Result of FASTA (omim) for pF1KB8820
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB8820, 384 aa
  1>>>pF1KB8820 384 - 384 aa - 384 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 4.8824+/-0.000432; mu= 19.3441+/- 0.027
 mean_var=90.6406+/-20.529, 0's: 0 Z-trim(110.5): 589  B-trim: 989 in 1/55
 Lambda= 0.134714
 statistics sampled from 18225 (18901) to 18225 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.578), E-opt: 0.2 (0.222), width:  16
 Scan time:  8.380

The best scores are:                                      opt bits E(85289)
NP_001287 (OMIM: 602648) atypical chemokine recept ( 384) 2555 507.3 2.4e-143
XP_016861176 (OMIM: 604836) PREDICTED: C-C chemoki ( 360)  888 183.3 7.7e-46
NP_005499 (OMIM: 604836) C-C chemokine receptor ty ( 360)  888 183.3 7.7e-46
NP_001286 (OMIM: 601159) C-C chemokine receptor ty ( 355)  839 173.8 5.6e-43
NP_001116868 (OMIM: 601267) C-C chemokine receptor ( 360)  798 165.8 1.4e-40
XP_011532371 (OMIM: 601267) PREDICTED: C-C chemoki ( 360)  798 165.8 1.4e-40
NP_001158152 (OMIM: 601268) C-C chemokine receptor ( 373)  783 162.9 1.1e-39
NP_005192 (OMIM: 601834) C-C chemokine receptor ty ( 355)  782 162.7 1.2e-39
XP_006713023 (OMIM: 601268) PREDICTED: C-C chemoki ( 355)  782 162.7 1.2e-39
NP_001828 (OMIM: 601268) C-C chemokine receptor ty ( 355)  782 162.7 1.2e-39
NP_847899 (OMIM: 601268) C-C chemokine receptor ty ( 355)  782 162.7 1.2e-39
XP_011531637 (OMIM: 601268) PREDICTED: C-C chemoki ( 355)  782 162.7 1.2e-39
NP_001116513 (OMIM: 601267) C-C chemokine receptor ( 374)  782 162.7 1.3e-39
NP_847898 (OMIM: 601268) C-C chemokine receptor ty ( 376)  782 162.7 1.3e-39
XP_016861175 (OMIM: 601268) PREDICTED: C-C chemoki ( 410)  782 162.8 1.3e-39
XP_016861174 (OMIM: 601268) PREDICTED: C-C chemoki ( 410)  782 162.8 1.3e-39
NP_000570 (OMIM: 601373,609532,610379,612522) C-C  ( 352)  766 159.6   1e-38
NP_001093638 (OMIM: 601373,609532,610379,612522) C ( 352)  766 159.6   1e-38
XP_016859481 (OMIM: 146928) PREDICTED: C-X-C chemo ( 360)  734 153.4 7.9e-37
XP_005246587 (OMIM: 146928) PREDICTED: C-X-C chemo ( 360)  734 153.4 7.9e-37
NP_001161770 (OMIM: 146928) C-X-C chemokine recept ( 360)  734 153.4 7.9e-37
XP_016859479 (OMIM: 146928) PREDICTED: C-X-C chemo ( 360)  734 153.4 7.9e-37
NP_001548 (OMIM: 146928) C-X-C chemokine receptor  ( 360)  734 153.4 7.9e-37
XP_016859480 (OMIM: 146928) PREDICTED: C-X-C chemo ( 360)  734 153.4 7.9e-37
NP_001328 (OMIM: 601470,607339,609423,613784) CX3C ( 355)  731 152.8 1.2e-36
NP_001164642 (OMIM: 601470,607339,609423,613784) C ( 355)  731 152.8 1.2e-36
NP_001164643 (OMIM: 601470,607339,609423,613784) C ( 355)  731 152.8 1.2e-36
NP_001495 (OMIM: 300574) C-X-C chemokine receptor  ( 368)  731 152.8 1.2e-36
XP_005262313 (OMIM: 300574) PREDICTED: C-X-C chemo ( 378)  731 152.8 1.2e-36
NP_001164645 (OMIM: 601470,607339,609423,613784) C ( 387)  731 152.8 1.2e-36
XP_016884924 (OMIM: 300574) PREDICTED: C-X-C chemo ( 415)  731 152.9 1.3e-36
NP_001136269 (OMIM: 300574) C-X-C chemokine recept ( 415)  731 152.9 1.3e-36
NP_113597 (OMIM: 601835) C-C chemokine receptor ty ( 374)  726 151.9 2.4e-36
NP_004358 (OMIM: 601835) C-C chemokine receptor ty ( 374)  726 151.9 2.4e-36
NP_112477 (OMIM: 604738) C-C chemokine receptor ty ( 369)  722 151.1   4e-36
XP_011531614 (OMIM: 604738) PREDICTED: C-C chemoki ( 369)  722 151.1   4e-36
NP_001243298 (OMIM: 604738) C-C chemokine receptor ( 357)  705 147.8 3.9e-35
NP_006632 (OMIM: 604738) C-C chemokine receptor ty ( 357)  705 147.8 3.9e-35
NP_000625 (OMIM: 146929,609423) C-X-C chemokine re ( 350)  696 146.0 1.3e-34
NP_001008540 (OMIM: 162643,193670) C-X-C chemokine ( 356)  688 144.4 3.8e-34
NP_003458 (OMIM: 162643,193670) C-X-C chemokine re ( 352)  683 143.5 7.5e-34
NP_057641 (OMIM: 606065) atypical chemokine recept ( 350)  679 142.7 1.3e-33
NP_848540 (OMIM: 606065) atypical chemokine recept ( 350)  679 142.7 1.3e-33
NP_001288647 (OMIM: 600242) C-C chemokine receptor ( 372)  668 140.6 5.8e-33
NP_001288646 (OMIM: 600242) C-C chemokine receptor ( 372)  668 140.6 5.8e-33
NP_001288645 (OMIM: 600242) C-C chemokine receptor ( 372)  668 140.6 5.8e-33
NP_001829 (OMIM: 600242) C-C chemokine receptor ty ( 378)  668 140.6 5.9e-33
NP_116743 (OMIM: 601613) C-X-C chemokine receptor  ( 327)  619 131.0 3.9e-30
NP_001707 (OMIM: 601613) C-X-C chemokine receptor  ( 372)  619 131.1 4.3e-30
NP_001288643 (OMIM: 600242) C-C chemokine receptor ( 315)  612 129.6 9.9e-30


