GENSCAN 1.0	Date run:  4-Nov-116	Time: 16:16:08

Sequence gi568815585f:27522873_27723247 : 200375 bp : 39.49% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   5388   5446   59  2  2   79   97    42 0.429   5.04
 1.02 Intr +  10277  10564  288  2  0   50   73   279 0.496  18.04
 1.03 Intr +  12694  12785   92  1  2    0   59   116 0.437  -1.38
 1.04 Term +  15729  15928  200  1  2   83   38   153 0.795   6.38
 1.05 PlyA +  16889  16894    6                               1.05

 2.00 Prom +  23293  23332   40                              -4.75
 2.01 Init +  25031  25179  149  1  2   31   80   159 0.448   9.01
 2.02 Term +  26553  26652  100  0  1  119   37    67 0.790   1.32
 2.03 PlyA +  26756  26761    6                               1.05

 3.09 PlyA -  27354  27349    6                               1.05
 3.08 Term -  27619  27457  163  0  1   97   47    73 0.346   0.53
 3.07 Intr -  30567  30336  232  1  1  102   84   306 0.604  27.51
 3.06 Intr -  33541  33364  178  1  1   95   94   112 0.991  11.07
 3.05 Intr -  37113  36970  144  0  0   82  100    61 0.987   6.26
 3.04 Intr -  39909  39541  369  0  0   90   97   454 0.991  40.88
 3.03 Intr -  44967  44768  200  1  2   53   69   212 0.996  13.95
 3.02 Intr -  46404  46157  248  2  2   63   45   204 0.804   9.78
 3.01 Init -  58831  58425  407  1  2   60  115   142 0.838  10.21
 3.00 Prom -  68134  68095   40                              -6.15

 4.00 Prom +  68151  68190   40                              -6.45
 4.01 Init +  69731  69782   52  1  1   70   58    41 0.013   0.67
 4.02 Intr +  76622  76703   82  0  1   74  103    36 0.079   1.48
 4.03 Intr +  97295  97765  471  2  0   43   54   240 0.171   7.37
 4.04 Intr +  98566  98723  158  1  2  102  110    72 0.821   9.53
 4.05 Intr +  98789  98870   82  0  1   21   99    20 0.588  -5.82
 4.06 Intr +  99063  99137   75  0  0   37   82   112 0.567   3.21
 4.07 Intr + 100003 100238  236  1  2   11   65   211 0.007   7.51
 4.08 Intr + 104898 104959   62  1  2   74   75    36 0.004  -1.57
 4.09 Intr + 118820 118895   76  1  1   41   80   103 0.276   2.97
 4.10 Intr + 122909 122981   73  0  1   86   98    -3 0.558  -1.95
 4.11 Intr + 125507 125581   75  2  0  120  111    79 0.989  11.11
 4.12 Intr + 132020 132133  114  2  0   60   81    98 0.870   4.94
 4.13 Intr + 138716 138833  118  2  1   73   55   105 0.698   5.25
 4.14 Intr + 141296 141326   31  1  1  123   60    48 0.422   2.29
 4.15 Intr + 142891 143077  187  2  1   20   77   323 0.239  22.23
 4.16 Intr + 154162 154193   32  1  2   50  115    19 0.003  -2.34
 4.17 Intr + 155871 156064  194  1  2   84   49    95 0.007   3.49
 4.18 Term + 157356 157409   54  2  0   93   37    57 0.061  -2.32
 4.19 PlyA + 159523 159528    6                               1.05

 5.00 Prom + 165928 165967   40                              -6.05
 5.01 Sngl + 169904 170287  384  1  0   66   42   202 0.967   9.43
 5.02 PlyA + 172521 172526    6                               1.05

 6.03 PlyA - 172622 172617    6                               1.05
 6.02 Term - 173921 173533  389  0  2  -29   49   473 0.952  25.82
 6.01 Intr - 197541 197345  197  2  2   64   64   113 0.105   4.64

