS_3|1206_bp
atggcacatgtttcttcagaaactcaagatgtttcccccaaagatgaattaactgcttca
gaagcctccactaggtctccattgtgtgaacacaccttccctggggactcagacttacgg
tcaatgattgaagaacatgcttttcaggttttgtcacaaggatccttgttagaaagtcca
agttacacagtttgtgtctctgagccagataaagatgatgattttctttctctgaacttt
cccaggaaactttggaaaatagtggaaagtgaccaattcaagtctatttcatgggatgag
aatggaacttgcatagtgattaatgaagaactcttcaagaaagaaattttggaaacaaag
gctccttacagaatatttcaaactgatgctatcaaaagttttgttcgacagctcaacctt
tatggatttagtaaaattcaacagaattttcaaagatctgcctttctagccacctttctg
tcagaagagaaagaatcgtctgtcttaagcaagttaaagttctattataatccaaatttc
aagcgtggctatccccaacttttagtaagagtgaagagaagaattggtgttaaaaatgct
tcacctatatctactttattcaacgaagatttcaacaagaagcattttagagcaggggct
aacatggagaatcataattctgccttagctgctgaagctagtgaagaaagtttattttca
gcctctaaaaatttaaatatgcctctaacaagggaatcttctgtcagacagataattgca
aattcatctgtccccattagaagtggtttccctcctccttcaccttcaacctcagttgga
ccatcagaacaaattgcaacagatcaacatgctattttaaatcagttgaccactattcat
atgcactctcatagtacctacatgcaagcaaggggccacattgtgaattttattacaacc
acaacttctcaataccacatcatatctcccttacaaaatggttattttgggctgacagtg
gaaccatctgctgttcccacacgatatcctctggtatcagtcaatgaggctccatatcgt
aacatgctaccagcaggcaacccgtggttgcaaatgcctacgatcgctgatagatcagct
gcccctcattccaggctagctcttcaaccatcaccactggacaaatatcaccctaattac
aactga

>gi568815574f:18446788_18648468|GENSCAN_predicted_peptide_4|126_aa
MTDVASASRDHTGESNPGQRVTKVRVGECGTTLKDTWLLLRNPHENCIAEHAEVLCNDSY
GIFIDLSPKGKFSLNRTSRSVCQGHTMFSLSDQNGQMVEMTMGGEQYPLRWEQQLQQRAA
ETCRVM

>gi568815574f:18446788_18648468|GENSCAN_predicted_CDS_4|381_bp
atgactgatgtggcttcggcaagtcgtgaccatacgggggaatcaaacccaggtcaaaga
gtcaccaaagtgagggtgggagaatgtggaactacactgaaggacacctggctactctta
agaaatccccatgaaaattgcattgcagaacatgcagaggtgctctgcaacgattcctat
ggaatatttattgatttgtcccctaaggggaagtttagcttaaatcgcacctctcggtct
gtgtgccaaggccacactatgttcagcttgtctgaccaaaatggtcagatggtagaaatg
accatgggaggagagcagtaccctctccgctgggagcagcagctgcagcagagagctgca
gagacctgcagagtcatgtaa

>gi568815574f:18446788_18648468|GENSCAN_predicted_peptide_5|126_aa
MVNVYTDSKYTFATLHDNGAIYKEKGLLMAVGKKIKYKEKILQLLDAVCASKKMAVMHCR
GHQKAGTLEAKKNKKIDREARGAAMTTLQFKKKAIAMPLLPKPLLSEVSSYLQMRSPALP
KSLENI

>gi568815574f:18446788_18648468|GENSCAN_predicted_CDS_5|381_bp
atggtcaatgtttatacagattccaaatatacgtttgccacgttgcatgacaatggggct
atatataaagaaaaaggactcttaatggctgtaggcaaaaaaataaagtacaaagaaaaa
attctgcaactcttagatgctgtatgtgcttcgaagaagatggctgttatgcactgcagg
gggcaccaaaaggcaggaacactggaggccaaaaagaacaaaaagatagacagagaggca
agaggggcagcaatgactacccttcagtttaagaagaaagccatagctatgcctctactt
ccaaagcctctcctctcggaggtttcaagttacctccaaatgagaagccctgctttgccc
aagagtctggaaaatatataa

>gi568815574f:18446788_18648468|GENSCAN_predicted_peptide_6|378_aa
MEPKGLQNNSTDSVLLNHGKVRGPRKDPSHKDGMGAGSPPRVYLVIRPRTQDLLANSNET
YTPTYEEELRTHNPTWPDSKQLLLLLFNTKEHRWMAQSTLHWLEANVPFQAYAQFQFPEE
DPHWDSHALTQFQHLQSIKATQLLEVATKVYINCDQEAQREADWRLRKRANLLAAALMER
EAIVTSRRRYRCRCGRGQTGQRLKSQLRLDRDQCAQSKKRGHWKNKCLEGSKRNNSGHKS
IKWPAKDHHTLRGPGINLMRLVETEKYEDNARLGCISQGPQEPVITAEVGDQQMDFMVNT
STNHSEVIQPIEPLSKHDATIIGATEVPEKRPFFWPRSCVIGGQEVQHEILYLPNCRVPL
LGRDLLQKLQAQIAFGTH

