Result of FASTA (omim) for pF1KB8895
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB8895, 223 aa
  1>>>pF1KB8895 223 - 223 aa - 223 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.9258+/-0.000373; mu= 10.4345+/- 0.023
 mean_var=69.8173+/-13.328, 0's: 0 Z-trim(113.4): 102  B-trim: 23 in 1/54
 Lambda= 0.153494
 statistics sampled from 22587 (22692) to 22587 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.641), E-opt: 0.2 (0.266), width:  16
 Scan time:  6.000

The best scores are:                                      opt bits E(85289)
NP_036460 (OMIM: 602634) dnaJ homolog subfamily B  ( 223) 1507 342.7   3e-94
NP_001304028 (OMIM: 611327) dnaJ homolog subfamily ( 337)  343 84.9 1.7e-16
NP_008965 (OMIM: 611327) dnaJ homolog subfamily B  ( 337)  343 84.9 1.7e-16
NP_005485 (OMIM: 603511,611332) dnaJ homolog subfa ( 241)  340 84.2   2e-16
XP_006715886 (OMIM: 603511,611332) PREDICTED: dnaJ ( 257)  340 84.2 2.1e-16
NP_490647 (OMIM: 603511,611332) dnaJ homolog subfa ( 326)  340 84.3 2.6e-16
XP_005249572 (OMIM: 603511,611332) PREDICTED: dnaJ ( 334)  340 84.3 2.7e-16
XP_011514006 (OMIM: 603511,611332) PREDICTED: dnaJ ( 334)  340 84.3 2.7e-16
XP_005249573 (OMIM: 603511,611332) PREDICTED: dnaJ ( 334)  340 84.3 2.7e-16
XP_006716814 (OMIM: 611328) PREDICTED: dnaJ homolo ( 348)  337 83.6 4.4e-16
XP_005251485 (OMIM: 611328) PREDICTED: dnaJ homolo ( 348)  337 83.6 4.4e-16
NP_036398 (OMIM: 611328) dnaJ homolog subfamily B  ( 348)  337 83.6 4.4e-16
NP_001128477 (OMIM: 611328) dnaJ homolog subfamily ( 420)  337 83.6 5.3e-16
XP_011516144 (OMIM: 611328) PREDICTED: dnaJ homolo ( 420)  337 83.6 5.3e-16
NP_001128476 (OMIM: 611328) dnaJ homolog subfamily ( 462)  337 83.7 5.7e-16
NP_057390 (OMIM: 611341) dnaJ homolog subfamily B  ( 358)  320 79.9 6.2e-15
XP_006713582 (OMIM: 611337) PREDICTED: dnaJ homolo ( 232)  312 78.0 1.4e-14
NP_699161 (OMIM: 611337) dnaJ homolog subfamily B  ( 232)  312 78.0 1.4e-14
XP_016867122 (OMIM: 603511,611332) PREDICTED: dnaJ ( 211)  307 76.9 2.8e-14
NP_006136 (OMIM: 604572) dnaJ homolog subfamily B  ( 340)  308 77.2 3.7e-14
XP_005269989 (OMIM: 608376) PREDICTED: dnaJ homolo ( 409)  304 76.3 8.1e-14
NP_001002762 (OMIM: 608376) dnaJ homolog subfamily ( 409)  304 76.3 8.1e-14
NP_060096 (OMIM: 608376) dnaJ homolog subfamily B  ( 409)  304 76.3 8.1e-14
XP_005269988 (OMIM: 608376) PREDICTED: dnaJ homolo ( 411)  304 76.3 8.2e-14
NP_001128582 (OMIM: 608382) dnaJ homolog subfamily ( 453)  304 76.4 8.9e-14
NP_005138 (OMIM: 608382) dnaJ homolog subfamily A  ( 480)  304 76.4 9.4e-14
NP_001034639 (OMIM: 604139,614881,617017) dnaJ hom ( 277)  297 74.7 1.7e-13
NP_006727 (OMIM: 604139,614881,617017) dnaJ homolo ( 324)  297 74.8 1.9e-13
NP_001304032 (OMIM: 611327) dnaJ homolog subfamily (  77)  282 71.2 5.2e-13
NP_005871 (OMIM: 611322) dnaJ homolog subfamily A  ( 412)  286 72.4 1.3e-12
NP_660157 (OMIM: 611336) dnaJ homolog subfamily B  ( 309)  278 70.5 3.4e-12
NP_001530 (OMIM: 602837) dnaJ homolog subfamily A  ( 397)  270 68.8 1.5e-11
NP_001258510 (OMIM: 607987) dnaJ homolog subfamily ( 747)  266 68.0 4.8e-11
NP_061854 (OMIM: 607987) dnaJ homolog subfamily C  ( 793)  266 68.0 5.1e-11
NP_705842 (OMIM: 610263,617091) dnaJ homolog subfa ( 316)  233 60.6 3.5e-09
XP_016876164 (OMIM: 601184,616192) PREDICTED: dnaJ ( 383)  225 58.8 1.4e-08
XP_016876163 (OMIM: 601184,616192) PREDICTED: dnaJ ( 421)  225 58.8 1.5e-08
XP_011519407 (OMIM: 601184,616192) PREDICTED: dnaJ ( 450)  225 58.9 1.6e-08
NP_079495 (OMIM: 611203) dnaJ homolog subfamily C  ( 198)  220 57.6 1.7e-08
XP_011527351 (OMIM: 611203) PREDICTED: dnaJ homolo ( 198)  220 57.6 1.7e-08
XP_011527350 (OMIM: 611203) PREDICTED: dnaJ homolo ( 198)  220 57.6 1.7e-08
NP_006251 (OMIM: 601184,616192) dnaJ homolog subfa ( 504)  225 58.9 1.8e-08
XP_011519406 (OMIM: 601184,616192) PREDICTED: dnaJ ( 533)  225 58.9 1.9e-08
XP_011515922 (OMIM: 613945) PREDICTED: dnaJ homolo ( 180)  209 55.2 8.3e-08
NP_149096 (OMIM: 613945) dnaJ homolog subfamily C  ( 199)  209 55.2 9.1e-08
XP_011515920 (OMIM: 613945) PREDICTED: dnaJ homolo ( 199)  209 55.2 9.1e-08
XP_005274041 (OMIM: 610263,617091) PREDICTED: dnaJ ( 262)  210 55.5   1e-07
XP_016872025 (OMIM: 611207) PREDICTED: dnaJ homolo ( 361)  211 55.7 1.2e-07
XP_011517916 (OMIM: 611207) PREDICTED: dnaJ homolo ( 394)  211 55.7 1.2e-07
NP_071760 (OMIM: 611207) dnaJ homolog subfamily C  ( 554)  211 55.8 1.7e-07


