GENSCAN 1.0	Date run:  4-Nov-116	Time: 15:32:29

Sequence gi568815595f:26609673_26810449 : 200777 bp : 38.70% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +  13108  13423  316  0  1   87   80   185 0.608  12.31
 1.02 Intr +  13718  13854  137  0  2   86   19    48 0.621  -2.93
 1.03 Intr +  14004  14201  198  2  0   85  100    70 0.644   6.53
 1.04 Intr +  15464  15639  176  1  2   59   78   142 0.252   8.12
 1.05 Intr +  31315  31428  114  1  0   25   72   114 0.621   2.14
 1.06 Term +  32499  32802  304  0  1   55   46   219 0.735   8.06
 1.07 PlyA +  34409  34414    6                               1.05

 2.03 PlyA -  34679  34674    6                               1.05
 2.02 Term -  42842  42721  122  0  2  120   41    51 0.032   1.26
 2.01 Init -  64272  64068  205  0  1   49   94   147 0.872  10.46
 2.00 Prom -  66286  66247   40                              -2.65

 3.03 PlyA -  66330  66325    6                               1.05
 3.02 Term -  73777  73592  186  1  0   90   37   121 0.241   3.71
 3.01 Init -  79999  79937   63  1  0   62   84    65 0.280   4.70
 3.00 Prom -  85939  85900   40                              -5.65

 4.00 Prom +  98643  98682   40                              -5.95
 4.01 Sngl + 100001 100780  780  1  0   76   36   606 0.792  49.94
 4.02 PlyA + 101075 101080    6                               1.05

 5.04 PlyA - 102462 102457    6                               1.05
 5.03 Term - 119544 118486 1059  0  0  -23   37   486 0.252  23.53
 5.02 Intr - 128750 128695   56  0  2   91   98    33 0.081   2.38
 5.01 Init - 131868 131862    7  0  1   55  110     0 0.075  -0.01
 5.00 Prom - 136180 136141   40                              -5.65

 6.00 Prom + 137839 137878   40                              -1.45
 6.01 Init + 139038 139062   25  2  1   87   89    32 0.593   2.95
 6.02 Term + 148642 149315  674  2  2   55   49   263 0.065  12.03
 6.03 PlyA + 149423 149428    6                               1.05

 7.04 PlyA - 150719 150714    6                               1.05
 7.03 Term - 151001 150933   69  2  0   76   54    44 0.005  -3.24
 7.02 Intr - 161203 161076  128  2  2   67   85   114 0.561   8.48
 7.01 Init - 169092 168981  112  0  1   65   40    77 0.062   1.03
 7.00 Prom - 170608 170569   40                              -5.15

 8.00 Prom + 172782 172821   40                              -5.35
 8.01 Sngl + 174691 175347  657  0  0   65   43   342 0.665  23.32
 8.02 PlyA + 175575 175580    6                               1.05

 9.00 Prom + 175744 175783   40                              -6.15
 9.01 Init + 177017 178623 1607  1  2   37   86   401 0.967  26.69
 9.02 Term + 181346 181469  124  2  1   61   45   111 0.251   0.98
 9.03 PlyA + 182560 182565    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init -  23285  23161  125  2  2   90  103   128 0.822  14.19
S.002 Sngl -  59723  59502  222  2  0   51   33   187 0.831   4.40
S.003 Term - 135157 134934  224  2  2   87   38   161 0.910   7.10


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815595f:26609673_26810449|GENSCAN_predicted_peptide_1|414_aa
PGFGGDFPLLTEPTASLGKRRFASLLSLSALPARLRRLEQGLQRPPQQREPSRAPHGRPG
PHPRSVAAPEDASRATHCLRPAPQPPRTNAAAFAGSQARRAGPVPDPGRDLLLERESRPS
SLLFSRLLYNSLQTFVTPSLRGAHPVLCNLQELGRDREGEIREVGHGGWLRPPLKLRPAR
WESVHPCTRHPQLGNETFGVACGCAPWELQVQIWVGETFHVQAFLTFSAGALQRTPAALY
QLGKSKIQSSSFFWVPRLGHIGGNVDSPGLPGEIPRINRLSTVVGDVWNAKVWQCTKSHL
VGTVKEAGEEIYGRRLQKTPLYVCERKNKKGKSHLNHIVQIVSSSGIPCKDLRDFLESLD
QTLRATGVVEEMALPASGDTSRPCNSLGEKDEGLHQGVSSGKEKRMNGREAKEK