>>NP_001287 (OMIM: 602648) atypical chemokine receptor 2  (384 aa)
 initn: 2555 init1: 2555 opt: 2555  Z-score: 2694.6  bits: 507.3 E(85289): 2.4e-143
Smith-Waterman score: 2555; 99.7% identity (99.7% similar) in 384 aa overlap (1-384:1-384)

               10        20        30        40        50        60
pF1KB8 MAATASPQPLATEDADSENSSFYYYDYLDEVAFMLCRKDAVVSFGKVFLPVFYSLIFVLG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MAATASPQPLATEDADSENSSFYYYDYLDEVAFMLCRKDAVVSFGKVFLPVFYSLIFVLG
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 LSGNLLLLMVLLRYVPRRRMVEIYLLNLAISNLLFLVTLPFWGISVAWHWVFGSFLCKMV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LSGNLLLLMVLLRYVPRRRMVEIYLLNLAISNLLFLVTLPFWGISVAWHWVFGSFLCKMV
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB8 STLYTINFYSGIFFISCMSLDKYLEIVHAQPYHRLRTRAKSLLLATIVWAVSLAVSIPDM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 STLYTINFYSGIFFISCMSLDKYLEIVHAQPYHRLRTRAKSLLLATIVWAVSLAVSIPDM
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB8 VFVQTHENPKGVWNCHADFGGHGTIWKLFLRFQQNLLGFLLPLLAMIFFYSRIGCVLVRL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VFVQTHENPKGVWNCHADFGGHGTIWKLFLRFQQNLLGFLLPLLAMIFFYSRIGCVLVRL
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB8 RPAGQGRALKIAAALVVAFFVLWFPYNLTLFLHTLLDLQVFGNCEVSQHLDYALQVTESI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RPAGQGRALKIAAALVVAFFVLWFPYNLTLFLHTLLDLQVFGNCEVSQHLDYALQVTESI
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KB8 AFLHCCFSPILYAFSSHRFRQYLKAFLAAVLGWHLAPGTAQASLSSCSESSILTAQEEMT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 AFLHCCFSPILYAFSSHRFRQYLKAFLAAVLGWHLAPGTAQASLSSCSESSILTAQEEMT
              310       320       330       340       350       360

              370       380    
pF1KB8 GMNDLGERQSENSPNKEDVGNKSA
       :::::::::::: :::::::::::
NP_001 GMNDLGERQSENYPNKEDVGNKSA
              370       380    

>>XP_016861176 (OMIM: 604836) PREDICTED: C-C chemokine r  (360 aa)
 initn: 821 init1: 468 opt: 888  Z-score: 944.0  bits: 183.3 E(85289): 7.7e-46
Smith-Waterman score: 888; 41.3% identity (73.6% similar) in 322 aa overlap (12-332:4-324)

               10         20        30        40        50         
pF1KB8 MAATASPQPLATEDADSE-NSSFYYYDYLDEVAFMLCRKDAVVSFGKVFLPVFYSLIFVL
                  :. ::.  . :.:   :: :     : :... .::..::: .:::.::.
XP_016         MNPTDIADTTLDESIYSNYYLYESIPKPCTKEGIKAFGELFLPPLYSLVFVF
                       10        20        30        40        50  