>>NP_036460 (OMIM: 602634) dnaJ homolog subfamily B memb  (223 aa)
 initn: 1507 init1: 1507 opt: 1507  Z-score: 1813.1  bits: 342.7 E(85289): 3e-94
Smith-Waterman score: 1507; 100.0% identity (100.0% similar) in 223 aa overlap (1-223:1-223)

               10        20        30        40        50        60
pF1KB8 MATPQSIFIFAICILMITELILASKSYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 MATPQSIFIFAICILMITELILASKSYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKS
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 PDAEAKFREIAEAYETLSDANRRKEYDTLGHSAFTSGKGQRGSGSSFEQSFNFNFDDLFK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 PDAEAKFREIAEAYETLSDANRRKEYDTLGHSAFTSGKGQRGSGSSFEQSFNFNFDDLFK
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB8 DFGFFGQNQNTGSKKRFENHFQTRQDGGSSRQRHHFQEFSFGGGLFDDMFEDMEKMFSFS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_036 DFGFFGQNQNTGSKKRFENHFQTRQDGGSSRQRHHFQEFSFGGGLFDDMFEDMEKMFSFS
              130       140       150       160       170       180

              190       200       210       220   
pF1KB8 GFDSTNQHTVQTENRFHGSSKHCRTVTQRRGNMVTTYTDCSGQ
       :::::::::::::::::::::::::::::::::::::::::::
NP_036 GFDSTNQHTVQTENRFHGSSKHCRTVTQRRGNMVTTYTDCSGQ
              190       200       210       220   

