Result of FASTA (ccds) for pF1KB8909
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB8909, 244 aa
  1>>>pF1KB8909 244 - 244 aa - 244 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 8.2831+/-0.000901; mu= 1.9598+/- 0.053
 mean_var=243.4958+/-53.436, 0's: 0 Z-trim(114.9): 780  B-trim: 834 in 1/51
 Lambda= 0.082192
 statistics sampled from 14501 (15438) to 14501 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.799), E-opt: 0.2 (0.474), width:  16
 Scan time:  2.400

The best scores are:                                      opt bits E(32554)
CCDS6633.1 KLF9 gene_id:687|Hs108|chr9             ( 244) 1700 213.7 8.9e-56
CCDS10025.1 KLF13 gene_id:51621|Hs108|chr15        ( 288)  608 84.3 9.5e-17
CCDS12075.1 KLF16 gene_id:83855|Hs108|chr19        ( 252)  547 77.0 1.3e-14
CCDS5825.1 KLF14 gene_id:136259|Hs108|chr7         ( 323)  545 76.9 1.8e-14
CCDS47905.1 KLF10 gene_id:7071|Hs108|chr8          ( 469)  497 71.4 1.2e-12
CCDS6294.1 KLF10 gene_id:7071|Hs108|chr8           ( 480)  497 71.4 1.2e-12
CCDS5372.1 SP8 gene_id:221833|Hs108|chr7           ( 490)  484 69.9 3.7e-12
CCDS43555.1 SP8 gene_id:221833|Hs108|chr7          ( 508)  484 69.9 3.7e-12
CCDS46453.1 SP9 gene_id:100131390|Hs108|chr2       ( 484)  471 68.3 1.1e-11
CCDS44898.1 SP1 gene_id:6667|Hs108|chr12           ( 778)  473 68.8 1.2e-11
CCDS8857.1 SP1 gene_id:6667|Hs108|chr12            ( 785)  473 68.8 1.2e-11
CCDS54333.1 KLF11 gene_id:8462|Hs108|chr2          ( 495)  468 68.0 1.4e-11
CCDS1668.1 KLF11 gene_id:8462|Hs108|chr2           ( 512)  468 68.0 1.4e-11
CCDS33322.1 SP5 gene_id:389058|Hs108|chr2          ( 398)  456 66.4 3.2e-11
CCDS5373.1 SP4 gene_id:6671|Hs108|chr7             ( 784)  458 67.0 4.3e-11
CCDS3036.1 KLF15 gene_id:28999|Hs108|chr3          ( 416)  452 66.0 4.5e-11
CCDS14373.1 KLF8 gene_id:11279|Hs108|chrX          ( 359)  447 65.3 6.2e-11
CCDS73475.1 SP7 gene_id:121340|Hs108|chr12         ( 413)  446 65.3 7.4e-11
CCDS44897.1 SP7 gene_id:121340|Hs108|chr12         ( 431)  446 65.3 7.6e-11
CCDS46452.1 SP3 gene_id:6670|Hs108|chr2            ( 713)  450 66.0 7.7e-11
CCDS2254.1 SP3 gene_id:6670|Hs108|chr2             ( 781)  450 66.0 8.2e-11


>>CCDS6633.1 KLF9 gene_id:687|Hs108|chr9                  (244 aa)
 initn: 1700 init1: 1700 opt: 1700  Z-score: 1114.8  bits: 213.7 E(32554): 8.9e-56
Smith-Waterman score: 1700; 100.0% identity (100.0% similar) in 244 aa overlap (1-244:1-244)

