GENSCAN 1.0	Date run:  4-Nov-116	Time: 16:19:04

Sequence gi568815583r:79861070_80071119 : 210050 bp : 42.77% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Term +    320    441  122  0  2  128   39    56 0.509   2.36
 1.02 PlyA +   2320   2325    6                               1.05

 2.00 Prom +   2751   2790   40                              -4.35
 2.01 Init +   4295   4456  162  1  0   51   74   102 0.295   4.88
 2.02 Term +   9272   9310   39  1  0   70   48    84 0.179  -1.19
 2.03 PlyA +   9469   9474    6                               1.05

 3.10 PlyA -  11080  11075    6                               1.05
 3.09 Term -  12240  12175   66  0  0  110   34    56 0.093  -0.64
 3.08 Intr -  12727  12597  131  2  2   50  110    46 0.073   2.49
 3.07 Intr -  28285  28024  262  1  1   61  109   203 0.235  15.84
 3.06 Intr -  36013  35803  211  0  1   72   86   329 0.988  29.09
 3.05 Intr -  36319  36092  228  0  0   48   99   152 0.826   8.36
 3.04 Intr -  36538  36477   62  1  2   69   89    22 0.166  -2.99
 3.03 Intr -  53606  53519   88  1  1   57   89    89 0.169   4.95
 3.02 Intr -  56880  56729  152  0  2  -24   48   132 0.080  -3.96
 3.01 Init -  58293  58234   60  0  0   69   59    53 0.139   1.84
 3.00 Prom -  59852  59813   40                              -6.65

 4.00 Prom +  60355  60394   40                              -5.65
 4.01 Init +  61577  62703 1127  1  2   59   45   652 0.515  51.70
 4.02 Intr +  65629  65801  173  1  2   52   31   133 0.409   2.66
 4.03 Intr +  65954  66130  177  0  0  -39   33   206 0.018   1.37
 4.04 Intr +  68098  68132   35  2  2   87   75    31 0.018  -1.28
 4.05 Term +  74223  74360  138  2  0   85   43   140 0.048   6.18
 4.06 PlyA +  76598  76603    6                               1.05

 5.00 Prom +  81670  81709   40                              -4.85
 5.01 Init +  83453  83665  213  1  0   56    4   249 0.797  12.09
 5.02 Intr +  83830  84025  196  0  1  -41   87   217 0.382   6.77
 5.03 Term +  84123  84511  389  1  2 -108   43   568 0.387  26.82
 5.04 PlyA +  84548  84553    6                               1.05

 6.00 Prom +  85416  85455   40                              -6.05
 6.01 Init +  93793  93845   53  0  2   72   53    70 0.557   2.58
 6.02 Term +  99431  99647  217  2  1   83   40   188 0.980   9.13
 6.03 PlyA + 100115 100120    6                               1.05

 7.05 PlyA - 100357 100352    6                               1.05
 7.04 Term - 110057 109559  499  1  1   65   41   248 0.419  10.81
 7.03 Intr - 120995 120873  123  1  0   26   56   162 0.713   5.58
 7.02 Intr - 126807 126642  166  1  1   28   99   116 0.761   4.80
 7.01 Init - 144993 144849  145  0  1   68   45   160 0.019  10.05
 7.00 Prom - 149467 149428   40                              -6.55

 8.00 Prom + 149852 149891   40                              -6.35
 8.01 Init + 156492 156731  240  2  0   64   42   233 0.496  14.26
 8.02 Intr + 164221 164278   58  0  1  125  101    26 0.945   5.14
 8.03 Term + 165522 165724  203  1  2  101   42   139 0.996   7.17
 8.04 PlyA + 167044 167049    6                               1.05

 9.05 PlyA - 167912 167907    6                               1.05
 9.04 Term - 170798 170678  121  1  1   95   43    83 0.689   1.47
 9.03 Intr - 171931 171877   55  2  1   77  115    21 0.599   0.82
 9.02 Intr - 172527 172376  152  2  2   80   33   106 0.624   3.19
 9.01 Init - 173333 173218  116  2  2   84   47   102 0.689   5.43
 9.00 Prom - 178562 178523   40                              -0.85

10.02 PlyA - 179167 179162    6                               1.05
10.01 Term - 198358 197791  568  0  1   65   32   243 0.512   9.30

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815583r:79861070_80071119|GENSCAN_predicted_peptide_1|40_aa
XHHMEATTQLVVINARSFVISAIHSLRERSTYSHVLVMST

