GENSCAN 1.0	Date run:  4-Nov-116	Time: 15:18:31

Sequence gi568815589r:90513231_90713827 : 200597 bp : 39.84% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.03 PlyA -   3224   3219    6                               1.05
 1.02 Term -   4523   4359  165  2  0   60   40   166 0.658   5.93
 1.01 Init -  10145  10053   93  2  0   80   82    86 0.615   7.63
 1.00 Prom -  12011  11972   40                              -3.45

 2.00 Prom +  30381  30420   40                              -5.15
 2.01 Init +  43858  43978  121  0  1   17   71   140 0.912   5.60
 2.02 Intr +  47420  47568  149  0  2   98   49    67 0.476   2.83
 2.03 Term +  49178  49402  225  1  0   44   28   190 0.478   4.40
 2.04 PlyA +  49605  49610    6                               1.05

 3.00 Prom +  56850  56889   40                              -7.45
 3.01 Init +  60656  60850  195  1  0   46   95   156 0.913  11.08
 3.02 Intr +  62116  62204   89  0  2    7   71    36 0.106  -8.35
 3.03 Intr +  69218  69336  119  2  2  123   49    83 0.360   7.09
 3.04 Intr +  70546  70814  269  2  2   84   85   194 0.303  15.03
 3.05 Term +  71404  71688  285  0  0   67   48   276 0.982  15.92
 3.06 PlyA +  72380  72385    6                               1.05

 4.00 Prom +  83844  83883   40                              -3.75
 4.01 Init +  84218  84338  121  1  1   48   58   145 0.476   7.90
 4.02 Term +  92586  92740  155  1  2  -33   37   225 0.088   2.40
 4.03 PlyA +  93299  93304    6                               1.05

 5.02 PlyA -  94974  94969    6                               1.05
 5.01 Sngl - 100597  99998  600  1  0   90   49   844 0.806  76.64
 5.00 Prom - 111010 110971   40                              -5.65

 6.00 Prom + 116024 116063   40                              -6.85
 6.01 Init + 119889 119998  110  2  2   80  100    80 0.583   7.86
 6.02 Intr + 129166 129282  117  1  0   86   65    53 0.274   1.46
 6.03 Intr + 129439 129590  152  1  2   59   61   161 0.385   9.39
 6.04 Intr + 145159 145286  128  2  2   51   82    83 0.301   3.48
 6.05 Intr + 151918 152122  205  0  1   40   41   117 0.174   0.05
 6.06 Intr + 152805 152943  139  1  1    9   78   147 0.382   4.40
 6.07 Intr + 157139 157283  145  2  1   86   90    22 0.441   1.56
 6.08 Intr + 167485 167615  131  0  2   16   82    77 0.031  -1.53
 6.09 Intr + 169218 169496  279  0  0   24  102   170 0.070   7.67
 6.10 Intr + 174046 174371  326  1  2   20  -14   310 0.020   8.49
 6.11 Term + 174417 175084  668  1  2  -37   39   310 0.545   6.60
 6.12 PlyA + 175315 175320    6                               1.05

 7.00 Prom + 175480 175519   40                              -6.15
 7.01 Sngl + 176438 177412  975  1  0   70   42   422 0.964  32.31
 7.02 PlyA + 177444 177449    6                               1.05

 8.00 Prom + 178992 179031   40                              -3.65
 8.01 Init + 182260 182314   55  0  1   55   44    62 0.405  -0.00
 8.02 Term + 182409 182671  263  1  2  104   33   141 0.475   4.90
 8.03 PlyA + 184057 184062    6                               1.05

 9.04 PlyA - 184081 184076    6                               1.05
 9.03 Term - 189750 189630  121  2  1  119   49    71 0.135   3.27
 9.02 Intr - 195212 195118   95  2  2   67   20    97 0.103  -1.36
 9.01 Init - 195986 195849  138  2  0   81   53    89 0.646   3.17

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815589r:90513231_90713827|GENSCAN_predicted_peptide_1|85_aa
MVPPEGDMMLTREEARMEQRKEAGLGQSALWYLRAEAQEEELDIRPVAPQSILHHTSPSR
SPSQELILRVDLISRLPLWFPCMFA

