GENSCAN 1.0	Date run:  4-Nov-116	Time: 15:47:12

Sequence gi568815595f:32853423_33054502 : 201080 bp : 44.09% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +  19948  20079  132  0  0   58   68    42 0.342   0.04
 1.02 Intr +  20396  20563  168  1  0  135   99   113 0.697  17.24
 1.03 Intr +  29568  29594   27  2  0  101   78    37 0.668   2.31
 1.04 Intr +  32512  32646  135  0  0   85   87   254 0.996  25.76
 1.05 Term +  36938  38389 1452  1  0  131   32  2414 0.995 230.84
 1.06 PlyA +  38821  38826    6                              -0.45

 2.00 Prom +  38848  38887   40                              -5.66
 2.01 Init +  49638  50055  418  2  1   97   76   286 0.126  24.89
 2.02 Term +  60808  60857   50  2  2   67   55    58 0.034  -2.13
 2.03 PlyA +  62346  62351    6                               1.05

 3.00 Prom +  79639  79678   40                              -1.76
 3.01 Init +  82400  82467   68  1  2   63   78    59 0.730   2.94
 3.02 Intr +  86604  86731  128  0  2   98   58   145 0.940  12.82
 3.03 Term +  87355  87545  191  2  2   65   43    61 0.381  -3.09
 3.04 PlyA +  88964  88969    6                              -0.45

 4.00 Prom +  89794  89833   40                              -2.26
 4.01 Sngl + 100001 101083 1083  1  0   52   43   872 0.999  76.18
 4.02 PlyA + 102853 102858    6                               1.05

 5.00 Prom + 111301 111340   40                              -5.16
 5.01 Init + 111829 111964  136  0  1   59   57   149 0.144   9.20
 5.02 Intr + 117226 117357  132  2  0   56  111    36 0.127   3.32
 5.03 Intr + 119634 119682   49  1  1   86   88    11 0.461  -1.36
 5.04 Intr + 122859 122916   58  0  1   84   46    80 0.830   2.29
 5.05 Term + 123251 123472  222  1  0  128   38    88 0.854   4.72
 5.06 PlyA + 125871 125876    6                               1.05

 6.14 PlyA - 126131 126126    6                               1.05
 6.13 Term - 143922 143623  300  0  0  116   45   183 0.007  12.02
 6.12 Intr - 147855 147625  231  0  0   21   86   107 0.006   1.77
 6.11 Intr - 160888 160634  255  1  0  137  102   166 0.987  20.54
 6.10 Intr - 163418 163287  132  2  0   73   97    94 0.991   9.64
 6.09 Intr - 165139 165026  114  1  0   61   78   102 0.992   7.14
 6.08 Intr - 168233 168144   90  2  0   95   96    23 0.121   3.99
 6.07 Intr - 169787 169695   93  2  0   66   30    94 0.013   1.56
 6.06 Intr - 170903 170829   75  2  0   60  116    52 0.016   4.91
 6.05 Intr - 172578 172418  161  1  2   68   58    62 0.004   0.91
 6.04 Intr - 181280 181103  178  2  1   73   56   168 0.000  11.59
 6.03 Intr - 192810 192698  113  1  2   98   98   148 0.949  16.90
 6.02 Intr - 194707 194572  136  1  1   21  113    65 0.250   2.44
 6.01 Intr - 200127 200069   59  1  2  100   91    41 0.394   4.20

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init -   8230   8191   40  1  1   83   67    43 0.839   2.05
S.002 Sngl - 144063 143623  441  0  0   79   45   316 0.940  20.65
S.003 Init + 180441 180764  324  2  0   79    5   231 0.974  11.23
S.004 Term + 180774 180914  141  2  0   80   47   201 0.999  13.13


