GENSCAN 1.0	Date run:  4-Nov-116	Time: 15:38:20

Sequence gi568815596r:230810006_231010962 : 200957 bp : 48.34% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +    258    317   60  2  0  102   89    22 0.466   2.63
 1.02 Intr +   4044   4109   66  2  0  106   86    30 0.452   3.70
 1.03 Intr +   7749   7892  144  2  0   45   75   105 0.484   5.38
 1.04 Term +   8511   8699  189  2  0  132   33   240 0.998  20.35
 1.05 PlyA +   8705   8710    6                               1.05

 2.00 Prom +   9397   9436   40                              -8.06
 2.01 Init +  12094  12144   51  0  0   89   90    74 0.953   8.86
 2.02 Intr +  17894  18017  124  1  1   79   66    52 0.818   2.26
 2.03 Intr +  18924  19060  137  1  2   70   64    66 0.227   2.69
 2.04 Term +  34634  34795  162  1  0   58   33   133 0.307   2.74
 2.05 PlyA +  38691  38696    6                               1.05

 3.00 Prom +  48498  48537   40                              -5.16
 3.01 Init +  55021  55140  120  0  0  106   76   213 0.994  22.09
 3.02 Intr +  63412  63552  141  0  0   96   94   226 0.974  24.55
 3.03 Intr +  65513  65536   24  1  0  129   65     5 0.581   0.52
 3.04 Intr +  65615  65803  189  1  0   84   76   440 0.996  42.18
 3.05 Intr +  66852  66962  111  2  0   94   91   193 0.999  20.78
 3.06 Intr +  67395  67545  151  2  1   92   69   305 0.999  28.74
 3.07 Term +  68003  68094   92  0  2  104   54   225 0.918  18.58
 3.08 PlyA +  69222  69227    6                               1.05

 4.04 PlyA -  69967  69962    6                               1.05
 4.03 Term -  80179  80039  141  1  0   49   43    89 0.313  -1.57
 4.02 Intr -  84531  84104  428  1  2  106   77   111 0.513   5.31
 4.01 Init -  86141  85994  148  2  1   84   82    86 0.834   7.85
 4.00 Prom -  87734  87695   40                              -2.66

 5.02 PlyA -  87807  87802    6                               1.05
 5.01 Sngl - 100957  99998  960  1  0   76   43  1314 0.989 122.36
 5.00 Prom - 103399 103360   40                              -5.46

 6.00 Prom + 103410 103449   40                              -7.36
 6.01 Init + 105159 105391  233  2  2   98   55    39 0.153  -0.46
 6.02 Intr + 113038 113319  282  1  0   59   49   178 0.160   7.53
 6.03 Intr + 119591 119780  190  2  1   50   46   149 0.224   6.49
 6.04 Intr + 134048 134325  278  1  2   90   94   202 0.802  17.31
 6.05 Intr + 144075 144185  111  0  0   81   43    60 0.029   0.29
 6.06 Term + 146933 147035  103  2  1   95   38   113 0.054   4.75
 6.07 PlyA + 148051 148056    6                               1.05

 7.00 Prom + 170997 171036   40                              -4.36
 7.01 Init + 180319 181108  790  0  1   97   77  1008 0.692  94.87
 7.02 Intr + 186491 186529   39  0  0   92   80    31 0.007   0.90
 7.03 Intr + 190361 190532  172  0  1  164   20   101 0.016   9.90
 7.04 Term + 194886 195747  862  0  1   15   33  2525 0.866 231.90
 7.05 PlyA + 198009 198014    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term - 185818 185649  170  2  2   51   33   166 0.951   5.44
S.002 Term + 190361 190451   91  2  1  164   42    72 0.949   7.39
S.003 Init + 194064 194113   50  2  2   65   92    41 0.942   2.62


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815596r:230810006_231010962|GENSCAN_predicted_peptide_1|152_aa
DLLTRHKLLSAEFLEQHYDRFFSEYEKLLHSENYVTKRQSLKLLGELLLDRHNFTIMTKY
ISKPENLKLMMNLLRDKSRNIQFEAFHVFKVFVANPNKTQPILDILLKNQAKLIEFLSKF
QNDRTEDEQFNDEKTYLVKQIRDLKRPAQQEA