>gi568815589r:90513231_90713827|GENSCAN_predicted_CDS_1|258_bp
atggtccctcctgaaggagacatgatgttaaccagggaagaggctcggatggaacagagg
aaagaggctgggcttggtcagtcagcattgtggtatctgagagcggaggcgcaggaggag
gagctggacattcgtccagttgcccctcagtccattctccaccacacttctccatcccgc
tccccgtcacaggagctgattttacgagtggacctcatcagcaggctcccactctggttc
ccatgtatgtttgcctag

>gi568815589r:90513231_90713827|GENSCAN_predicted_peptide_2|164_aa
MHNIVSHAEYTGVQVFRDTSSMLQEGATGSTVKAKCTESIGCSVRPLLPRCLHAWLVVGP
PACLSFLFIEDKTTSAFGYGDIFYLEEQERQHMTGQLPEVRDHDNGTLKPHLNDLTFSVG
AGGCTISNEWVSLPSVPKRVYKAMSPEPAVTHTALNPIQSSLPL

>gi568815589r:90513231_90713827|GENSCAN_predicted_CDS_2|495_bp
atgcacaacattgtgagtcatgctgagtacacaggggtccaggtattcagggacacttca
tcaatgctacaggaaggagctacaggaagcactgttaaggctaaatgcactgaaagcata
ggatgttcagtgcgtcctctcttgccacgttgtctccatgcttggcttgtggttgggcct
ccagcatgcttatcttttcttttcattgaggataagacgacatctgcatttggatatgga
gacattttctacttagaagaacaggaaaggcagcacatgactggtcaactgccagaggtg
agggatcatgacaatgggacattgaagccacacctaaacgacctgacattttcagtgggg
gcaggtggctgtaccatcagtaatgagtgggtatcactgccttcagtgcccaagagagtg
tacaaggcaatgtctccagagcctgctgtcactcacacggccctcaaccccatccagtcc
tccctccctctttaa

>gi568815589r:90513231_90713827|GENSCAN_predicted_peptide_3|318_aa
MLNLTPPKDNNQNPEHGKVLNKWADFFNNELEGGENEKKIKDKKYVKGLSSRPMGAFYLD
PDSNMKTGILGEMADPRTRTENIQDKPGASCSTNKAREAAASAQWYWGKKEAAKRVLGKS
SPAPEGSGDKMALSAQRTIYPVGGGPLFLLGTELSAGFQVVRCGPQATSKWRQCCRALGS
HGGPAAHHTMPVQLLLATLWAAVIVMYRILGLAPATLWIPWVVQGSRDHVEDEDLAVEGN
RKAEHTGSPASQPQVPLKSMDDNGDLGPSFKCPEGEIGTADVQLWEELTRSKERVTQDQS
LTRAGLSAGQGHSHGGSS

>gi568815589r:90513231_90713827|GENSCAN_predicted_CDS_3|957_bp
atgttaaatttgacaccacccaaagacaataatcagaatccagaacatgggaaggtattg
aacaaatgggcagattttttcaacaacgaattggaagggggagaaaatgagaagaagatc
aaggataaaaaatatgtaaagggcctatcatcaagaccaatgggtgcattttatttggat
cctgactcaaacatgaaaacagggatccttggagaaatggctgatcctaggactaggaca
gaaaatatacaagacaagcctggagcatcttgtagtacaaacaaggccagagaggccgcg
gcctctgcccagtggtactgggggaaaaaggaagccgcgaagcgggtcctggggaagagc
tcacctgctcctgagggaagtggcgacaagatggcgctttcagcccaacggacgatctac
cctgttggtggtgggcccttgtttctgttaggcacggaactctccgcagggttccaagtg
gtccgttgtggcccacaggccactagcaagtggaggcagtgctgcagagcccttgggagc
cacggagggcctgctgcccaccacacaatgcctgttcagctgctgctggccaccctgtgg
gcagcagtgatagtgatgtacagaatcctgggactagcgccagcgaccctgtggataccc
tgggtggtccagggcagtagagaccacgtggaggatgaggacttagcagtggaggggaac
aggaaagcagaacatactggttccccagcgtcccagccacaagtccctctgaagagtatg
gatgacaatggtgacttaggtccatccttcaaatgtcctgaaggggagattggaacagca
gatgtacaattgtgggaagaattaacaaggagtaaagaacgcgtaacacaagaccaaagt
ctgaccagagcaggcctctctgcaggacaagggcacagccatggagggagctcctga