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815595f:32853423_33054502|GENSCAN_predicted_peptide_1|637_aa
ARAAKETFLVHSYIQATNIRLGNTVLTTFLDNEAKIQGKLSCQEVLHLYCDTCSVPICRE
CTMGRHGGHSFIYLQEALQDSRALTIQLLADAQQGRQAIQTKQKKLLLQLSIEQAQTVAE
QVEMKAKVVQSEVKAVTARHKKALEERECELLWKVEKIRQVKAKSLYLQVEKLRQNLNKL
ESTISAVQQVLEEGRALDILLARDRMLAQVQELKTVRSLLQPQEDDRVMFTPPDQALYLA
IKSFGFVSSGAFAPLTKATGDGLKRALQGKVASFTVIGYDHDGEPRLSGGDLMSAVVLGP
DGNLFGAEVSDQQNGTYVVSYRPQLEGEHLVSVTLCNQHIENSPFKVVVKSGRSYVGIGL
PGLSFGSEGDSDGKLCRPWGVSVDKEGYIIVADRSNNRIQVFKPCGAFHHKFGTLGSRPG
QFDRPAGVACDASRRIVVADKDNHRIQIFTFEGQFLLKFGEKGTKNGQFNYPWDVAVNSE
GKILVSDTRNHRIQLFGPDGVFLNKYGFEGALWKHFDSPRGVAFNHEGHLVVTDFNNHRL
LVIHPDCQSARFLGSEGTGNGQFLRPQGVAVDQEGRIIVADSRNHRVQMFESNGSFLCKF
GAQGSGFGQMDRPSGIAITPDGMIVVVDFGNNRILVF

>gi568815595f:32853423_33054502|GENSCAN_predicted_CDS_1|1914_bp
gctagagcagcaaaggaaacttttctggtacattcttacatccaggccactaatatcaga
ctaggtaacacagtcttaacaacttttctggataatgaagctaagattcagggcaaactc
tcatgccaggaggtgctgcacctgtactgtgacacttgctctgtacccatctgtcgtgag
tgcacaatgggccggcatgggggccacagcttcatctacctccaggaggcactgcaggac
tcacgggcactcaccatccagctgctggcagatgcccagcagggacgacaggcaatccag
acaaagcagaagaagctgcttctgcagctgagcatcgagcaggcccagacggtggcggaa
caggtggagatgaaggcgaaggttgtgcagtcggaggtcaaagccgtgacggcgaggcat
aagaaagccctggaggaacgcgagtgtgagctgctgtggaaggtagaaaagatccgccag
gtgaaagccaagtctctgtacctgcaggtggagaagctgcggcaaaacctcaacaagctt
gagagcaccatcagtgccgtgcagcaggtcctggaggagggtagagcgctagacatccta
ctggcccgagaccggatgctggcccaggtgcaggagctgaagaccgtgcggagcctcctg
cagccccaggaagacgaccgagtcatgttcacaccccccgatcaggcactgtaccttgcc
atcaagtcttttggctttgttagcagcggggcctttgccccactcaccaaggccacaggc
gatggcctcaagcgtgccctccagggtaaggtggcctccttcacagtcattggttatgac
cacgatggtgagccccgcctctcaggaggcgacctgatgtcggctgtggtcctgggccct
gatggcaacctgtttggtgcagaggtgagtgatcagcagaatgggacatacgtggtgagt
taccgaccccagctggagggtgagcacctggtatctgtgacactgtgcaaccagcacatt
gagaacagccctttcaaggtggtggtcaagtcaggccgcagctacgtgggcattgggctc
ccgggcctgagcttcggcagtgagggtgacagcgatggcaagctctgccgcccttggggt
gtgagtgtagacaaggagggctacatcattgtcgccgaccgcagcaacaaccgcatccag
gtgttcaagccctgcggcgccttccaccacaaattcggcaccctgggctcccggcctggg
cagttcgaccgaccagccggcgtggcctgtgacgcctcacgcaggatcgtggtggctgac
aaggacaatcatcgcatccagatcttcacgttcgagggccagttcctcctcaagtttggt
gagaaaggaaccaagaatgggcagttcaactacccttgggatgtggcggtgaattctgag
ggcaagatcctggtctcagacacgaggaaccaccggatccagctgtttgggcctgatggt
gtcttcctaaacaagtatggcttcgagggggctctctggaagcactttgactccccacgg
ggtgtggccttcaaccatgagggccacttggtggtcactgacttcaacaaccaccggctc
ctggttattcaccccgactgccagtcggcacgctttctgggctcggagggcacaggcaat
gggcagttcctgcgcccacaaggggtagctgtggaccaggaagggcgcatcattgtggcg
gattccaggaaccatcgggtacagatgtttgaatccaacggcagcttcctgtgcaagttt
ggtgctcaaggcagcggctttgggcagatggaccgcccttccggcatcgccatcaccccc
gacggaatgatcgttgtggtggactttggcaacaatcgaatcctcgtcttctaa