>>NP_001304028 (OMIM: 611327) dnaJ homolog subfamily B m  (337 aa)
 initn: 324 init1: 296 opt: 343  Z-score: 417.1  bits: 84.9 E(85289): 1.7e-16
Smith-Waterman score: 343; 43.4% identity (69.9% similar) in 143 aa overlap (25-161:3-137)

               10        20        30        40        50        60
pF1KB8 MATPQSIFIFAICILMITELILASKSYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKS
                               :.:: :::. :.::...::::..: :.:.:::::::
NP_001                       MGKDYYCILGIEKGASDEDIKKAYRKQALKFHPDKNKS
                                     10        20        30        

               70        80        90       100        110         
pF1KB8 PDAEAKFREIAEAYETLSDANRRKEYDTLGHSAFTSGKGQR-GSGSSFEQSFNFNFDDLF
       :.:: ::.:.:::::.::: ..:. :: .:. .. .: :   :.:..:. .:. .    :
NP_001 PQAEEKFKEVAEAYEVLSDPKKREIYDQFGEEGLKGGAGGTDGQGGTFRYTFHGDPHATF
       40        50        60        70        80        90        

     120       130       140       150            160       170    
pF1KB8 KDFGFFGQNQNTGSKKRFENHFQTRQDGGSSRQRHH-----FQEFSFGGGLFDDMFEDME
          .:::     ::.  ::  :  :. :: . .. .     :. :.:             
NP_001 A--AFFG-----GSNP-FEIFFGRRMGGGRDSEEMEIDGDPFSAFGFSMNGYPRDRNSVG
        100             110       120       130       140       150

          180       190       200       210       220              
pF1KB8 KMFSFSGFDSTNQHTVQTENRFHGSSKHCRTVTQRRGNMVTTYTDCSGQ           
                                                                   
NP_001 PSRLKQDPPVIHELRVSLEEIYSGCTKRMKISRKRLNADGRSYRSEDKILTIEIKKGWKE
              160       170       180       190       200       210

>>NP_008965 (OMIM: 611327) dnaJ homolog subfamily B memb  (337 aa)
 initn: 324 init1: 296 opt: 343  Z-score: 417.1  bits: 84.9 E(85289): 1.7e-16
Smith-Waterman score: 343; 43.4% identity (69.9% similar) in 143 aa overlap (25-161:3-137)

               10        20        30        40        50        60
pF1KB8 MATPQSIFIFAICILMITELILASKSYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKS
                               :.:: :::. :.::...::::..: :.:.:::::::
NP_008                       MGKDYYCILGIEKGASDEDIKKAYRKQALKFHPDKNKS
                                     10        20        30        

               70        80        90       100        110         
pF1KB8 PDAEAKFREIAEAYETLSDANRRKEYDTLGHSAFTSGKGQR-GSGSSFEQSFNFNFDDLF
       :.:: ::.:.:::::.::: ..:. :: .:. .. .: :   :.:..:. .:. .    :
NP_008 PQAEEKFKEVAEAYEVLSDPKKREIYDQFGEEGLKGGAGGTDGQGGTFRYTFHGDPHATF
       40        50        60        70        80        90        

     120       130       140       150            160       170    
pF1KB8 KDFGFFGQNQNTGSKKRFENHFQTRQDGGSSRQRHH-----FQEFSFGGGLFDDMFEDME
          .:::     ::.  ::  :  :. :: . .. .     :. :.:             
NP_008 A--AFFG-----GSNP-FEIFFGRRMGGGRDSEEMEIDGDPFSAFGFSMNGYPRDRNSVG
        100             110       120       130       140       150

          180       190       200       210       220              
pF1KB8 KMFSFSGFDSTNQHTVQTENRFHGSSKHCRTVTQRRGNMVTTYTDCSGQ           
                                                                   
NP_008 PSRLKQDPPVIHELRVSLEEIYSGCTKRMKISRKRLNADGRSYRSEDKILTIEIKKGWKE
              160       170       180       190       200       210

>>NP_005485 (OMIM: 603511,611332) dnaJ homolog subfamily  (241 aa)
 initn: 180 init1: 150 opt: 340  Z-score: 415.8  bits: 84.2 E(85289): 2e-16
Smith-Waterman score: 344; 36.8% identity (65.7% similar) in 204 aa overlap (27-210:4-202)