>gi568815589r:90513231_90713827|GENSCAN_predicted_peptide_4|91_aa
MHHTHQVPRHGEDRAYHEDLGPQQGDQEPLASPAAEEEEGEPVPWVKGILWMWLQQQPWS
AECKELRPRTPHSKYLGQQQVGKAKAELMGA

>gi568815589r:90513231_90713827|GENSCAN_predicted_CDS_4|276_bp
atgcatcacacccatcaggtgccgcgtcatggggaggacagggcctatcatgaagacctt
ggcccacagcaaggtgaccaggagcccctggccagtcccgcagcggaggaggaggaagga
gagccagtgccgtgggttaaaggaatcctgtggatgtggctgcagcagcagccatggagt
gctgaatgcaaggaactgcggccacggaccccacattcaaagtatctggggcaacagcaa
gtcggcaaagccaaggcagaattgatgggggcataa

>gi568815589r:90513231_90713827|GENSCAN_predicted_peptide_5|199_aa
MPEQSNDYRVAVFGAGGVGKSSLVLRFVKGTFRESYIPTVEDTYRQVISCDKSICTLQIT
DTTGSHQFPAMQRLSISKGHAFILVYSITSRQSLEELKPIYEQICEIKGDVESIPIMLVG
NKCDESPSREVQSSEAEALARTWKCAFMETSAKLNHNVKELFQELLNLEKRRTVSLQIDG
KKSKQQKRKEKLKGKCVIM

>gi568815589r:90513231_90713827|GENSCAN_predicted_CDS_5|600_bp
atgcctgagcagagtaacgattaccgggtggccgtgtttggggctggcggtgttggcaag
agctccctggtgttgaggtttgtgaaaggcacattccgggagagctacatcccgacggtg
gaagacacctaccggcaagtgatcagctgtgacaagagcatatgcacattgcagatcacc
gacacgacggggagccaccagttcccggccatgcagcggctgtccatctccaaagggcac
gccttcatcctggtgtactccattaccagccgacagtccttggaggagctcaagcccatc
tacgaacaaatctgcgagatcaaaggggacgtggagagcatccccatcatgctggtgggg
aacaagtgtgatgagagccccagccgcgaggtgcagagcagcgaggcggaggccttggcc
cgcacatggaagtgtgccttcatggagacctcagccaagctcaaccataacgtgaaggag
cttttccaggagctgctcaacctggagaagcgcaggaccgtgagtctccagatcgacggg
aaaaagagcaagcagcagaaaaggaaagagaagctcaaaggcaagtgcgtgatcatgtga

>gi568815589r:90513231_90713827|GENSCAN_predicted_peptide_6|799_aa
MLTSQAACRGQRAATEGALASLSSGQFGQKQRQLGLRPHLLTLFLNPLNFHINRNTCTVE
FSKTVNPVLEGIPNNTGWQTIMPKPPVPQCGRSEATAEGGNRLPGEEHNSAQSFFRAPLA
QDRAAQGNSKFFGYLTEFAAATCFFQRICEFLQPSWYVPMMVLGAKVYNVWTYYTEETKV
WQLQPSASRCRSACHHAVIRHSDRGKAVAGRTGAPAGGDCAVALEVVLICSGVLASAGRS
ESSVSWRTLVGVARDPDWKAPPSEKTLSALSTPPTSCSQPKERSYNEFKDTLGCTGGYTW
ESEERVHFCKVLPLLNLISPATDRSSLGYTKRSNVNIAQVNSESSKHVSGAQNPRENSPM
SSSYNQESSEHNGLHSTRVSHDAQSKEMHKRRGVHRGSQADGGQGGMTNKTEEEDTSLWK
SLCTKCRGSELMLHTNSKATTNAEAQIPSPGPQEGWSAAARSECRKSIRPKVDKATKMGK
KQSRKTRNSKNQSTSPPPKERSSSPATEQSWMENDFDELREEGFRRSNYSKLKEEVRTNG
KEVKNFEKKLDEWITRITDAEKSLKDLMELKTTARELQRVSAMEDEMNEMKHEEKFREKR
IKRNEQSLQEIWDSVKRPNLCLIGVPESDGENGTKLENTLQDIIQENFPNLARQANIQIQ
EIQRTPQRYSSRRATPRHIIVRFTKVEMKEKMLRAAREKGQVTHKGKPIRLTADVSAETL
QARREWGPIFNILKEKSFQPRISYPAKQSFISEGEIKYFTDKQMLRDFVTTRPALKELLK
EALNMERKNRYKPLQKHAK