>gi568815583r:79861070_80071119|GENSCAN_predicted_CDS_1|123_bp
nggcatcacatggaggctaccacacaactggtagtcattaatgcacgttcatttgttatt
tcggccattcactcactcagggagaggtcaacatactctcatgtgttggtgatgagtacg
taa

>gi568815583r:79861070_80071119|GENSCAN_predicted_peptide_2|66_aa
MPYLSRKLRGISARYNLGKREFDNEIHVKEMAALGRAGRKPVWNCSQAPSQEEQWHNRAA
VKDSMA

>gi568815583r:79861070_80071119|GENSCAN_predicted_CDS_2|201_bp
atgccatatctaagtcggaaacttcgaggtatttctgcaagatataatttaggaaaaagg
gaatttgataatgaaatacatgttaaagaaatggctgccttgggaagagccggaaggaaa
ccagtgtggaactgcagtcaagcccccagccaggaggagcagtggcacaatcgagctgct
gtcaaagattccatggcctga

>gi568815583r:79861070_80071119|GENSCAN_predicted_peptide_3|419_aa
MSAPEPGACATQPGSQARQRKEEKLEPAWEGPYLVLLTTETAFRTAEKGWTHHTRVKKVS
SPSQSWDIVPSITPFSHEWPLHIFEDYRRVRADPFSLPHMIHKYHGAYNCLQYSVQNTLY
SPTTEQYKRCQAPWVLPAIFTIPASGAAASAVPVRAQAQGGQAAGQRRRLATAPLTGEGE
PDHGDRTRAGSQGPEARPRIHLGAARGGDRTRGRPGRRGRDWTRLGREMAAAAVSSAKRS
LRGELKQRLRAMSAEERLRQSRVLSQKVIAHSEYQKSKRISIFLSMQDEIETEEIIKDIF
QRGKICFIPRYRFQSNHMDMVRIESPEEISLLPKTSWNIPQPGEGDVREEALSTAHKAPY
HKLSLPLLAAELLFFPASPILVKLPFLRTELGAWEPHQIRKKAQMKYLIDGHTTHEWQK

>gi568815583r:79861070_80071119|GENSCAN_predicted_CDS_3|1260_bp
atgagcgcaccggagccaggagcctgtgccacgcagccaggcagccaggcgcgccagagg
aaagaagaaaaactggagccagcctgggaaggaccctaccttgtgctgctaaccaccgag
actgcctttcgcacagcagaaaaaggatggacacatcatacccgagtcaagaaagtgtca
tcaccttcacaatcatgggacattgttccaagtataaccccgttttcacacgaatggccc
cttcacatatttgaagactaccgtcgtgtccgtgctgaccctttctccctgccacacatg
atacacaagtatcacggtgcttacaattgcctacagtattcggtacaaaatacgctgtac
agtcccactactgaacagtacaagagatgccaggcaccgtgggtactgccggccatcttt
accatccccgccagtggcgctgccgcctccgcggtcccggtgagggcccaggctcaggga
ggtcaggcggcagggcagcgacggcgcctcgccaccgctcccctaaccggggagggcgag
ccggaccacggggaccgcacgagggctgggtcccaagggccagaggcgaggccgcggatc
cacctgggagcggccaggggcggagaccgaacccgagggcgcccagggcgccgagggcgg
gactggactcggcttgggcgtgagatggcggcggcagcggtgagcagcgccaagcggagc
ctgcggggagagctgaagcagcgtctgcgggcgatgagtgccgaggagcggctacgccag
tcccgcgtactgagccagaaggtgattgcccacagtgagtatcaaaagtccaaaagaatt
tccatctttctgagcatgcaagatgaaattgagacagaagagatcatcaaggacattttc
caacgaggcaaaatctgcttcatccctcggtaccggttccagagcaatcacatggatatg
gtgagaatagaatcaccagaggaaatttctttacttcccaaaacatcctggaatatccct
cagcctggtgagggtgatgttcgggaggaggccttgtccacagctcacaaagccccctac
cacaagttaagtctgccccttctggcagcagagctgctgttttttccagccagccccata
ttggtaaaactgccattcttgaggactgagctgggggcctgggaacctcaccagatcaga
aaaaaggctcagatgaagtaccttatcgatggtcacacaactcatgagtggcagaaataa