>gi568815595f:32853423_33054502|GENSCAN_predicted_peptide_2|155_aa
MPEPSPASMGSCAARASPTNAAPCSTAPSPIDRPRAEECERMARDWQAAPPAGSSTCSNP
LRDPLGEASWAPESGGDVESLYIQLRDCKHTNQHPVFSSRFVNAPIGTLYLAALVGTWRT
FMSSSGIVNTPISTLCLAQGHCSKSKAKTQAEVHF

>gi568815595f:32853423_33054502|GENSCAN_predicted_CDS_2|468_bp
atgcctgagccttcccccgcctccatgggttcctgtgcagcccgagcttccccgacgaat
gccgccccctgctccacggcgcccagtcccatcgaccgcccaagagctgaggagtgcgag
cgcatggcgcgggactggcaggcagctccacctgcaggcagctccacctgcagcaacccc
ctgcgggatccactgggtgaagccagctgggctcctgagtctggtggggacgtggaaagt
ctttatatccagctcagggattgtaaacacaccaatcagcaccctgtgtttagctcaagg
tttgtgaatgcaccaatcggcactctgtatctagctgccctggtggggacgtggagaacc
tttatgtctagctcagggattgtaaatacaccaatcagcaccctgtgtttagctcaagga
cattgttccaaaagcaaggccaagacgcaggcagaagtccacttctga

>gi568815595f:32853423_33054502|GENSCAN_predicted_peptide_3|128_aa
MNMTTCQEEFSDEISVTLLNPIRAPSPIDRPKGEECERMARDWQTAPPAAPVRDPLGEDS
WAPESVWKLCSFALYNKSCYCSLFGLTAFMSCNTHCDNLQLHSSAQRDHEPTERNEQLQT
HWFKSCNT

>gi568815595f:32853423_33054502|GENSCAN_predicted_CDS_3|387_bp
atgaatatgaccacttgccaggaagaattttctgatgagatcagtgtgacattactgaat
cccatacgggcgcccagtcccatcgaccgcccaaagggtgaggagtgcgagcgcatggcg
cgggactggcagacagctccacctgcagccccagtgcgggatccactgggtgaagacagc
tgggctcctgagtctgtgtggaagctttgttcttttgctctttacaacaaatcctgctac
tgttcgctctttgggttaactgcttttatgagctgtaacactcactgtgacaatttgcag
cttcactcctcagcccagcgagaccacgagcccactgagaggaacgaacaactccagacg
cactggtttaagagctgtaacacttaa

>gi568815595f:32853423_33054502|GENSCAN_predicted_peptide_4|360_aa
MNPTDIADTTLDESIYSNYYLYESIPKPCTKEGIKAFGELFLPPLYSLVFVFGLLGNSVV
VLVLFKYKRLRSMTDVYLLNLAISDLLFVFSLPFWGYYAADQWVFGLGLCKMISWMYLVG
FYSGIFFVMLMSIDRYLAIVHAVFSLRARTLTYGVITSLATWSVAVFASLPGFLFSTCYT
ERNHTYCKTKYSLNSTTWKVLSSLEINILGLVIPLGIMLFCYSMIIRTLQHCKNEKKNKA
VKMIFAVVVLFLGFWTPYNIVLFLETLVELEVLQDCTFERYLDYAIQATETLAFVHCCLN
PIIYFFLGEKFRKYILQLFKTCRGLFVLCQYCGLLQIYSADTPSSSYTQSTMDHDLHDAL

