GENSCAN 1.0	Date run:  4-Nov-116	Time: 15:50:53

Sequence gi568815575f:41595634_41796776 : 201143 bp : 39.25% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.06 PlyA -    742    737    6                               1.05
 1.05 Term -  12137  12021  117  2  0   51   55    58 0.592  -3.64
 1.04 Intr -  14392  14271  122  2  2  109   95    39 0.835   5.99
 1.03 Intr -  31070  30971  100  2  1  107   91    73 0.924   8.26
 1.02 Intr -  41028  40945   84  0  0   65   94   100 0.964   7.40
 1.01 Init -  48578  47724  855  2  0   43   25   390 0.012  22.87
 1.00 Prom -  51810  51771   40                              -7.75

 2.00 Prom +  51968  52007   40                              -3.05
 2.01 Init +  59808  60172  365  2  2   39  116   314 0.585  25.87
 2.02 Term +  61229  61283   55  2  1   97   41    34 0.598  -4.35
 2.03 PlyA +  61543  61548    6                               1.05

 3.04 PlyA -  64486  64481    6                               1.05
 3.03 Term -  64928  64752  177  2  0  110   48   140 0.867   8.90
 3.02 Intr -  69819  69644  176  1  2   36   90   114 0.962   5.14
 3.01 Init -  71488  71365  124  1  1   77   82    77 0.985   6.38
 3.00 Prom -  77576  77537   40                              -6.15

 4.02 PlyA -  78242  78237    6                               1.05
 4.01 Sngl -  80861  80124  738  2  0   82   41   695 0.879  60.16
 4.00 Prom -  96632  96593   40                              -5.75

 5.00 Prom +  96696  96735   40                              -6.15
 5.01 Sngl + 100022 101146 1125  1  0   75   51   141 0.527   5.50
 5.02 PlyA + 101619 101624    6                               1.05

 6.00 Prom + 103961 104000   40                              -4.15
 6.01 Init + 111665 111728   64  1  1   65   94    43 0.132   3.99
 6.02 Intr + 116245 116355  111  2  0   54   87    41 0.010   0.03
 6.03 Intr + 119306 119468  163  0  1   83  116   138 0.069  14.21
 6.04 Intr + 123664 123700   37  1  1   60   67    54 0.757  -2.15
 6.05 Term + 123957 124205  249  2  0   74   49   245 0.926  13.92
 6.06 PlyA + 124361 124366    6                               1.05

 7.07 PlyA - 124396 124391    6                               1.05
 7.06 Term - 126737 126588  150  2  0   38   47   134 0.008   1.23
 7.05 Intr - 143823 143751   73  2  1   82  115    54 0.881   5.99
 7.04 Intr - 149968 149891   78  0  0   69   91   108 0.169   6.95
 7.03 Intr - 153105 152995  111  2  0  118   78     9 0.038   1.48
 7.02 Intr - 191650 191545  106  2  1   96   68    75 0.474   4.65
 7.01 Intr - 193798 193697  102  2  0  103   81     9 0.495   0.93

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl -  48578  47649  930  2  0   43   39   412 0.849  27.98


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815575f:41595634_41796776|GENSCAN_predicted_peptide_1|425_aa
MNINAKILNKILVNRIQQHIKKLIHHDQVSFIPGMQGWFNICKSINIIHHINRTNNKNHM
ITSIDAEKAFDKIQQRFMLKTLNKLGIDGTYLKIVRAIYDKPTANIILNGQKLEAFPLKT
GTRQECPLSPLLFNIVLEVLARAIRQEKEIKGIRLGKEEVKLSLFADDMIVYLENPIISA
QNLLKLISNFSKVSGYKINVQKSQAFLYTNNRQIESQIMSELPFTIASKRIKYLGIQLTK
DVKDLFKESYKPLLNEINEDTNKWKNIPCLWIGRINIMKMAILPKERDRYAYKIHLPETV
EQLRKFNARRKLKGAVLAAVSSHKFNSFYGDPPEELPDFSEDPTSSGAVSQVLDSLEEIH
ALTDCSEKDLDFLHSVFQDQHLHTLLDPANERRENMENLAGSSLEMGLSHILWQLLVTCS
PGCES