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term + 100003 100378  376  1  1   11   37   306 0.821  11.03


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815585f:27522873_27723247|GENSCAN_predicted_peptide_1|212_aa
MGVAHEEALMNGLGHPLGDKYPTLPAAASLTSCTGSHRLQTGCKHRGAASEGGQSIEPAE
GAETRPSELGTSRASADHWWCPSSQGSDARLLQSAEKTNRTLHCYFLPDAHESHLCLQPY
HPERAQSCLNVERGRVLLMGKENARRARKRDRDKLLLKRNHLQLDMPNGGDAWNAAGRSL
SREAFKQELDDHITAGTCIPEKWTRASLSKVP

>gi568815585f:27522873_27723247|GENSCAN_predicted_CDS_1|639_bp
atgggggtggctcatgaggaggccctcatgaatggcttgggccatccccttggtgataaa
tatccaacccttcctgctgcagcttccctgacctcctgcaccgggagccaccggctgcaa
acaggctgcaaacaccggggagctgcaagcgagggcggccagtccatcgagccagcagag
ggcgctgaaacgcggcccagtgaactagggacgtccagggccagcgctgaccactggtgg
tgcccgagctcccagggctctgatgcccggctgctccagtccgcagagaaaactaaccgg
acactccactgctactttcttcccgatgctcatgagtctcacctttgtctacagccatac
caccctgaacgtgctcaatcttgtctgaacgttgaacgtggcagagtgctcctcatgggg
aaagaaaatgcgagaagagctaggaagagggacagggacaaattattactaaaaaggaat
cacttacaattagacatgcccaacggaggcgatgcctggaatgcagcagggaggtccctg
tcacgggaagccttcaagcaggagctagatgaccatatcacagcggggacctgtatacca
gaaaaatggacaagagcttccctttctaaggttccatga

>gi568815585f:27522873_27723247|GENSCAN_predicted_peptide_2|82_aa
MVLVMTVAVHAVVTGFADIRPEGYRTRSMIQLLKTKTHQKVFTPSGAQFGARALIRRCTL
SEDFCSVVEAGRGVKVQGSRAR

>gi568815585f:27522873_27723247|GENSCAN_predicted_CDS_2|249_bp
atggtattggttatgacagtggcagtacacgctgttgttactggctttgctgacatcagg
cctgagggatacagaactcgttctatgattcagttactgaaaacaaagacccaccagaag
gtctttactccatctggggcacagtttggtgcccgggctttgataagacgctgtacactg
agcgaggacttttgctcagtggtagaggctggcagaggggttaaagtccagggatctaga
gccagatag

>gi568815585f:27522873_27723247|GENSCAN_predicted_peptide_3|646_aa
MGTTSDEMVSVEQTSSSSLNPLCFECGQQHWTRENHLYNYQNEVDDDLVCHICLQPLLQP
LDTPCGHTFCYKCLRNFLQEKDFCPLDRKRLHFKLCKKSSILVHKLLDKLLVLCPFSSVC
KDVMQRCDLEAHLKNRCPGASHRRVALERRKTSRTQAEIENENGPTLLDPAGTLSPEADC
LGTGAVPVERHLTSASLSTWSEEPGLDNPAFEESAGADTTQQPLSLPEGEITTIEIHRSN
PYIQLGISIVGGNETPLINIVIQEVYRDGVIARDGRLLAGDQILQVNNYNISNVSHNYAR
AVLSQPCNTLHLTVLRERRFGNRAHNHSDSNSPREEIFQVALHKRDSGEQLGIKLVRRTD
EPGVFILDLLEGGLAAQDGRLSSNDRVLAINGHDLKYGTPELAAQIIQASGERVNLTIAR
PGKPQPGNTIREAGNHSSSSQHHTPPPYYSRPSSHKDLTQCVTCQEKHITVKKEPHESLG
MTVAGGRGSKSGELPIFVTSVPPHGCLARDGRIKRGDVLLNINGIDLTNLSHSEAVAMLK
ASAASPAVALKALEVQIVEEATQNAEEQPSTFSENEYDASWSPSWVMWLGLPSTLHSCHD
IVLRRSYLGSWGFSIVGGYEENHTNQPFFIKTIVLGTPAYYDGRLK