>gi568815595f:32853423_33054502|GENSCAN_predicted_CDS_4|1083_bp
atgaaccccacggatatagcagacaccaccctcgatgaaagcatatacagcaattactat
ctgtatgaaagtatccccaagccttgcaccaaagaaggcatcaaggcatttggggagctc
ttcctgcccccactgtattccttggtttttgtatttggtctgcttggaaattctgtggtg
gttctggtcctgttcaaatacaagcggctcaggtccatgactgatgtgtacctgctcaac
cttgccatctcggatctgctcttcgtgttttccctccctttttggggctactatgcagca
gaccagtgggtttttgggctaggtctgtgcaagatgatttcctggatgtacttggtgggc
ttttacagtggcatattctttgtcatgctcatgagcattgatagatacctggcaattgtg
cacgcggtgttttccttgagggcaaggaccttgacttatggggtcatcaccagtttggct
acatggtcagtggctgtgttcgcctcccttcctggctttctgttcagcacttgttatact
gagcgcaaccatacctactgcaaaaccaagtactctctcaactccacgacgtggaaggtt
ctcagctccctggaaatcaacattctcggattggtgatccccttagggatcatgctgttt
tgctactccatgatcatcaggaccttgcagcattgtaaaaatgagaagaagaacaaggcg
gtgaagatgatctttgccgtggtggtcctcttccttgggttctggacaccttacaacata
gtgctcttcctagagaccctggtggagctagaagtccttcaggactgcacctttgaaaga
tacttggactatgccatccaggccacagaaactctggcttttgttcactgctgccttaat
cccatcatctacttttttctgggggagaaatttcgcaagtacatcctacagctcttcaaa
acctgcaggggcctttttgtgctctgccaatactgtgggctcctccaaatttactctgct
gacacccccagctcatcttacacgcagtccaccatggatcatgatctccatgatgctctg
tag

>gi568815595f:32853423_33054502|GENSCAN_predicted_peptide_5|198_aa
MWESLELPGDLLNGLDQNADSDMDNKAQIEVVSDGNKEVLGDWSKGVTRWIHHSRLKPVA
AVTPDDNQWISQQDPNRPTRIILRRNLTTVCFPLHRSPLTHEMLKSLRRLTGAIEGLFCF
LLLKLPVEASCFLGPLPQKLDVEKKGKDVSFQEYRWDRFNFKIIRNSEVGVDKEEKSEDK
RMIKKMDGGRISFTHWDI

>gi568815595f:32853423_33054502|GENSCAN_predicted_CDS_5|597_bp
atgtgggaaagtttggaacttcctggagacttgttgaatggcttagatcaaaatgctgat
agtgatatggacaataaagcccagattgaggtggtctcagatggaaataaggaagttctt
ggggactggagcaaaggtgtcacacgttggattcaccatagccggctgaaaccagtggca
gcagtgactcccgatgacaaccagtggattagccagcaagacccaaatcgccccacccga
ataatcctacggcgaaacctaaccaccgtatgcttccccctgcacagatctcccctcacc
cacgaaatgcttaaaagcctcagaagacttactggagctatcgagggccttttctgcttc
ctgctgctcaagctgcccgtggaagcttcatgcttcttagggccccttcctcagaagctg
gatgtggagaagaaaggcaaggatgtgtcatttcaggaatatagatgggacaggtttaat
tttaaaattattagaaattcagaggtgggggtggacaaagaagagaagagtgaagacaaa
aggatgatcaagaaaatggatggtggtagaatatcttttacacactgggatatttaa