>gi568815583r:79861070_80071119|GENSCAN_predicted_peptide_4|549_aa
MVSPSTLEIDPKHQPLHRRRRLWSAPPELGDTSSSQTPPQHPKCPDQHPKAGLLYKAESL
PTKQFPTSDSSPRRTALLDPTNPPTPIGPSTQRVHNPEKELQALYLQASNPQLQLTSPLP
EQDHEYPPRADLAGYTKPGARPEGSSGTSSATGASPPSPARRPALTSSPPPPPSLTDAPG
RLASRPPPPPARRWRLAAPRYSSASGPSGPAARLCAETQGEAPRGPRAVGGSGGAGEPRW
SRGPAQRERLLGCSCCFPSFFTGTCSFRTSWSAFTLELTSSIPAPLPPPPAALSLSQQQG
KSRRKEASTPLTPAEAPAYSRARPRRQGSPSAGPEAPLATDEPPPQRRSGIRGGSANIRS
LQPSSLRPSAHRGSALYSGGDLENLCVDTLYLANLVGTWRTFVSSSGIVNAPISALSKQT
TGLSVKWTNQKDVAVTLTGKVCSFTPEPVRPRTHQKEETPNTSGRQEEQTPDTLPLRTVT
LTARVHGFILEVKSCVHGNQMILCVGRETEKRNKTQRQTTEKEQWAQGTGAQHMEDPHQC
PSLSSLSIY

>gi568815583r:79861070_80071119|GENSCAN_predicted_CDS_4|1650_bp
atggtctccccatccacgctagaaattgatcccaaacaccaaccgctgcatagacgtcgg
cgactttggtctgcaccccccgaacttggtgatacctcatcaagccaaacccctccccaa
catccaaaatgcccagaccagcatccgaaagctggtctcctatacaaagcagaatccctg
cctacaaagcagtttcccacctccgactcctccccacggcgaacagcccttctggatcca
accaacccaccaaccccaatagggcccagcacccagagggtccacaatccagagaaggag
ctacaagccctgtacttgcaagcctcgaacccccaactccaactgacctcccctctgcca
gagcaagaccacgagtacccgccgagagcggacctggctggctacacaaagccaggcgcc
cgaccagagggatcctccgggacgtcctccgccaccggggcgtccccgcccagccccgcc
cggcgcccggcgctcaccagctctcctccccctcctcctagcctgacagacgctccaggt
cgtctagcaagccgccctcccccgccgccagcaagaaggtggcgtctcgcagctcctcgt
tattcgtccgcctcgggtccatccggccccgccgcccgactttgcgctgagacccaaggg
gaagccccgaggggaccccgcgccgtaggagggagtggaggagccggcgaaccgcgatgg
agccggggcccagcacagcgcgagcggctcctcggctgttcgtgctgcttccccagcttc
ttcaccggcacctgcagcttccgcacctcctggtccgcgttcacgttagagttaacgtcc
tccatcccggccccgctgcctccgccgcccgcggccctctcgctctcgcagcaacaaggg
aagagccggaggaaagaggcgtccacgccgctcactccagccgaggcccccgcatatagc
agggccaggccccgtcgccagggttcccccagcgcgggtcccgaagcaccgctggccaca
gatgaaccgcctcctcagcgcaggtccgggattcggggaggcagcgccaatatccggtct
ctgcagccatcttccctccgtccctccgcccaccgagggtcggccctctactctggtggg
gacttggagaacctttgtgtggacactctgtatctagctaatctagtggggacgtggaga
acctttgtgtctagctcagggattgtaaacgcaccaatcagcgccctgtcaaaacagacc
actgggctctctgtaaaatggaccaatcagaaggatgtggctgtaacactcacgggaaag
gtctgcagcttcactcctgagccagtgagaccacgaacccaccagaaggaagaaactccg
aacacatccggacgtcaggaggaacaaactccggacacgctgcctttaagaactgtaaca
ctcactgctagggtccacggcttcattcttgaagtcaaatcttgtgtacacggcaaccag
atgatcctttgtgtgggacgagagactgagaaaagaaataagacacagagacaaactaca
gagaaagaacagtgggcccagggaaccggcgctcagcatatggaggacccgcaccagtgc
ccgtctctgagttccctcagtatttattga

>gi568815583r:79861070_80071119|GENSCAN_predicted_peptide_5|265_aa
MNGDQKSDVYAQEKQDFFQHFSQIVGVLTEDEMGHSEIGDAIARLKDVLEYNAIGGKYHR
GLTVLVAFQELDAINYAILLEACIYYLLKLYCQAQPYYLNLIELFLQISCQPEIGQTLDL
ITAPRTMWILADSLKTARQCLEDPTGDREFFQIQDGYLDLFGDPTVTRKVGTDIQDNKCS
WLVVQCLQRSTLEQYQILKENYGQKKAKKVVQVKALYEELDLPAVFLQYEEDGYSHIMGL
TEQYAAPLLPAMFLGLVYKIYKQKK

