GENSCAN 1.0	Date run:  4-Nov-116	Time: 16:54:12

Sequence gi568815596r:234396011_234596586 : 200576 bp : 45.58% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   8954   9045   92  1  2   54   47    81 0.600   0.62
 1.02 Term +  10196  10415  220  2  1   88   45   183 0.880  10.51
 1.03 PlyA +  10961  10966    6                               1.05

 2.03 PlyA -  11785  11780    6                               1.05
 2.02 Term -  14798  14650  149  0  2   47   42   123 0.574   1.66
 2.01 Init -  20948  20753  196  2  1   66   99    72 0.596   5.28
 2.00 Prom -  22273  22234   40                              -4.56

 3.00 Prom +  26142  26181   40                              -5.46
 3.01 Init +  32614  32771  158  0  2   63   94    52 0.138   2.70
 3.02 Intr +  51657  51819  163  0  1   93   49   116 0.629   8.18
 3.03 Intr +  66500  66709  210  1  0   66   81    61 0.052   2.31
 3.04 Intr +  67030  67118   89  0  2   93   48    10 0.013  -3.73
 3.05 Intr +  77327  77538  212  2  2  121   54   136 0.156  12.06
 3.06 Intr +  88775  88898  124  0  1   96   59    68 0.107   4.34
 3.07 Term +  92109  92187   79  0  1   78   34    44 0.016  -4.76
 3.08 PlyA +  92546  92551    6                               1.05

 4.09 PlyA -  93512  93507    6                               1.05
 4.08 Term - 100866  99998  869  1  2  -27   38  1666 0.047 142.93
 4.07 Intr - 129233 129063  171  0  0   60   81    60 0.065   2.41
 4.06 Intr - 135851 135696  156  0  0   79  103    36 0.255   4.18
 4.05 Intr - 152300 152260   41  1  2   84   96     8 0.004  -0.93
 4.04 Intr - 161218 161025  194  1  2   54  105    59 0.034   2.49
 4.03 Intr - 165230 165125  106  1  1   82  107    61 0.046   7.62
 4.02 Intr - 172207 172081  127  2  1   74   66    17 0.048  -2.16
 4.01 Init - 174998 174944   55  2  1   75   87    28 0.077   2.85
 4.00 Prom - 175156 175117   40                              -8.96

 5.06 PlyA - 175186 175181    6                               1.05
 5.05 Term - 175716 175613  104  1  2   92   44   108 0.923   5.24
 5.04 Intr - 183735 183512  224  2  2   99   53   102 0.402   5.57
 5.03 Intr - 184853 184629  225  1  0   21   34   194 0.612   4.40
 5.02 Intr - 187655 187362  294  1  0   58   77   132 0.145   5.22
 5.01 Init - 195986 195904   83  2  2   82   44    49 0.570   0.34

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init - 141384 141229  156  0  0  103   60   107 0.864   9.31
S.002 Term - 195290 195071  220  1  1  108   55   102 0.884   5.41


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815596r:234396011_234596586|GENSCAN_predicted_peptide_1|103_aa
MVDCKRWHPDGVFAISLRMPFSSTCPIARLPHIPHRNACTDVTRDGHRHACSSIIHDRHQ
LATTQMSTNSTMDEYIAAYPYNGRQHAQSLLPKLYEKSFYPVT

>gi568815596r:234396011_234596586|GENSCAN_predicted_CDS_1|312_bp
atggtagattgcaagagatggcatccggatggggtctttgctatcagcctgcggatgccc
ttcagcagcacctgtcccatcgcaagacttccgcatataccccacagaaatgcttgcaca
gatgttacaagagatggacacaggcatgcatgtagcagcattattcatgaccgccaccag
ctggcaacaacacaaatgtccaccaactccacgatggatgaatacatcgcagcgtatccc
tacaatggaagacagcacgcgcagtctttattgccaaagctctatgagaagtctttctat
ccagtaacatga

>gi568815596r:234396011_234596586|GENSCAN_predicted_peptide_2|114_aa
MVDERAGWGRSYGAASPLAAHRGGWPYYYHSPSDVNIVMMMCLMQKLEKFLTELTCCLKA
KTGQTGASEKECELCREANEECVHLLASTHGSEKDIPGTGALKAEDKHDGYQRT

>gi568815596r:234396011_234596586|GENSCAN_predicted_CDS_2|345_bp
atggtggacgagagggcaggctggggcagaagttatggcgctgccagcccattggcagcc
cacaggggtggttggccatactactatcactctccgtctgatgttaatatcgtgatgatg
atgtgcttgatgcagaaactagagaaattcctcacggagcttacctgttgtctaaaagcg
aaaactggtcaaactggggcttcagagaaagaatgtgagctatgcagagaagcgaatgag
gaatgtgttcacctcttagcctcaacccatgggtcagaaaaagacatccctggaactgga
gctttgaaagcagaagataaacatgatggatatcagagaacttaa

