GENSCAN 1.0	Date run:  4-Nov-116	Time: 15:12:01

Sequence gi568815587r:107607838_107807930 : 200093 bp : 40.48% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +  10858  10928   71  2  2   84   76    51 0.062   1.48
 1.02 Intr +  13420  13550  131  0  2  104   67    23 0.036   0.37
 1.03 Intr +  22580  22725  146  2  2   67  111    12 0.042   0.41
 1.04 Intr +  22863  22891   29  1  2   98  115     8 0.817   1.42
 1.05 Intr +  26047  26154  108  0  0   13   86   115 0.591   3.36
 1.06 Intr +  27818  27928  111  1  0   56   96    94 0.838   6.66
 1.07 Intr +  39631  39764  134  0  2   87   92   135 0.996  12.32
 1.08 Intr +  42498  42566   69  0  0   83   91   106 0.963   7.78
 1.09 Intr +  48096  48229  134  0  2   56   84    39 0.690  -0.33
 1.10 Intr +  57188  57343  156  0  0   86    9   229 0.275  13.86
 1.11 Intr +  57484  57605  122  2  2   28   80    47 0.208  -2.81
 1.12 Term +  61428  61595  168  2  0  118   41   123 0.592   7.50
 1.13 PlyA +  62132  62137    6                              -0.45

 2.09 PlyA -  63304  63299    6                               1.05
 2.08 Term -  64212  64093  120  0  0   82   53    67 0.490   0.09
 2.07 Intr -  68251  68080  172  0  1   -5   89   123 0.308   2.12
 2.06 Intr -  68723  68439  285  1  0   52   49   173 0.035   5.33
 2.05 Intr -  75624  75587   38  0  2  110   71    64 0.015   3.04
 2.04 Intr -  94699  94634   66  1  0   86   99    18 0.017   0.88
 2.03 Intr - 107202 107067  136  2  1   46   28   131 0.006   2.55
 2.02 Intr - 115881 115817   65  0  2  105   -7   111 0.006  -0.10
 2.01 Init - 125003 124950   54  2  0   81  103     5 0.453   2.80
 2.00 Prom - 126339 126300   40                              -8.55

 3.02 PlyA - 126860 126855    6                               1.05
 3.01 Sngl - 129103 128609  495  1  0   53   55   354 0.484  24.40
 3.00 Prom - 129680 129641   40                              -3.65

 4.03 PlyA - 130071 130066    6                              -0.45
 4.02 Term - 130835 130329  507  2  0   75   35   379 0.636  24.72
 4.01 Init - 136681 136670   12  1  0   71   87    16 0.184  -0.48
 4.00 Prom - 137651 137612   40                              -6.95

 5.00 Prom + 139332 139371   40                              -2.45
 5.01 Init + 142143 142353  211  2  1   72   24   114 0.126   2.48
 5.02 Intr + 142455 142702  248  1  2   39   62   165 0.146   5.26
 5.03 Intr + 149957 150103  147  1  0   81   76    73 0.084   4.91
 5.04 Intr + 152412 152634  223  2  1   15   53   179 0.038   3.88
 5.05 Term + 156123 156514  392  1  2   38   49   191 0.119   4.36
 5.06 PlyA + 156799 156804    6                               1.05

 6.06 PlyA - 160656 160651    6                               1.05
 6.05 Term - 184963 184778  186  1  0   97   37   172 0.946   9.51
 6.04 Intr - 195318 195164  155  1  2   93   92   105 0.924  10.27
 6.03 Intr - 196933 196881   53  0  2   76   76    52 0.692   0.43
 6.02 Intr - 197678 197522  157  0  1  116   50   108 0.726   7.95
 6.01 Intr - 199039 198880  160  1  1   95   94    81 0.863   8.04

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815587r:107607838_107807930|GENSCAN_predicted_peptide_1|459_aa
XMSLKFVSIVGSLKIVLDRVCHKLQKRGKENICQAQTSVGGTEQYSRLIPCPNFEAIKGK
NYFSSMIRMLIQVCLYFYCKFLWRCLKFVMRKLTGRCELQRICYNTKPGASRTMKIETSL
RDSKSKLFGAMVTSNDESHSLNMTLLKFSIPRLSDCPVRLEQACLLQIVGYRNLIADVEK
LRREAYDSDNPQHEEMLLKLWKFLKPNTPLESRISKQWCEIGFQGDDPKTDFRGMGLLGL
YNLQYFAERDATAAQQVLSDSLHPKCRYSFAIVGINITDLAYNLLVSGALKTHFYNIAPE
APTLSHFQQTFCYLMHEFHKFWIEEDPMDIMEFNRVREKFRKRIIKQLQNPDMALCPHFA
ASEVFSSLGHNSEIPRDHCFWSICHPVTAHIVALCSVTSCLDTQERKAANLLSAPLQGKP
QQGGFAGLVRWQAQAGSYTAFISVEGETRRALGMCALHK

