Result of FASTA (omim) for pF1KB8825
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB8825, 415 aa
  1>>>pF1KB8825 415 - 415 aa - 415 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.0364+/-0.000346; mu= 19.3092+/- 0.022
 mean_var=89.2046+/-20.183, 0's: 0 Z-trim(116.3): 570  B-trim: 2822 in 2/49
 Lambda= 0.135794
 statistics sampled from 26632 (27338) to 26632 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.679), E-opt: 0.2 (0.321), width:  16
 Scan time:  9.490

The best scores are:                                      opt bits E(85289)
NP_001136269 (OMIM: 300574) C-X-C chemokine recept ( 415) 2769 552.6 6.5e-157
XP_016884924 (OMIM: 300574) PREDICTED: C-X-C chemo ( 415) 2769 552.6 6.5e-157
XP_005262313 (OMIM: 300574) PREDICTED: C-X-C chemo ( 378) 2465 493.0 5.2e-139
NP_001495 (OMIM: 300574) C-X-C chemokine receptor  ( 368) 2435 487.1  3e-137
XP_005262314 (OMIM: 300574) PREDICTED: C-X-C chemo ( 278) 1409 286.0   8e-77
XP_016884925 (OMIM: 300574) PREDICTED: C-X-C chemo ( 268) 1379 280.1 4.6e-75
NP_001707 (OMIM: 601613) C-X-C chemokine receptor  ( 372)  845 175.6 1.8e-43
NP_116743 (OMIM: 601613) C-X-C chemokine receptor  ( 327)  835 173.6 6.3e-43
NP_001548 (OMIM: 146928) C-X-C chemokine receptor  ( 360)  827 172.1   2e-42
XP_016859481 (OMIM: 146928) PREDICTED: C-X-C chemo ( 360)  827 172.1   2e-42
XP_005246587 (OMIM: 146928) PREDICTED: C-X-C chemo ( 360)  827 172.1   2e-42
NP_001161770 (OMIM: 146928) C-X-C chemokine recept ( 360)  827 172.1   2e-42
XP_016859479 (OMIM: 146928) PREDICTED: C-X-C chemo ( 360)  827 172.1   2e-42
XP_016859480 (OMIM: 146928) PREDICTED: C-X-C chemo ( 360)  827 172.1   2e-42
NP_000625 (OMIM: 146929,609423) C-X-C chemokine re ( 350)  791 165.0 2.6e-40
NP_001288647 (OMIM: 600242) C-C chemokine receptor ( 372)  786 164.1 5.4e-40
NP_001288646 (OMIM: 600242) C-C chemokine receptor ( 372)  786 164.1 5.4e-40
NP_001288645 (OMIM: 600242) C-C chemokine receptor ( 372)  786 164.1 5.4e-40
NP_001829 (OMIM: 600242) C-C chemokine receptor ty ( 378)  786 164.1 5.4e-40
NP_001008540 (OMIM: 162643,193670) C-X-C chemokine ( 356)  758 158.6 2.3e-38
NP_003458 (OMIM: 162643,193670) C-X-C chemokine re ( 352)  754 157.8   4e-38
NP_113597 (OMIM: 601835) C-C chemokine receptor ty ( 374)  750 157.0 7.1e-38
NP_004358 (OMIM: 601835) C-C chemokine receptor ty ( 374)  750 157.0 7.1e-38
NP_001288643 (OMIM: 600242) C-C chemokine receptor ( 315)  747 156.4 9.5e-38
NP_057686 (OMIM: 600240) C-C chemokine receptor ty ( 362)  735 154.1 5.4e-37
NP_005499 (OMIM: 604836) C-C chemokine receptor ty ( 360)  734 153.9 6.1e-37
XP_016861176 (OMIM: 604836) PREDICTED: C-C chemoki ( 360)  734 153.9 6.1e-37
NP_001287 (OMIM: 602648) atypical chemokine recept ( 384)  731 153.3 9.6e-37
NP_001116513 (OMIM: 601267) C-C chemokine receptor ( 374)  694 146.1 1.4e-34
XP_011532371 (OMIM: 601267) PREDICTED: C-C chemoki ( 360)  685 144.3 4.7e-34
NP_001116868 (OMIM: 601267) C-C chemokine receptor ( 360)  685 144.3 4.7e-34
NP_001093638 (OMIM: 601373,609532,610379,612522) C ( 352)  683 143.9 6.1e-34
NP_000570 (OMIM: 601373,609532,610379,612522) C-C  ( 352)  683 143.9 6.1e-34
NP_006632 (OMIM: 604738) C-C chemokine receptor ty ( 357)  677 142.7 1.4e-33
NP_001243298 (OMIM: 604738) C-C chemokine receptor ( 357)  677 142.7 1.4e-33
NP_112477 (OMIM: 604738) C-C chemokine receptor ty ( 369)  677 142.7 1.4e-33
XP_011531614 (OMIM: 604738) PREDICTED: C-C chemoki ( 369)  677 142.7 1.4e-33
NP_001286 (OMIM: 601159) C-C chemokine receptor ty ( 355)  670 141.3 3.6e-33
NP_848540 (OMIM: 606065) atypical chemokine recept ( 350)  655 138.4 2.7e-32
NP_057641 (OMIM: 606065) atypical chemokine recept ( 350)  655 138.4 2.7e-32
XP_011531637 (OMIM: 601268) PREDICTED: C-C chemoki ( 355)  643 136.0 1.4e-31
NP_001828 (OMIM: 601268) C-C chemokine receptor ty ( 355)  643 136.0 1.4e-31
XP_006713023 (OMIM: 601268) PREDICTED: C-C chemoki ( 355)  643 136.0 1.4e-31
NP_847899 (OMIM: 601268) C-C chemokine receptor ty ( 355)  643 136.0 1.4e-31
NP_001158152 (OMIM: 601268) C-C chemokine receptor ( 373)  643 136.1 1.5e-31
NP_847898 (OMIM: 601268) C-C chemokine receptor ty ( 376)  643 136.1 1.5e-31
XP_016861174 (OMIM: 601268) PREDICTED: C-C chemoki ( 410)  643 136.1 1.6e-31
XP_016861175 (OMIM: 601268) PREDICTED: C-C chemoki ( 410)  643 136.1 1.6e-31
XP_011531593 (OMIM: 605163) PREDICTED: C-X-C chemo ( 342)  639 135.2 2.4e-31
XP_005264866 (OMIM: 605163) PREDICTED: C-X-C chemo ( 342)  639 135.2 2.4e-31


