GENSCAN 1.0	Date run:  4-Nov-116	Time: 16:37:17

Sequence gi568815594f:54000345_54201919 : 201575 bp : 40.76% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +  21815  22007  193  0  1   61  110   197 0.459  16.83
 1.02 Intr +  23602  23683   82  1  1   65   65    97 0.565   3.82
 1.03 Term +  26361  26375   15  2  0  106   48    10 0.311  -3.94
 1.04 PlyA +  27526  27531    6                               1.05

 2.00 Prom +  29366  29405   40                              -3.25
 2.01 Sngl +  44710  46176 1467  0  0   70   48   426 0.975  32.12
 2.02 PlyA +  46220  46225    6                               1.05

 3.03 PlyA -  47518  47513    6                               1.05
 3.02 Term -  57339  57204  136  2  1   77   38    71 0.113  -2.49
 3.01 Init -  63956  63838  119  2  2   85   58   279 0.836  24.32
 3.00 Prom -  68861  68822   40                              -5.55

 4.00 Prom +  69603  69642   40                              -4.95
 4.01 Sngl +  86748  87020  273  2  0   59   35   235 0.979  10.38
 4.02 PlyA +  87131  87136    6                               1.05

 5.00 Prom +  91351  91390   40                              -7.65
 5.01 Init +  92822  92934  113  1  2   74   94    85 0.955   7.43
 5.02 Term +  92993  93161  169  2  1   31   44   163 0.591   2.57
 5.03 PlyA +  93307  93312    6                               1.05

 6.00 Prom +  93579  93618   40                              -7.75
 6.01 Init + 100001 100574  574  1  1   79   45   264 0.158  15.38
 6.02 Intr + 101238 101481  244  1  1  106   51   283 0.392  22.03
 6.03 Term + 101617 101779  163  1  1   84   45   121 0.378   3.83
 6.04 PlyA + 102132 102137    6                               1.05

 7.00 Prom + 106196 106235   40                              -7.75
 7.01 Init + 107250 107340   91  2  1   47   76    78 0.714   3.44
 7.02 Intr + 107826 107961  136  1  1   67   43    98 0.779   1.91
 7.03 Intr + 108573 108723  151  0  1   25   39   193 0.389   7.34
 7.04 Intr + 109305 109589  285  2  0  111   60    48 0.016   0.91
 7.05 Intr + 129177 129308  132  2  0   91   87    46 0.512   4.72
 7.06 Intr + 138889 139135  247  0  1   91   56   110 0.420   4.21
 7.07 Intr + 139605 139731  127  1  1   65   70    81 0.716   2.82
 7.08 Term + 140947 141166  220  1  1   31   48   143 0.660   0.13
 7.09 PlyA + 141452 141457    6                               1.05

 8.06 PlyA - 142271 142266    6                               1.05
 8.05 Term - 149703 149647   57  0  0  142   48    65 0.174   4.61
 8.04 Intr - 165779 165693   87  2  0   82   97    24 0.697   1.95
 8.03 Intr - 167153 167032  122  0  2   72   56   125 0.603   6.99
 8.02 Intr - 169822 169671  152  0  2   35   46    81 0.348  -2.51
 8.01 Init - 170068 169890  179  1  2   64   94   170 0.399  13.98
 8.00 Prom - 175266 175227   40                              -4.55

 9.02 PlyA - 179701 179696    6                               1.05
 9.01 Term - 195013 194922   92  2  2  128   42    81 0.685   4.40

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815594f:54000345_54201919|GENSCAN_predicted_peptide_1|96_aa
XPYWISDCPTRPAATPRAPGTLAQGSLTDFFPDLLSLVAEDRRCPIASEASWTITDALGN
SYSGGKLESFTASKGHQKVSDLIVQGNAYADKYAKL

>gi568815594f:54000345_54201919|GENSCAN_predicted_CDS_1|291_bp
ngaccctactggatatcagactgtccaactcgcccggcagccactcccagagcccctgga
actctggcccaaggctctctgactgacttcttcccagatcttctcagcttagtggctgaa
gaccgacgctgcccgatcgcctcagaagcttcctggaccatcacagacgctctgggtaac
tcttacagtggagggaagctggagtcattcactgcaagcaagggccatcaaaaggtgtca
gatctcatcgttcagggcaacgcttatgctgataagtatgccaaactctga