               10        20        30        40        50        60
pF1KB8 MSAAAYMDFVAAQCLVSISNRAAVPEHGVAPDAERLRLPEREVTKEHGDPGDTWKDYCTL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 MSAAAYMDFVAAQCLVSISNRAAVPEHGVAPDAERLRLPEREVTKEHGDPGDTWKDYCTL
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 VTIAKSLLDLNKYRPIQTPSVCSDSLESPDEDMGSDSDVTTESGSSPSHSPEERQDPGSA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 VTIAKSLLDLNKYRPIQTPSVCSDSLESPDEDMGSDSDVTTESGSSPSHSPEERQDPGSA
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB8 PSPLSLLHPGVAAKGKHASEKRHKCPYSGCGKVYGKSSHLKAHYRVHTGERPFPCTWPDC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 PSPLSLLHPGVAAKGKHASEKRHKCPYSGCGKVYGKSSHLKAHYRVHTGERPFPCTWPDC
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB8 LKKFSRSDELTRHYRTHTGEKQFRCPLCEKRFMRSDHLTKHARRHTEFHPSMIKRSKKAL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS66 LKKFSRSDELTRHYRTHTGEKQFRCPLCEKRFMRSDHLTKHARRHTEFHPSMIKRSKKAL
              190       200       210       220       230       240

           
pF1KB8 ANAL
       ::::
CCDS66 ANAL
           

>>CCDS10025.1 KLF13 gene_id:51621|Hs108|chr15             (288 aa)
 initn: 717 init1: 574 opt: 608  Z-score: 414.1  bits: 84.3 E(32554): 9.5e-17
Smith-Waterman score: 714; 45.6% identity (66.9% similar) in 263 aa overlap (1-235:1-259)

               10        20          30           40        50     
pF1KB8 MSAAAYMDFVAAQCLVSISNRAAV--PEHGVA--PD-AERLRLPEREVTKEHGDPGDTWK
       :.::::.:  ::.::::.:.::.:  :..:    :. :     :    ..:. :     :
CCDS10 MAAAAYVDHFAAECLVSMSSRAVVHGPREGPESRPEGAAVAATPTLPRVEERRDG----K
               10        20        30        40        50          

          60        70        80                    90       100   
pF1KB8 DYCTLVTIAKSLLDLNKYRPIQTPS-----VCSDSLESP-------DEDMGSDSDVTTES
       :  .: ..:. : :::.  :  .:.     . . . ..:        :  .  .. .. .
CCDS10 DSASLFVVARILADLNQQAPAPAPAERREGAAARKARTPCRLPPPAPEPTSPGAEGAAAA
         60        70        80        90       100       110      

           110          120       130               140       150  
pF1KB8 GSSPSHS---PEERQDPGSAPSPLSLLHPGV---AAKGK-----HASEKRHKCPYSGCGK
         ::. :   ::   .:   :.: .  .::.   . .:.     .. ...::: :.:: :
CCDS10 PPSPAWSEPEPEAGLEPEREPGPAGSGEPGLRQRVRRGRSRADLESPQRKHKCHYAGCEK
        120       130       140       150       160       170      

            160       170       180       190       200       210  
pF1KB8 VYGKSSHLKAHYRVHTGERPFPCTWPDCLKKFSRSDELTRHYRTHTGEKQFRCPLCEKRF
       ::::::::::: :.::::::: :.: :: :::.:::::.::::::::::.: ::.:::::
CCDS10 VYGKSSHLKAHLRTHTGERPFACSWQDCNKKFARSDELARHYRTHTGEKKFSCPICEKRF
        180       190       200       210       220       230      

            220       230       240                        
pF1KB8 MRSDHLTKHARRHTEFHPSMIKRSKKALANAL                    
       :::::::::::::..:::.:..:                             
CCDS10 MRSDHLTKHARRHANFHPGMLQRRGGGSRTGSLSDYSRSDASSPTISPASSP
        240       250       260       270       280        

>>CCDS12075.1 KLF16 gene_id:83855|Hs108|chr19             (252 aa)
 initn: 734 init1: 495 opt: 547  Z-score: 375.8  bits: 77.0 E(32554): 1.3e-14
Smith-Waterman score: 571; 43.9% identity (61.5% similar) in 244 aa overlap (1-235:1-219)