>gi568815587r:107607838_107807930|GENSCAN_predicted_CDS_1|1380_bp
ntgatgtctctgaaatttgtatcaattgttggttccctgaagattgtgctggacagagta
tgccataaattgcagaaaagaggaaaggaaaatatctgccaagctcaaacctctgtggga
ggaactgagcaatacagcagacttatcccatgtcccaactttgaggcaatcaagggaaaa
aactatttttctagtatgattagaatgttgatccaggtatgcctgtatttttactgtaaa
tttctgtggcgctgcctgaaatttgtaatgaggaagctaactggaagatgtgaactacaa
cggatctgttataataccaagccgggagcttctagaaccatgaaaatcgaaacatcactg
agggattctaaaagtaagttgtttggtgctatggtaacaagtaatgatgaaagtcattca
ctgaatatgactttattaaagttcagtattcctaggctgtctgactgtcctgtacgtttg
gagcaggcttgccttctgcaaatcgttgggtacaggaaccttattgcagatgtggaaaaa
ctgcgtagagaggcctatgattctgataatccccaacatgaagaaatgcttttgaagtta
tggaaattcttgaagcccaatactccactggaatctcggatttctaagcagtggtgtgaa
attggtttccaaggtgatgatcctaaaacagactttcgaggaatgggacttctgggactg
tacaatttgcagtatttcgcggaaagggatgccacagcagctcagcaggtcctgtctgac
tctcttcatccgaaatgcaggtactcatttgcaattgtgggcatcaatataactgacctg
gcatataatctactggtcagcggagctctaaaaacccatttctacaatatcgccccagaa
gctccaacattgtctcactttcagcaaacattctgctatttgatgcatgaatttcataag
ttttggatcgaagaggaccccatggacataatggaatttaatcgtgtgagggagaaattc
cgcaagaggatcatcaaacagctgcagaacccagacatggcgctgtgcccacattttgct
gcctcggaagtgttttcatctcttggtcataattccgagatccccagagaccactgtttc
tggagtatctgtcatccagtgactgctcatattgtggcattatgcagtgttacatcttgc
cttgatacccaggagaggaaggctgcaaatctcctttctgctcccttgcaggggaaacct
cagcaaggtgggtttgcaggacttgtgcgatggcaagctcaggccggaagctacacggca
tttatctctgtggaaggagaaacacgcagggctttgggcatgtgcgcgcttcataaataa

>gi568815587r:107607838_107807930|GENSCAN_predicted_peptide_2|311_aa
MNHRIQPMAYTFLKIPVSPTQCEDEKEEDLYDDPLLLNEYSQGKKAGGRGEYMKRASLAT
DQAQELSTDSQRMSFSHLRMYMVMVGTSTFPYSGLKEPKYVYVRSLQLLDEELILAPKLS
CSVSCCSSKEARRVELQKAATCSGLWHSTKAKANTLSLNRLWKSTSGCVGIPKSSSRKDF
KERICVPEYKQTCYTTPFTTWLLPLSLAPASFLVRGGQTKAGRSAEVLRDLGYVQLTTLT
SLGCGSCIYGPRRQMSHPVYSSKKNLETKEQRGKGHGAHSEKGAICRPGRRPSPEPDHAG
TLTWDLRPPEL