>gi568815575f:41595634_41796776|GENSCAN_predicted_CDS_1|1278_bp
atgaacatcaatgcaaaaatcctcaataaaatactggtaaaccgaatacagcagcacatc
aaaaagcttatccaccacgatcaagtcagcttcatccctgggatgcaaggctggttcaac
atatgcaaatcaataaacataatccatcatataaacagaaccaacaacaaaaaccacatg
attacctcaatagatgcagaaaaggcctttgacaaaattcaacagcgcttcatgctaaaa
actctcaataaactaggtattgatggaacttatctcaaaatagtaagagctatttatgac
aaacccacagccaatatcatactgaatgggcaaaaactggaagcattccctttgaaaact
ggcacaagacaggaatgccctctctcaccactcctattcaacatagtgttggaagttctg
gccagggcaatcaggcaagagaaagaaataaaaggtattcgattaggaaaagaggaagtc
aaattgtccctgtttgcagatgacatgattgtatatttagaaaaccccatcatctcagcc
caaaatctccttaagctgataagcaacttcagcaaagtctcaggatacaaaatcaatgtg
caaaaatcacaagcattcctatacaccaataacagacaaatagagagccaaatcatgagt
gaactcccattcacaattgcttcaaagagaataaaatacctaggaatccaacttacaaag
gatgtgaaggacctcttcaaggagagctacaaaccactgctcaatgaaataaatgaggac
acaaacaaatggaagaatattccatgcttatggataggaagaatcaatatcatgaaaatg
gccatactgcccaaagagcgggatcgttacgcctacaagattcatcttccagaaacagta
gagcagctgaggaaattcaatgcaaggaggaaactaaagggtgcagtactagccgctgtg
tcaagtcacaaattcaactcattctatggggatccccctgaagagttaccagatttctcc
gaagaccctacctcctcaggagcagtctcacaggtgctggacagcctggaagagattcat
gcgcttacagactgcagtgaaaaggacctagattttctacacagtgttttccaggatcag
catcttcacacactactagatccagcaaatgagagaagagagaacatggagaatcttgca
gggtcaagcttggaaatgggtttatctcacattctttggcaactgctagtcacgtgctca
cctggatgtgagagctga

>gi568815575f:41595634_41796776|GENSCAN_predicted_peptide_2|139_aa
MTEGHKMILTPEIPMLSHMMSEKHSNGDGSAQNSSIIKWKWFMQEHPLREVQGGNILKQG
ASFPLGLTLELCEELWDSTDTWTGPREQLSTDQRRAAWCVDDSSKVNRQHPVWKDATLDQ
RSGSRTRAITTSVRTRDDS

>gi568815575f:41595634_41796776|GENSCAN_predicted_CDS_2|420_bp
atgactgaaggacataaaatgatcttgacacctgaaatacccatgctttctcacatgatg
tcagagaaacattcaaatggggatggcagcgcccagaatagttccataataaaatggaaa
tggtttatgcaggaacatcctctccgggaagtgcaaggaggaaacatcctcaagcaggga
gcctcttttcccctaggactgactctggaactgtgtgaggaactgtgggattctactgac
acttggacagggccccgtgaacagctctcaactgaccaacgaagagctgcttggtgtgtg
gatgacagttccaaggtgaatcgacagcatcctgtttggaaggatgccactcttgatcaa
agaagtggttctaggaccagagccataactaccagtgttagaaccagggatgattcctaa

>gi568815575f:41595634_41796776|GENSCAN_predicted_peptide_3|158_aa
MAGTGHGRSDYSQVKAPILSGLAQEVVGVKLSFKASSKLSAGRVGTPHFMAPEVVKREPY
GKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYKMNPRQWSHISESAKDLVRRM
LMLDPAERITVYEALNHPWLKVHEHSQVTFYTLSEHFQ

>gi568815575f:41595634_41796776|GENSCAN_predicted_CDS_3|477_bp
atggctgggactggccatggtcgctctgattattcccaagttaaggcccccattttgagt
ggcttggcccaggaagtggtaggagtcaagttgagtttcaaagcatcatccaaactgtca
gcaggacgtgttggaacacctcattttatggcaccagaagtggtcaaaagagagccttac
ggaaagcctgtagacgtctgggggtgcggtgtgatcctttttatcctgctcagtggttgt
ttgcctttttacggaaccaaggaaagattgtttgaaggcattattaaaggaaaatataag
atgaatccaaggcagtggagccatatctctgaaagtgccaaagacctagtacgtcgcatg
ctgatgctggatccagctgaaaggatcactgtttatgaagcactgaatcacccatggctt
aaggtacatgagcattcacaggtcaccttctacactttgtctgaacacttccagtga