>gi568815596r:230810006_231010962|GENSCAN_predicted_CDS_1|459_bp
gatttacttacaagacataaattgctcagtgcagaatttttggaacagcattatgataga
tttttcagtgaatatgagaagttacttcattcagaaaattatgtgacaaaaagacagtca
ctgaagcttctcggtgaactactactagatagacacaacttcacaattatgacaaaatac
atcagtaaacctgagaacctcaaattaatgatgaacctgctgcgagacaaaagtcgcaac
atccagtttgaggcctttcacgtttttaaggtgtttgtagccaatcctaacaagacgcag
cccatcctagacatcctcctcaagaaccaggccaaactcatagagttcctcagcaagttt
cagaacgacaggacggaggatgagcagtttaacgacgagaagacctatttagttaaacag
atcagggatttgaagagaccagctcagcaagaagcttaa

>gi568815596r:230810006_231010962|GENSCAN_predicted_peptide_2|157_aa
MAVSSLTIWFPEDMKDRNLQSTLLGPEEQCQGSRNPICSDQQSQDRRRGKRICHRPLTEP
VPAVSKACAGLEAVSHSEGLSLLPQGTVPDAGPRPGKWTLKSPQPASQPAIHSAIHVAIQ
TSINQGQFCKELPAMPRDRYSLVITIGGEEQDASGIQ

>gi568815596r:230810006_231010962|GENSCAN_predicted_CDS_2|474_bp
atggctgtgtcctcactgaccatctggtttccagaagacatgaaggacaggaacctccag
agcacattgttggggcctgaggagcagtgccaagggtcccggaatcccatctgctctgat
caacagtcacaggaccgccgacgaggaaagaggatttgccaccgtcccctgacagagcct
gtccctgctgtgtcgaaggcctgtgcaggactcgaggccgtctcccactcagagggcctg
tccttgctgccccaagggactgtccctgacgcagggcctaggcctggaaagtggacactc
aagagtccccagccagccagccagccagccattcattcagccatccatgtggccatccaa
acatctatcaaccaggggcaattttgcaaggaacttccagcaatgcctagagatagatat
tctttggttatcacaattggtggtgaggagcaggatgcttctggcatccagtag

>gi568815596r:230810006_231010962|GENSCAN_predicted_peptide_3|275_aa
MVKISFQPAVAGIKGDKADKASASAPAPASATEILLTPAREEQPPQHRSKRGGSVGGVCY
LSMGMVVLLMGLVFASVYIYRYFFLAQAFGACSGRLARDNFFRCGVLYEDSLSSQVRTQM
ELEEDVKIYLDENYERINVPVPQFGGGDPADIIHDFQRGLTAYHDISLDKCYVIELNTTI
VLPPRNFWELLMNVKRGTYLPQTYIIQEEMVVTEHVSDKEALGSFIYHLCNGKDTYRLRR
RATRRRINKRGAKNCNAIRHFENTFVVETLICGVV

>gi568815596r:230810006_231010962|GENSCAN_predicted_CDS_3|828_bp
atggtgaagattagcttccagcccgccgtggctggcatcaagggcgacaaggctgacaag
gcgtcggcgtcggcccctgcgccggcctcggccaccgagatcctgctgacgccggctagg
gaggagcagcccccacaacatcgatccaagagggggggctcagtgggcggcgtgtgctac
ctgtcgatgggcatggtcgtgctgctcatgggcctcgtgttcgcctctgtctacatctac
agatacttcttccttgcgcaggcttttggggcatgtagcggacggctggcccgagataac
ttcttccgctgtggtgtgctgtatgaggactccctgtcctcccaggtccggactcagatg
gagctggaagaggatgtgaaaatctacctcgacgagaactacgagcgcatcaacgtgcct
gtgccccagtttggcggcggtgaccctgcagacatcatccatgacttccagcggggtctg
actgcgtaccatgatatctccctggacaagtgctatgtcatcgaactcaacaccaccatt
gtgctgccccctcgcaacttctgggagctcctcatgaacgtgaagagggggacctacctg
ccgcagacgtacatcatccaggaggagatggtggtcacggagcatgtcagtgacaaggag
gccctggggtccttcatctaccacctgtgcaacgggaaagacacctaccggctccggcgc
cgggcaacgcggaggcggatcaacaagcgtggggccaagaactgcaatgccatccgccac
ttcgagaacaccttcgtggtggagacgctcatctgcggggtggtgtga