>gi568815589r:90513231_90713827|GENSCAN_predicted_CDS_6|2400_bp
atgctgacatcacaggcggcttgtagagggcagagggcagccactgaaggggccctggct
tccctgtcaagtggacaatttggtcaaaaacaaaggcagcttgggctaagaccacatctt
cttactcttttcctaaatccattaaacttccacattaacagaaacacctgcacagtagaa
ttttccaaaacggtaaatcctgttttggaaggaatccctaataatacgggctggcaaaca
atcatgccaaagccgcccgtgccccaatgcggacgcagcgaagccacggcagaaggggga
aatcggttacctggggaagaacacaactccgctcagagcttcttcagagctccactcgcg
caggacagggcagcgcaggggaattcgaagttttttggctatctcacagagtttgcagca
gcaacctgcttctttcaaaggatctgtgaattcttacagccttcctggtatgttcccatg
atggttcttggagcaaaagtttacaatgtttggacctactacactgaggagaccaaggtg
tggcagctgcagccgagtgctagcagatgcaggagtgcttgccaccatgcagtcattcgc
cacagtgacagaggcaaggcggttgcagggagaacgggggcccctgctggaggagactgt
gctgttgcactggaggtggtgttgatttgcagtggggtgctggctagtgcagggaggtct
gaatcctctgtcagctggagaacactggtgggagtagccagagaccctgactggaaggct
ccacctagtgaaaagaccctgagtgccttatccacacctccaacaagctgcagtcagccc
aaggagaggagttacaatgagtttaaggatacattgggctgtactggggggtacacatgg
gaaagtgaagagagggttcacttttgcaaggtacttccccttctaaatttaatttctcca
gccactgatagatcttccctgggctatactaaaaggtccaatgtaaatattgctcaagta
aactcagagagctcaaaacacgttagtggagctcagaatccaagagaaaactcacccatg
tcctccagttacaatcaagagagtagtgagcacaatgggctccacagcaccagggtgagc
cacgatgcacaaagcaaagagatgcacaaaagaagaggtgtgcacagaggatcccaggca
gatggtggtcaaggcggaatgacaaataagacagaggaggaggatacatctctctggaaa
tctttgtgcaccaaatgcagaggatctgagttgatgcttcacacaaacagcaaggcaact
actaatgcagaggctcaaatcccctctccgggaccacaggagggctggtctgcagcggcc
aggtcagaatgtaggaaatctataagaccaaaggtagataaagccacaaagatggggaaa
aaacagagcagaaaaaccagaaactctaaaaatcagagcacctctcctcctccaaaggaa
cgcagctcctcaccagcaacggaacaaagctggatggagaatgactttgatgagttgaga
gaagaaggcttcagaagatcaaattactccaagctaaaggaggaagttcgaaccaatggc
aaagaagttaagaactttgaaaaaaaattagatgaatggataactagaataaccgatgca
gagaagtccttaaaggacctgatggagctgaaaaccactgcacgagaactacaaagggta
tcagcgatggaagatgaaatgaatgaaatgaagcatgaagagaagtttagagaaaaaaga
ataaaaagaaatgaacaaagcctccaagaaatatgggactctgtgaaaagaccaaatcta
tgtctaattggtgtacctgaaagtgacggggagaatggaaccaagttggaaaatactctg
caggatattatccaggagaacttccccaatctagcaaggcaggccaacattcaaattcag
gaaatacagagaacgccacaaagatactcctcgagaagagcaactccaagacacataatt
gtcagattcaccaaagttgaaatgaaggaaaaaatgttaagggcagccagagagaaaggt
caagttacccacaaagggaagcccatcagactaacagctgatgtctcagcagaaactcta
caagccagaagagagtgggggccaatattcaacattcttaaagaaaagagttttcaaccc
agaatttcatatccagccaaacaaagcttcataagtgaaggagaaataaaatactttaca
gacaagcaaatgctgagagattttgtcaccaccaggcctgccctaaaagagctcctgaag
gaagcactaaacatggaaaggaaaaatcggtacaagccactgcaaaaacatgccaaatag