      60        70        80        90       100       110         
pF1KB8 GLSGNLLLLMVLLRYVPRRRMVEIYLLNLAISNLLFLVTLPFWGISVAWHWVFGSFLCKM
       :: :: ....::..:   : :...::::::::.:::. .:::::  .: .::::  ::::
XP_016 GLLGNSVVVLVLFKYKRLRSMTDVYLLNLAISDLLFVFSLPFWGYYAADQWVFGLGLCKM
             60        70        80        90       100       110  

     120       130       140       150       160       170         
pF1KB8 VSTLYTINFYSGIFFISCMSLDKYLEIVHAQPYHRLRTRAKSLLLATIVWAVSLAVSIPD
       .: .: ..:::::::.  ::.:.:: ::::    : :: . ... .  .:.:.. .:.: 
XP_016 ISWMYLVGFYSGIFFVMLMSIDRYLAIVHAVFSLRARTLTYGVITSLATWSVAVFASLPG
            120       130       140       150       160       170  

     180       190       200       210       220       230         
pF1KB8 MVFVQTHENPKGVWNCHADFGGHGTIWKLFLRFQQNLLGFLLPLLAMIFFYSRIGCVLVR
       ..:   . . . .. :.. .. ..: ::..  .. :.::...::  :.: :: :  .: .
XP_016 FLFSTCYTERNHTY-CKTKYSLNSTTWKVLSSLEINILGLVIPLGIMLFCYSMIIRTLQH
            180        190       200       210       220       230 

     240       250       260       270       280       290         
pF1KB8 LRPAGQGRALKIAAALVVAFFVLWFPYNLTLFLHTLLDLQVFGNCEVSQHLDYALQVTES
        .   ...:.:.  :.:: :. .: :::..:::.::..:.:. .:   ..::::.:.::.
XP_016 CKNEKKNKAVKMIFAVVVLFLGFWTPYNIVLFLETLVELEVLQDCTFERYLDYAIQATET
             240       250       260       270       280       290 

     300       310       320       330       340       350         
pF1KB8 IAFLHCCFSPILYAFSSHRFRQYLKAFLAAVLGWHLAPGTAQASLSSCSESSILTAQEEM
       .::.:::..::.: : ...::.:.  .. .  :                           
XP_016 LAFVHCCLNPIIYFFLGEKFRKYILQLFKTCRGLFVLCQYCGLLQIYSADTPSSSYTQST
             300       310       320       330       340       350 

     360       370       380    
pF1KB8 TGMNDLGERQSENSPNKEDVGNKSA
                                
XP_016 MDHDLHDAL                
             360                

>>NP_005499 (OMIM: 604836) C-C chemokine receptor type 4  (360 aa)
 initn: 821 init1: 468 opt: 888  Z-score: 944.0  bits: 183.3 E(85289): 7.7e-46
Smith-Waterman score: 888; 41.3% identity (73.6% similar) in 322 aa overlap (12-332:4-324)

               10         20        30        40        50         
pF1KB8 MAATASPQPLATEDADSE-NSSFYYYDYLDEVAFMLCRKDAVVSFGKVFLPVFYSLIFVL
                  :. ::.  . :.:   :: :     : :... .::..::: .:::.::.
NP_005         MNPTDIADTTLDESIYSNYYLYESIPKPCTKEGIKAFGELFLPPLYSLVFVF
                       10        20        30        40        50  

      60        70        80        90       100       110         
pF1KB8 GLSGNLLLLMVLLRYVPRRRMVEIYLLNLAISNLLFLVTLPFWGISVAWHWVFGSFLCKM
       :: :: ....::..:   : :...::::::::.:::. .:::::  .: .::::  ::::
NP_005 GLLGNSVVVLVLFKYKRLRSMTDVYLLNLAISDLLFVFSLPFWGYYAADQWVFGLGLCKM
             60        70        80        90       100       110  

     120       130       140       150       160       170         
pF1KB8 VSTLYTINFYSGIFFISCMSLDKYLEIVHAQPYHRLRTRAKSLLLATIVWAVSLAVSIPD
       .: .: ..:::::::.  ::.:.:: ::::    : :: . ... .  .:.:.. .:.: 
NP_005 ISWMYLVGFYSGIFFVMLMSIDRYLAIVHAVFSLRARTLTYGVITSLATWSVAVFASLPG
            120       130       140       150       160       170  

     180       190       200       210       220       230         
pF1KB8 MVFVQTHENPKGVWNCHADFGGHGTIWKLFLRFQQNLLGFLLPLLAMIFFYSRIGCVLVR
       ..:   . . . .. :.. .. ..: ::..  .. :.::...::  :.: :: :  .: .
NP_005 FLFSTCYTERNHTY-CKTKYSLNSTTWKVLSSLEINILGLVIPLGIMLFCYSMIIRTLQH
            180        190       200       210       220       230 