>gi568815585f:27522873_27723247|GENSCAN_predicted_CDS_3|1941_bp
atgggaacaacaagtgatgagatggtgtctgtggaacagacctcctcctcttctctaaac
cccctgtgttttgaatgtggccaacagcactggacaagagaaaaccatttgtacaattac
cagaatgaagtggatgatgacctagtctgccatatttgccttcaacctctgctgcagcca
ctagacacaccctgtggacatacattctgctacaagtgcctcagaaactttttacaagag
aaagatttctgtccgttggaccggaaaagacttcattttaagttgtgcaagaagtctagt
attctagttcataaactcctagacaaattattagttttatgtccattttcttcagtgtgc
aaagatgtaatgcaacgttgtgatctggaggcacatctcaaaaacagatgtcctggagct
tctcatcggagagttgccctggagagaaggaaaactagtagaactcaagcagagattgag
aatgaaaatgggcccactctactagatcctgcaggtaccttatctccagaagcagactgt
ttggggacaggcgcagtgcctgtggagcggcacttgacatcagcgtctctttccacatgg
agtgaggagcctggccttgacaaccctgcctttgaggagagcgctggagctgacaccaca
caacagccacttagtttaccagaaggagaaatcaccacgattgaaattcatcggtccaat
ccttacattcagttaggaatcagcattgtgggtggcaacgaaacacctttgattaacatt
gtcatccaggaggtctatcgggatggggtcattgccagagacgggagacttcttgctgga
gaccagattcttcaggtcaacaactacaatatcagcaatgtgtcccataactatgcccga
gctgtcctttcccagccctgcaacacactgcatcttactgtgcttcgagagaggcgcttt
ggcaaccgagcacacaaccattctgatagtaactctccacgagaagagattttccaagtg
gctcttcataaacgggactctggtgaacagcttggcattaaattggtgcgaaggacagat
gagccaggggtttttattcttgacctgttggaaggggggttggctgcccaggacggcagg
ctaagcagcaatgaccgagtgctggccatcaatgggcacgacctgaagtatggaactccg
gagcttgctgcccagattattcaggccagtggagagagagtgaatttaacaattgctaga
ccagggaaaccccagcctggtaacaccattagagaagcaggaaatcatagcagcagcagc
cagcaccacacaccaccaccgtattatagcagaccaagctcacataaggatcttactcag
tgtgttacatgccaagaaaaacacattactgtaaagaaggaaccacatgaatcccttggc
atgaccgttgctgggggcaggggaagtaagagtggtgagctgcccatctttgtgaccagt
gtgccaccccatggctgccttgcacgagatggcagaataaagagaggtgatgtgttgcta
aatatcaacggcattgatttgaccaatttaagtcacagtgaggcagttgcaatgctgaaa
gccagtgccgcgtcccctgctgttgcccttaaagcacttgaggtccagattgttgaggag
gcgactcagaacgcggaggagcagccgagtactttcagcgaaaatgagtatgatgccagt
tggtccccatcatgggtcatgtggcttgggcttcccagcacacttcatagctgccacgat
atagttttacgaagaagttacttgggaagttggggctttagtatcgttggtggatatgaa
gagaaccacaccaatcagccttttttcattaaaactattgtcttgggaactcctgcttat
tatgatggaagattaaagtga