>gi568815589r:90513231_90713827|GENSCAN_predicted_peptide_7|324_aa
MDKFLNTYTLPRLNQEEVESLNRPITGSEIEAIINSLPTKKSPGPDGFTAEFYQRYKEEL
VPFLLKLFQSIEKEGILPNSFYEASIILIPKPGRDTTKKENFRPISLMNIDAKILNKILA
NRIQQHIKKLIHHDQVDFIPGMQGWFNMQKSINVIQHINRTKDKNHMIISIDAEKAFDKI
QQHFMLKTLNQLVIDGTYLKIIRAIYDKPTANIILNGQKLEAFPLKTGTRQGCPLSPLLF
NIVLEVLAREIKQEKEIKGIQLGKEEVKLSLFADDMIVYLENPIVSAQNLLKLISNFNKV
SGYKIDVQKSQAFLYTNNRQRAKS

>gi568815589r:90513231_90713827|GENSCAN_predicted_CDS_7|975_bp
atggataaattcctcaacacatacaccctcccaagactaaaccaggaagaagttgaatct
ctgaatagaccaataacaggctctgaaattgaggcaataattaatagcttaccaaccaaa
aaaagtccaggaccagatggattcacagccgaattctaccagaggtacaaggaggagctg
gtaccattccttctgaaactattccaatcaatagaaaaagagggaatcctccctaactca
ttttatgaagccagcatcatcctgataccaaagccgggcagagacacaaccaaaaaagag
aattttagaccaatatccttgatgaacattgatgcaaaaatcctcaataaaatactggca
aaccgaatccagcagcacatcaaaaagcttatccaccatgatcaagtggacttcatccct
gggatgcaaggctggttcaacatgcaaaaatcaataaacgtaatccagcatataaacaga
accaaagacaaaaaccacatgattatctcaatagatgcagaaaaggcctttgacaaaatt
caacaacacttcatgctaaaaactctcaatcaattagttattgatgggacatatctcaaa
ataataagagctatctatgacaaacccacagccaatatcatactgaatgggcaaaaactg
gaagcattccctttgaaaactggcacaagacaaggatgccctctctcaccactcctattc
aacatagtgttggaagttctggccagggaaatcaagcaggagaaggaaataaagggcatt
cagttaggaaaagaggaagtcaaattgtccctgtttgcagatgacatgattgtatatcta
gaaaaccccatcgtctcagcccaaaatctccttaagctgataagcaacttcaacaaagtt
tcaggatacaaaatcgatgtgcaaaaatcgcaagcattcttatacaccaataacagacag
agagccaaatcatga

>gi568815589r:90513231_90713827|GENSCAN_predicted_peptide_8|105_aa
MGAGSGGAHQVTSHGADQGTLPGSSAHCLVSVLRVSSSDSTFSPVVSATPKSVLMFPKCV
PRSTLFVAVAYLQRGWHLHVDTPRASQTRQVQTGAPCHPSTASVL

>gi568815589r:90513231_90713827|GENSCAN_predicted_CDS_8|318_bp
atgggtgcaggttctggtggagcccatcaggtcacctcgcacggtgctgaccagggtact
ttgccgggcagctctgctcactgcctggtgtcagtcctgcgcgtgtcctcttctgactct
acattttctcctgtggtctcagccactcctaaatctgtcctgatgttccccaaatgcgta
cctaggtccacactttttgtggctgtcgcatacctacagagagggtggcatctccacgtg
gacacccctcgggcatctcagactcgtcaagttcaaaccggagcaccttgtcatccctcc
acagcctctgtcctctaa

>gi568815589r:90513231_90713827|GENSCAN_predicted_peptide_9|117_aa
MPCLEMVRGVAAGVLLGDCALCKQELRMGELNYLKRLFKATKTEIKIKVEEMSTSLPEHR
PLLAIEAQRTALRGHALFFDTTTEQHSLLIRDHKPWSGPRQSTEPVHRRPSVSSFDV

>gi568815589r:90513231_90713827|GENSCAN_predicted_CDS_9|354_bp
atgccttgtttggagatggttaggggggtggctgctggagtcctgcttggagactgtgct
ctgtgcaaacaggaattgaggatgggagagctaaattacttgaaaagactatttaaggcc
acaaagacagaaataaaaattaaagtggaggagatgagcacctcccttcccgagcacagg
cccctgctggccattgaggctcagagaacagcactgcgtggccatgcgctcttttttgac
acaacaactgaacagcattctttgttgataagagaccacaaaccatggagtggtcctcgc
cagtctacagagcctgtgcacagaagaccttctgtttcatcttttgatgtatag