>gi568815595f:26609673_26810449|GENSCAN_predicted_CDS_1|1245_bp
cctgggtttggaggcgatttccctctattgactgagccgactgcatctctgggcaagcgg
cgctttgcctctctcctgtctttgtctgctcttcctgcaaggctacggcgcctggagcag
ggtctgcagcggccgccgcagcaacgcgagccaagtcgtgccccgcacggccgcccgggg
ccgcaccctcgctcggtggcggcgcccgaagacgccagccgcgccacgcactgcctgcgt
cccgcgccccagccgccgcgcaccaacgccgccgccttcgccgggagccaagcccgccgg
gccggcccggtcccagaccctgggagagacctcctcctggagagagagagtcgaccctct
tcgctcctgttcagccggctgctatacaatagtctgcaaacttttgtgaccccttccctg
cgcggtgctcaccccgtgctgtgcaacttgcaggagctgggtagggacagagaaggtgaa
ataagagaggtgggacatggaggatggctgcggccacccctgaagcttcgtccagcgcga
tgggagtcagtccatccttgcacacgccacccccaactcggcaatgaaacctttggagtg
gcttgcggctgtgcgccgtgggaactgcaagtgcagatatgggtgggtgaaaccttccac
gtgcaggcttttcttactttctccgcgggtgccctacagaggactcctgctgccttgtac
cagttgggaaaaagcaaaattcagagcagttcctttttctgggtccctcgccttggccac
atcggaggaaacgtcgactcgccagggctcccgggagaaatcccgagaataaacagactt
tctacagttgtgggagatgtttggaatgcaaaggtctggcagtgcacaaaaagtcactta
gtagggaccgtgaaggaagctggtgaagaaatctatggcaggaggcttcagaaaactcca
ctgtatgtttgtgagagaaagaataaaaaaggcaaatcacatcttaatcacattgtacaa
atagtctcatcttcaggaatcccctgcaaggatcttagggacttcctggagtccctggac
caaactttgagagccactggtgtggtggaggagatggctctaccagcaagtggggatacc
agcagaccttgtaatagcttaggggagaaagatgaaggcctgcaccaaggtgtatcttca
ggaaaggagaagaggatgaatgggagagaagctaaggagaaataa

>gi568815595f:26609673_26810449|GENSCAN_predicted_peptide_2|108_aa
MKLGLLQSGWLSNVVHKPGTNFKKNLKRVDRVSVIHQLMHYIKKTLLELTDFVQTSCFSG
GGCSSAGGGFELTLFYYPSADLHLVTQLFYEIPLASFFRPTSQLCSDI

>gi568815595f:26609673_26810449|GENSCAN_predicted_CDS_2|327_bp
atgaaattgggcctcctgcagtctggctggctttccaatgtggtccacaaaccagggacc
aatttcaagaagaacctcaaaagagtggacagggtgagtgtcattcaccaattaatgcac
tacattaagaaaactctcctagagctgactgattttgtgcagacttcctgtttcagtgga
ggaggctgttcttcagcaggtggaggatttgagctgactctgttctactacccctctgca
gacttgcatttagttacccagctcttctatgagattcctttggcttctttcttccgcccc
acttcacagctgtgcagtgacatctaa

>gi568815595f:26609673_26810449|GENSCAN_predicted_peptide_3|82_aa
MQILPPLYGSPYGNGERAGERTLLELMFGLNWWAPKKYDATTAEIWLCQYLDISAAATIY
PTDQMVVVLKCHRVVKWSYNVV

>gi568815595f:26609673_26810449|GENSCAN_predicted_CDS_3|249_bp
atgcagattttgccacctctttatggaagtccatatggaaatggagaaagagcaggagag
aggaccttgctagagcttatgtttggcctaaactggtgggccccaaagaaatatgatgct
acaactgctgaaatctggctttgccaatatttggatatttcagctgctgctacaatttac
ccaacagatcagatggttgtggtactgaaatgccatcgtgtagtaaagtggtcctataat
gtagtttaa

>gi568815595f:26609673_26810449|GENSCAN_predicted_peptide_4|259_aa
MNLVDLWLTRSLSMCLLLQSFVLMILCFHSASMCPKGCLCSSSGGLNVTCSNANLKEIPR
DLPPETVLLYLDSNQITSIPNEIFKDLHQLRVLNLSKNGIEFIDEHAFKGVAETLQTLDL
SDNRIQSVHKNAFNNLKARARIANNPWHCDCTLQQVLRSMASNHETAHNVICKTSVLDEH
AGRPFLNAANDADLCNLPKKTTDYAMLVTMFGWFTMVISYVVYYVRQNQEDARRHLEYLK
SLPSRQKKADEPDDISTVV