>gi568815596r:230810006_231010962|GENSCAN_predicted_peptide_4|238_aa
MGSDKTESPLSSSRTPGVHTSNQGFLVFAQRDYQVARNDQTGAVIGWREGCSLGELNNVM
HKRNSLNSLENCDTTFCAETEVEVVGGVFTAPSLGARGVGCLHLPCTQDPKERGTVCETG
ERSPPEPGHLISQALGCPSGATKTLRLGTSHRNAVLSILFAPILVNVSFITSSNNKKTKS
EAIQLEAFLGLEPQVFLYSNTHRLRQLVTSPAPTPDAKPSRYCPKLGGAEEPSEGEEK

>gi568815596r:230810006_231010962|GENSCAN_predicted_CDS_4|717_bp
atggggtcagataaaactgagtcaccactgtcctcctcaagaacacctggtgtccacacc
tctaaccagggcttcctggtgtttgcacaaagagattatcaggtggccaggaacgatcag
actggagcagtcattgggtggagggaaggctgcagcctgggtgagctgaacaatgtcatg
cacaaaagaaattctcttaacagtttggaaaactgtgacaccaccttctgtgcagaaacg
gaagtggaagtggtggggggtgtcttcacggctcccagcctcggggcacgtggtgtgggg
tgtttgcacctgccgtgcacccaagaccccaaggagcgggggaccgtgtgtgaaactggt
gaacgcagccctcctgagccagggcatctaatttcccaggctcttggctgcccaagtggg
gctactaaaaccctgagacttggcaccagtcaccgaaatgctgttctttccattctgttt
gccccaattctggtaaatgtgagttttattaccagcagcaacaacaagaagacaaagtca
gaagcgatccaactggaagccttcctgggtttggagcctcaggtgttcctttacagcaac
acacaccgactaagacaactagtgacctctcctgctccgacgcccgacgccaagccctca
cgctactgtcccaaacttggaggcgccgaggagcctagtgaaggggaggaaaagtag

>gi568815596r:230810006_231010962|GENSCAN_predicted_peptide_5|319_aa
MSQQNTSGDCLFDGVNELMKTLQFAVHIPTFVLGLLLNLLAIHGFSTFLKNRWPDYAATS
IYMINLAVFDLLLVLSLPFKMVLSQVQSPFPSLCTLVECLYFVSMYGSVFTICFISMDRF
LAIRYPLLVSHLRSPRKIFGICCTIWVLVWTGSIPIYSFHGKVEKYMCFHNMSDDTWSAK
VFFPLEVFGFLLPMGIMGFCCSRSIHILLGRRDHTQDWVQQKACIYSIAASLAVFVVSFL
PVHLGFFLQFLVRNSFIVECRAKQSISFFLQLSMCFSNVNCCLDVFCYYFVIKEFRMNIR
AHRPSRVQLVLQDTTISRG

>gi568815596r:230810006_231010962|GENSCAN_predicted_CDS_5|960_bp
atgagtcagcaaaacaccagtggggactgcctgtttgacggtgtcaacgagctgatgaaa
accctacagtttgcagtccacatccccaccttcgtcctgggcctgctcctcaacctgctg
gccatccatggcttcagcaccttccttaagaacaggtggcccgattatgctgccacctcc
atctacatgatcaacctggcagtctttgacctgctgctggtgctctccctcccattcaag
atggtcctgtcccaggtacagtcccccttcccgtccctgtgcaccctggtggagtgcctt
tacttcgtcagcatgtacggaagcgtcttcaccatctgcttcatcagcatggaccggttc
ttggccatccgttacccgctactggtgagccacctccggtcccccaggaagatctttggg
atctgctgcaccatctgggtcctggtgtggaccggaagcatccctatctacagtttccat
gggaaagtggaaaaatacatgtgcttccacaacatgtctgatgatacctggagcgccaag
gtcttcttcccgctggaggtgtttggcttcctccttcccatgggcatcatgggcttctgc
tgctccaggagcatccacatcctgctgggccgccgagaccacacccaggactgggtgcag
cagaaagcctgcatctacagcatcgcagccagcctggctgtcttcgtggtctccttcctc
ccagtccacctggggttcttcctgcagttcctggtgagaaacagctttatcgtagagtgc
agagccaagcagagcatcagcttcttcttgcaattgtccatgtgtttctccaacgtcaac
tgctgcctggatgttttctgctactactttgtcatcaaagaattccgcatgaacatcagg
gcccaccggccttccagggtccagctggtcctgcaggacaccacgatctcccggggctaa