               10        20        30        40        50          
pF1KB8 MATPQSIFIFAICILMITELILASKSYYDILGVPKSASERQIKKAFHKLAMKYHPDKN--
                                 ::..::: . :: ..::::..:::.:.:::::  
NP_005                        MVDYYEVLGVQRHASPEDIKKAYRKLALKWHPDKNPE
                                      10        20        30       

       60        70        80        90       100       110        
pF1KB8 KSPDAEAKFREIAEAYETLSDANRRKEYDTLGHSAFTSGKGQRGSGSSFEQSFNFNF---
       .. .:: ::...:::::.::::..:  ::  :. ....: :   .:: :.. :.:.:   
NP_005 NKEEAERKFKQVAEAYEVLSDAKKRDIYDKYGKEGLNGGGG---GGSHFDSPFEFGFTFR
        40        50        60        70           80        90    

           120       130         140       150          160        
pF1KB8 --DDLFKDFGFFGQNQNTGS--KKRFENHFQTRQDGGSSRQR---HHFQEFS----FGGG
         ::.:..: : :..  . .  .  ::. : .:.   .::.:     :. ::    ::.:
NP_005 NPDDVFREF-FGGRDPFSFDFFEDPFEDFFGNRRGPRGSRSRGTGSFFSAFSGFPSFGSG
          100        110       120       130       140       150   

            170         180       190       200       210       220
pF1KB8 L--FDDMFEDMEKMF--SFSGFDSTNQHTVQTENRFHGSSKHCRTVTQRRGNMVTTYTDC
       .  ::  : .. ..   ....:.::.       : :.. :   . :. :.          
NP_005 FSSFDTGFTSFGSLGHGGLTSFSSTSFGGSGMGN-FKSISTSTKMVNGRKITTKRIVENG
           160       170       180        190       200       210  

                                    
pF1KB8 SGQ                          
                                    
NP_005 QERVEVEEDGQLKSLTINGKEQLLRLDNK
            220       230       240 

>>XP_006715886 (OMIM: 603511,611332) PREDICTED: dnaJ hom  (257 aa)
 initn: 180 init1: 150 opt: 340  Z-score: 415.4  bits: 84.2 E(85289): 2.1e-16
Smith-Waterman score: 344; 36.8% identity (65.7% similar) in 204 aa overlap (27-210:4-202)

               10        20        30        40        50          
pF1KB8 MATPQSIFIFAICILMITELILASKSYYDILGVPKSASERQIKKAFHKLAMKYHPDKN--
                                 ::..::: . :: ..::::..:::.:.:::::  
XP_006                        MVDYYEVLGVQRHASPEDIKKAYRKLALKWHPDKNPE
                                      10        20        30       

       60        70        80        90       100       110        
pF1KB8 KSPDAEAKFREIAEAYETLSDANRRKEYDTLGHSAFTSGKGQRGSGSSFEQSFNFNF---
       .. .:: ::...:::::.::::..:  ::  :. ....: :   .:: :.. :.:.:   
XP_006 NKEEAERKFKQVAEAYEVLSDAKKRDIYDKYGKEGLNGGGG---GGSHFDSPFEFGFTFR
        40        50        60        70           80        90    

           120       130         140       150          160        
pF1KB8 --DDLFKDFGFFGQNQNTGS--KKRFENHFQTRQDGGSSRQR---HHFQEFS----FGGG
         ::.:..: : :..  . .  .  ::. : .:.   .::.:     :. ::    ::.:
XP_006 NPDDVFREF-FGGRDPFSFDFFEDPFEDFFGNRRGPRGSRSRGTGSFFSAFSGFPSFGSG
          100        110       120       130       140       150   

            170         180       190       200       210       220
pF1KB8 L--FDDMFEDMEKMF--SFSGFDSTNQHTVQTENRFHGSSKHCRTVTQRRGNMVTTYTDC
       .  ::  : .. ..   ....:.::.       : :.. :   . :. :.          
XP_006 FSSFDTGFTSFGSLGHGGLTSFSSTSFGGSGMGN-FKSISTSTKMVNGRKITTKRIVENG
           160       170       180        190       200       210  