     240       250       260       270       280       290         
pF1KB8 LRPAGQGRALKIAAALVVAFFVLWFPYNLTLFLHTLLDLQVFGNCEVSQHLDYALQVTES
        .   ...:.:.  :.:: :. .: :::..:::.::..:.:. .:   ..::::.:.::.
NP_005 CKNEKKNKAVKMIFAVVVLFLGFWTPYNIVLFLETLVELEVLQDCTFERYLDYAIQATET
             240       250       260       270       280       290 

     300       310       320       330       340       350         
pF1KB8 IAFLHCCFSPILYAFSSHRFRQYLKAFLAAVLGWHLAPGTAQASLSSCSESSILTAQEEM
       .::.:::..::.: : ...::.:.  .. .  :                           
NP_005 LAFVHCCLNPIIYFFLGEKFRKYILQLFKTCRGLFVLCQYCGLLQIYSADTPSSSYTQST
             300       310       320       330       340       350 

     360       370       380    
pF1KB8 TGMNDLGERQSENSPNKEDVGNKSA
                                
NP_005 MDHDLHDAL                
             360                

>>NP_001286 (OMIM: 601159) C-C chemokine receptor type 1  (355 aa)
 initn: 783 init1: 559 opt: 839  Z-score: 892.6  bits: 173.8 E(85289): 5.6e-43
Smith-Waterman score: 839; 39.6% identity (68.0% similar) in 359 aa overlap (9-360:4-352)

               10        20        30        40        50        60
pF1KB8 MAATASPQPLATEDADSENSSFYYYDYLDEVAFMLCRKDAVVSFGKVFLPVFYSLIFVLG
               : .::: :. .     .:: : .    :.:    .::  .:: .:::.::.:
NP_001      METPNTTEDYDTTTE----FDYGDATP---CQKVNERAFGAQLLPPLYSLVFVIG
                    10            20           30        40        

               70        80        90       100        110         
pF1KB8 LSGNLLLLMVLLRYVPRRRMVEIYLLNLAISNLLFLVTLPFW-GISVAWHWVFGSFLCKM
       : ::.:...::..:   . :. :::::::::.:::: :::::   ..   ::::. .::.
NP_001 LVGNILVVLVLVQYKRLKNMTSIYLLNLAISDLLFLFTLPFWIDYKLKDDWVFGDAMCKI
       50        60        70        80        90       100        

     120       130       140       150       160       170         
pF1KB8 VSTLYTINFYSGIFFISCMSLDKYLEIVHAQPYHRLRTRAKSLLLATIVWAVSLAVSIPD
       .: .:  ..:: ::::  ...:.:: ::::    : :: . ... . :.::... .:.: 
NP_001 LSGFYYTGLYSEIFFIILLTIDRYLAIVHAVFALRARTVTFGVITSIIIWALAILASMPG
      110       120       130       140       150       160        

     180       190       200         210       220       230       
pF1KB8 MVFVQTHENPKGVWNCHADFGGHGTI--WKLFLRFQQNLLGFLLPLLAMIFFYSRIGCVL
       . : .:. .     .:   :  : ..  ::::  .. ::.:..::::.::. :. :  .:
NP_001 LYFSKTQWEFTH-HTCSLHFP-HESLREWKLFQALKLNLFGLVLPLLVMIICYTGIIKIL
      170       180         190       200       210       220      

       240        250       260       270       280       290      
pF1KB8 VRLRPA-GQGRALKIAAALVVAFFVLWFPYNLTLFLHTLLDLQVFGNCEVSQHLDYALQV
       .: ::   ...:...  .... ::..: :::::... .. :.    .:: :.::: :.::
NP_001 LR-RPNEKKSKAVRLIFVIMIIFFLFWTPYNLTILISVFQDFLFTHECEQSRHLDLAVQV
         230       240       250       260       270       280     

        300       310       320       330          340       350   
pF1KB8 TESIAFLHCCFSPILYAFSSHRFRQYLKAFLAAVLGWHLA---PGTAQASLSSCSESSIL
       :: ::. ::: .:..::: ..:::.::. ..   .. ::.   :  .   :   : .:  
NP_001 TEVIAYTHCCVNPVIYAFVGERFRKYLRQLFHRRVAVHLVKWLPFLSVDRLERVSSTSPS
         290       300       310       320       330       340     

           360       370       380    
pF1KB8 TAQEEMTGMNDLGERQSENSPNKEDVGNKSA
       :...:..                        
NP_001 TGEHELSAGF                     
         350                          

>>NP_001116868 (OMIM: 601267) C-C chemokine receptor typ  (360 aa)
 initn: 682 init1: 378 opt: 798  Z-score: 849.4  bits: 165.8 E(85289): 1.4e-40
Smith-Waterman score: 798; 38.2% identity (74.4% similar) in 317 aa overlap (12-327:13-320)