>gi568815594f:54000345_54201919|GENSCAN_predicted_peptide_2|488_aa
MDKFLDTYTLPRLNQEEVECLNRPITGSEIEAIISSLPIKKSPGPDGFTAEFYQRYKEEL
VPFLLKLFQSIEKQGILPNSFYEASIILIPKPGRDTTKKENFRPISLMNSDAKILNKILA
NQIQQHIKKLIHHDQVGFIPGMQGWFNIRKSINVIQHINRTKDKNHMIISIDAEKAFDKI
QQPFMLKTLNKLGIDGTYLKIIRAIYDKPTANIILNGQKLEAFPLKTGTRQGCPLSPLIF
NIVLEVLARAIRQEKEIKGIQLGKEEVKLSLFADDMIVYLENPIVSAQNLLKLISNFSKV
SGYKIKVQKSQAFLYTNNRQTESQIMSELPFTIASKRIKYLGIQLTRDVKDLFKENYKPL
LKEIKKDTNKWKNIPCSWIARINIVKMDTLPTVIYRFNAIPIKLPMTFFTELEKTTLKLI
WNQKRARIAKSILSQKNKAGGITLPDFKLYYKDTVTKTAWYWYQNRYRPMEQNRALRKNA
TYLQLSDL

>gi568815594f:54000345_54201919|GENSCAN_predicted_CDS_2|1467_bp
atggataaattcctcgacacatacactctcccaagactaaaccaggaagaagttgaatgt
ctgaatagaccaataacaggctctgaaattgaggcaataattagtagcttaccaatcaaa
aaaagtccaggaccagatggattcacagccgaattctaccagaggtacaaggaggaactg
gtaccattccttctgaaattattccaatcaatagaaaaacaaggaatcctccctaactca
ttttatgaggccagcatcatcctgataccaaagccgggcagagacacaacaaaaaaagag
aattttagaccaatatccttgatgaacagtgatgcaaaaattctcaataaaatactggca
aaccaaatccagcaacacatcaaaaagcttatccaccatgatcaagtgggcttcatccct
gggatgcaaggctggttcaacatacgaaaatcaataaacgtaatccagcatataaacaga
accaaagacaaaaaccacatgattatctcaatagatgcagaaaaggcctttgacaaaatt
caacaacccttcatgctaaaaactctcaataaattaggtattgatgggacatatctcaaa
ataataagagctatctatgacaaacccacagccaatatcatactgaatgggcaaaaactg
gaagcattccctttgaaaactggcacaagacagggatgccctctctcaccactcatattc
aacatagtgttggaagttctggccagggcaatcaggcaggagaaggaaataaagggcatt
caattaggaaaagaggaagtcaaattgtccctgtttgcagatgacatgattgtatatcta
gaaaaccccatcgtctcagcccaaaatctccttaagctgataagcaacttcagcaaagtc
tcaggatacaaaatcaaggtgcaaaaatcacaagcattcttatacaccaataacagacaa
acagagagccaaatcatgagtgaactcccattcacaattgcttcaaagagaataaaatac
ctaggaatccaacttacaagggatgtgaaggacctcttcaaggagaactacaaaccactg
ctcaaggaaataaaaaaggatacaaacaaatggaagaacattccatgctcatggatagca
agaatcaatattgtgaaaatggacacactgcccacggtaatttatagattcaatgccatc
cccatcaagctaccaatgactttcttcacagaattggaaaaaactactttaaagctcata
tggaaccaaaaaagagcccgcatcgccaagtcaatcctaagccaaaagaacaaagctgga
ggcatcacgctacctgacttcaaactatactacaaggatacagtaaccaaaacagcatgg
tactggtaccaaaacagatatagaccaatggaacagaacagagccctcagaaaaaatgcc
acatatctacaactatctgatctttga

>gi568815594f:54000345_54201919|GENSCAN_predicted_peptide_3|84_aa
MADFDEIYEEEEDEERALEEQLLKYSPDPVVVRGSGHVTVYCTKLWVYNETQNETHIVSA
LMEFTANRQILSDKVALKEMDEIL

>gi568815594f:54000345_54201919|GENSCAN_predicted_CDS_3|255_bp
atggcggatttcgacgaaatctatgaggaagaggaggacgaggagcgggccctggaggag
cagctgctcaagtactcgccggacccggtggtcgtccgcggctccggtcacgtcaccgtg
tattgcacaaagctctgggtatataatgaaacccaaaatgaaacacacatagtttctgcc
ctcatggagtttacagctaatagacaaattttatctgataaagttgcactgaaggaaatg
gatgagatcctgtga

>gi568815594f:54000345_54201919|GENSCAN_predicted_peptide_4|90_aa
MWGRSAENFLASGSVRKTRKNKQRTPGNRYGGSTSKAPQTPGKERAWADLTVESEDAFKN
RMEVKVKMPEESKPWLAGDWNLVTKQKQLF