                                                    
pF1KB8 SGQ                                          
                                                    
XP_006 QERVEVEEDGQLKSLTINGLKEGGKRKKQKQREESKKKKSTKGNH
            220       230       240       250       

>>NP_490647 (OMIM: 603511,611332) dnaJ homolog subfamily  (326 aa)
 initn: 180 init1: 150 opt: 340  Z-score: 413.7  bits: 84.3 E(85289): 2.6e-16
Smith-Waterman score: 344; 36.8% identity (65.7% similar) in 204 aa overlap (27-210:4-202)

               10        20        30        40        50          
pF1KB8 MATPQSIFIFAICILMITELILASKSYYDILGVPKSASERQIKKAFHKLAMKYHPDKN--
                                 ::..::: . :: ..::::..:::.:.:::::  
NP_490                        MVDYYEVLGVQRHASPEDIKKAYRKLALKWHPDKNPE
                                      10        20        30       

       60        70        80        90       100       110        
pF1KB8 KSPDAEAKFREIAEAYETLSDANRRKEYDTLGHSAFTSGKGQRGSGSSFEQSFNFNF---
       .. .:: ::...:::::.::::..:  ::  :. ....: :   .:: :.. :.:.:   
NP_490 NKEEAERKFKQVAEAYEVLSDAKKRDIYDKYGKEGLNGGGG---GGSHFDSPFEFGFTFR
        40        50        60        70           80        90    

           120       130         140       150          160        
pF1KB8 --DDLFKDFGFFGQNQNTGS--KKRFENHFQTRQDGGSSRQR---HHFQEFS----FGGG
         ::.:..: : :..  . .  .  ::. : .:.   .::.:     :. ::    ::.:
NP_490 NPDDVFREF-FGGRDPFSFDFFEDPFEDFFGNRRGPRGSRSRGTGSFFSAFSGFPSFGSG
          100        110       120       130       140       150   

            170         180       190       200       210       220
pF1KB8 L--FDDMFEDMEKMF--SFSGFDSTNQHTVQTENRFHGSSKHCRTVTQRRGNMVTTYTDC
       .  ::  : .. ..   ....:.::.       : :.. :   . :. :.          
NP_490 FSSFDTGFTSFGSLGHGGLTSFSSTSFGGSGMGN-FKSISTSTKMVNGRKITTKRIVENG
           160       170       180        190       200       210  

                                                                   
pF1KB8 SGQ                                                         
                                                                   
NP_490 QERVEVEEDGQLKSLTINGVADDDALAEERMRRGQNALPAQPAGLRPPKPPRPASLLRHA
            220       230       240       250       260       270  

>>XP_005249572 (OMIM: 603511,611332) PREDICTED: dnaJ hom  (334 aa)
 initn: 180 init1: 150 opt: 340  Z-score: 413.5  bits: 84.3 E(85289): 2.7e-16
Smith-Waterman score: 344; 36.8% identity (65.7% similar) in 204 aa overlap (27-210:4-202)

               10        20        30        40        50          
pF1KB8 MATPQSIFIFAICILMITELILASKSYYDILGVPKSASERQIKKAFHKLAMKYHPDKN--
                                 ::..::: . :: ..::::..:::.:.:::::  
XP_005                        MVDYYEVLGVQRHASPEDIKKAYRKLALKWHPDKNPE
                                      10        20        30       

       60        70        80        90       100       110        
pF1KB8 KSPDAEAKFREIAEAYETLSDANRRKEYDTLGHSAFTSGKGQRGSGSSFEQSFNFNF---
       .. .:: ::...:::::.::::..:  ::  :. ....: :   .:: :.. :.:.:   
XP_005 NKEEAERKFKQVAEAYEVLSDAKKRDIYDKYGKEGLNGGGG---GGSHFDSPFEFGFTFR
        40        50        60        70           80        90    