                10        20              30         40        50  
pF1KB8 MSAA-AYMDFVAAQCLVSISNRAAV------PEHGVAPDAE-RLRLPEREVTKEHGDPGD
       :::: : .:. ::. :..::. :.:      :: :..: :   .:  .::...  : :: 
CCDS12 MSAAVACVDYFAADVLMAISSGAVVHRGRPGPE-GAGPAAGLDVRAARREAASP-GTPGP
               10        20        30         40        50         

             60        70         80        90       100       110 
pF1KB8 TWKDYCTLVTIAKSLLDLNKYRP-IQTPSVCSDSLESPDEDMGSDSDVTTESGSSPSHSP
                  :..        : . . :. .:   .:    :. : .   :.:: . ::
CCDS12 PPPP-----PAASGPGPGAAAAPHLLAASILADLRGGPGAAPGGASPA---SSSSAASSP
       60             70        80        90       100          110

             120       130       140       150       160       170 
pF1KB8 EERQDPGSAPSPLSLLHPGVAAKGKHASEKRHKCPYSGCGKVYGKSSHLKAHYRVHTGER
          . ::.:::               :. : :.::.  :.:.: ::::::.: :.:::::
CCDS12 SSGRAPGAAPS---------------AAAKSHRCPFPDCAKAYYKSSHLKSHLRTHTGER
              120                      130       140       150     

             180       190       200       210       220       230 
pF1KB8 PFPCTWPDCLKKFSRSDELTRHYRTHTGEKQFRCPLCEKRFMRSDHLTKHARRHTEFHPS
       :: : :  : :::.:::::.::.:::::::.: :::: ::: :::::.::::::  :::.
CCDS12 PFACDWQGCDKKFARSDELARHHRTHTGEKRFSCPLCSKRFTRSDHLAKHARRHPGFHPD
         160       170       180       190       200       210     

             240                            
pF1KB8 MIKRSKKALANAL                        
       ...:                                 
CCDS12 LLRRPGARSTSPSDSLPCSLAGSPAPSPAPSPAPAGL
         220       230       240       250  

>>CCDS5825.1 KLF14 gene_id:136259|Hs108|chr7              (323 aa)
 initn: 778 init1: 534 opt: 545  Z-score: 373.2  bits: 76.9 E(32554): 1.8e-14
Smith-Waterman score: 545; 60.7% identity (78.7% similar) in 122 aa overlap (118-238:172-291)

        90       100       110       120       130       140       
pF1KB8 SPDEDMGSDSDVTTESGSSPSHSPEERQDPGSAPSPLSLLHPGVAAKGKHASEKRHKCPY
                                     :..:.: .   :    ..   . :::.::.
CCDS58 ESSSDAPAVPSAPAAPGAPAASGGFSGGALGAGPAPAADQAP--RRRSVTPAAKRHQCPF
             150       160       170       180         190         

       150       160       170       180       190       200       
pF1KB8 SGCGKVYGKSSHLKAHYRVHTGERPFPCTWPDCLKKFSRSDELTRHYRTHTGEKQFRCPL
        :: :.: ::::::.: :.::::::: : : :: :::.:::::.::::::::::.: :::
CCDS58 PGCTKAYYKSSHLKSHQRTHTGERPFSCDWLDCDKKFTRSDELARHYRTHTGEKRFSCPL
     200       210       220       230       240       250         

       210       220       230        240                          
pF1KB8 CEKRFMRSDHLTKHARRHTEFHPSMIK-RSKKALANAL                      
       : :.: ::::::::::::  .::.::. :...                            
CCDS58 CPKQFSRSDHLTKHARRHPTYHPDMIEYRGRRRTPRIDPPLTSEVESSASGSGPGPAPSF
     260       270       280       290       300       310         

CCDS58 TTCL
     320   

>>CCDS47905.1 KLF10 gene_id:7071|Hs108|chr8               (469 aa)
 initn: 501 init1: 475 opt: 497  Z-score: 340.4  bits: 71.4 E(32554): 1.2e-12
Smith-Waterman score: 497; 47.8% identity (67.3% similar) in 159 aa overlap (75-225:284-440)