>gi568815585f:27522873_27723247|GENSCAN_predicted_peptide_4|723_aa
MVWKAIRLEKITKSVDESSSLQSELTIPVKEIHLRYRQYTYVLTRPTPESTPAPQPGRAK
TAAKDQGSGASCGAAPAASRGAALTHTQLTPAPEAAARSQREGAQRGGQGKVTHWESAAA
RAAHGLLAPLLGTSSRSPRPAEGAESLPGSAPPGIAAAAAAAADFLAKSKLRPRLHFSTA
PAAFPGAAPRPSGPTRTRANRRCVDRLQFKPVVPQKAREGRGPRKGHPGSTPPQLGSRAA
FGLATGKGSDLGAAGLSGPRGKAALAPPPAPPAASGLAWSPRAPDPPAPPEDPETAPAME
EDQELERKISGLKTSMAEGERKTALEMVQAAGTDRHCVTFVLHEEDHTLGNSLRYMIMKN
PEVEFCGYTTTHPSESKINLRIQTREWVSGRKLEDSSELGTFVIVQWAYKKGAVTSIDVE
QTGRSGKAWWRGSLSHTYIFFSLCTRKPEGILKRARKAIEELLKEAKRGKTRAETMGPMG
CANVNLLEKSKLYQNYGNSFDFVDCLMSLEDSQGSRVTWAQMVTLKLIREKPGMVECLMP
VYHVISNTVEDRGRREMAECPNASVPPGEQDHEQKEGDKEPAKSQAQKEENPKKHRSHPY
KHSFRARGSASYSPPRKRSSQDKYEKRSNRRGTSSPTSSIHDNPVCCSCVWKEQAIKWDF
GAESFTAQLAMWTPCTDGVSIVKTSTGGESGEWTSGKGCTAEVMSQHVSDHLAKSLSSDY
ESV

>gi568815585f:27522873_27723247|GENSCAN_predicted_CDS_4|2172_bp
atggtatggaaagccatcagattggaaaagatcactaaaagtgtagatgagtcatcctca
ttgcaatctgaacttacgattcccgtaaaagaaattcatttacgttacagacaatatact
tatgttctaaccagacccacacccgagtccacgccagccccgcagcccgggcgagcgaag
acagccgcgaaggaccaaggctccggggcgagctgtggcgccgctccggccgcctcccgg
ggcgcggcgctgacccacacccagctgacgcccgcacctgaggcggctgcccgcagccag
cgagagggcgcgcagcgaggcgggcagggcaaagttactcactgggaaagcgcggctgcc
cgggccgcgcacgggctcctggcgccgctgctcggcaccagctcccgctctccgcggccc
gctgagggagcggagagcctgcccggctccgctccgccaggaatcgccgccgccgccgcc
gccgccgcggatttcctggcaaaaagcaaactccggccaagacttcacttctcaaccgcc
cctgctgccttcccgggggcagcgccaaggccgagcggcccaacccgcacccgggccaat
cggaggtgtgttgaccgactacagtttaagcctgtcgtcccacaaaaggcccgggagggc
cggggtcccaggaagggccatcctgggtcaacaccgccccagttgggaagtcgggccgct
ttcggacttgccactgggaagggaagtgatttgggggcggcaggcctgtctgggcctcgg
ggtaaggcggcgctggccccgccccctgcccctcccgccgcgagtggcctcgcgtggtcg
cccagagcccccgatccgccagcaccacctgaggatccagaaaccgccccagcgatggaa
gaggatcaggagctggagagaaaaatatctggattgaagacctcaatggctgaaggcgag
aggaagacagccctggaaatggtccaggcagctggaacagatagacactgtgtgacattt
gtattgcacgaggaagaccataccctaggaaattctctacgttacatgatcatgaagaac
ccggaagtggaattttgtggttacactacgacccatccttcagagagcaaaattaattta
cgcattcagactcgagaatgggtgagtggaaggaaactggaagacagcagtgaactgggg
acatttgtaatagtccagtgggcctataagaaaggagcagttacatctattgatgtggag
caaacagggagatcgggaaaggcttggtggagaggcagtctttctcatacatatatcttc
ttttctctttgtactcgtaaaccagaaggcatccttaagcgtgccaggaaagcaatagaa
gaactgcttaaggaggcaaaacgtgggaaaactagagctgaaacaatgggacccatgggt
tgtgcaaatgtcaaccttctggagaaaagcaaattatatcaaaactatggaaatagcttt
gactttgtagattgcctcatgagtctggaggactctcagggttcacgggtcacatgggct
cagatggttaccctaaagctgatacgagaaaagccaggaatggtggagtgtctaatgcca
gtttatcatgtcatctcaaatactgtggaagatcgggggaggcgggaaatggcagaatgt
cctaatgccagcgtgcccccaggagagcaagaccatgaacaaaaagagggcgataaggaa
ccagcgaagagccaggcccagaaagaagaaaacccgaagaaacacagaagccatccttac
aagcacagcttccgcgctcgaggttccgccagttactccccgccacgaaagcggagcagc
caggacaagtacgaaaagcggtccaaccggcgaggaacttccagtcctacaagctctatt
catgacaatccagtttgctgcagttgtgtctggaaagagcaggcaatcaaatgggatttt
ggagctgaatcattcaccgcccagctagcaatgtggacaccttgcacagatggtgtttcc
attgttaaaacttccactggtggtgaatcaggagagtggacttctggaaagggatgcact
gcagaggtgatgagtcagcatgtctctgaccatctggccaaatcattgtccagcgactat
gagtcagtatag

