GENSCAN 1.0	Date run:  4-Nov-116	Time: 16:20:07

Sequence gi568815575r:72201726_72402869 : 201144 bp : 44.27% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.03 PlyA -    166    161    6                               1.05
 1.02 Term -   6973   3289 3685  0  1  110   54  1573 0.992 141.54
 1.01 Init -  11917  11814  104  1  2   89  101    67 0.968   7.81
 1.00 Prom -  19036  18997   40                              -6.26

 2.00 Prom +  25215  25254   40                              -5.56
 2.01 Init +  33224  33262   39  1  0   95   71    64 0.547   5.59
 2.02 Term +  39674  39778  105  1  0   90   38   104 0.694   4.01
 2.03 PlyA +  41595  41600    6                               1.05

 3.09 PlyA -  42346  42341    6                               1.05
 3.08 Term -  60785  60679  107  0  2   33   49   150 0.290   4.17
 3.07 Intr -  71047  70954   94  1  1  126   23    57 0.385   2.54
 3.06 Intr -  71664  71507  158  1  2   72  115   160 0.995  16.83
 3.05 Intr -  72247  72076  172  1  1   60  107   220 0.901  20.62
 3.04 Intr -  73425  73328   98  1  2   44  113   130 0.920  10.83
 3.03 Intr -  73999  73819  181  1  1   70   86    78 0.928   5.24
 3.02 Intr -  74509  74432   78  1  0   42   78    59 0.491   0.05
 3.01 Init -  75470  75468    3  2  0   91  103     0 0.670   1.80
 3.00 Prom -  82398  82359   40                              -3.46

 4.07 PlyA -  83941  83936    6                               1.05
 4.06 Term - 100519  99998  522  1  0  113   38   393 0.999  31.08
 4.05 Intr - 101209 101085  125  2  2  109   76    61 0.986   7.30
 4.04 Intr - 103475 103322  154  2  1   97   37    78 0.663   3.25
 4.03 Intr - 104919 104752  168  0  0   32   99    81 0.309   3.74
 4.02 Intr - 116097 115885  213  0  0   49   52   127 0.059   4.11
 4.01 Init - 117988 117947   42  1  0  104   70    30 0.057   3.22
 4.00 Prom - 120750 120711   40                              -7.16

 5.04 PlyA - 121419 121414    6                               1.05
 5.03 Term - 123386 123223  164  0  2   70   50   136 0.978   6.10
 5.02 Intr - 150113 150008  106  2  1  104  105   127 0.926  15.79
 5.01 Init - 174385 174383    3  1  0  108   81     0 0.349   1.30

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815575r:72201726_72402869|GENSCAN_predicted_peptide_1|1262_aa
MGALLYQKRSGHPAISGGVEVSDGSATVANSSGGRYVKEAKEATKNGDLEEAFKLFNLAK
DIFPNEKVLSRIQKIQEALEELAEQGDDEFTDVCNSGLLLYRELHNQLFEHQKEGIAFLY
SLYRDGRKGGILADDMGLGKTVQIIAFLSGMFDASLVNHVLLIMPTNLINTWVKEFIKWT
PGMRVKTFHGPSKDERTRNLNRIQQRNGVIITTYQMLINNWQQLSSFRGQEFVWDYVILD
EAHKIKTSSTKSAICARAIPASNRLLLTGTPIQNNLQELWSLFDFACQGSLLGTLKTFKM
EYENPITRAREKDATPGEKALGFKISENLMAIIKPYFLRRTKEDVQKKKSSNPEARLNEK
NPDVDAICEMPSLSRKNDLIIWIRLVPLQEEIYRKFVSLDHIKELLMETRSPLAELGVLK
KLCDHPRLLSARACCLLNLGTFSAQDGNEGEDSPDVDHIDQVTDDTLMEESGKMIFLMDL
LKRLRDEGHQTLVFSQSRQILNIIERLLKNRHFKTLRIDGTVTHLLEREKRINLFQQNKD
YSVFLLTTQVGGVGLTLTAATRVVIFDPSWNPATDAQAVDRVYRIGQKENVVVYRLITCG
TVEEKIYRRQVFKDSLIRQTTGEKKNPFRYFSKQELRELFTIEDLQNSVTQLQLQSLHAA
QRKSDIKLDEHIAYLQSLGIAGISDHDLMYTCDLSVKEELDVVEESHYIQQRVQKAQFLV
EFESQNKEFLMEQQRTRNEGAWLREPVFPSSTKKKCPKLNKPQPQPSPLLSTHHTQEEDI
SSKMASVVIDDLPKEGEKQDLSSIKVNVTTLQDGKGTGSADSIATLPKGFGSVEELCTNS
SLGMEKSFATKNEAVQKETLQEGPKQEALQEDPLESFNYVLSKSTKADIGPNLDQLKDDE
ILRHCNPWPIISITNESQNAESNVSIIEIADDLSASHSALQDAQASEAKLEEEPSASSPQ
YACDFNLFLEDSADNRQNFSSQSLEHVEKENSLCGSAPNSRAGFVHSKTCLSWEFSEKDD
EPEEVVVKAKIRSKARRIVSDGEDEDDSFKDTSSINPFNTSLFQFSSVKQFDASTPKNDI
SPPGRFFSSQIPSSVNKSMNSRRSLASRRSLINMVLDHVEDMEERLDDSSEAKGPEDYPE
EGVEESSGEASKYTEEDPSGETLSSENKSSWLMTSKPSALAQETSLGAPEPLSGEQLVGS
PQDKAAEATNDYETLVKRGKELKECGKIQEALNCLVKALDIKSADPEVMLLTLSLYKQLN
NN