           50        60        70        80            90          
pF1KB8 KEHGDPGDTWKDYCTLVTIAKSLLDLNKYRPIQTPSVCSDSL----ESPDED-MGSDSDV
                                     : : :.::   .    . :    :    . 
CCDS47 GGVPPMPVICQMVPLPANNPVVTTVVPSTPPSQPPAVCPPVVFMGTQVPKGAVMFVVPQP
           260       270       280       290       300       310   

     100       110       120       130       140          150      
pF1KB8 TTESGSSPSHSPEERQDPGSAPSPLSLLHPGVAAKGKHASEKR---HKCPYSGCGKVYGK
       ...:.. :  ::.  .    ::.:   . :..:    . . .:   : : . ::::.: :
CCDS47 VVQSSKPPVVSPNGTRLSPIAPAP--GFSPSAAKVTPQIDSSRIRSHICSHPGCGKTYFK
           320       330         340       350       360       370 

        160       170       180       190       200       210      
pF1KB8 SSHLKAHYRVHTGERPFPCTWPDCLKKFSRSDELTRHYRTHTGEKQFRCPLCEKRFMRSD
       ::::::: :.::::.:: :.:  : ..:.:::::.:: :::::::.: ::.:..::::::
CCDS47 SSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTHTGEKKFACPMCDRRFMRSD
             380       390       400       410       420       430 

        220       230       240              
pF1KB8 HLTKHARRHTEFHPSMIKRSKKALANAL          
       :::::::::                             
CCDS47 HLTKHARRHLSAKKLPNWQMEVSKLNDIALPPTPAPTQ
             440       450       460         

>>CCDS6294.1 KLF10 gene_id:7071|Hs108|chr8                (480 aa)
 initn: 501 init1: 475 opt: 497  Z-score: 340.3  bits: 71.4 E(32554): 1.2e-12
Smith-Waterman score: 497; 47.8% identity (67.3% similar) in 159 aa overlap (75-225:295-451)

           50        60        70        80            90          
pF1KB8 KEHGDPGDTWKDYCTLVTIAKSLLDLNKYRPIQTPSVCSDSL----ESPDED-MGSDSDV
                                     : : :.::   .    . :    :    . 
CCDS62 GGVPPMPVICQMVPLPANNPVVTTVVPSTPPSQPPAVCPPVVFMGTQVPKGAVMFVVPQP
          270       280       290       300       310       320    

     100       110       120       130       140          150      
pF1KB8 TTESGSSPSHSPEERQDPGSAPSPLSLLHPGVAAKGKHASEKR---HKCPYSGCGKVYGK
       ...:.. :  ::.  .    ::.:   . :..:    . . .:   : : . ::::.: :
CCDS62 VVQSSKPPVVSPNGTRLSPIAPAP--GFSPSAAKVTPQIDSSRIRSHICSHPGCGKTYFK
          330       340         350       360       370       380  

        160       170       180       190       200       210      
pF1KB8 SSHLKAHYRVHTGERPFPCTWPDCLKKFSRSDELTRHYRTHTGEKQFRCPLCEKRFMRSD
       ::::::: :.::::.:: :.:  : ..:.:::::.:: :::::::.: ::.:..::::::
CCDS62 SSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTHTGEKKFACPMCDRRFMRSD
            390       400       410       420       430       440  

        220       230       240              
pF1KB8 HLTKHARRHTEFHPSMIKRSKKALANAL          
       :::::::::                             
CCDS62 HLTKHARRHLSAKKLPNWQMEVSKLNDIALPPTPAPTQ
            450       460       470       480

>>CCDS5372.1 SP8 gene_id:221833|Hs108|chr7                (490 aa)
 initn: 576 init1: 438 opt: 484  Z-score: 331.8  bits: 69.9 E(32554): 3.7e-12
Smith-Waterman score: 484; 46.0% identity (65.6% similar) in 163 aa overlap (70-226:280-439)

      40        50        60        70        80        90         
pF1KB8 EREVTKEHGDPGDTWKDYCTLVTIAKSLLDLNKYRPIQTPSVCSDSLESPDEDMGSD---
                                     .. ..:.  :.   ::  ::    :..   
CCDS53 GYNSDYSGLSHSAFSSGASSHLLSPAGQHLMDGFKPV-LPGSYPDSAPSPLAGAGGSMLS
     250       260       270       280        290       300        