                10        20        30        40        50         
pF1KB8  MAATASPQPLATEDADSENSSFYYYDYLDEVAFMLCRKDAVVSFGKVFLPVFYSLIFVL
                   :...  : ..:. :::        :.:  : ..:  .:: .:::.:..
NP_001 MLSTSRSRFIRNTNESGEEVTTFFDYDYGAP-----CHKFDVKQIGAQLLPPLYSLVFIF
               10        20        30             40        50     

      60        70        80        90       100       110         
pF1KB8 GLSGNLLLLMVLLRYVPRRRMVEIYLLNLAISNLLFLVTLPFWGISVAWHWVFGSFLCKM
       :. ::.:....:.     . ...:::::::::.::::.:::.:. :.: .::::. .::.
NP_001 GFVGNMLVVLILINCKKLKCLTDIYLLNLAISDLLFLITLPLWAHSAANEWVFGNAMCKL
          60        70        80        90       100       110     

     120       130       140       150       160       170         
pF1KB8 VSTLYTINFYSGIFFISCMSLDKYLEIVHAQPYHRLRTRAKSLLLATIVWAVSLAVSIPD
        . :: :....:::::  ...:.:: ::::    . :: . ... ..:.: :.. .:.: 
NP_001 FTGLYHIGYFGGIFFIILLTIDRYLAIVHAVFALKARTVTFGVVTSVITWLVAVFASVPG
         120       130       140       150       160       170     

     180       190       200       210       220       230         
pF1KB8 MVFVQTHENPKGVWNCHADFGGHGTIWKLFLRFQQNLLGFLLPLLAMIFFYSRIGCVLVR
       ..:.. ... . :. :   :  .:  :. :  ...:.::..:::: :.. :: :  .:.:
NP_001 IIFTKCQKEDS-VYVCGPYFP-RG--WNNFHTIMRNILGLVLPLLIMVICYSGILKTLLR
         180        190          200       210       220       230 

     240        250       260       270       280       290        
pF1KB8 LRPAGQ-GRALKIAAALVVAFFVLWFPYNLTLFLHTLLDLQVFGNCEVSQHLDYALQVTE
        :   .  ::...  ......:..: :::....:.:. ..  ..::: ...:: : ::::
NP_001 CRNEKKRHRAVRVIFTIMIVYFLFWTPYNIVILLNTFQEFFGLSNCESTSQLDQATQVTE
             240       250       260       270       280       290 

      300       310       320       330       340       350        
pF1KB8 SIAFLHCCFSPILYAFSSHRFRQYLKAFLAAVLGWHLAPGTAQASLSSCSESSILTAQEE
       .... :::..::.::: ...::.::..:.                               
NP_001 TLGMTHCCINPIIYAFVGEKFRRYLSVFFRKHITKRFCKQCPVFYRETVDGVTSTNTPST
             300       310       320       330       340       350 

>>XP_011532371 (OMIM: 601267) PREDICTED: C-C chemokine r  (360 aa)
 initn: 682 init1: 378 opt: 798  Z-score: 849.4  bits: 165.8 E(85289): 1.4e-40
Smith-Waterman score: 798; 38.2% identity (74.4% similar) in 317 aa overlap (12-327:13-320)

                10        20        30        40        50         
pF1KB8  MAATASPQPLATEDADSENSSFYYYDYLDEVAFMLCRKDAVVSFGKVFLPVFYSLIFVL
                   :...  : ..:. :::        :.:  : ..:  .:: .:::.:..
XP_011 MLSTSRSRFIRNTNESGEEVTTFFDYDYGAP-----CHKFDVKQIGAQLLPPLYSLVFIF
               10        20        30             40        50     

      60        70        80        90       100       110         
pF1KB8 GLSGNLLLLMVLLRYVPRRRMVEIYLLNLAISNLLFLVTLPFWGISVAWHWVFGSFLCKM
       :. ::.:....:.     . ...:::::::::.::::.:::.:. :.: .::::. .::.
XP_011 GFVGNMLVVLILINCKKLKCLTDIYLLNLAISDLLFLITLPLWAHSAANEWVFGNAMCKL
          60        70        80        90       100       110     

     120       130       140       150       160       170         
pF1KB8 VSTLYTINFYSGIFFISCMSLDKYLEIVHAQPYHRLRTRAKSLLLATIVWAVSLAVSIPD
        . :: :....:::::  ...:.:: ::::    . :: . ... ..:.: :.. .:.: 
XP_011 FTGLYHIGYFGGIFFIILLTIDRYLAIVHAVFALKARTVTFGVVTSVITWLVAVFASVPG
         120       130       140       150       160       170     

     180       190       200       210       220       230         
pF1KB8 MVFVQTHENPKGVWNCHADFGGHGTIWKLFLRFQQNLLGFLLPLLAMIFFYSRIGCVLVR
       ..:.. ... . :. :   :  .:  :. :  ...:.::..:::: :.. :: :  .:.:
XP_011 IIFTKCQKEDS-VYVCGPYFP-RG--WNNFHTIMRNILGLVLPLLIMVICYSGILKTLLR
         180        190          200       210       220       230 