>gi568815583r:79861070_80071119|GENSCAN_predicted_CDS_5|798_bp
atgaatggggaccagaaatcagatgtttatgcccaagaaaagcaggatttctttcagcac
ttctcccagatcgttggggtgctgactgaggatgagatggggcactcagagataggagat
gctattgcccggctcaaggacgtcctggagtacaatgccattggaggcaagtatcaccgg
ggtttgacggtgctagtagcgttccaggagctggatgccatcaattatgctatccttctg
gaagcatgtatctactacctgctgaagctctattgccaagcacagccctattacctgaac
ctgatcgagctcttcctgcagatttcctgtcagcctgagattgggcagaccctggacctc
atcacagcccctaggacaatgtggattttggcagattcactgaaaacagcacgccaatgc
ttagaagatcctactggagatcgagagttttttcaaattcaggatggttaccttgacctc
tttggggaccccactgtgacccgcaaagttggcactgacatccaggacaacaaatgcagc
tggctggtggttcagtgtctgcaacgatccactctggaacagtaccagatcctgaaggaa
aattacggacagaagaaggccaagaaggtagtccaggtgaaggcactgtatgaggagctg
gatctgccggccgtgttcttgcagtatgaggaagacggttacagccacattatgggtctc
actgaacagtacgcagcgcccctgctcccagccatgtttctggggcttgtgtacaaaatc
tacaagcagaaaaagtga

>gi568815583r:79861070_80071119|GENSCAN_predicted_peptide_6|89_aa
MGSGGSGVGGGRPVTESQISPSILHVGLPYPSTPNVKPEREGCGGGVSGNSKQPGALETA
ESIGKKEGRREEGSRPESASSLSLLLSLA

>gi568815583r:79861070_80071119|GENSCAN_predicted_CDS_6|270_bp
atgggatcaggaggaagtggtgtaggaggaggacgcccagtgactgagagccaaatatcc
ccgagtatcctgcatgtcgggttgccatatccatcaaccccaaatgtcaagccagagaga
gaaggctgcggaggaggcgtcagtggaaactctaagcagccaggggcactggaaactgca
gaaagcataggaaagaaggaaggaaggagggaagagggaagccgacctgagtctgcttct
agcctgagtctgcttctcagtctagcctag

>gi568815583r:79861070_80071119|GENSCAN_predicted_peptide_7|310_aa
MVMDGSPEPVSLQCFSNLTGTECSEAAGGYAKEDEELLVAPLPEPSNLGGSKHYEEDKVK
GKLMRISEGDHSRQQRAVSTKVLRGRVCMGCAGNCKTNGVVGVRKVHPMEATGPTGREPE
GAEPAQLTRSSAAQNRIAPANPANWQKMTDCEFGYIYRLAQDYLQCVLQIPQPGSGPSKT
SRVLQNVAFSVQKEVEKNLKSCLDNVNVVSVDTARTLFNQVMEKEFEDGIINWGRIVTIF
AFEGILIKKLLRQQIAPDVDTYKEISYFVAEFIMNNTGEWIRQNGGWVCVMEKFFIVLSC
EIEIENFLAS

>gi568815583r:79861070_80071119|GENSCAN_predicted_CDS_7|933_bp
atggtgatggatggaagcccggagccagtcagtctgcaatgtttcagcaacctcacaggc
acagagtgctccgaggctgctggagggtatgccaaagaagacgaagaattactagtggct
cctcttccagagccctctaatctgggtggcagtaagcactatgaagaagataaggtgaag
ggaaaactcatgcggatatcagaaggagatcactccaggcagcagagggctgtgagtaca
aaggtgctgaggggcagggtgtgcatggggtgtgctgggaactgcaagacgaatggcgtg
gttggagtcagaaaagtacatcccatggaggccactggtcccacaggacgagagccagag
ggagcagagccagcccagctaacccgtagctctgcagctcaaaacagaattgccccagcc
aatcctgcaaactggcagaagatgacagactgtgaatttggatatatttacaggctggct
caggactatctgcagtgcgtcctacagataccacaacctggatcaggtccaagcaaaacg
tccagagtgctacaaaatgttgcgttctcagtccaaaaagaagtggaaaagaatctgaag
tcatgcttggacaatgttaatgttgtgtccgtagacactgccagaacactattcaaccaa
gtgatggaaaaggagtttgaagacggcatcattaactggggaagaattgtaaccatattt
gcatttgaaggtattctcatcaagaaacttctacgacagcaaattgccccggatgtggat
acctataaggagatttcatattttgttgcggagttcataatgaataacacaggagaatgg
ataaggcaaaacggaggctgggtatgtgtgatggaaaaattcttcattgttctttcctgt
gaaatagaaattgagaatttccttgctagttaa