>gi568815587r:107607838_107807930|GENSCAN_predicted_CDS_2|936_bp
atgaatcaccgcatccagccgatggcatatacattcttaaaaatccccgtttcgcctact
caatgtgaagatgaaaaggaggaagacctttatgatgacccacttctacttaatgaatat
tctcagggtaaaaaggcgggtggacgaggggagtacatgaaacgagctagtttagcaacc
gatcaggcacaagagctcagcactgattctcaaaggatgtcattttcacacctgagaatg
tatatggtgatggtgggcacaagcacctttccttattctgggctgaaagagccaaaatat
gtgtatgtcagaagcctccagctccttgatgaagagctgattcttgcaccaaaattaagc
tgcagtgtcagctgctgcagcagcaaagaagccaggagggttgagctgcagaaggcagca
acctgctcagggctctggcatagcaccaaagccaaggccaacacactctctctcaatcgt
ttgtggaagagcacatctggatgtgtgggtattcctaaatcctcctccaggaaagatttc
aaagaaaggatctgtgttcctgaatacaagcagacctgttataccacacccttcacgacc
tggcttctgcctttgtctctggctcctgcctcatttctcgttagaggaggacagaccaaa
gctggtagatctgctgaggttctcagggatctaggctatgtccaactcaccactctgaca
tccctaggatgtggctcttgtatttatggtccaagaaggcaaatgtcacatccagtttat
agcagcaagaagaacctagaaacaaaggagcagagagggaaaggccatggggcacacagt
gagaagggggccatctgcaggccaggaagaaggccctcaccagaacccgaccatgctggc
acactgacctgggacttgcggcctccagaactgtga

>gi568815587r:107607838_107807930|GENSCAN_predicted_peptide_3|164_aa
MNNFIEIFSQKTNLIDKISWRIFKEEREYFDEMKEYGPIHILWLVSEEDLVDTLKDVDSC
IDRCCKATEKWKSGLSEALLPVVHEYVLYSEMLMGVMKRRDQIQAELDSKVEALTYKKTD
SDLLTEEIGKLEDKVEYVNNALKAEWERWQQNMQNDIVSIYRYG

>gi568815587r:107607838_107807930|GENSCAN_predicted_CDS_3|495_bp
atgaataactttattgaaatttttagccagaaaacaaatttgatagataaaatatcttgg
agaattttcaaggaagaaagggaatattttgatgaaatgaaagaatatggtccaattcat
attctgtggttagtgtcagaagaggatctggttgatactctaaaagatgttgacagctgc
attgacagatgctgtaaggccactgaaaaatggaagtctggactctcagaggccctgctt
cctgttgtacatgagtacgtgctttatagtgaaatgttaatgggtgttatgaaaagaaga
gaccaaatacaagcagaactggattccaaagttgaagctttgacctataaaaagacagat
agtgatctgcttacagaggagattggaaaacttgaagataaagtagaatatgttaataat
gccctgaaagcagaatgggaaagatggcaacaaaatatgcaaaatgatatcgttagcatt
tacagatatggctga

>gi568815587r:107607838_107807930|GENSCAN_predicted_peptide_4|172_aa
MGLLVEVLALDEDEDDLEVFSNYASLMDMNSFSTMMPTSPLSMINQIKFEDERDLKEHFI
TVDKPESYVTTIETFITYSIITKSSCGEFDSSEFEVRRRYQGFLWLKRKLEEAQPTLNIP
PFPEKFIVKGMVEHFKDDFIETCRKALHKFLSRTADHPTLTFNKVFKIFLTA

>gi568815587r:107607838_107807930|GENSCAN_predicted_CDS_4|519_bp
atggggctcttggtggaggtgctggctctggacgaggacgaggatgacctggaggttttc
agcaactatgcctcactgatggacatgaattccttcagcactatgatgccaacatcccct
ttatcaatgataaaccaaatcaagtttgaagatgaacgagatttaaaggaacacttcatt
acagttgataaacctgaaagttatgttactacaatagaaactttcattacgtatagcatt
attactaagtcatcttgtggagaatttgactccagtgaatttgaagttaggagacggtat
caaggtttcctttggttgaagagaaaacttgaagaagcacaacccactctgaatattcca
ccatttccagaaaaatttatagtaaaaggaatggtggaacactttaaagatgacttcatt
gagacatgcaggaaggctttacataaatttttgagccgaactgctgatcatccaacttta
acatttaataaggtcttcaaaatttttctcactgcataa

>gi568815587r:107607838_107807930|GENSCAN_predicted_peptide_5|406_aa
MASSFTYVAAKNMISLLLWLHSEMGKVPLSPSQGVRWGCDSLLQCPAAQTSMGGMQTGRL
WGSDPKAVSRGQRAFCIPGFLPWCTGRIGSHVGLETEYKVLLSGSSSQQLGEPEGRWFSP
GIWPFSSAGSPPPTLSKLHVLPVDGLLTCRRLSVGNLGCTQLKSSGNCLLPSRAEEVTVP
VSLISQEGSPGFVHMAAGEFPRFLKMVCPEFVPSDVQMCPEFIPSGGFTVLLSSGVKPQT
FAVSVTALKGGVSRVVRSSWWVRGLADFRSKAADLHTNIMLNEEKLKTFPLTTGTRQGCT
LSPLLFNLVLEILARAIRQEKEIKGIQISEEEVKLSLFADYMIIYLENPKDSCRKLLELT
KEFCEVSGYKINVCKSVALLYTNSDQAENQSKSSTPFTIAEKRRNT