     240        250       260       270       280       290        
pF1KB8 LRPAGQ-GRALKIAAALVVAFFVLWFPYNLTLFLHTLLDLQVFGNCEVSQHLDYALQVTE
        :   .  ::...  ......:..: :::....:.:. ..  ..::: ...:: : ::::
XP_011 CRNEKKRHRAVRVIFTIMIVYFLFWTPYNIVILLNTFQEFFGLSNCESTSQLDQATQVTE
             240       250       260       270       280       290 

      300       310       320       330       340       350        
pF1KB8 SIAFLHCCFSPILYAFSSHRFRQYLKAFLAAVLGWHLAPGTAQASLSSCSESSILTAQEE
       .... :::..::.::: ...::.::..:.                               
XP_011 TLGMTHCCINPIIYAFVGEKFRRYLSVFFRKHITKRFCKQCPVFYRETVDGVTSTNTPST
             300       310       320       330       340       350 

>>NP_001158152 (OMIM: 601268) C-C chemokine receptor typ  (373 aa)
 initn: 737 init1: 506 opt: 783  Z-score: 833.5  bits: 162.9 E(85289): 1.1e-39
Smith-Waterman score: 783; 37.0% identity (69.1% similar) in 362 aa overlap (8-360:13-370)

                    10        20          30        40        50   
pF1KB8      MAATASPQPLATEDADSENS--SFYYYDYLDEVAFMLCRKDAVVSFGKVFLPVFY
                   .:  .: . : ..  .:   .: :.:. .::.:  . ..   :.: .:
NP_001 MPFGIRMLLRAHKPGRSEMTTSLDTVETFGTTSYYDDVG-LLCEKADTRALMAQFVPPLY
               10        20        30         40        50         

            60        70        80        90       100        110  
pF1KB8 SLIFVLGLSGNLLLLMVLLRYVPRRRMVEIYLLNLAISNLLFLVTLPFWGISVAWH-WVF
       ::.:..:: ::....:.:..:   : :..:::::::::.::::::::::   :  : :::
NP_001 SLVFTVGLLGNVVVVMILIKYRRLRIMTNIYLLNLAISDLLFLVTLPFWIHYVRGHNWVF
      60        70        80        90       100       110         

            120       130       140       150       160       170  
pF1KB8 GSFLCKMVSTLYTINFYSGIFFISCMSLDKYLEIVHAQPYHRLRTRAKSLLLATIVWAVS
       :  .::..: .:  ..:: ::::  ...:.:: ::::    : :: . ... . ..:...
NP_001 GHGMCKLLSGFYHTGLYSEIFFIILLTIDRYLAIVHAVFALRARTVTFGVITSIVTWGLA
     120       130       140       150       160       170         

            180       190       200         210       220       230
pF1KB8 LAVSIPDMVFVQTHENPKGVWNCHADFGGHGTI--WKLFLRFQQNLLGFLLPLLAMIFFY
       . ...:...: .:.:  . .  : : .  . :.  :. :  ...... ..::::.: . :
NP_001 VLAALPEFIFYETEELFEETL-CSALYP-EDTVYSWRHFHTLRMTIFCLVLPLLVMAICY
     180       190       200         210       220       230       

              240       250       260       270       280          
pF1KB8 SRIGCVLVRLRPAGQGRALKIAAALVVAFFVLWFPYNLTLFLHTLLDLQVFGN-CEVSQH
       . :  .:.:     . .:...  .....::..: :::....: .  .. .::: :: :.:
NP_001 TGIIKTLLRCPSKKKYKAIRLIFVIMAVFFIFWTPYNVAILLSSYQSI-LFGNDCERSKH
       240       250       260       270       280        290      

     290       300       310       320       330          340      
pF1KB8 LDYALQVTESIAFLHCCFSPILYAFSSHRFRQYLKAFLAAVLGWHLA---PGTAQASLSS
       :: .. ::: ::. :::..:..::: ..:::.::. :.   :  ::.   :   . .:  
NP_001 LDLVMLVTEVIAYSHCCMNPVIYAFVGERFRKYLRHFFHRHLLMHLGRYIPFLPSEKLER
        300       310       320       330       340       350      

        350       360       370       380    
pF1KB8 CSESSILTAQEEMTGMNDLGERQSENSPNKEDVGNKSA
        :  :  ::. :..                        
NP_001 TSSVSPSTAEPELSIVF                     
        360       370                        

>>NP_005192 (OMIM: 601834) C-C chemokine receptor type 8  (355 aa)
 initn: 768 init1: 406 opt: 782  Z-score: 832.7  bits: 162.7 E(85289): 1.2e-39
Smith-Waterman score: 782; 35.5% identity (68.1% similar) in 332 aa overlap (20-351:13-339)