>gi568815594f:54000345_54201919|GENSCAN_predicted_CDS_4|273_bp
atgtggggtcgctctgcagagaacttcttagcttcaggatccgtgaggaagaccagaaag
aacaaacagaggactcctggaaacagatatgggggcagtaccagcaaagcacctcagacc
ccagggaaggaaagagcctgggcagacctcactgttgaaagcgaggacgcatttaagaac
agaatggaagttaaagtgaagatgcctgaagaatcgaaaccatggcttgctggggactgg
aacttagttaccaagcagaagcagctgttttaa

>gi568815594f:54000345_54201919|GENSCAN_predicted_peptide_5|93_aa
MQARLLVQELPHSESSENVPTSIVIYSKGDCFPPMQSRAQSQVGTARTPEPLTGVGSGEV
NVTAEQTYARKPRDRKAPHWAPSGCERQAVEEP

>gi568815594f:54000345_54201919|GENSCAN_predicted_CDS_5|282_bp
atgcaggcaaggctcttggttcaagaactgccacacagtgagagctcagaaaatgtacct
acgagtattgtcatatactcgaaaggcgactgttttcctcctatgcaaagcagggcgcag
tcccaagtagggacggccaggacgccagagcctttgacgggggtggggagtggcgaggtt
aatgtaactgctgaacaaacatatgcccggaaaccgagggatagaaaggccccacactgg
gcgccttcagggtgcgagcgccaggctgtggaggagccttag

>gi568815594f:54000345_54201919|GENSCAN_predicted_peptide_6|326_aa
MSRSFYVDSLIIKDTSRPAPSLPEPHPGPDFFIPLGMPPPLVMSVSGPGCPSRKSGAFCV
CPLCVTSHLHSSRGSVGAGSGGAGAGVTGAGGSGVAGAAGALPLLKGQFSSAPGDAQFCP
RVNHAHHHHHPPQHHHHHHQPQQPGSAAAAAAAAAAAAAAAALGHPQHHAPVCTATTYNV
ADPRRFHCLTMGGSDASQVPNGKRMRTAFTSTQLLELEREFSSNMYLSRLRRIEIATYLN
LSEKQVKIWFQNRRVKHKKEGKGTQRNSHAGCKPGNAKAWGTQGPESLLIAVVPSGEETN
LEVLEWTSRDLTLRVSFLTCLSRTPT

>gi568815594f:54000345_54201919|GENSCAN_predicted_CDS_6|981_bp
atgtcgcgctccttctatgtcgactcgctcatcatcaaggacacctcacggcctgcgccc
tcgctgcctgaaccgcaccccgggccggatttcttcatcccgcttggcatgccgccccca
ttggtgatgtccgtgtccggccccggctgcccgtcccgcaagagcggcgcgttctgcgtg
tgccctctctgcgtcacttcgcacctgcactcctctcgggggtctgtgggcgccggcagc
gggggcgcaggggccggggttaccggggccggaggcagtggggtggcaggggccgcaggg
gcactgcctctgcttaagggccagttctcttcggctcctggggacgcgcagttttgcccg
cgggtgaaccatgcgcatcatcaccaccacccgccgcagcaccaccatcaccatcatcag
ccccagcagcctggctcggccgcggcggcggcagcagcagcagcggcggcggcggccgcg
gcggccttggggcacccgcagcaccacgcacctgtctgcaccgccaccacctacaacgtg
gcggacccgcggagattccactgcctcaccatgggaggctctgacgccagccaggtaccc
aatggcaagaggatgaggacggcgttcactagcacgcaactcctggagctggagagagaa
ttctcttccaacatgtacctgtctcgactccggaggattgaaatcgccacttacctgaac
ctgtcggagaagcaggtgaaaatctggtttcagaaccgccgagtgaagcacaagaaggag
gggaagggcacgcagaggaacagtcacgcgggctgcaaaccaggcaacgccaaggcgtgg
ggcacccaggggccagaatccttgctcattgcagtggtcccatctggagaagaaacgaac
ctggaagttctggaatggacaagccgggacctgacccttcgcgtctccttcttgacctgt
ttatctaggactccaacttga

>gi568815594f:54000345_54201919|GENSCAN_predicted_peptide_7|462_aa
MGKSSLPMSGSRLQGAEASLVSVCCEGMEQVSPGHGSILLALRGKRRMLKLPFLLGYLLR
AQASRNPTASSVAGSGPGFELSKQATRKDILNAALSINQEKRTAWYRNHNHLPVLQRLTW
ALREKQVGGGEGRWVDAEGGRLSLGSLPPEQRRLCPRGKPRLSGSRGSEWLPRPLRSQQG
QEDLAGTSVRAGRDVCPSLASWPSVGWDALDHRRRKEAPQPDFQYFPLLKVDILVLQILE
KGFQFFPMQYDTSCESVIYGFYYVEQRPCSTENLGAWERESAAIVRLFIEPSAPLLQWKA
EPGSTQLMFIWPSSSQREIVHPTGGSLSSSKPHYRGLECSGALSELKGTSSATVGWSNKQ
TLQVPTSKPRLLVSISGPAMDQKEAHYSEENSEFYQTNLTKRLKLLKRNEILVLKSTTAM
LKNASGSLNNRRDQAEERINELEDRLFENPQSEETKRKSKKQ