>>NP_001136269 (OMIM: 300574) C-X-C chemokine receptor t  (415 aa)
 initn: 2769 init1: 2769 opt: 2769  Z-score: 2938.0  bits: 552.6 E(85289): 6.5e-157
Smith-Waterman score: 2769; 100.0% identity (100.0% similar) in 415 aa overlap (1-415:1-415)

               10        20        30        40        50        60
pF1KB8 MELRKYGPGRLAGTVIGGAAQSKSQTKSDSITKEFLPGLYTAPSSPFPPSQVSDHQVLND
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MELRKYGPGRLAGTVIGGAAQSKSQTKSDSITKEFLPGLYTAPSSPFPPSQVSDHQVLND
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 AEVAALLENFSSSYDYGENESDSCCTSPPCPQDFSLNFDRAFLPALYSLLFLLGLLGNGA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AEVAALLENFSSSYDYGENESDSCCTSPPCPQDFSLNFDRAFLPALYSLLFLLGLLGNGA
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB8 VAAVLLSRRTALSSTDTFLLHLAVADTLLVLTLPLWAVDAAVQWVFGSGLCKVAGALFNI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VAAVLLSRRTALSSTDTFLLHLAVADTLLVLTLPLWAVDAAVQWVFGSGLCKVAGALFNI
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB8 NFYAGALLLACISFDRYLNIVHATQLYRRGPPARVTLTCLAVWGLCLLFALPDFIFLSAH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NFYAGALLLACISFDRYLNIVHATQLYRRGPPARVTLTCLAVWGLCLLFALPDFIFLSAH
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB8 HDERLNATHCQYNFPQVGRTALRVLQLVAGFLLPLLVMAYCYAHILAVLLVSRGQRRLRA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HDERLNATHCQYNFPQVGRTALRVLQLVAGFLLPLLVMAYCYAHILAVLLVSRGQRRLRA
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB8 MRLVVVVVVAFALCWTPYHLVVLVDILMDLGALARNCGRESRVDVAKSVTSGLGYMHCCL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MRLVVVVVVAFALCWTPYHLVVLVDILMDLGALARNCGRESRVDVAKSVTSGLGYMHCCL
              310       320       330       340       350       360