>gi568815575r:72201726_72402869|GENSCAN_predicted_CDS_1|3789_bp
atgggcgccttgctatatcagaaacgcagcggacaccctgccatatctggaggggtggaa
gtcagcgatgggtctgcaacggtggcaaacagcagtggtggacgatatgtgaaagaggcc
aaagaagcaactaagaatggagacctggaagaagcatttaaacttttcaatttggcaaag
gacatttttcccaatgaaaaagtgctgagcagaatccaaaaaatacaggaagccttggag
gagttggcagaacagggagatgatgaatttacagatgtgtgcaactctggcttgctactt
tatcgagaactgcacaaccaactctttgagcaccagaaggaaggcatagctttcctctat
agcctgtatagggatggaagaaaaggtggtatattggctgatgatatgggattagggaag
actgttcaaatcattgctttcctttccggtatgtttgatgcatcacttgtgaatcatgtg
ctgctgatcatgccaaccaatcttattaacacatgggtaaaagaattcatcaagtggact
ccaggaatgagagtcaaaacctttcatggtcctagcaaggatgaacggaccagaaacctc
aatcggattcagcaaaggaatggtgttattatcactacataccaaatgttaatcaataac
tggcagcaactttcaagctttaggggccaagagtttgtgtgggactatgtcatcctcgat
gaagcacataaaataaaaacctcatctactaagtcagcaatatgtgctcgtgctattcct
gcaagtaatcgcctcctcctcacaggaaccccaatccagaataatttacaagaactatgg
tccctatttgattttgcttgtcaagggtccctgctgggaacattaaaaacttttaagatg
gagtatgaaaatcctattactagagcaagagagaaggatgctaccccaggagaaaaagcc
ttgggatttaaaatatctgaaaacttaatggcaatcataaaaccctattttctcaggagg
actaaagaagacgtacagaagaaaaagtcaagcaacccagaggccagacttaatgaaaag
aatccagatgttgatgccatttgtgaaatgccttccctttccaggaaaaatgatttaatt
atttggatacgacttgtgcctttacaagaagaaatatacaggaaatttgtgtctttagat
catatcaaggagttgctaatggagacgcgctcacctttggctgagctaggtgtcttaaag
aagctgtgtgatcatcctaggctgctgtctgcacgggcttgttgtttgctaaatcttggg
acattctctgctcaagatggaaatgagggggaagattccccagatgtggaccatattgat
caagtaactgatgacacattgatggaagaatctggaaaaatgatattcctaatggaccta
cttaagaggctgcgagatgagggacatcaaactctggtgttttctcaatcgaggcaaatt
ctaaacatcattgaacgcctcttaaagaataggcactttaagacattgcgaatcgatggg
acagttactcatcttttggaacgagaaaaaagaattaacttattccagcaaaataaagat
tactctgtttttctgcttaccactcaagtaggtggtgtcggtttaacattaactgcagca
actagagtggtcatttttgaccctagctggaatcctgcaactgatgctcaagctgtggat
agagtttaccgaattggacaaaaagagaatgttgtggtttataggctaatcacttgtggg
actgtagaggaaaaaatatacagaagacaggttttcaaggactcattaataagacaaact
actggtgaaaaaaagaaccctttccgatattttagtaaacaagaattaagagagctcttt
acaatcgaggatcttcagaactctgtaacccagctgcagcttcagtctttgcatgctgct
cagaggaaatctgatataaaactagatgaacatattgcctacctgcagtctttggggata
gctggaatctcagaccatgatttgatgtacacatgtgatctgtctgttaaagaagagctt
gatgtggtagaagaatctcactatattcaacaaagggttcagaaagctcaattcctcgtt
gaattcgagtctcaaaataaagagttcctgatggaacaacaaagaactagaaatgagggg
gcctggctaagagaacctgtatttccttcttcaacaaagaagaaatgccctaaattgaat
aaaccacagcctcagccttcacctcttctaagtactcatcatactcaggaagaagatatc
agttccaaaatggcaagtgtagtcattgatgatctgcccaaagagggtgagaaacaagat
ctctccagtataaaggtgaatgttaccaccttgcaagatggtaaaggtacaggtagtgct
gactctatagctactttaccaaaggggtttggaagtgtagaagaactttgtactaactct
tcattgggaatggaaaaaagctttgcaactaaaaatgaagctgtacaaaaagagacatta
caagaggggcctaagcaagaggcactgcaagaggatcctctggaaagttttaattatgta
cttagcaaatcaaccaaagctgatattgggccaaatttagatcaactaaaggatgatgag
attttacgtcattgcaatccttggcccattatttccataacaaatgaaagtcaaaatgca
gaatcaaatgtatccattattgaaatagctgatgacctttcagcatcccatagtgcactg
caggatgctcaagcaagtgaggccaagttggaagaggaaccttcagcatcttcaccacag
tatgcatgtgatttcaatcttttcttggaagactcagcagacaacagacaaaatttttcc
agtcagtctttagagcatgttgagaaagaaaatagcttgtgtggctctgcacctaattcc
agagcagggtttgtgcatagcaaaacatgtctcagttgggagttttctgagaaagacgat
gaaccagaagaagtagtagttaaagcaaaaatcagaagtaaagctagaaggattgtttca
gatggcgaagatgaagatgattcttttaaagatacctcaagcataaatccattcaacaca
tctctctttcaattctcatctgtgaaacaatttgatgcttcaactcccaaaaatgacatc
agtccaccaggaaggttcttttcatctcaaatacccagtagtgtaaataagtctatgaac
tctagaagatctctggcttctaggaggtctcttattaatatggttttagaccacgtggag
gacatggaggaaagacttgacgacagcagtgaagcaaagggtcctgaagattatccagaa
gaaggggtggaggaaagcagtggcgaagcctccaagtatacagaagaggatccttccgga
gaaacactgtcttcagaaaacaagtccagctggttaatgacgtctaagcctagtgctcta
gctcaagagacctctcttggtgcccctgagcctttgtctggtgaacagttggttggttct
ccccaggataaggcggcagaggctacaaatgactatgagactcttgtaaagcgtggaaaa
gaactaaaagagtgtggaaaaatccaggaggccctaaactgcttagttaaagcgcttgac
ataaaaagtgcagatcctgaagttatgctcttgactttaagtttgtataagcaacttaat
aacaattga