>gi568815594f:54000345_54201919|GENSCAN_predicted_CDS_7|1389_bp
atgggaaagagctccctgcctatgagtggcagccggctccaaggagcagaagccagcttg
gtctcagtttgctgcgaagggatggagcaggtctcccctggccatggctcaatcctccta
gctctccggggaaagaggaggatgctaaagctgccattcctacttgggtatctactgcgg
gcacaggcatctcggaatcccactgcatcatcggtggcaggaagtggacctggatttgaa
ctgtcaaaacaagcaacaagaaaagatattctgaacgcagccctgtcaatcaaccaggag
aaacgaacagcgtggtatcgaaatcataatcaccttccagttcttcagcgcctcacttgg
gccttacgtgagaagcaagtcgggggtggggaggggcggtgggtggacgcagagggagga
aggctcagccttggatccttgccacctgaacaacgtcgcctctgcccacgtggaaagcct
cgcttgtctggcagccggggttctgaatggttgccgcgacccctgcgctcccagcagggc
caagaggacctcgcgggcaccagcgtccgggcgggaagggacgtgtgcccaagcctcgcc
tcctggccctcagtgggctgggacgcccttgatcaccggcgcaggaaagaggctccccag
cccgacttccagtactttccattgttgaaagtggacatacttgtgctccagatcttagag
aaaggcttccagtttttccccatgcagtatgatactagctgtgagtctgtcatatatggc
ttttattatgttgagcagcggccatgtagcacagagaatctgggtgcttgggagagggaa
agtgcagcaattgtgaggcttttcattgaacccagtgctcccctgttacagtggaaagca
gaaccaggttctactcagctgatgttcatttggcccagctctagccagagagaaattgtc
catcccactggtgggagcttgagttccagcaagcctcattaccgtgggctggagtgctct
ggggcactaagtgaacttaagggtaccagctcagccacagtggggtggagcaataagcag
actcttcaggtccccacgtccaagcctaggctcttggttagcatttctggacctgccatg
gaccagaaggaagcccactactctgaagagaattcagaattctatcagacaaatttaaca
aagagattgaagttattaaaaagaaatgaaattctagtgctgaaaagtacaactgccatg
ctgaagaatgcatctgggtctcttaataacagacgtgatcaagcagaagaaagaattaat
gagcttgaagacaggctatttgaaaatccacagtcagaggagacaaaaagaaagagtaaa
aaacaatga

>gi568815594f:54000345_54201919|GENSCAN_predicted_peptide_8|198_aa
MEAGTIELPNRGTDWTGTMSKKHNGFGSQGFVRKWSAPVTCNPGRLNERESSRRHYTEGR
TGKRKAKQQELNSRQGFGAGFQSVGPEPVGARIPDTDRKGSEVEDRDWEHYMVFIPSGRY
GNKAPSESREQPSPGTDPASTLILDFSASRTTSILHQSSRLWEVDHVLQQFPDSWNTVFK
VGEIEVYKGEREEADAET

>gi568815594f:54000345_54201919|GENSCAN_predicted_CDS_8|597_bp
atggaggctggcacgatagagctgccaaatagaggtactgactggactggcacaatgtcc
aagaaacacaacggatttggctctcagggttttgttcggaaatggtcagctcctgtgact
tgcaatccaggtaggctaaatgagagggaatccagccgcagacactacacagagggcagg
actggcaagaggaaagcaaagcagcaggagctcaattctaggcagggatttggagcaggg
tttcagtcagtagggcctgaaccagtaggggccaggatcccagatacagacaggaaagga
tcagaggtggaggatagagactgggagcactacatggtattcatcccctctggaagatac
ggcaacaaggcaccatccgaaagcagagagcagccctcgccaggcactgaccctgccagc
accttaatcttggacttctcagcctctagaactacatccattcttcaccaatcatccagg
ctttgggaagtagaccatgtactgcagcaatttcctgactcctggaacaccgtcttcaag
gtgggtgagatagaagtctataaaggggaaagagaagaagctgatgctgaaacttaa

>gi568815594f:54000345_54201919|GENSCAN_predicted_peptide_9|30_aa
XKLSMVDLQGWETEESTVAQHEEAEPGQDA

>gi568815594f:54000345_54201919|GENSCAN_predicted_CDS_9|93_bp
ngtaaattgagcatggtagacctccaaggttgggagacagaggaatccacagtggcccag
catgaggaagcagagcctgggcaggatgcataa