>gi568815595f:32853423_33054502|GENSCAN_predicted_peptide_6|645_aa
XSNITDAFLSQRKCEPKGPLDSRASEAQSLPLRCKQCSMERDITNKKHSTAWVTTTLEAD
EGHKEGANSPYAAQPTSYDYDAPLSEAGDLTEKYFALRNIIQKGHLIVSTRDGQYVGCDG
PARMLHDIIELVQQFGRPYISQGIITGPDEHTTIPGAAGNGAAGDSAQSHRGGLQGLTTS
FLLHPFHSSSKARAVTRGQGQQRQRLRAWEWVLPGPFEKVPEGPIPPSTPKFAYGKVTLE
KKIAPNVQNNNIAKTKLAYYQKHILFTVKENCLKTVGAALDILCPSGPIKSLYPLTFIQV
KQHYGFVLYRTTLPQDCSNPAPLSSPLNGVHDRAYVAVDGIPQGVLERNNVITLNITGKA
GATLDLLVENMGRVNYGAYINDFKGLVSNLTLSSNILTDWTIFPLDTEDAVCSHLGGWGH
RDSGHHDEAWAHNSSNYTLPAFYMGNFSIPSGIPDLPQDTFIQFPGWTKQLESNLGNVAR
CKSEREREKREDRKEEKRRRRRRRGEEKRREKGRTRRRRKRRKEQEVVESGVSKGECGRH
KEERRKGQVWINGFNLGRYWPARGPQLTLFVPQHILMTSAPNTITVLELEWAPCSSDDPE
LCAVTFVDRPVIGSSVTYDHPSKPVEKRLMPPPPQKNKDSWLDHV

>gi568815595f:32853423_33054502|GENSCAN_predicted_CDS_6|1938_bp
ngcagcaacatcacagatgctttcctaagccagaggaagtgtgagcccaaaggacccttg
gactcaagggcaagtgaggcacagtctctgcccctgaggtgcaagcagtgtagcatggag
agagacataacaaataagaaacacagcacagcatgggtgactaccacattagaagcagac
gagggccacaaagaaggggccaactcaccctatgcagcacagcccaccagctacgactat
gatgccccactgagtgaggctggggacctcactgagaagtattttgctctgcgaaacatc
atccagaagggtcaccttattgtctccaccagagatggccaatatgttggctgtgatgga
cctgcccgcatgctacatgacatcattgaacttgtgcagcaatttgggagaccatatatt
tcccaaggcatcatcacaggtccagatgaacacacgaccatcccaggagcagctggcaat
ggtgctgcgggtgactcggcccagtcccatcgtggcgggcttcagggactgaccacctcc
ttcctgctgcaccctttccacagcagcagcaaggcaagagcagtgacgcggggccagggt
caacagcggcagaggctccgggcctgggagtgggtcctgcctggcccctttgaaaaagta
ccagaaggtcctatccctccatctacaccaaagtttgcatatggaaaggtcactttggaa
aagaaaatagctccaaatgttcaaaacaacaacattgctaaaaccaagctagcttattac
caaaagcacattctgtttaccgtgaaggaaaattgtttaaagacagtgggagcagctctg
gacattctgtgtccctctgggcccatcaaaagcctttatcccttgacatttatccaggtg
aaacagcattatgggtttgtgctgtaccggacaacacttcctcaagattgcagcaaccca
gcacctctctcttcacccctcaatggagtccacgatcgagcatatgttgctgtggatggg
atcccccagggagtccttgagcgaaacaatgtgatcactctgaacataacagggaaagct
ggagccactctggaccttctggtagagaacatgggacgtgtgaactatggtgcatatatc
aacgattttaagggtttggtttctaacctgactctcagttccaatatcctcacggactgg
acgatctttccactggacactgaggatgcagtgtgcagccacctggggggctggggacac
cgtgacagtggccaccatgatgaagcctgggcccacaactcatccaactacacgctcccg
gccttttatatggggaacttctccattcccagtgggatcccagacttgccccaggacacc
tttatccagtttcctggatggaccaagcaactggagtccaaccttggcaatgtagcaaga
tgtaagagtgagagagagagagagaagagagaagacaggaaggaggagaagagaagaagg
agaaggagaagaggagaggagaagagaagagagaaaggaagaacaagaaggagaagaaag
agaaggaaagaacaagaagtagtggagagtggagtgagcaagggggagtgcggcagacac
aaggaggaaaggaggaagggccaggtctggattaatggctttaaccttggccgctattgg
ccagcccggggccctcagttgaccttgtttgtgccccagcacatcctgatgacctcggcc
ccaaacaccatcaccgtgctggaactggagtgggcaccctgcagcagtgatgatccagaa
ctatgtgctgtgacgttcgtggacaggccagttattggctcatctgtgacctacgatcat
ccctccaaacctgttgaaaaaagactcatgcccccacccccgcaaaaaaacaaagattca
tggctggaccatgtatga