              370       380       390       400       410     
pF1KB8 NPLLYAFVGVKFRERMWMLLLRLGCPNQRGLQRQPSSSRRDSSWSETSEASYSGL
       :::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NPLLYAFVGVKFRERMWMLLLRLGCPNQRGLQRQPSSSRRDSSWSETSEASYSGL
              370       380       390       400       410     

>>XP_016884924 (OMIM: 300574) PREDICTED: C-X-C chemokine  (415 aa)
 initn: 2769 init1: 2769 opt: 2769  Z-score: 2938.0  bits: 552.6 E(85289): 6.5e-157
Smith-Waterman score: 2769; 100.0% identity (100.0% similar) in 415 aa overlap (1-415:1-415)

               10        20        30        40        50        60
pF1KB8 MELRKYGPGRLAGTVIGGAAQSKSQTKSDSITKEFLPGLYTAPSSPFPPSQVSDHQVLND
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MELRKYGPGRLAGTVIGGAAQSKSQTKSDSITKEFLPGLYTAPSSPFPPSQVSDHQVLND
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 AEVAALLENFSSSYDYGENESDSCCTSPPCPQDFSLNFDRAFLPALYSLLFLLGLLGNGA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AEVAALLENFSSSYDYGENESDSCCTSPPCPQDFSLNFDRAFLPALYSLLFLLGLLGNGA
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB8 VAAVLLSRRTALSSTDTFLLHLAVADTLLVLTLPLWAVDAAVQWVFGSGLCKVAGALFNI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VAAVLLSRRTALSSTDTFLLHLAVADTLLVLTLPLWAVDAAVQWVFGSGLCKVAGALFNI
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB8 NFYAGALLLACISFDRYLNIVHATQLYRRGPPARVTLTCLAVWGLCLLFALPDFIFLSAH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NFYAGALLLACISFDRYLNIVHATQLYRRGPPARVTLTCLAVWGLCLLFALPDFIFLSAH
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB8 HDERLNATHCQYNFPQVGRTALRVLQLVAGFLLPLLVMAYCYAHILAVLLVSRGQRRLRA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HDERLNATHCQYNFPQVGRTALRVLQLVAGFLLPLLVMAYCYAHILAVLLVSRGQRRLRA
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB8 MRLVVVVVVAFALCWTPYHLVVLVDILMDLGALARNCGRESRVDVAKSVTSGLGYMHCCL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MRLVVVVVVAFALCWTPYHLVVLVDILMDLGALARNCGRESRVDVAKSVTSGLGYMHCCL
              310       320       330       340       350       360

              370       380       390       400       410     
pF1KB8 NPLLYAFVGVKFRERMWMLLLRLGCPNQRGLQRQPSSSRRDSSWSETSEASYSGL
       :::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NPLLYAFVGVKFRERMWMLLLRLGCPNQRGLQRQPSSSRRDSSWSETSEASYSGL
              370       380       390       400       410     

>>XP_005262313 (OMIM: 300574) PREDICTED: C-X-C chemokine  (378 aa)
 initn: 2441 init1: 2441 opt: 2465  Z-score: 2616.7  bits: 493.0 E(85289): 5.2e-139
Smith-Waterman score: 2465; 97.4% identity (98.4% similar) in 380 aa overlap (36-415:1-378)

          10        20        30        40        50        60     
pF1KB8 YGPGRLAGTVIGGAAQSKSQTKSDSITKEFLPGLYTAPSSPFPPSQVSDHQVLNDAEVAA
                                     .:::  .:.::   . ::::::::::::::
XP_005                               MPGLAHSPGSP--QGWVSDHQVLNDAEVAA
                                             10          20        

          70        80        90       100       110       120     
pF1KB8 LLENFSSSYDYGENESDSCCTSPPCPQDFSLNFDRAFLPALYSLLFLLGLLGNGAVAAVL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LLENFSSSYDYGENESDSCCTSPPCPQDFSLNFDRAFLPALYSLLFLLGLLGNGAVAAVL
       30        40        50        60        70        80        

         130       140       150       160       170       180     
pF1KB8 LSRRTALSSTDTFLLHLAVADTLLVLTLPLWAVDAAVQWVFGSGLCKVAGALFNINFYAG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LSRRTALSSTDTFLLHLAVADTLLVLTLPLWAVDAAVQWVFGSGLCKVAGALFNINFYAG
       90       100       110       120       130       140        