           120       130         140       150          160        
pF1KB8 --DDLFKDFGFFGQNQNTGS--KKRFENHFQTRQDGGSSRQR---HHFQEFS----FGGG
         ::.:..: : :..  . .  .  ::. : .:.   .::.:     :. ::    ::.:
XP_005 NPDDVFREF-FGGRDPFSFDFFEDPFEDFFGNRRGPRGSRSRGTGSFFSAFSGFPSFGSG
          100        110       120       130       140       150   

            170         180       190       200       210       220
pF1KB8 L--FDDMFEDMEKMF--SFSGFDSTNQHTVQTENRFHGSSKHCRTVTQRRGNMVTTYTDC
       .  ::  : .. ..   ....:.::.       : :.. :   . :. :.          
XP_005 FSSFDTGFTSFGSLGHGGLTSFSSTSFGGSGMGN-FKSISTSTKMVNGRKITTKRIVENG
           160       170       180        190       200       210  

                                                                   
pF1KB8 SGQ                                                         
                                                                   
XP_005 QERVEVEEDGQLKSLTINGVADDDALAEERMRRGQNALPAQPAGLRPPKPPRPASLLRHA
            220       230       240       250       260       270  

>>XP_011514006 (OMIM: 603511,611332) PREDICTED: dnaJ hom  (334 aa)
 initn: 180 init1: 150 opt: 340  Z-score: 413.5  bits: 84.3 E(85289): 2.7e-16
Smith-Waterman score: 344; 36.8% identity (65.7% similar) in 204 aa overlap (27-210:4-202)

               10        20        30        40        50          
pF1KB8 MATPQSIFIFAICILMITELILASKSYYDILGVPKSASERQIKKAFHKLAMKYHPDKN--
                                 ::..::: . :: ..::::..:::.:.:::::  
XP_011                        MVDYYEVLGVQRHASPEDIKKAYRKLALKWHPDKNPE
                                      10        20        30       

       60        70        80        90       100       110        
pF1KB8 KSPDAEAKFREIAEAYETLSDANRRKEYDTLGHSAFTSGKGQRGSGSSFEQSFNFNF---
       .. .:: ::...:::::.::::..:  ::  :. ....: :   .:: :.. :.:.:   
XP_011 NKEEAERKFKQVAEAYEVLSDAKKRDIYDKYGKEGLNGGGG---GGSHFDSPFEFGFTFR
        40        50        60        70           80        90    

           120       130         140       150          160        
pF1KB8 --DDLFKDFGFFGQNQNTGS--KKRFENHFQTRQDGGSSRQR---HHFQEFS----FGGG
         ::.:..: : :..  . .  .  ::. : .:.   .::.:     :. ::    ::.:
XP_011 NPDDVFREF-FGGRDPFSFDFFEDPFEDFFGNRRGPRGSRSRGTGSFFSAFSGFPSFGSG
          100        110       120       130       140       150   

            170         180       190       200       210       220
pF1KB8 L--FDDMFEDMEKMF--SFSGFDSTNQHTVQTENRFHGSSKHCRTVTQRRGNMVTTYTDC
       .  ::  : .. ..   ....:.::.       : :.. :   . :. :.          
XP_011 FSSFDTGFTSFGSLGHGGLTSFSSTSFGGSGMGN-FKSISTSTKMVNGRKITTKRIVENG
           160       170       180        190       200       210  

                                                                   
pF1KB8 SGQ                                                         
                                                                   
XP_011 QERVEVEEDGQLKSLTINGVADDDALAEERMRRGQNALPAQPAGLRPPKPPRPASLLRHA
            220       230       240       250       260       270  

>>XP_005249573 (OMIM: 603511,611332) PREDICTED: dnaJ hom  (334 aa)
 initn: 180 init1: 150 opt: 340  Z-score: 413.5  bits: 84.3 E(85289): 2.7e-16
Smith-Waterman score: 344; 36.8% identity (65.7% similar) in 204 aa overlap (27-210:4-202)

               10        20        30        40        50          
pF1KB8 MATPQSIFIFAICILMITELILASKSYYDILGVPKSASERQIKKAFHKLAMKYHPDKN--
                                 ::..::: . :: ..::::..:::.:.:::::  
XP_005                        MVDYYEVLGVQRHASPEDIKKAYRKLALKWHPDKNPE
                                      10        20        30       