>gi568815575r:72201726_72402869|GENSCAN_predicted_peptide_2|47_aa
MKGLLDIDIDGFQRMQQQGTILEAESSPHQIPILLAPSSWTLQPPEP

>gi568815575r:72201726_72402869|GENSCAN_predicted_CDS_2|144_bp
atgaagggcctgcttgacatcgatattgatggatttcaaaggatgcagcaacaaggcacc
atcttggaagcagagagcagccctcaccagataccaatcctgctggcaccttcatcttgg
actcttcagcctccagaaccataa

>gi568815575r:72201726_72402869|GENSCAN_predicted_peptide_3|296_aa
MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE
VKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAK
YKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTIQIDLETGKITDFIKFDTGNL
CMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSFATRLSNIFVIGKGNKPWISLPR
GKGIRLTIAEERDKRLAAKQSMNFHDPEKLGLFAILLVKKNAHTFTKPTGSEKVMN

>gi568815575r:72201726_72402869|GENSCAN_predicted_CDS_3|891_bp
atggctcgtggtcccaagaagcatctgaagcgggtggcagctccaaagcattggatgctg
gataaattgaccggtgtgtttgctcctcgtccatccaccggtccccacaagttgagagag
tgtctccccctcatcattttcctgaggaacagacttaagtatgccctgacaggagatgaa
gtaaagaagatttgcatgcagcggttcattaaaatcgatggcaaggtccgaactgatata
acctaccctgctggattcatggatgtcatcagcattgacaagacgggagagaatttccgt
ctgatctatgacaccaagggtcgctttgctgtacatcgtattacacctgaggaggccaag
tacaagttgtgcaaagtgagaaagatctttgtgggcacaaaaggaatccctcatctggtg
actcatgatgcccgcaccatccgctaccccgatcccctcatcaaggtgaatgataccatt
cagattgatttggagactggcaagattactgatttcatcaagttcgacactggtaacctg
tgtatggtgactggaggtgctaacctaggaagaattggtgtgatcaccaacagagagagg
caccctggatcttttgacgtggttcacgtgaaagatgccaatggcaacagctttgccact
cgactttccaacatttttgttattggcaagggcaacaaaccatggatttctcttccccga
ggaaagggtatccgcctcaccattgctgaagagagagacaaaagactggcggccaaacag
agcatgaatttccacgaccctgaaaaattgggcttatttgccattttactggtgaagaaa
aatgcccacaccttcactaagcccacaggaagtgagaaggttatgaactga