         190       200       210       220       230       240     
pF1KB8 ALLLACISFDRYLNIVHATQLYRRGPPARVTLTCLAVWGLCLLFALPDFIFLSAHHDERL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ALLLACISFDRYLNIVHATQLYRRGPPARVTLTCLAVWGLCLLFALPDFIFLSAHHDERL
      150       160       170       180       190       200        

         250       260       270       280       290       300     
pF1KB8 NATHCQYNFPQVGRTALRVLQLVAGFLLPLLVMAYCYAHILAVLLVSRGQRRLRAMRLVV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 NATHCQYNFPQVGRTALRVLQLVAGFLLPLLVMAYCYAHILAVLLVSRGQRRLRAMRLVV
      210       220       230       240       250       260        

         310       320       330       340       350       360     
pF1KB8 VVVVAFALCWTPYHLVVLVDILMDLGALARNCGRESRVDVAKSVTSGLGYMHCCLNPLLY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 VVVVAFALCWTPYHLVVLVDILMDLGALARNCGRESRVDVAKSVTSGLGYMHCCLNPLLY
      270       280       290       300       310       320        

         370       380       390       400       410     
pF1KB8 AFVGVKFRERMWMLLLRLGCPNQRGLQRQPSSSRRDSSWSETSEASYSGL
       ::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 AFVGVKFRERMWMLLLRLGCPNQRGLQRQPSSSRRDSSWSETSEASYSGL
      330       340       350       360       370        

>>NP_001495 (OMIM: 300574) C-X-C chemokine receptor type  (368 aa)
 initn: 2435 init1: 2435 opt: 2435  Z-score: 2585.1  bits: 487.1 E(85289): 3e-137
Smith-Waterman score: 2435; 99.7% identity (100.0% similar) in 365 aa overlap (51-415:4-368)

               30        40        50        60        70        80
pF1KB8 QSKSQTKSDSITKEFLPGLYTAPSSPFPPSQVSDHQVLNDAEVAALLENFSSSYDYGENE
                                     .:::::::::::::::::::::::::::::
NP_001                            MVLEVSDHQVLNDAEVAALLENFSSSYDYGENE
                                          10        20        30   

               90       100       110       120       130       140
pF1KB8 SDSCCTSPPCPQDFSLNFDRAFLPALYSLLFLLGLLGNGAVAAVLLSRRTALSSTDTFLL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SDSCCTSPPCPQDFSLNFDRAFLPALYSLLFLLGLLGNGAVAAVLLSRRTALSSTDTFLL
            40        50        60        70        80        90   

              150       160       170       180       190       200
pF1KB8 HLAVADTLLVLTLPLWAVDAAVQWVFGSGLCKVAGALFNINFYAGALLLACISFDRYLNI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HLAVADTLLVLTLPLWAVDAAVQWVFGSGLCKVAGALFNINFYAGALLLACISFDRYLNI
           100       110       120       130       140       150   

              210       220       230       240       250       260
pF1KB8 VHATQLYRRGPPARVTLTCLAVWGLCLLFALPDFIFLSAHHDERLNATHCQYNFPQVGRT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VHATQLYRRGPPARVTLTCLAVWGLCLLFALPDFIFLSAHHDERLNATHCQYNFPQVGRT
           160       170       180       190       200       210   

              270       280       290       300       310       320
pF1KB8 ALRVLQLVAGFLLPLLVMAYCYAHILAVLLVSRGQRRLRAMRLVVVVVVAFALCWTPYHL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ALRVLQLVAGFLLPLLVMAYCYAHILAVLLVSRGQRRLRAMRLVVVVVVAFALCWTPYHL
           220       230       240       250       260       270   

              330       340       350       360       370       380
pF1KB8 VVLVDILMDLGALARNCGRESRVDVAKSVTSGLGYMHCCLNPLLYAFVGVKFRERMWMLL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VVLVDILMDLGALARNCGRESRVDVAKSVTSGLGYMHCCLNPLLYAFVGVKFRERMWMLL
           280       290       300       310       320       330   

              390       400       410     
pF1KB8 LRLGCPNQRGLQRQPSSSRRDSSWSETSEASYSGL
       :::::::::::::::::::::::::::::::::::
NP_001 LRLGCPNQRGLQRQPSSSRRDSSWSETSEASYSGL
           340       350       360        

>>XP_005262314 (OMIM: 300574) PREDICTED: C-X-C chemokine  (278 aa)
 initn: 1405 init1: 1385 opt: 1409  Z-score: 1500.2  bits: 286.0 E(85289): 8e-77
Smith-Waterman score: 1409; 95.5% identity (97.3% similar) in 221 aa overlap (36-256:1-219)