>gi568815596r:234396011_234596586|GENSCAN_predicted_peptide_3|344_aa
MFSFAHSLTQQISQHIPRVPGIQGKPVVRLKSIKRLNSHQSTSSWSIAFEHGSKAHSQGE
GVKLQQLSLLSIITKAKDSAIYLNRTAYRIFQSEIRNVKRFSHGNYRIIGACFSHFSQQL
SPGQPSRLPLLPPYPTAQGSIVAISNWSFWCALESIPWAYAIFQLKNALQTSLWLLKRLH
TLQGFGIDLFFCPQQPPGSQGIGACSWLRRTLWQHAAYLPAFMHGCTPQTPWSPAIIQLI
PSWYSPGPPCCLLLLKSIHAKLANSTCLMPPLLLRDLGGCGGQNNGPPNAHVLIAETCEY
VTPHGIKNAVDVIKLRTLRKSLKELEKDFEGGRILHMAGTRTTE

>gi568815596r:234396011_234596586|GENSCAN_predicted_CDS_3|1035_bp
atgttttcatttgcccactcactcactcagcaaatttcacagcatattccccgtgtgcca
ggtattcagggaaagcccgttgtccgtctgaagtctattaagaggttaaatagtcatcag
tccacttcaagctggtcgatcgcctttgagcatgggagcaaagcccacagccagggagag
ggggtcaaactgcagcagctctcacttctgagcatcataacgaaagccaaagacagcgcc
atttacctaaatcggacagcctacagaatcttccagtctgaaataagaaatgtcaagcgt
tttagccatgggaattataggatcataggagcatgtttctcccacttcagtcagcagctt
tcccctggacagccttccaggcttccactactgcccccctaccccactgcccagggttca
atagttgccatttccaactggtccttctggtgtgccctggagagcattccctgggcctac
gcaatcttccaacttaagaatgctctgcagacatcactctggttgctcaagaggctgcac
acattacaaggttttggaattgatttgtttttctgcccacagcagcctccaggctctcag
ggcattggagcctgttcctggctccggcgcaccctctggcagcacgctgcctatctgcca
gccttcatgcatggctgcactccacagacgccctggtcaccagccatcatccagctgatc
cccagctggtactcaccgggaccaccatgctgcttgttactgttgaaatccatccatgcc
aagttggccaatagcacctgcctgatgcccccgctcctactcagggaccttggagggtgt
ggtgggcagaataatggtcccccaaatgctcatgtcctaattgctgaaacctgtgaatat
gttaccccacacggcataaagaacgctgtggatgtgattaagctgaggaccttgaggaaa
tctctgaaagagttggagaaggattttgaggggggcagaattcttcacatggcaggtacc
aggaccacagagtaa

>gi568815596r:234396011_234596586|GENSCAN_predicted_peptide_4|572_aa
MGLTCFYEVPVVFSGFSVGPHPEACMLGGCIPSLDEGAATERLHRKHILPLKSVGNGGMI
PYPQSDLQETKTQRKSVISSSGFSPQEFMAASILELPTFSSWKCELGRWTRPQGAGCLVG
PSEKGTSCQGGPGHLPLCRCDVHNCWDTKHFPSELATEQTCGKPRGHELWTLWSDIKQCD
VGVWVEACRTEACLVQQFQERRGEDQAKPTPGKSTGVHTCKNGRVHDSFWLISTPMSEPS
SGELPSVLAQATITKYYKLGGLNNRHLFSRSSGDWKSWMKIRQERAQAWGGRRTSEAASR
ETKPRVETRCPPIASPAGEGAGTAASERAKPCARGDAEPRGRCGRRRAGPRCARPRRARD
CSGGGALPPQPQWLAPQPGAMGNISSNISAFQSLHIVMLGLDSAGKTTVLYRLKFNEFVN
TVPTIGFNTEKIKLSNGTAKGISCHFWDVGGQEKLRPLWKSYSRCTDGIIYVVDSVDVDR
LEEAKTELHKVTKFAENQGTPLLVIANKQDLPKSLPVAEIEKQLALHELIPATTYHVQPA
CAIIGEGLTEGMDKLYEMILKRRKSLKQKKKR