>gi568815574f:18446788_18648468|GENSCAN_predicted_CDS_6|1137_bp
atggaacctaaggggttacagaacaattccacggacagcgtgctgctgaaccatgggaag
gttcggggcccaaggaaggacccatcccataaagatggaatgggagccggatcacctccc
agggtgtacctagttatccgacccaggacgcaagatttgctcgctaattcaaatgaaacc
tacaccccaacctatgaagaggaactgaggacacataatccaacttggccagatagtaaa
cagcttctgttgctgctgttcaacactaaagagcaccgatggatggctcagtcaaccctc
cactggctagaagccaatgtgccattccaggcatacgctcagttccagttcccagaggaa
gacccccactgggactcacatgctttgacccagtttcagcacctgcagagcataaaggca
acccagcttttagaagtggccaccaaggtgtacattaactgtgaccaggaggcacaaagg
gaggctgattggagactcaggaagcgggccaatctgctagcggcagccctcatggaaagg
gaagctatcgtcacaagcagacgcagatacagatgcagatgtggaaggggccaaacaggg
cagagactcaaaagtcagctgagactagatagggatcaatgtgcacaatccaaaaagagg
ggacactggaaaaataagtgtttagagggcagtaaaagaaataacagtggacataaatct
ataaaatggccagccaaggaccaccacaccctaagggggccaggcatcaacttgatgagg
ctggtagagactgaaaaatatgaagacaatgcaagactgggctgcatctcccaaggcccc
caggagcccgtgatcacagcagaagtaggggatcaacagatggactttatggtgaacact
agcactaatcactcagaagtgatacagcccatagagccactatctaaacacgatgcaact
attattggggctacagaggtcccagaaaagaggccatttttctggccaaggagttgtgtc
atagggggacaagaagtccaacatgaaatcctatacctcccaaattgccgagttccctta
cttggaagggacctgctccagaaactgcaggcacagattgcttttgggacacactag

>gi568815574f:18446788_18648468|GENSCAN_predicted_peptide_7|399_aa
MEMLKDWSFAEPNLFDVRMAAHLTADSGLILHSEGKQRRGQVTATPGGIEAGKMEMLKDW
SFAEPNLLDVRMAAYLTADSGLILHGEGKQRRGQVTATPWRNFLTAARPQAMQGYKLRLR
NGNFIQSKCKQQIRHAGAMKKPFSQLLNTTPGVWAKDTPPGLAVNHAQEVIAKERLMGKP
FVPHADAGNVPGHLEMDEFSSGDMSHVYAYLEICLLWVLLQLLCPSHINTQETVRTVDVR
AGENRLEHLYESKSYKTALYRNRDQWLSQDPKVRRGIIIKGRGRNVGFALKKGKEIRVKD
KNLRHGGRICHLESVMMRVTTSHPGMSTTHLSQVKWDAVARSGIGGLKSMNMEQRLEVGH
VSNKSQAESPRVLARTPADWSHIHLNNLIRAATLYFLNC

>gi568815574f:18446788_18648468|GENSCAN_predicted_CDS_7|1200_bp
atggagatgttgaaggactggagctttgcagagcctaacttatttgatgtgagaatggca
gcccatttaactgcagattctgggcttatcttgcatagtgaagggaagcagaggagaggg
caagtgactgctacaccaggaggaattgaggctggaaagatggagatgttgaaggactgg
agctttgcagagcctaacttacttgatgtgagaatggcagcctatttaactgcagattct
gggcttatcttgcatggtgaagggaagcagaggagagggcaagtaactgctacaccatgg
agaaattttttaacagctgcaaggccacaagctatgcaaggctacaagttacggctaaga
aatggaaactttatacaaagcaagtgcaagcagcagattagacatgcaggtgcaatgaaa
aaaccattctctcagttacttaataccactcctggagtatgggctaaagacaccccacct
gggttagctgtaaatcatgcacaggaggttattgctaaggaacgactcatgggaaaacca
tttgtgcctcatgcagatgcaggaaacgtgcccgggcatcttgaaatggatgagttctct
tctggagatatgtctcatgtgtacgcatatctggagatatgcctcttgtgggtgctgctg
cagctgctgtgcccatctcatatcaatacccaagaaactgtcagaactgtggatgtgagg
gcaggggagaacagacttgagcacctttatgagagtaagagttataaaactgctctgtac
agaaatagggatcagtggctcagtcaggatcctaaagttaggagagggattataatcaaa
ggcagaggcagaaatgtaggctttgctttgaaaaaggggaaggagatccgtgtaaaggac
aagaacttgcgacatggagggaggatatgtcacttggagtcggtcatgatgagggtgact
acaagtcaccctgggatgagtacaactcatctcagccaagtgaagtgggatgcagtggca
aggagcgggattgggggcttgaagtcgatgaacatggaacagcgacttgaagtaggtcac
gtgtcaaacaaaagccaagcagagtctccccgggtcttggcaaggactcctgcagactgg
tctcacattcatttgaacaatctgatacgggcagctactctttattttctgaactgttag

>gi568815574f:18446788_18648468|GENSCAN_predicted_peptide_8|107_aa
MLQERIHYLCKMSTFMCIRVKRPPNRLCVSNKAFNRLGAVKTLVNKQLYYIQGVDPSTQT
EVQIKSIKTALEPFHPEDEEEFQGDIEKFNNHESDDQQSEPSQSSFK

>gi568815574f:18446788_18648468|GENSCAN_predicted_CDS_8|324_bp
atgttacaggagcgaatccattatctttgtaaaatgagcactttcatgtgcatccgtgtg
aagagaccaccaaacaggctttgtgtgagcaataaagcttttaatcgcctgggtgcagtg
aaaaccctggttaataagcaactttactatatacaaggtgtggatcctagcacccagaca
gaagtgcagataaagtcaattaaaactgcactggagcccttccacccagaggatgaggag
gagtttcagggtgacatagaaaagtttaataaccatgagtctgacgatcagcaaagtgaa
ccatcacagtctagttttaaataa