          10        20        30        40        50        60     
pF1KB8 YGPGRLAGTVIGGAAQSKSQTKSDSITKEFLPGLYTAPSSPFPPSQVSDHQVLNDAEVAA
                                     .:::  .:.::   . ::::::::::::::
XP_005                               MPGLAHSPGSP--QGWVSDHQVLNDAEVAA
                                             10          20        

          70        80        90       100       110       120     
pF1KB8 LLENFSSSYDYGENESDSCCTSPPCPQDFSLNFDRAFLPALYSLLFLLGLLGNGAVAAVL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LLENFSSSYDYGENESDSCCTSPPCPQDFSLNFDRAFLPALYSLLFLLGLLGNGAVAAVL
       30        40        50        60        70        80        

         130       140       150       160       170       180     
pF1KB8 LSRRTALSSTDTFLLHLAVADTLLVLTLPLWAVDAAVQWVFGSGLCKVAGALFNINFYAG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LSRRTALSSTDTFLLHLAVADTLLVLTLPLWAVDAAVQWVFGSGLCKVAGALFNINFYAG
       90       100       110       120       130       140        

         190       200       210       220       230       240     
pF1KB8 ALLLACISFDRYLNIVHATQLYRRGPPARVTLTCLAVWGLCLLFALPDFIFLSAHHDERL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 ALLLACISFDRYLNIVHATQLYRRGPPARVTLTCLAVWGLCLLFALPDFIFLSAHHDERL
      150       160       170       180       190       200        

         250       260       270       280       290       300     
pF1KB8 NATHCQYNFPQVGRTALRVLQLVAGFLLPLLVMAYCYAHILAVLLVSRGQRRLRAMRLVV
       :::::::::::                                                 
XP_005 NATHCQYNFPQGSSSGSGCGCCSCAWAAPTREGSRGSHRLPAGIHPGLRPQRPPTRACEA
      210       220       230       240       250       260        

>>XP_016884925 (OMIM: 300574) PREDICTED: C-X-C chemokine  (268 aa)
 initn: 1399 init1: 1379 opt: 1379  Z-score: 1468.7  bits: 280.1 E(85289): 4.6e-75
Smith-Waterman score: 1379; 99.5% identity (100.0% similar) in 206 aa overlap (51-256:4-209)

               30        40        50        60        70        80
pF1KB8 QSKSQTKSDSITKEFLPGLYTAPSSPFPPSQVSDHQVLNDAEVAALLENFSSSYDYGENE
                                     .:::::::::::::::::::::::::::::
XP_016                            MVLEVSDHQVLNDAEVAALLENFSSSYDYGENE
                                          10        20        30   

               90       100       110       120       130       140
pF1KB8 SDSCCTSPPCPQDFSLNFDRAFLPALYSLLFLLGLLGNGAVAAVLLSRRTALSSTDTFLL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 SDSCCTSPPCPQDFSLNFDRAFLPALYSLLFLLGLLGNGAVAAVLLSRRTALSSTDTFLL
            40        50        60        70        80        90   

              150       160       170       180       190       200
pF1KB8 HLAVADTLLVLTLPLWAVDAAVQWVFGSGLCKVAGALFNINFYAGALLLACISFDRYLNI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HLAVADTLLVLTLPLWAVDAAVQWVFGSGLCKVAGALFNINFYAGALLLACISFDRYLNI
           100       110       120       130       140       150   

              210       220       230       240       250       260
pF1KB8 VHATQLYRRGPPARVTLTCLAVWGLCLLFALPDFIFLSAHHDERLNATHCQYNFPQVGRT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::    
XP_016 VHATQLYRRGPPARVTLTCLAVWGLCLLFALPDFIFLSAHHDERLNATHCQYNFPQGSSS
           160       170       180       190       200       210   

              270       280       290       300       310       320
pF1KB8 ALRVLQLVAGFLLPLLVMAYCYAHILAVLLVSRGQRRLRAMRLVVVVVVAFALCWTPYHL
                                                                   
XP_016 GSGCGCCSCAWAAPTREGSRGSHRLPAGIHPGLRPQRPPTRACEAGIRAPLSPTV     
           220       230       240       250       260             

>>NP_001707 (OMIM: 601613) C-X-C chemokine receptor type  (372 aa)
 initn: 788 init1: 444 opt: 845  Z-score: 901.5  bits: 175.6 E(85289): 1.8e-43
Smith-Waterman score: 845; 40.9% identity (68.3% similar) in 357 aa overlap (67-411:14-367)