>gi568815575r:72201726_72402869|GENSCAN_predicted_peptide_4|407_aa
MEGMGLHKLKVKIKTPRLSAHIIFSDHNIKAEFLNVASKSGSCNLIDPILCCFPAPISTF
AHAVPNTWRMLILSSDVTYLPLHFKAPRGRVANGAAAGAERDRFAVAVAAACVPGAGGSA
ASLAAHRAPRFPLSRAGGFSEAGGGCSPKGRPEAKSGQRDWELVAGGPPGISRREGTCCS
RFPSRLSQPFRSAQQLQLAASLPANLSNFCQGSEMPTTSRPALDVKGGTSPAKEDANQEM
SSVAYSNLAVKDRKAVAILHYPGVASNGTKASGAPTSSSGSPIGSPTTTPPTKPPSFNLH
PAPHLLASMHLQKLNSQYQGMAAATPGQPGEAGPLQNWDFGAQAGGAESLSPSAGAQSPA
IIDSDPVDEEVLMSLVVELGLDRANELPELWLGQNEFDFTADFPSSC

>gi568815575r:72201726_72402869|GENSCAN_predicted_CDS_4|1224_bp
atggagggcatgggtttgcacaagctgaaagtgaagataaagactccacgcttatctgcc
cacatcatctttagtgaccacaatataaaggctgaatttcttaacgtggcatccaagtct
ggctcctgcaacctcatagatcccatcctgtgctgtttcccagctcccatcagcaccttt
gcccatgctgtccccaatacctggagaatgctgatcctcagctcagatgtcacctatctc
ccacttcattttaaggcgccccggggtcgggtggccaacggcgcggccgcgggcgctgag
cgcgaccggttcgcggtagcggtggcggcggcgtgcgtgccaggggctgggggctccgcc
gcctctcttgcggctcaccgagctccgcgcttccctctctccagggcaggcggcttctca
gaggcgggagggggctgctcgcccaagggaaggcctgaagcgaagagcgggcagcgggac
tgggaactggtggccggggggccgccaggcatcagccggcgagaaggcacttgttgctct
aggtttcccagccgcctgtcgcagccgtttcgcagtgcacaacagctccagctggcagca
tcacttcccgccaatttatccaacttctgccaaggctctgaaatgccaacaacgtcgagg
cctgcacttgatgtcaagggtggcacctcacctgcgaaggaggatgccaaccaagagatg
agctccgtggcctactccaaccttgcggtgaaagatcgcaaagcagtggccattctgcac
taccctggggtagcctcaaatggaaccaaggccagtggggctcccactagttcctcggga
tctccaataggctctcctacaaccacccctcccactaaacccccatccttcaacctgcac
cccgcccctcacttgctggctagtatgcacctgcagaaacttaatagccagtatcagggg
atggctgctgccactccaggccaacccggggaggcaggacccctgcaaaactgggacttt
ggggcccaggcgggaggggcagaatcactctctccttctgctggtgcccagagccctgct
atcatcgattcggacccagtggatgaggaagtgctgatgtcgctggtggtggaactgggg
ttggaccgagccaatgagcttccggagctgtggctggggcagaatgagtttgacttcact
gcggactttccatctagctgctaa

>gi568815575r:72201726_72402869|GENSCAN_predicted_peptide_5|90_aa
MFFTAYGPDYVLEITPSCRPDRNEPHRIQQILNYIKGIINTEEETSNLDWGNHEGYKQAV
TLKLNLGPGMGGGIPGKGTGIHEGKKAQEI

>gi568815575r:72201726_72402869|GENSCAN_predicted_CDS_5|273_bp
atgtttttcacagcatatggtcctgattatgtgctggaaatcacgccaagctgccggcca
gaccgcaatgagccccaccgaatccaacaaatcctcaactacatcaaaggtattattaac
acagaggaggagacaagcaatctagactggggcaaccatgaaggctacaagcaggcggtg
acactcaagctgaatcttgggccaggcatgggaggaggcattccaggcaaagggactgga
atacatgaaggcaagaaggcacaggaaatttag