        100       110       120       130       140          150   
pF1KB8 SDVTTESGSSPSHSPEERQDPGSAPSPLSLLHPGVAAKGKHASEKR---HKCPYSGCGKV
       .  ..  :.::  : .. .  ..   :       ..  :  :: .:   :.:   :::::
CCDS53 AGPSAPLGGSPRSSARRYSGRATCDCPNCQEAERLGPAG--ASLRRKGLHSCHIPGCGKV
      310       320       330       340         350       360      

           160       170       180       190       200       210   
pF1KB8 YGKSSHLKAHYRVHTGERPFPCTWPDCLKKFSRSDELTRHYRTHTGEKQFRCPLCEKRFM
       :::.:::::: : ::::::: :.:  : :.:.::::: :: :::::::.: ::.:.::::
CCDS53 YGKTSHLKAHLRWHTGERPFVCNWLFCGKRFTRSDELQRHLRTHTGEKRFACPVCNKRFM
        370       380       390       400       410       420      

           220       230       240                                 
pF1KB8 RSDHLTKHARRHTEFHPSMIKRSKKALANAL                             
       :::::.::.. :.                                               
CCDS53 RSDHLSKHVKTHSGGGGGGGSAGSGSGGKKGSDTDSEHSAAGSPPCHSPELLQPPEPGHR
        430       440       450       460       470       480      

>>CCDS43555.1 SP8 gene_id:221833|Hs108|chr7               (508 aa)
 initn: 576 init1: 438 opt: 484  Z-score: 331.7  bits: 69.9 E(32554): 3.7e-12
Smith-Waterman score: 484; 46.0% identity (65.6% similar) in 163 aa overlap (70-226:298-457)

      40        50        60        70        80        90         
pF1KB8 EREVTKEHGDPGDTWKDYCTLVTIAKSLLDLNKYRPIQTPSVCSDSLESPDEDMGSD---
                                     .. ..:.  :.   ::  ::    :..   
CCDS43 GYNSDYSGLSHSAFSSGASSHLLSPAGQHLMDGFKPV-LPGSYPDSAPSPLAGAGGSMLS
       270       280       290       300        310       320      

        100       110       120       130       140          150   
pF1KB8 SDVTTESGSSPSHSPEERQDPGSAPSPLSLLHPGVAAKGKHASEKR---HKCPYSGCGKV
       .  ..  :.::  : .. .  ..   :       ..  :  :: .:   :.:   :::::
CCDS43 AGPSAPLGGSPRSSARRYSGRATCDCPNCQEAERLGPAG--ASLRRKGLHSCHIPGCGKV
        330       340       350       360         370       380    

           160       170       180       190       200       210   
pF1KB8 YGKSSHLKAHYRVHTGERPFPCTWPDCLKKFSRSDELTRHYRTHTGEKQFRCPLCEKRFM
       :::.:::::: : ::::::: :.:  : :.:.::::: :: :::::::.: ::.:.::::
CCDS43 YGKTSHLKAHLRWHTGERPFVCNWLFCGKRFTRSDELQRHLRTHTGEKRFACPVCNKRFM
          390       400       410       420       430       440    

           220       230       240                                 
pF1KB8 RSDHLTKHARRHTEFHPSMIKRSKKALANAL                             
       :::::.::.. :.                                               
CCDS43 RSDHLSKHVKTHSGGGGGGGSAGSGSGGKKGSDTDSEHSAAGSPPCHSPELLQPPEPGHR
          450       460       470       480       490       500    

>>CCDS46453.1 SP9 gene_id:100131390|Hs108|chr2            (484 aa)
 initn: 525 init1: 435 opt: 471  Z-score: 323.6  bits: 68.3 E(32554): 1.1e-11
Smith-Waterman score: 471; 44.8% identity (66.3% similar) in 172 aa overlap (60-225:247-414)