         40        50        60        70        80         90     
pF1KB8 PGLYTAPSSPFPPSQVSDHQVLNDAEVAALLENFSSSYDYGENESD-SCCTSPPCPQD--
                                     ::..    :  .: .: :   .  ::    
NP_001                  MNYPLTLEMDLENLEDLFWELDRLDNYNDTSLVENHLCPATEG
                                10        20        30        40   

            100       110       120       130       140       150  
pF1KB8 -FSLNFDRAFLPALYSLLFLLGLLGNGAVAAVLLSRRTALSSTDTFLLHLAVADTLLVLT
        .  .:  .:.:. :::.::::..::  : ..:  .: . :::.:::.:::::: :::. 
NP_001 PLMASFKAVFVPVAYSLIFLLGVIGNVLVLVILERHRQTRSSTETFLFHLAVADLLLVFI
            50        60        70        80        90       100   

            160       170       180       190       200       210  
pF1KB8 LPLWAVDAAVQWVFGSGLCKVAGALFNINFYAGALLLACISFDRYLNIVHATQLYRRGPP
       ::. .....: ::.:. :::.. :: ..::: ..::::::. :::: ::::.. ::.   
NP_001 LPFAVAEGSVGWVLGTFLCKTVIALHKVNFYCSSLLLACIAVDRYLAIVHAVHAYRHRRL
           110       120       130       140       150       160   

            220       230          240       250       260         
pF1KB8 ARVTLTCLAVWGLCLLFALPDFIFLSA---HHDERLNATHCQYNFPQVGRT----ALRVL
         . .:: ..: . .:.:::...: ..   ::.. :   .: ..  . ..:    . : :
NP_001 LSIHITCGTIWLVGFLLALPEILFAKVSQGHHNNSL--PRCTFSQENQAETHAWFTSRFL
           170       180       190         200       210       220 

         270       280        290       300       310       320    
pF1KB8 QLVAGFLLPLLVMAYCYAHILAVL-LVSRGQRRLRAMRLVVVVVVAFALCWTPYHLVVLV
         :::::::.:::..::. ..  :  ..:  .: .:.:....:.  : :::.:::.:...
NP_001 YHVAGFLLPMLVMGWCYVGVVHRLRQAQRRPQRQKAVRVAILVTSIFFLCWSPYHIVIFL
             230       240       250       260       270       280 

          330       340       350       360       370       380    
pF1KB8 DILMDLGALARNCGRESRVDVAKSVTSGLGYMHCCLNPLLYAFVGVKFRERMWMLLLRLG
       : :  : :.  .:  .. . :: ..   ::  ::::::.::.:.:::::  .  :: .::
NP_001 DTLARLKAVDNTCKLNGSLPVAITMCEFLGLAHCCLNPMLYTFAGVKFRSDLSRLLTKLG
             290       300       310       320       330       340 

          390       400       410      
pF1KB8 CPNQRGLQRQPSSSRRDSSWSETSEASYSGL 
       : .  .: .   : :: :: ::. .:.     
NP_001 CTGPASLCQLFPSWRR-SSLSESENATSLTTF
             350        360       370  

>>NP_116743 (OMIM: 601613) C-X-C chemokine receptor type  (327 aa)
 initn: 788 init1: 444 opt: 835  Z-score: 891.6  bits: 173.6 E(85289): 6.3e-43
Smith-Waterman score: 835; 42.7% identity (71.2% similar) in 323 aa overlap (97-411:3-322)

         70        80        90       100       110       120      
pF1KB8 LENFSSSYDYGENESDSCCTSPPCPQDFSLNFDRAFLPALYSLLFLLGLLGNGAVAAVLL
                                     .:  .:.:. :::.::::..::  : ..: 
NP_116                             MASFKAVFVPVAYSLIFLLGVIGNVLVLVILE
                                           10        20        30  

        130       140       150       160       170       180      
pF1KB8 SRRTALSSTDTFLLHLAVADTLLVLTLPLWAVDAAVQWVFGSGLCKVAGALFNINFYAGA
        .: . :::.:::.:::::: :::. ::. .....: ::.:. :::.. :: ..::: ..
NP_116 RHRQTRSSTETFLFHLAVADLLLVFILPFAVAEGSVGWVLGTFLCKTVIALHKVNFYCSS
             40        50        60        70        80        90  