>gi568815585f:27522873_27723247|GENSCAN_predicted_peptide_5|127_aa
MDLLTIAPNSLLLEFLLPIPATLSSAGLELLVAKVVVVGKWENASSRDHMNGSTELEDET
ATRPFWASYATEATCVKGGRGGVTLLVEVIDSNYQTEIGGKEDYVWNPGDSLGCLLSGYT
ILHPPQQ

>gi568815585f:27522873_27723247|GENSCAN_predicted_CDS_5|384_bp
atggatcttctcaccattgcacctaatagtcttctcctggaatttttgcttcctatccca
gcaactttgagctctgctggtttggaactcttagtcgccaaggtggtggtagttgggaag
tgggagaatgcttccagcagggatcacatgaatggttccacagaactagaagatgagact
gctaccaggccattttgggcatcttatgccactgaagcaacatgcgtaaaaggagggagg
ggtggtgttaccctacttgttgaagtgattgattccaattaccaaactgaaattggaggc
aaggaggactatgtgtggaacccaggggactctctggggtgcctcttaagtggctatacc
attttgcatcccccccagcaatga

>gi568815585f:27522873_27723247|GENSCAN_predicted_peptide_6|195_aa
XSYGLSYPQPGTGGGPQGAYEVPPQVLSSRPLATSSSPALATISSDPLATTYRPCSLPAG
DCSVQKGGSKISQKKVAADEEEEEDDDDEDDEETEKKSTSEEIYTRYSSQKSTEVKREWK
RLKTINTKIKKTRILQKEKKTETPKGSSSVEDIKAKMQASVEKGGSLPKVETTFINYVKN
CFWMTDQEAIQDLWQ

>gi568815585f:27522873_27723247|GENSCAN_predicted_CDS_6|588_bp
nnctcttatggtctgagctatccccagcctggcacaggaggaggacctcaaggggcctat
gaagttcctccgcaggttctctccagcaggccccttgccacctcctcctcccctgccttg
gctaccatatcgtcagatcccctggccaccacatatcgtccctgttccctgccagccggg
gactgctcagtgcagaaaggtggtagcaagatttcacagaaaaaagttgctgctgatgaa
gaagaagaagaagatgatgatgatgaagatgatgaggaaactgaaaaaaaaagcacaagt
gaagaaatctataccagatactccagccaaaaaagcacagaagtcaaacgagaatggaaa
agactcaaaaccatcaacaccaagataaaaaagacaagaatccttcaaaaagagaaaaaa
actgaaacaccaaaaggatctagttctgtagaagatattaaagcaaaaatgcaagcaagt
gtagaaaaaggtggttctcttcccaaagtggaaaccacgttcatcaattatgtgaagaat
tgtttctggatgactgaccaggaggctattcaagatctctggcagtga