       60        70        80        90       100       110        
pF1KB8 KSPDAEAKFREIAEAYETLSDANRRKEYDTLGHSAFTSGKGQRGSGSSFEQSFNFNF---
       .. .:: ::...:::::.::::..:  ::  :. ....: :   .:: :.. :.:.:   
XP_005 NKEEAERKFKQVAEAYEVLSDAKKRDIYDKYGKEGLNGGGG---GGSHFDSPFEFGFTFR
        40        50        60        70           80        90    

           120       130         140       150          160        
pF1KB8 --DDLFKDFGFFGQNQNTGS--KKRFENHFQTRQDGGSSRQR---HHFQEFS----FGGG
         ::.:..: : :..  . .  .  ::. : .:.   .::.:     :. ::    ::.:
XP_005 NPDDVFREF-FGGRDPFSFDFFEDPFEDFFGNRRGPRGSRSRGTGSFFSAFSGFPSFGSG
          100        110       120       130       140       150   

            170         180       190       200       210       220
pF1KB8 L--FDDMFEDMEKMF--SFSGFDSTNQHTVQTENRFHGSSKHCRTVTQRRGNMVTTYTDC
       .  ::  : .. ..   ....:.::.       : :.. :   . :. :.          
XP_005 FSSFDTGFTSFGSLGHGGLTSFSSTSFGGSGMGN-FKSISTSTKMVNGRKITTKRIVENG
           160       170       180        190       200       210  

                                                                   
pF1KB8 SGQ                                                         
                                                                   
XP_005 QERVEVEEDGQLKSLTINGVADDDALAEERMRRGQNALPAQPAGLRPPKPPRPASLLRHA
            220       230       240       250       260       270  

>>XP_006716814 (OMIM: 611328) PREDICTED: dnaJ homolog su  (348 aa)
 initn: 370 init1: 308 opt: 337  Z-score: 409.7  bits: 83.6 E(85289): 4.4e-16
Smith-Waterman score: 353; 37.7% identity (63.3% similar) in 199 aa overlap (25-212:3-198)

               10        20        30        40        50        60
pF1KB8 MATPQSIFIFAICILMITELILASKSYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKS
                               :.:: :::.:..:.: .::::..:.:.:::::::: 
XP_006                       MGKDYYKILGIPSGANEDEIKKAYRKMALKYHPDKNKE
                                     10        20        30        

               70        80        90       100        110         
pF1KB8 PDAEAKFREIAEAYETLSDANRRKEYDTLGHSAFTSGKGQRGSGS-SFEQSFNFNFDDLF
       :.:: ::.::::::..::: ..:  ::  :. .. .: :  :..: ::. .:. .    :
XP_006 PNAEEKFKEIAEAYDVLSDPKKRGLYDQYGEEGLKTGGGTSGGSSGSFHYTFHGDPHATF
       40        50        60        70        80        90        

     120            130       140       150       160         170  
pF1KB8 KDFGFFGQNQ-----NTGSKKRFENHFQTRQDGGSSRQRHHFQEFS-FG-GGLFDDMFED
        .: : :.:       .. . :  . :.  .:   ....  :  :. :: .::     . 
XP_006 ASF-FGGSNPFDIFFASSRSTRPFSGFDP-DDMDVDEDEDPFGAFGRFGFNGLSRGPRRA
      100        110       120        130       140       150      

            180          190       200       210       220         
pF1KB8 MEKMFSFSGF-DSTNQHT--VQTENRFHGSSKHCRTVTQRRGNMVTTYTDCSGQ      
        : ..      :    :   :. :. .:::.:. . .:.:: :                 
XP_006 PEPLYPRRKVQDPPVVHELRVSLEEIYHGSTKRMK-ITRRRLNPDGRTVRTEDKILHIVI
        160       170       180       190        200       210     

XP_006 KRGWKEGTKITFPKEGDATPDNIPADIVFVLKDKPHAHFRRDGTNVLYSALISLKEALCG
         220       230       240       250       260       270     




223 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 16:24:07 2016 done: Fri Nov  4 16:24:08 2016
 Total Scan time:  6.000 Total Display time: -0.020

Function used was FASTA [36.3.4 Apr, 2011]
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