        190       200       210       220       230          240   
pF1KB8 LLLACISFDRYLNIVHATQLYRRGPPARVTLTCLAVWGLCLLFALPDFIFLSA---HHDE
       ::::::. :::: ::::.. ::.     . .:: ..: . .:.:::...: ..   ::..
NP_116 LLLACIAVDRYLAIVHAVHAYRHRRLLSIHITCGTIWLVGFLLALPEILFAKVSQGHHNN
            100       110       120       130       140       150  

           250       260           270       280        290        
pF1KB8 RLNATHCQYNFPQVGRT----ALRVLQLVAGFLLPLLVMAYCYAHILAVL-LVSRGQRRL
        :   .: ..  . ..:    . : :  :::::::.:::..::. ..  :  ..:  .: 
NP_116 SL--PRCTFSQENQAETHAWFTSRFLYHVAGFLLPMLVMGWCYVGVVHRLRQAQRRPQRQ
              160       170       180       190       200       210

      300       310       320       330       340       350        
pF1KB8 RAMRLVVVVVVAFALCWTPYHLVVLVDILMDLGALARNCGRESRVDVAKSVTSGLGYMHC
       .:.:....:.  : :::.:::.:...: :  : :.  .:  .. . :: ..   ::  ::
NP_116 KAVRVAILVTSIFFLCWSPYHIVIFLDTLARLKAVDNTCKLNGSLPVAITMCEFLGLAHC
              220       230       240       250       260       270

      360       370       380       390       400       410      
pF1KB8 CLNPLLYAFVGVKFRERMWMLLLRLGCPNQRGLQRQPSSSRRDSSWSETSEASYSGL 
       ::::.::.:.:::::  .  :: .::: .  .: .   : :: :: ::. .:.     
NP_116 CLNPMLYTFAGVKFRSDLSRLLTKLGCTGPASLCQLFPSWRR-SSLSESENATSLTTF
              280       290       300       310        320       

>>NP_001548 (OMIM: 146928) C-X-C chemokine receptor type  (360 aa)
 initn: 829 init1: 388 opt: 827  Z-score: 882.7  bits: 172.1 E(85289): 2e-42
Smith-Waterman score: 827; 40.6% identity (68.5% similar) in 340 aa overlap (72-408:21-357)

              50        60        70        80        90       100 
pF1KB8 APSSPFPPSQVSDHQVLNDAEVAALLENFSSSYDYGENESDSCCTSPPCPQDFSLNFDRA
                                     :.:.:. .       . ::  . ::.... 
NP_001           MEDFNMESDSFEDFWKGEDLSNYSYSSTLPPFLLDAAPCEPE-SLEINKY
                         10        20        30        40          

             110       120       130       140       150       160 
pF1KB8 FLPALYSLLFLLGLLGNGAVAAVLLSRRTALSSTDTFLLHLAVADTLLVLTLPLWAVDAA
       :.  .:.:.:::.::::. :  :.:  :.. : ::..::.::.:: :..::::.::.. .
NP_001 FVVIIYALVFLLSLLGNSLVMLVILYSRVGRSVTDVYLLNLALADLLFALTLPIWAASKV
      50        60        70        80        90       100         

             170       180       190       200       210       220 
pF1KB8 VQWVFGSGLCKVAGALFNINFYAGALLLACISFDRYLNIVHATQLYRRGPPARVTLTCLA
         :.::. ::::.. : ..:::.: ::::::: :::: :::::.   .     : . ::.
NP_001 NGWIFGTFLCKVVSLLKEVNFYSGILLLACISVDRYLAIVHATRTLTQ-KRYLVKFICLS
     110       120       130       140       150        160        

             230       240       250          260       270        
pF1KB8 VWGLCLLFALPDFIFLSAHHDERLNATHCQYNFPQVG---RTALRVLQLVAGFLLPLLVM
       .::: ::.::: ..:  . ..  .. . :  .. .     :  ::.:    ::..:::.:
NP_001 IWGLSLLLALPVLLFRRTVYSSNVSPA-CYEDMGNNTANWRMLLRILPQSFGFIVPLLIM
      170       180       190        200       210       220       

      280       290       300       310       320       330        
pF1KB8 AYCYAHILAVLLVSRGQRRLRAMRLVVVVVVAFALCWTPYHLVVLVDILMDLGALARNCG
        .::.  : .:. ..  .. ::::.. .::. : ::: ::.::.:.: ::   .. ..: 
NP_001 LFCYGFTLRTLFKAHMGQKHRAMRVIFAVVLIFLLCWLPYNLVLLADTLMRTQVIQETCE
       230       240       250       260       270       280       