>gi568815596r:230810006_231010962|GENSCAN_predicted_peptide_6|398_aa
MDLKQQSCTDCGQGPWEWVLWNSGEVSAAPLHSCQGAIPVLPLMLGSVSQAAVEMFSVST
PAAPSVECCLSTIRSRDGWDSRNCQWSMVPSSAHTLKDPVSHLRQPCGFACTAETSKPSY
VAPHQTYLSSLCGLDFPENTSNKKITTLRRVATEKVALPAAARLLSAQSIAAATKLLPAV
ILPMAVDGPDGAWSPQNVQKLDKGGLQMQWLSYHRKPTASRGGPLLRSLQRAQVSPRRRT
SKSSEVRSLSMKMPSAIHYTHNSILVPDAGSQRGPQGDFPGNYPPLDIGQGKAVVWKGAN
PHPSNVCPHDCPGGFHELDDPEAMVLHTKPNRNRGLLSKFRDAKVSQPWLCSPVIVPTTA
APGISSKIPLWMPETAESTKPDCRQSEVVSVQVFHPRM

>gi568815596r:230810006_231010962|GENSCAN_predicted_CDS_6|1197_bp
atggacctgaagcagcagagctgcactgactgtggtcagggaccctgggagtgggttctc
tggaattccggggaggtctcagcagcacccctgcatagctgccaaggagccatcccagtg
ctgccattgatgttgggatctgtgtcacaggcagcagtggagatgttctcagtttccacc
ccagcagcaccatctgtggagtgctgcctttctaccatccgcagcagggatggctgggat
tcccgcaactgccagtggtccatggtaccctcatccgcccacaccctcaaggatccagtg
tcccacttgcggcagccctgtggctttgcctgcacagctgagacctcgaaacccagctat
gtggctccacaccagacctacctttcttccctctgtggcctggactttccagagaacaca
agcaacaagaagatcacaaccctaaggagggttgcaactgagaaggtggcccttcctgca
gctgccaggctgttatctgcacagagcattgcagcagccaccaagcttctccctgcagtc
atcctgcccatggctgttgatggccctgatggggcttggagcccccagaatgtgcagaag
ttggacaaaggtggtcttcaaatgcaatggttgtcttatcaccgaaagcccacggcatcc
agaggaggccctttactacgaagtttacagagagcacaggtctctcccaggaggaggacc
agcaagagtagtgaagtgagaagcctctccatgaagatgccttctgccattcattacaca
cacaacagcatcttggtcccagatgccgggtcccagagaggacctcaaggagacttccca
ggaaattacccaccactggacattggacagggcaaagctgtggtgtggaaaggggcaaat
ccacatccctccaacgtgtgcccacatgactgtcccgggggcttccatgagcttgatgac
ccagaagctatggtcctgcacacgaagccaaatcgtaacagagggcttctgagcaagttc
cgagatgcaaaggtttcacagccctggctatgcagccccgtaatcgtgcccacaacagct
gcccctggcatcagttctaagatccccctgtggatgcctgaaactgcagagagtaccaag
cctgactgccgccaatcagaagtagtttctgttcaggtcttccacccacgaatgtaa