>gi568815595f:26609673_26810449|GENSCAN_predicted_CDS_4|780_bp
atgaatctggtagacctgtggttaacccgttccctctccatgtgtctcctcctacaaagt
tttgttcttatgatactgtgctttcattctgccagtatgtgtcccaagggctgtctttgt
tcttcctctgggggtttaaatgtcacctgtagcaatgcaaatctcaaggaaatacctaga
gatcttcctcctgaaacagtcttactgtatctggactccaatcagatcacatctattccc
aatgaaatttttaaggacctccatcaactgagagttctcaacctgtccaaaaatggcatt
gagtttatcgatgagcatgccttcaaaggagtagctgaaaccttgcagactctggacttg
tccgacaatcggattcaaagtgtgcacaaaaatgccttcaataacctgaaggccagggcc
agaattgccaacaacccctggcactgcgactgtactctacagcaagttctgaggagcatg
gcgtccaatcatgagacagcccacaacgtgatctgtaaaacgtccgtgttggatgaacat
gctggcagaccattcctcaatgctgccaacgacgctgacctttgtaacctccctaaaaaa
actaccgattatgccatgctggtcaccatgtttggctggttcactatggtgatctcatat
gtggtatattatgtgaggcaaaatcaggaggatgcccggagacacctcgaatacttgaaa
tccctgccaagcaggcagaagaaagcagatgaacctgatgatattagcactgtggtatag

>gi568815595f:26609673_26810449|GENSCAN_predicted_peptide_5|373_aa
MPVSLLLIKCVTKFLDYRSGGKVNKDTQELNSALHEADLIDIYRTLHPKSTEYTFFSAPQ
HTYSKIDHIVGSKALLSKCKRTEIITNYLSDHSAIKLELRIKNLTQNRSTTWKLNNLLLN
DYWVHNEMKAEIKMFFETNENKDTTYQNIWDTFKAVCRGKFIALNSHKRKQERSKIDTLT
SQLKELEKQEQTHSKASRRQEITKIRAELKEIEMQKTLQKINESRSWFFERINKIDKPLA
RLIKKKREKNQIDAIKNDKGDITTDPTEIQTTLREYYKHLYANKLENLEEMDKFLDTYTL
PGLNQEEVESLNRPITGSEIVAIINSLPTKKSPGPDGFTAEFYQRYKEELVPFLLKLFQS
IEKDKVFLKYEKT

>gi568815595f:26609673_26810449|GENSCAN_predicted_CDS_5|1122_bp
atgccagtgtccctgctgctaatcaagtgtgtcactaaattccttgattacagaagtgga
gggaaagtcaacaaggatacccaggaattgaactcagctctgcacgaagcagacctaata
gacatctacagaactctccatcccaaatcaacagaatatacatttttttcagccccacag
cacacctattccaaaattgaccacatagttggaagtaaagctctcctcagcaaatgtaaa
agaacagaaattataacaaactatctctcagaccacagtgcaatcaaactagaactcagg
attaagaatctcactcaaaaccgctcaactacatggaaactgaacaacctgctcctgaat
gactactgggtacataacgaaatgaaggcagaaataaagatgttctttgaaaccaatgag
aacaaagacacaacataccagaatatctgggacacattcaaagcagtgtgtagagggaaa
tttatagcactaaattcccacaagagaaagcaggaaagatccaaaattgacaccctaaca
tcacaattaaaagaactagaaaagcaagagcaaacacattcaaaagctagcagaaggcaa
gaaataactaaaatcagagcagaactgaaggaaatagagatgcaaaaaacccttcaaaaa
attaatgaatccaggagctggttttttgaaaggatcaacaaaattgataaaccgctagca
agactaataaagaaaaaaagagagaagaatcaaatagacgcaataaaaaatgataaaggg
gatatcaccaccgatcccacagaaatacaaactaccctcagagaatactacaaacacctc
tacgcaaataaactagaaaatctagaagaaatggataaattccttgacacatacaccctc
ccaggactaaaccaggaagaagttgaatctctgaatagaccaataacaggttctgaaatt
gtggcaataatcaatagcttaccaaccaaaaagagtccaggaccagatggattcacagcc
gaattctaccagaggtacaaggaggaactggtaccattccttctgaaactattccaatca
atagaaaaagacaaggtatttctgaaatatgagaaaacttga