>gi568815583r:79861070_80071119|GENSCAN_predicted_peptide_8|166_aa
MNNSRNAALRAVTLTMKVCSFTPEPARPRTHQKEETPNTSEHQKEQTPDTLPLRTVTLTV
RVHGFILEVSETKNLPILDTMGPSSCRKTSSGVPLNLRYGILGRVTTSPAGSWYISQQGW
ASISERTRPLCWNQSSGTIRILAEGNKSASCSESASLKASELPGRI

>gi568815583r:79861070_80071119|GENSCAN_predicted_CDS_8|501_bp
atgaacaactccagaaacgccgccttaagagctgtaacactcaccatgaaggtctgcagc
ttcactcctgagccagcgagaccacgaacccaccagaaggaagaaactccgaacacatct
gaacatcagaaggaacaaactccggacacgctgcctttaagaactgtaacactcactgtg
agggtccacggcttcattcttgaagtcagtgagaccaagaacctaccaattctggacaca
atgggaccgtctagttgcaggaaaacaagctcaggggtcccactgaatctacgttatggg
atattaggaagagtaactacctccccagctggaagctggtatatctcgcagcagggctgg
gcttctatttcagaaagaacacggccactttgctggaaccagagcagtggcacaatccga
atcctggcggagggcaacaagtcagcttcatgctcagaatctgcttctctgaaggcctct
gaattaccaggaagaatctaa

>gi568815583r:79861070_80071119|GENSCAN_predicted_peptide_9|147_aa
MEWESEKRLGFRQHAFSGLVPGVLVSRISVATEENLGGGPAVLACVQTCKFSKAHRLQCD
QLSQFAQNWFGFSIVPGNPSSAGLRSLGLKTRSQKGRMNGETDHFEKRQWVGCWDSIGKQ
VSVELIMEEEGDNNQSIISSVISAIMA

>gi568815583r:79861070_80071119|GENSCAN_predicted_CDS_9|444_bp
atggagtgggaaagtgagaaacggctgggtttcaggcagcatgcattttctggcttggtc
cctggggtcttggtgtcccgtatttcagttgcaacagaagagaatttaggaggcggacca
gctgtcctggcgtgtgtgcagacctgcaagttcagcaaagcccacagacttcagtgtgac
caactgtcccagtttgcccagaactggtttggttttagcattgtcccaggaaacccctct
agtgcaggactgaggtccttggggctgaaaactaggagccaaaagggcagaatgaatggt
gaaactgatcattttgaaaagcggcagtgggttgggtgctgggactctattggtaaacaa
gtttctgtggagctcattatggaggaggagggagacaataaccagtcaattatatccagt
gtgataagtgctataatggcctaa

>gi568815583r:79861070_80071119|GENSCAN_predicted_peptide_10|189_aa
XVPCSTALSGALPAAVSLPPIATGRRLRGAAETLRAWLCRFRYLCHLAGNGVSLSWTEAP
KRVALHLPLVQEGILSFCLPMQAGASVCKRKVRAQGAYWKAVLCPVLNWDLEIEARREAC
MHTCAIHTCTGTSTPSSSLFQKHGVSSHLRGARWAAALELGVIGRMAPPEVFQPSFGLTS
ITSRKYVTL

>gi568815583r:79861070_80071119|GENSCAN_predicted_CDS_10|570_bp
nntgtcccttgctccactgccctctctggggcgcttcccgccgcggtttctctacctcca
atagctacgggaaggcgattaagaggtgccgcggagactttaagggcttggttatgtagg
ttcaggtacctttgccacctcgcagggaatggcgtgtccctgtcttggactgaggcacca
aaaagagttgcactccacctgccacttgtgcaggaaggaattctgagcttctgtcttccc
atgcaggccggcgcctcagtctgcaagcgcaaagtccgagctcagggcgcatactggaaa
gcagttctctgccctgtcctgaactgggacttggaaatagaagcaagacgagaagcgtgc
atgcacacgtgtgcaatacatacatgcacaggcacaagcacccccagttccagcctgttc
caaaagcacggggtcagttcccacctgcgtggtgcacgctgggctgctgcgctggaacta
ggggtgataggcagaatggctccccctgaagtttttcagccttcgttcgggctcacgagc
atcacgagcaggaagtacgtgacactttag