      30        40        50        60        70        80         
pF1KB8 APDAERLRLPEREVTKEHGDPGDTWKDYCTLVTIAKSLLDLNKYRPIQTPSVCSDSLESP
                                     :.. .. ::  . ..:.  ::  :::  . 
CCDS46 LGTYNPDFSSLTHSAFSSTGLGSSAAAASHLLSTSQHLLAQDGFKPV-LPSY-SDSSAAV
        220       230       240       250       260         270    

      90          100       110       120       130       140      
pF1KB8 DEDMGS---DSDVTTESGSSPSHSPEERQDPGSAPSPLSLLHPGVAAKGKHASEKR---H
           .:   .. ... .:.: ..: .. .  ..   :       ..  :  :: .:   :
CCDS46 AAAAASAMISGAAAAAAGGSSARSARRYSGRATCDCPNCQEAERLGPAG--ASLRRKGLH
          280       290       300       310       320         330  

           150       160       170       180       190       200   
pF1KB8 KCPYSGCGKVYGKSSHLKAHYRVHTGERPFPCTWPDCLKKFSRSDELTRHYRTHTGEKQF
       .:   ::::::::.:::::: : ::::::: :.:  : :.:.::::: :: :::::::.:
CCDS46 SCHIPGCGKVYGKTSHLKAHLRWHTGERPFVCNWLFCGKRFTRSDELQRHLRTHTGEKRF
            340       350       360       370       380       390  

           210       220       230       240                       
pF1KB8 RCPLCEKRFMRSDHLTKHARRHTEFHPSMIKRSKKALANAL                   
        ::.:.:::::::::.:: . :                                      
CCDS46 ACPVCNKRFMRSDHLSKHIKTHNGGGGGKKGSDSDTDASNLETPRSESPDLILHDSGVSA
            400       410       420       430       440       450  

>>CCDS44898.1 SP1 gene_id:6667|Hs108|chr12                (778 aa)
 initn: 559 init1: 437 opt: 473  Z-score: 322.3  bits: 68.8 E(32554): 1.2e-11
Smith-Waterman score: 473; 50.4% identity (68.6% similar) in 137 aa overlap (91-225:566-701)

               70        80        90       100       110          
pF1KB8 VTIAKSLLDLNKYRPIQTPSVCSDSLESPDEDMGSDSDVTTESGSSPSHSPE--ERQDPG
                                     . . .:.    :. .::. .:.  .:    
CCDS44 QVHPIQGLPLAIANAPGDHGAQLGLHGAGGDGIHDDTAGGEEGENSPDAQPQAGRRTRRE
         540       550       560       570       580       590     

      120       130       140       150       160       170        
pF1KB8 SAPSPLSLLHPGVAAKGKHASEKRHKCPYSGCGKVYGKSSHLKAHYRVHTGERPFPCTWP
       .   :      :  ..:  ...:.: :  .::::::::.:::.:: : ::::::: ::: 
CCDS44 ACTCPYCKDSEG-RGSGDPGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGERPFMCTWS
         600        610       620       630       640       650    

      180       190       200       210       220       230        
pF1KB8 DCLKKFSRSDELTRHYRTHTGEKQFRCPLCEKRFMRSDHLTKHARRHTEFHPSMIKRSKK
        : :.:.::::: :: :::::::.: :: : :::::::::.:: . :             
CCDS44 YCGKRFTRSDELQRHKRTHTGEKKFACPECPKRFMRSDHLSKHIKTHQNKKGGPGVALSV
          660       670       680       690       700       710    

      240                                                          
pF1KB8 ALANAL                                                      
                                                                   
CCDS44 GTLPLDSGAGSEGSGTATPSALITTNMVAMEAICPEGIARLANSGINVMQVADLQSINIS
          720       730       740       750       760       770    




244 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 16:27:17 2016 done: Fri Nov  4 16:27:17 2016
 Total Scan time:  2.400 Total Display time:  0.020

Function used was FASTA [36.3.4 Apr, 2011]
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