>gi568815596r:234396011_234596586|GENSCAN_predicted_CDS_4|1719_bp
atgggactcacctgcttctatgaggttcctgtggttttttctgggttctctgttgggccc
cacccagaggcatgtatgctgggtggctgcattccatcactcgacgaaggagctgctaca
gagcgtctccatcggaagcacatcctccctctgaaatcagtgggtaatggtgggatgata
ccgtatcctcagtcagatctccaagagaccaagactcagaggaagagcgttattagcagt
tcagggttctcaccccaagagttcatggcagcttcgatcctggaactgcccaccttctct
tcttggaagtgtgaacttgggagatggaccaggcctcagggtgcaggatgcctcgtgggg
ccatctgaaaaaggcacatcctgccagggaggaccaggccacctgcccctctgccggtgt
gatgtccataactgctgggacaccaagcattttccttccgagctggccactgagcaaacc
tgtggaaagcccagaggccacgagctttggacgctgtggtcagatataaaacaatgtgat
gtaggagtttgggttgaggcctgcaggactgaagcctgtctggttcagcagttccaggag
aggaggggagaggatcaagccaaacccactcctggaaaaagcacaggagtccatacgtgc
aagaatgggagggtgcacgacagcttctggctgatttccacaccaatgtctgaaccctct
tctggggagctgccatctgtcctagctcaggctaccataacaaaatactacaagctgggt
ggcttaaacaatagacacttattttctcgcagttctggggactggaagtcctggatgaag
atccggcaagagcgagcccaggcctggggagggcgccgaacatctgaggcggcttcgcgg
gagacaaagccgcgcgtagagacgcgatgcccgccgatcgcgagcccggccggcgagggc
gcggggactgcggcgtctgagcgcgccaagccgtgcgcccgcggggacgccgagccccgg
ggccggtgcgggcggcggcgggcggggcccaggtgcgcccggccgcgtcgggcccgtgac
tgctcggggggcggcgccctcccgccgcagccgcagtggctggcgccgcagccaggagcc
atgggcaacatctcctctaacatctcggccttccagtccctgcatatcgtcatgttgggc
ttggactcggccggcaagaccacggtgctctaccggctcaagttcaacgagttcgtgaac
acggtgcccaccatcggcttcaacaccgagaagatcaagctgagcaacggcacggccaag
ggcatcagctgccacttctgggacgtgggcggccaggagaagctgcggccgctgtggaag
tcctacagccgctgcacggacggcatcatctacgtggtggactcggtggacgtggaccgg
ctggaggaggccaagacggagctgcacaaggtgaccaagttcgccgagaaccagggcacg
ccgctgctggtcatcgccaacaagcaggacctgcccaagtcgctgccggtggcagagatt
gagaagcagctggcgctgcacgagcttatcccggccaccacctatcacgtccagccggcg
tgcgccatcatcggcgagggcctcaccgagggcatggacaagctctatgagatgatcctg
aaacgcaggaagtccctcaagcagaagaagaagcggtaa

>gi568815596r:234396011_234596586|GENSCAN_predicted_peptide_5|309_aa
MAATSTVGSLHGYHLQEVVSFATSKVNRTQCKILGTFIQIPVNCKLNAYEIRVGPIRSLG
RHEVPEYVSEGSQRNGQRAHGAYNNSESLLVVGMLPEEADLLAHSPGAGKETLDLPSNLL
WKQEVWPGNQSAARSIQQGESLKCDRGAHGYQRGSTYLCLGTFTDGNKVIASFKSCKALL
DIKKASSKFLVLYQAWPTVTIDSGPQAKSKPSQMLLVDVQRGSESWRILNQSQEHGLEVT
LIPSAHNSGARTGPLTLLNTRGPGQTVLNILPLSEELEAVNIATNPADYIGGGFAYIADG
GGVLGKHKA

>gi568815596r:234396011_234596586|GENSCAN_predicted_CDS_5|930_bp
atggctgctacatccactgttggttctcttcacgggtaccatttgcaggaagtagtcagt
tttgccacaagcaaagtaaacagaacccaatgcaagatacttggcacttttatacagatt
cctgttaactgcaagctaaatgcttatgaaattcgggttggaccaatcagaagcttggga
aggcacgaggtccctgagtatgttagtgaaggttcccagagaaatggccaaagagcacat
ggtgcctacaataactctgaaagtttgctggtggtagggatgcttccagaagaagcagat
cttctagcacattcacctggtgctgggaaagagaccttggaccttcccagcaacctactg
tggaagcaagaggtgtggcctgggaaccagtcagcagcaaggtccatacagcagggtgag
tctctgaagtgtgaccgaggtgctcatggctatcagaggggcagcacctatctgtgtctt
ggaaccttcactgatgggaacaaagtcattgcttccttcaagagctgcaaagccttgttg
gacatcaagaaagcatcctcaaagttcctggtactttaccaagcatggcccacagtgacc
attgactcagggcctcaggctaagtcaaaaccctcccagatgctgctggtggacgtgcag
aggggaagtgagtcctggaggatcttaaaccagagccaagagcatggcctagaggtgaca
ctcatcccttctgctcacaactcaggggccagaacgggacctctgaccctactcaacacc
agggggccaggacaaacagtcctgaacatcctgccattatcggaagaattagaagccgtc
aacatagctacgaacccagcagattatattggtggcggctttgcatacattgctgatggg
ggaggagttctaggaaagcataaagcatag