>gi568815575f:41595634_41796776|GENSCAN_predicted_peptide_4|245_aa
MDKNELVQKAKLAEQAERYDDMAACMKSVTEQGAELSNEERNLLSVAYKNVLGARRSSWR
VVSSIEQKTEGAEKKQQMAREYREKVDTELRDICNDVLFLLEKFLIPSASQAESKVFSLK
MKGDYYHYLAEVATGDDKKGIVDQSQQAYQEAFEISKKEMQPTHPIRPGLALNFSVFYYE
ILNSPEKACSLAKTAFDEAIAELDTLIEESYKDSMLIMQLLRDNLTLWTSDTQGDEAEAG
EGGEN

>gi568815575f:41595634_41796776|GENSCAN_predicted_CDS_4|738_bp
atggataaaaatgagctggttcagaaggccaaactggccgagcaggctgagcgatatgat
gacatggcagcctgcatgaagtctgtaactgagcaaggagctgaattatccaatgaggag
aggaatcttctctcagttgcttataaaaatgttttaggagcccgtaggtcatcttggagg
gtcgtctcaagtattgaacaaaagacggaaggtgctgagaaaaaacagcagatggctcga
gaatacagagagaaagttgatacggagctaagagatatctgcaatgatgtactgtttctt
ttggaaaagttcttgatccccagtgcttcacaagcagagagcaaagtcttctctttgaaa
atgaaaggagattactaccattacttggcagaggttgccactggtgatgacaagaaaggg
attgtggatcagtcacaacaagcataccaagaagcttttgaaatcagcaaaaaggaaatg
caaccaacacatcctatcagaccaggtctggcccttaacttctctgtgttctattatgag
attctgaactccccagagaaagcctgctctcttgcaaagacagcttttgatgaagccatt
gctgaacttgatacattaattgaagagtcatacaaagacagcatgctaataatgcaatta
ctgagagacaacttgacattgtggacatcagatacccaaggagacgaagctgaagcagga
gaaggaggggaaaattaa

>gi568815575f:41595634_41796776|GENSCAN_predicted_peptide_5|374_aa
MTTTSVSSWPYSSHRMRFITNHSDQPPQNFSATPNVTTCPMDEKLLSTVLTTSYSVIFIV
GLVGNIIALYVFLGIHRKRNSIQIYLLNVAIADLLLIFCLPFRIMYHINQNKWTLGVILC
KVVGTLFYMNMYISIILLGFISLDRYIKINRSIQQRKAITTKQSIYVCCIVWMLALGGFL
TMIILTLKKGGHNSTMCFHYRDKHNAKGEAIFNFILVVMFWLIFLLIILSYIKIGKNLLR
ISKRRSKFPNSGKYATTARNSFIVLIIFTICFVPYHAFRFIYISSQLNVSSCYWKEIVHK
TNEIMLVLSSFNSCLDPVMYFLMSSNIRKIMCQLLFRRFQGEPSRSESTSEFKPGYSLHD
TSVAVKIQSSSKST