>gi568815595f:26609673_26810449|GENSCAN_predicted_peptide_6|232_aa
MVKGEVGAANIFSRGTLLHMANHDHLYQWQRTESAFQNLHRTQVVMSWSRQGSTVALERD
GTWILIPVLMHVVHATVGQFSTYWASTSLNYRTNDKNHMIISIDAEKAFDKVQQPFMLKT
LNKLSIDGTYLKILRAIYDKPTASIILNGQKLEAFPLKTGTRQGCPFSPLLFNIVLEVMA
RVIRQEKEIKGIQLGKEEVKLSLFADDMIVYLENPIISAQNLLKLIGNFSKV

>gi568815595f:26609673_26810449|GENSCAN_predicted_CDS_6|699_bp
atggtgaaaggtgaagtgggagcagccaacatattttccagaggaacattactgcatatg
gctaaccatgatcatctctaccagtggcaaagaacagagagtgcatttcagaatttacat
agaacccaggtggtgatgtcctggagcagacaaggtagcacagtggctttggagagagac
ggaacatggattctgattcctgttctgatgcatgttgtccatgcaactgtgggccaattc
tcaacttactgggcttccacttctttgaattacagaaccaacgacaaaaaccacatgatt
atctcaatagacgcagaaaaggcctttgacaaagttcaacagcccttcatgctaaaaact
ctcaataaattgagtattgatgggacgtatctcaaaatattaagagctatctatgacaaa
cccacagccagtatcatactgaatgggcaaaaactggaagcattccctttgaaaactggc
acaagacagggatgccctttctcaccactcctattcaacatagtgttggaagttatggcc
agggtaatcaggcaggagaaggaaataaagggtatacaattaggaaaagaggaagtcaaa
ttgtccctgtttgcagatgacatgattgtatatctagaaaaccccatcatctcagcccaa
aatctccttaagctgataggcaacttcagcaaagtctga

>gi568815595f:26609673_26810449|GENSCAN_predicted_peptide_7|102_aa
MQTKATMRYHLTPIKVAYIQKTNAGEGVKKGEPLYTVERSSSFREWKLSVKVQKDKNRNS
RDLKSRKPNAYDLATGTQLEALVSDVPLPVSKCSHCLIPTYE

>gi568815595f:26609673_26810449|GENSCAN_predicted_CDS_7|309_bp
atgcagaccaaagctacaatgagatatcatctcaccccaattaaagtggcttatatccaa
aagacaaatgccggagagggtgtgaagaaaggggaacccttatacactgttgagaggagc
tcatcatttagggaatggaagttgtcagtaaaggtgcaaaaggacaagaacagaaatagc
agagacctgaaaagtagaaagcctaatgcttatgaccttgctactggaactcagcttgag
gccctggtgtctgatgttccccttcctgtgtccaagtgttctcattgtttaattcccacc
tatgagtga

>gi568815595f:26609673_26810449|GENSCAN_predicted_peptide_8|218_aa
MEDGMNEMKREGKFREKRIKRNEQSLQEIWDYVKRPNLRLIGVPESDGDNGTKLENTLQD
MIQENFPNLTRQVNVQIQEIQRMPQRYSSRRATPRHIIVRFTKVEMKEKMLRAAREKGRV
TLKGKPIRLTADLSAETLQARREWGPIFNILKEKNFQPRISYPAKLSFISEGEIKYFTDK
QMLRDFVTTRPALKELLKEALNMERNNRYQPLQNHVNL

>gi568815595f:26609673_26810449|GENSCAN_predicted_CDS_8|657_bp
atggaagatggaatgaatgaaatgaagcgagaaggaaagtttagagaaaaaagaataaaa
agaaatgagcaaagcctccaagaaatatgggactatgtgaaaagaccaaatctacgtctg
attggtgtacctgaaagtgatggggacaatggaaccaagttggaaaacactctgcaggat
atgatccaggagaatttccccaatctaacaaggcaggtcaacgttcagattcaggaaata
cagagaatgccacaaagatactcctcgagaagagcaactccaagacacataattgtcaga
tttaccaaagttgaaatgaaggaaaaaatgttaagggcagccagagagaaaggtcgggtt
accctcaaaggaaagcccatcagactaacagcggatctctcagcagaaaccctacaagcc
agaagagagtgggggccaatattcaacattctcaaagaaaagaattttcaacccagaatt
tcatatccagccaaactaagcttcataagtgaaggagaaataaaatactttacagacaaa
caaatgctgagagattttgtcaccaccaggcctgccctaaaagagctcctaaaggaagca
ctaaacatggaaaggaacaaccggtaccagccactgcaaaatcatgtcaacttgtaa