               10        20        30        40        50        60
pF1KB8 MAATASPQPLATEDADSENSSFYYYDYLDEVAFMLCRKDAVVSFGKVFLPVFYSLIFVLG
                          ...:: : ..      :  . . . ::..: ::: :.::..
NP_005        MDYTLDLSVTTVTDYYYPDIFSSP----CDAELIQTNGKLLLAVFYCLLFVFS
                      10        20            30        40         

               70        80        90       100       110       120
pF1KB8 LSGNLLLLMVLLRYVPRRRMVEIYLLNLAISNLLFLVTLPFWGISVAWHWVFGSFLCKMV
       : :: :...::.     : ....::::::.:.:::. ..::    .  .::::. .::.:
NP_005 LLGNSLVILVLVVCKKLRSITDVYLLNLALSDLLFVFSFPFQTYYLLDQWVFGTVMCKVV
      50        60        70        80        90       100         

              130       140       150       160       170       180
pF1KB8 STLYTINFYSGIFFISCMSLDKYLEIVHAQPYHRLRTRAKSLLLATIVWAVSLAVSIPDM
       : .: :.:::..:::. ::.:.:: .:::    ..::   .  :   :: ... ..:: .
NP_005 SGFYYIGFYSSMFFITLMSVDRYLAVVHAVYALKVRTIRMGTTLCLAVWLTAIMATIPLL
     110       120       130       140       150       160         

              190       200       210       220       230       240
pF1KB8 VFVQTHENPKGVWNCHADFGGHGTIWKLFLRFQQNLLGFLLPLLAMIFFYSRIGCVLVRL
       :: :.  .  :: .:.. .. .   ::.:  :..:.::.:.:.  ..: : .:   : : 
NP_005 VFYQV-ASEDGVLQCYSFYNQQTLKWKIFTNFKMNILGLLIPFTIFMFCYIKILHQLKRC
     170        180       190       200       210       220        

              250       260       270       280       290       300
pF1KB8 RPAGQGRALKIAAALVVAFFVLWFPYNLTLFLHTLLDLQVFGNCEVSQHLDYALQVTESI
       .  .. .:....  .:.: ...: :.:..::: .: ..... .: .::.: :: .::: :
NP_005 QNHNKTKAIRLVLIVVIASLLFWVPFNVVLFLTSLHSMHILDGCSISQQLTYATHVTEII
      230       240       250       260       270       280        

              310       320       330       340       350       360
pF1KB8 AFLHCCFSPILYAFSSHRFRQYLKAFLAAVLGWHLAPGTAQASLSSCSESSILTAQEEMT
       .: ::: .:..::: ...:...:. ..    .  .     :    :: .::         
NP_005 SFTHCCVNPVIYAFVGEKFKKHLSEIFQKSCSQIFNYLGRQMPRESCEKSSSCQQHSSRS
      290       300       310       320       330       340        

              370       380    
pF1KB8 GMNDLGERQSENSPNKEDVGNKSA
                               
NP_005 SSVDYIL                 
      350                      

>>XP_006713023 (OMIM: 601268) PREDICTED: C-C chemokine r  (355 aa)
 initn: 737 init1: 506 opt: 782  Z-score: 832.7  bits: 162.7 E(85289): 1.2e-39
Smith-Waterman score: 782; 37.8% identity (69.7% similar) in 347 aa overlap (21-360:10-352)

               10        20        30        40        50        60
pF1KB8 MAATASPQPLATEDADSENSSFYYYDYLDEVAFMLCRKDAVVSFGKVFLPVFYSLIFVLG
                           .:   .: :.:. .::.:  . ..   :.: .:::.:..:
XP_006            MTTSLDTVETFGTTSYYDDVG-LLCEKADTRALMAQFVPPLYSLVFTVG
                          10        20         30        40        

               70        80        90       100        110         
pF1KB8 LSGNLLLLMVLLRYVPRRRMVEIYLLNLAISNLLFLVTLPFWGISVAWH-WVFGSFLCKM
       : ::....:.:..:   : :..:::::::::.::::::::::   :  : ::::  .::.
XP_006 LLGNVVVVMILIKYRRLRIMTNIYLLNLAISDLLFLVTLPFWIHYVRGHNWVFGHGMCKL
       50        60        70        80        90       100        

     120       130       140       150       160       170         
pF1KB8 VSTLYTINFYSGIFFISCMSLDKYLEIVHAQPYHRLRTRAKSLLLATIVWAVSLAVSIPD
       .: .:  ..:: ::::  ...:.:: ::::    : :: . ... . ..:.... ...:.
XP_006 LSGFYHTGLYSEIFFIILLTIDRYLAIVHAVFALRARTVTFGVITSIVTWGLAVLAALPE
      110       120       130       140       150       160        

     180       190       200         210       220       230       
pF1KB8 MVFVQTHENPKGVWNCHADFGGHGTI--WKLFLRFQQNLLGFLLPLLAMIFFYSRIGCVL
       ..: .:.:  . .  : : .  . :.  :. :  ...... ..::::.: . :. :  .:
XP_006 FIFYETEELFEETL-CSALYP-EDTVYSWRHFHTLRMTIFCLVLPLLVMAICYTGIIKTL
      170       180         190       200       210       220      