>gi568815575f:41595634_41796776|GENSCAN_predicted_CDS_5|1125_bp
atgacgacaacttcagtcagcagctggccttactcctcccacagaatgcgctttataacc
aatcatagcgaccaaccgccacaaaacttctcagcaacaccaaatgttactacctgtccc
atggatgaaaaattgctatctactgtgttaaccacatcctactctgttattttcatcgtg
ggactggttgggaacataatcgccctctatgtatttctgggtattcaccgtaaaagaaat
tccattcaaatttatctacttaacgtagccattgcagacctcctactcatcttctgcctc
cctttccgaataatgtatcatattaaccaaaacaagtggacactaggtgtgattctgtgc
aaggttgtgggaacactgttttatatgaacatgtacattagcattattttgcttggattc
atcagtttggatcgctatataaaaattaatcggtctatacagcaacggaaggcaataaca
accaaacaaagtatttatgtctgttgtatagtatggatgcttgctcttggtggattccta
actatgattattttaacacttaagaaaggagggcataattccacaatgtgtttccattac
agagataagcataacgcaaaaggagaagccatttttaacttcattcttgtggtaatgttc
tggctaattttcttactaataatcctttcatatattaagattgggaagaatctattgagg
atttctaaaaggaggtcaaaatttcctaattctggtaaatatgccactacagctcgtaac
tcctttattgtacttatcatttttactatatgttttgttccctatcatgcctttcgattc
atctacatttcttcacagctaaatgtatcatcttgctactggaaagaaattgttcacaaa
accaatgagatcatgctggttctctcatctttcaatagttgcttagatccagtcatgtat
ttcctgatgtccagtaacattcgcaaaataatgtgccaacttctttttagacgatttcaa
ggtgaaccaagtaggagtgaaagcacttcagaatttaaaccaggatactccctgcatgat
acatctgtggcagtgaaaatacagtctagttctaaaagtacttga

>gi568815575f:41595634_41796776|GENSCAN_predicted_peptide_6|207_aa
MKDHMERGAQPAQLFQVMLQTPVLLLNKILPYPSSPFKLSAYPHSSWIRTGAWELLNAGL
TLELCEELRDSTETWTGPRKQLSTDQQRVAWCVNDSSKVNNLVWKDATLDQRSLEQQLCC
NRLLKKGYTRQQFCHKSTLNKGDRVIYKLTCPPYCCVRFPLAGTGPRILYLSRLASNLEL
LKKGKGRGEQKKEEVTCGMLRKVKTCK

>gi568815575f:41595634_41796776|GENSCAN_predicted_CDS_6|624_bp
atgaaagatcacatggagagaggggcacagcctgctcaactcttccaggtgatgctccag
acacctgttctgctgctcaataaaattcttccctacccatcctcacccttcaaattgtca
gcgtatcctcattcttcgtggataaggacaggagcttgggaactgctgaacgcaggactg
actctggaactgtgtgaggaactgcgggattctactgagacttggacagggccccgtaaa
cagctctcaactgaccaacaaagagttgcttggtgtgtaaatgacagttccaaggtgaac
aatcttgtttggaaggatgccactcttgatcaaagaagtttggagcagcagctgtgctgc
aatcggttactgaagaaagggtacactcgccagcagttttgccacaagagtacactgaac
aaaggagacagggtcatttataagctgacgtgtccaccctactgctgtgtccggtttcca
ttggctggaacgggacctcgcattctgtatctgtcccgattggctagcaacttagaactt
cttaaaaaaggcaaaggcagaggagaacaaaagaaggaggaagtaacttgtggaatgctg
agaaaagtaaaaacctgcaaataa

>gi568815575f:41595634_41796776|GENSCAN_predicted_peptide_7|206_aa
XNTEPPALPCWAPNIQLLIRILTLPSPTDLVDSADLKREASICHMLKHPHIVELLETYSS
DGMLYMVFELLRLFPHPFWVPPESPLALRTSPKFFLETPESIEAFYFMDGADLCFEIVKR
ADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPLKSTVSLLQYSIGHTEPALHQC
GTGKYQEVMITGSHLGNWLSQMSINR

>gi568815575f:41595634_41796776|GENSCAN_predicted_CDS_7|621_bp
ntaaacactgagcccccagccctgccatgctgggctccaaacatccagcttctcattaga
atcttaacactgccctctccaactgatttggtagactctgcagatctaaagcgggaagcc
agtatctgtcatatgctgaaacatccacacattgtagagttattggagacatatagctca
gatggaatgctttacatggttttcgaattgctccgtcttttccctcatcccttctgggtc
cctccagaaagtcctctagctctcagaacatctcccaaattctttttggaaacaccagag
tccattgaggcattttattttatggatggagcagatctgtgttttgaaatcgtaaagcga
gctgacgctggttttgtgtacagtgaagctgtagccagccattatatgagacagatactg
gaagctctacgctactgccatgataataacataattcacagggatgtgaagcctctgaag
tcaacagtgtcacttctgcagtattctattggtcacacagagccagccctgcatcagtgt
gggacgggtaaatatcaggaggtgatgatcactgggagccatcttggaaactggctatca
cagatgtcaatcaaccgttga