>gi568815587r:107607838_107807930|GENSCAN_predicted_CDS_5|1221_bp
atggcctctagcttcacctacgttgctgcaaagaacatgatctcactgcttttatggctt
catagtgaaatgggaaaagttcccttgtccccctcgcagggtgtgcgatggggatgtgac
tcgcttcttcagtgtcccgctgctcaaacctctatggggggcatgcagacgggcaggctg
tggggctccgaccccaaggcagtgtctaggggacagagggctttctgtatccctgggttc
ttgccttggtgtactggaagaatcggatcacacgtgggcttggagactgagtacaaggtt
ttgttgagtggaagtagctctcagcagttgggggagccagaagggagatggttttcccct
ggaatctggccattcagcagcgcaggctctcctcctccgaccctgtccaaactccatgtt
ctgccggtcgatggcctgctgacctgccggcgtctgtcggttggcaatttgggctgcact
cagctgaagagttctgggaattgtctactgccatctagagctgaggaggtaacagtgcca
gtgtctctcattagccaggagggtagcccaggctttgttcacatggcagcaggcgagttc
ccaaggttcttaaagatggtgtgtccggagtttgttccttcagatgttcagatgtgccca
gagtttattccttctggtgggttcacggtcttgctgtcttcaggagtgaagccacagacc
tttgcagtgagtgttacagctcttaaaggtggcgtgtccagagttgttcgttcttcctgg
tgggttcgtggtcttgctgacttcaggagtaaagccgcagaccttcacaccaacataatg
ctgaatgaggaaaagttgaaaacattccctttgacaaccggaacgagacaaggatgcaca
ctctcaccactccttttcaacttagtactggaaattctagccagagcaatcagacaagag
aaagaaataaagggcatccaaatcagtgaagaggaagtcaaactgtcactgtttgctgac
tatatgatcatttaccttgaaaaccctaaagactcctgcagaaagctcctagaactgacg
aaagaattctgtgaagtttctggatacaagattaatgtatgcaaatcagtagctcttcta
tataccaacagtgaccaagcagagaatcaaagcaagagctcaaccccttttacaatagct
gaaaaaagaagaaatacttag

>gi568815587r:107607838_107807930|GENSCAN_predicted_peptide_6|236_aa
LLDCFGIPVLMALSWFILHARYRVIHFIAVAVCLLGVGTMVGADILAGREDNSGSDVLIG
DILVLLGASLYAISNVCEEYIVKKLSRQEFLGMVGLFGTIISGIQLLIVEYKDIASIHWD
WKIALLFVAFALCMFCLYSFMPLVIKVTSATSVNLGILTADLYSLFVGLFLFGYKFSGLY
ILSFTVIMVGFILYCSTPTRTAEPAESSVPPVTSIGIDNLGLKLEENLQETHSAVL

>gi568815587r:107607838_107807930|GENSCAN_predicted_CDS_6|711_bp
cttttggattgctttgggattcctgtgttgatggctctgtcatggtttattcttcatgca
agatacagagtgatccacttcatcgccgtggctgtctgtctgttgggtgtaggaaccatg
gttggtgcagacatactagcagggagggaagacaattcagggagtgatgtattgattggt
gacatcttggtccttcttggggcttccctctatgccatttcaaatgtttgtgaggaatac
atcgtgaagaagctgagcagacaggagtttttaggaatggtgggcctgtttggaacaatt
atcagtggtatacagctattgattgtggaatataaggatattgccagcattcattgggac
tggaaaattgccctgctgttcgtggcatttgccctgtgtatgttttgcctgtacagcttc
atgccattggtgattaaagtcactagtgccacttccgtcaacctgggcatcctgacagcg
gacctctacagcctttttgttggactctttctgtttggctataagttttcaggactctac
atcctgtccttcactgtcatcatggtggggtttatcctgtactgctccacccctactcgc
acggccgagccggctgaaagcagcgtgcctccagtcaccagcattgggattgacaacctg
gggctgaagctggaggagaacctccaggagacccactctgctgtcttgtag