>gi568815595f:26609673_26810449|GENSCAN_predicted_peptide_9|576_aa
MNIDAKILNKILANRIQQHIKKLIHHDQLGFIPGMQGWFNICKSINIIQHLNRAKDKNHM
LISIDAEKAFDKIQQPFMLKTLNKLGIDGTHFKIIRAIYEKPTANIILNGQKLEAFPLKT
GTRQGCPLSPLLFDIVLEVLARAIRQEKEIKGIQLGKEEVKLSLFADNMILYLEDPIVSA
QNLLKLISNFSKVTGYKINVQKSQAFLYTNNRQTESQIMSELPFTIASKRIKYLGIQLTR
DVKDLFKENYKPLLKEIKEDTNKWKNIPCSWVGRINIVKMAILPKVIYRFNAIPIKLPMP
FFTQLEKTTLKFTWNQKRARITKSILSQKNKAGGITLLDFKLYYQATVTKTAWYWYKNRD
IDQWNRTEPSEIMPHIYNYLVFDKPEKNKQWGKDSLFNQWCWENWLAICRKLKLDPFLTP
YTKINSRWIKYLHVRPKTIKTLEENLGITIQDIGMGKDFMSKTPKAMATKAKIDKWDLIK
LKSFCTAKETTIRFNRQPTEWEKIFATYSSDKGLISRIYNELKQIYKKKTNKPIKRAVGF
PLAQDRSRNAVQESVLGIRDPNSPLGALPSCGCGDT

>gi568815595f:26609673_26810449|GENSCAN_predicted_CDS_9|1731_bp
atgaacattgatgcaaaaatcctcaataaaatactggcaaaccgaatccagcagcacatc
aaaaagcttatccaccatgatcaactgggcttcatccctgggatgcaaggctggttcaat
atatgcaaatcaataaacataatccagcatctaaacagagccaaagacaaaaaccacatg
cttatctcaatagatgcagaaaaggcctttgacaaaattcagcaacctttcatgttaaaa
actctcaataaattaggtattgatgggacacatttcaaaataataagagctatctatgag
aaacccacagccaatatcatactgaatgggcaaaaattggaagcattccctttgaaaact
ggcacaagacagggatgccctctctcgccactcctattcgacatagtgttggaagttctg
gccagggcaattaggcaggagaaggaaataaagggtattcaattaggaaaagaggaagtc
aaattgtccctgtttgcagacaacatgattctatatctagaagaccccattgtctcagcc
caaaatctccttaagctgataagcaacttcagcaaagtcacaggatacaaaatcaatgtg
caaaaatcacaagcgttcctatacaccaacaacagacaaacagagagccaaatcatgagt
gaactcccattcacaattgcttcaaagagaataaaatacctaggaatccaacttacaagg
gatgtgaaggacctcttcaaggagaactacaaaccactgctcaaggaaataaaagaggat
acaaacaaatggaagaacattccatgctcatgggtaggaagaatcaatattgtgaaaatg
gccatactgcccaaggtaatttacagattcaatgccatccccatcaagctaccaatgcct
ttcttcacacaattggaaaaaactactttaaagttcacatggaaccaaaaaagagcccgc
atcaccaagtcaatcctaagccaaaagaacaaagctggaggcatcacactacttgacttc
aaactatactaccaggctacagtaaccaaaacagcatggtactggtacaaaaacagagat
atagatcaatggaacagaacagagccctcagaaataatgccgcatatctacaactatctg
gtctttgacaaacctgagaaaaacaagcaatggggaaaggattccctatttaatcaatgg
tgctgggaaaactggctagccatatgtagaaagctgaaactggatcccttccttacacct
tatacaaaaatcaattcaagatggattaaatacttacatgttagacctaaaaccataaaa
accctagaagaaaacctaggcattaccattcaggacataggcatgggcaaggacttcatg
tctaaaacaccaaaagcaatggcaacaaaagccaaaattgacaaatgggatctaattaaa
ctaaagagcttctgcacagcaaaagaaactaccatcagattcaacaggcaacctacagaa
tgggagaaaatttttgcaacctactcatctgacaaagggctaatatccagaatctacaat
gaactcaaacaaatttacaagaaaaaaacaaacaaacccatcaaaagggcagtgggcttt
cctctagcccaggacagatccaggaatgctgtccaagagtcagtgcttggaatcagggac
cccaacagcccccttggtgctctgccctcctgtggttgtggggatacctaa