>gi568815596r:230810006_231010962|GENSCAN_predicted_peptide_7|620_aa
MEQRPGAQPCRAPQERKAEAQPQAPAQSVEGHGQVLLISGLWKQDEDGLSLQSFPGDTAA
DQLPRPSSARAMSGHTSASNCTARRSKRWGDSSMNCDDCPATKSKRFTKKSRRSEPKAED
PREAPGAPPGTPTSAAEDTASARGAPQHPPERGAQLLLVLCRASALLTQLLRLQLLLQQQ
HARDRRPPAALVGIVVQPQQEEEAEARRRMEALLSRVLAPHSPAVEVHTAVFCPGRPEGT
LDFQARRQQVHRVSLMDRETQTDDANVKAAPQSRKAGPLIRAGPHSCSCATCPCSSACWR
RLGLCHSRIFDVLLPRDWQMAPGRGLPNLLTFYRISTQHSYITTTTTTVSTITIITIILI
TITILITILTIITTIITITIITIIITTTTITIITTTIITITILITITIITTTIIITTTTI
TITITIITIIITITIFTITIITTIITITITTTITTIIITIITITIIITITTTITTIIITI
ITITIITITTTTIITTITTTIITTTTSISIITTTTTITTITTTTTTTIITTTTITTIITT
TTITTTTIITTIITTTIITIIITIIILTITIITIIIITIITITINITITITTTTYLYHQA
LHLAILHIPSINLYNHHPWR

>gi568815596r:230810006_231010962|GENSCAN_predicted_CDS_7|1863_bp
atggagcagcggcctggggcccagccctgcagggcaccccaggagaggaaggcggaggcg
cagccacaggccccggcccagtctgtcgagggccacggccaggtgctgctgatcagcggg
ctctggaagcaggatgaggacggcctgagcctgcagagctttccaggagacactgcagcc
gatcagctccccaggccctcgtccgcccgagccatgagcggccacaccagcgccagcaac
tgcaccgcacggcggtccaagcgctggggcgacagctccatgaactgcgacgactgcccg
gccacgaagtccaagcgcttcaccaagaagtcgcggcgctcggagcccaaggccgaggac
ccgcgcgaggcgccaggggctcctcctgggacccccacctccgcggcagaggacacagcg
tctgcacgcggggcaccgcagcacccgcctgagcggggcgcgcagctgctcctggtgttg
tgccgcgcgtctgcgctcctcacgcagctgctgcggctgcagctgctcctgcaacagcag
cacgcccgggaccgacgtccgcccgccgcgctcgtggggatcgtggtgcagccgcagcag
gaggaggaggccgaggcgcgccgccgcatggaggccctgctcagccgagtcctcgcgccg
cacagcccagccgtggaggtgcacacggccgtgttctgccccggccgccccgagggcacc
ctggacttccaagcgcgccgccagcaagtgcacagggtctccctgatggatcgggagacg
cagaccgatgatgctaacgtgaaggcagcccctcaatccaggaaagcagggcctctgatt
cgcgccggcccgcattcctgctcctgtgccacttgcccctgcagctccgcttgctggcgt
cgtctggggctatgccatagccgcatcttcgatgtccttctgcctcgggactggcagatg
gcgccagggagaggactccccaacctgctcaccttctacaggataagcactcaacatagc
tacatcaccactactaccaccactgtcagcaccatcaccattatcaccatcatcctcatc
accatcaccatcctcatcaccatcctcaccatcatcaccaccatcatcaccatcaccatc
atcaccatcatcatcaccaccaccaccatcaccatcatcaccaccaccatcatcaccatc
accatcctcatcaccatcaccatcatcaccaccaccatcatcatcaccaccaccaccatc
accatcaccatcaccatcatcaccatcatcatcaccatcaccatcttcaccatcaccatc
atcaccaccatcatcaccatcaccatcaccaccaccatcaccaccatcatcattaccatc
atcaccatcaccatcatcatcaccatcaccaccaccatcaccaccatcatcatcaccatc
atcaccatcaccatcatcaccatcaccaccaccaccatcatcaccaccatcaccaccacc
atcatcaccaccaccaccagtatcagcatcatcaccaccaccaccacaatcaccaccatc
accaccaccaccaccaccaccatcatcaccaccaccaccatcaccaccatcatcaccacc
accaccatcaccaccaccaccatcatcaccaccatcatcaccaccaccatcatcaccatc
atcatcaccatcatcatcctcaccatcaccatcatcaccatcatcatcatcaccatcatc
accatcaccatcaacatcaccatcaccatcaccaccaccacctacctctatcaccaggcc
ctgcacctggcaattctgcacatcccttcaattaatctttacaaccatcacccttggagg
tag