      340       350       360       370       380       390        
pF1KB8 RESRVDVAKSVTSGLGYMHCCLNPLLYAFVGVKFRERMWMLLLRLGCPNQRGLQRQPSSS
       :....: : ..:  :: .: :::::.:::.: :::. .  .:   :  .. .: ..   :
NP_001 RRNHIDRALDATEILGILHSCLNPLIYAFIGQKFRHGLLKILAIHGLISKDSLPKDSRPS
       290       300       310       320       330       340       

      400       410     
pF1KB8 RRDSSWSETSEASYSGL
          :: ..::       
NP_001 FVGSSSGHTSTTL    
       350       360    

>>XP_016859481 (OMIM: 146928) PREDICTED: C-X-C chemokine  (360 aa)
 initn: 829 init1: 388 opt: 827  Z-score: 882.7  bits: 172.1 E(85289): 2e-42
Smith-Waterman score: 827; 40.6% identity (68.5% similar) in 340 aa overlap (72-408:21-357)

              50        60        70        80        90       100 
pF1KB8 APSSPFPPSQVSDHQVLNDAEVAALLENFSSSYDYGENESDSCCTSPPCPQDFSLNFDRA
                                     :.:.:. .       . ::  . ::.... 
XP_016           MEDFNMESDSFEDFWKGEDLSNYSYSSTLPPFLLDAAPCEPE-SLEINKY
                         10        20        30        40          

             110       120       130       140       150       160 
pF1KB8 FLPALYSLLFLLGLLGNGAVAAVLLSRRTALSSTDTFLLHLAVADTLLVLTLPLWAVDAA
       :.  .:.:.:::.::::. :  :.:  :.. : ::..::.::.:: :..::::.::.. .
XP_016 FVVIIYALVFLLSLLGNSLVMLVILYSRVGRSVTDVYLLNLALADLLFALTLPIWAASKV
      50        60        70        80        90       100         

             170       180       190       200       210       220 
pF1KB8 VQWVFGSGLCKVAGALFNINFYAGALLLACISFDRYLNIVHATQLYRRGPPARVTLTCLA
         :.::. ::::.. : ..:::.: ::::::: :::: :::::.   .     : . ::.
XP_016 NGWIFGTFLCKVVSLLKEVNFYSGILLLACISVDRYLAIVHATRTLTQ-KRYLVKFICLS
     110       120       130       140       150        160        

             230       240       250          260       270        
pF1KB8 VWGLCLLFALPDFIFLSAHHDERLNATHCQYNFPQVG---RTALRVLQLVAGFLLPLLVM
       .::: ::.::: ..:  . ..  .. . :  .. .     :  ::.:    ::..:::.:
XP_016 IWGLSLLLALPVLLFRRTVYSSNVSPA-CYEDMGNNTANWRMLLRILPQSFGFIVPLLIM
      170       180       190        200       210       220       

      280       290       300       310       320       330        
pF1KB8 AYCYAHILAVLLVSRGQRRLRAMRLVVVVVVAFALCWTPYHLVVLVDILMDLGALARNCG
        .::.  : .:. ..  .. ::::.. .::. : ::: ::.::.:.: ::   .. ..: 
XP_016 LFCYGFTLRTLFKAHMGQKHRAMRVIFAVVLIFLLCWLPYNLVLLADTLMRTQVIQETCE
       230       240       250       260       270       280       

      340       350       360       370       380       390        
pF1KB8 RESRVDVAKSVTSGLGYMHCCLNPLLYAFVGVKFRERMWMLLLRLGCPNQRGLQRQPSSS
       :....: : ..:  :: .: :::::.:::.: :::. .  .:   :  .. .: ..   :
XP_016 RRNHIDRALDATEILGILHSCLNPLIYAFIGQKFRHGLLKILAIHGLISKDSLPKDSRPS
       290       300       310       320       330       340       

      400       410     
pF1KB8 RRDSSWSETSEASYSGL
          :: ..::       
XP_016 FVGSSSGHTSTTL    
       350       360    




415 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 15:53:55 2016 done: Fri Nov  4 15:53:56 2016
 Total Scan time:  9.490 Total Display time:  0.030

Function used was FASTA [36.3.4 Apr, 2011]
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