       240       250       260       270       280        290      
pF1KB8 VRLRPAGQGRALKIAAALVVAFFVLWFPYNLTLFLHTLLDLQVFGN-CEVSQHLDYALQV
       .:     . .:...  .....::..: :::....: .  .. .::: :: :.::: .. :
XP_006 LRCPSKKKYKAIRLIFVIMAVFFIFWTPYNVAILLSSYQSI-LFGNDCERSKHLDLVMLV
        230       240       250       260        270       280     

        300       310       320       330          340       350   
pF1KB8 TESIAFLHCCFSPILYAFSSHRFRQYLKAFLAAVLGWHLA---PGTAQASLSSCSESSIL
       :: ::. :::..:..::: ..:::.::. :.   :  ::.   :   . .:   :  :  
XP_006 TEVIAYSHCCMNPVIYAFVGERFRKYLRHFFHRHLLMHLGRYIPFLPSEKLERTSSVSPS
         290       300       310       320       330       340     

           360       370       380    
pF1KB8 TAQEEMTGMNDLGERQSENSPNKEDVGNKSA
       ::. :..                        
XP_006 TAEPELSIVF                     
         350                          

>>NP_001828 (OMIM: 601268) C-C chemokine receptor type 3  (355 aa)
 initn: 737 init1: 506 opt: 782  Z-score: 832.7  bits: 162.7 E(85289): 1.2e-39
Smith-Waterman score: 782; 37.8% identity (69.7% similar) in 347 aa overlap (21-360:10-352)

               10        20        30        40        50        60
pF1KB8 MAATASPQPLATEDADSENSSFYYYDYLDEVAFMLCRKDAVVSFGKVFLPVFYSLIFVLG
                           .:   .: :.:. .::.:  . ..   :.: .:::.:..:
NP_001            MTTSLDTVETFGTTSYYDDVG-LLCEKADTRALMAQFVPPLYSLVFTVG
                          10        20         30        40        

               70        80        90       100        110         
pF1KB8 LSGNLLLLMVLLRYVPRRRMVEIYLLNLAISNLLFLVTLPFWGISVAWH-WVFGSFLCKM
       : ::....:.:..:   : :..:::::::::.::::::::::   :  : ::::  .::.
NP_001 LLGNVVVVMILIKYRRLRIMTNIYLLNLAISDLLFLVTLPFWIHYVRGHNWVFGHGMCKL
       50        60        70        80        90       100        

     120       130       140       150       160       170         
pF1KB8 VSTLYTINFYSGIFFISCMSLDKYLEIVHAQPYHRLRTRAKSLLLATIVWAVSLAVSIPD
       .: .:  ..:: ::::  ...:.:: ::::    : :: . ... . ..:.... ...:.
NP_001 LSGFYHTGLYSEIFFIILLTIDRYLAIVHAVFALRARTVTFGVITSIVTWGLAVLAALPE
      110       120       130       140       150       160        

     180       190       200         210       220       230       
pF1KB8 MVFVQTHENPKGVWNCHADFGGHGTI--WKLFLRFQQNLLGFLLPLLAMIFFYSRIGCVL
       ..: .:.:  . .  : : .  . :.  :. :  ...... ..::::.: . :. :  .:
NP_001 FIFYETEELFEETL-CSALYP-EDTVYSWRHFHTLRMTIFCLVLPLLVMAICYTGIIKTL
      170       180         190       200       210       220      

       240       250       260       270       280        290      
pF1KB8 VRLRPAGQGRALKIAAALVVAFFVLWFPYNLTLFLHTLLDLQVFGN-CEVSQHLDYALQV
       .:     . .:...  .....::..: :::....: .  .. .::: :: :.::: .. :
NP_001 LRCPSKKKYKAIRLIFVIMAVFFIFWTPYNVAILLSSYQSI-LFGNDCERSKHLDLVMLV
        230       240       250       260        270       280     

        300       310       320       330          340       350   
pF1KB8 TESIAFLHCCFSPILYAFSSHRFRQYLKAFLAAVLGWHLA---PGTAQASLSSCSESSIL
       :: ::. :::..:..::: ..:::.::. :.   :  ::.   :   . .:   :  :  
NP_001 TEVIAYSHCCMNPVIYAFVGERFRKYLRHFFHRHLLMHLGRYIPFLPSEKLERTSSVSPS
         290       300       310       320       330       340     

           360       370       380    
pF1KB8 TAQEEMTGMNDLGERQSENSPNKEDVGNKSA
       ::. :..                        
NP_001 TAEPELSIVF                     
         350                          




384 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Fri Nov  4 15:51:39 2016 done: Fri Nov  4 15:51:41 2016
 Total Scan time:  8.380 Total Display time:  0.030

Function used was FASTA [36.3.4 Apr, 2011]
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